AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene023996


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023996.t1 MTR_2g048580 57.853 382 115 11 1 378 1 340 3.89e-138 397
MS.gene023996.t1 MTR_7g079370 57.681 345 131 9 37 375 16 351 1.92e-122 358
MS.gene023996.t1 MTR_7g079420 69.455 275 46 4 105 378 905 1142 1.65e-116 365
MS.gene023996.t1 MTR_7g079400 56.209 306 108 11 78 375 45 332 1.05e-100 301
MS.gene023996.t1 MTR_8g102520 48.438 384 128 15 1 378 1 320 1.07e-93 283
MS.gene023996.t1 MTR_3g034130 43.646 362 177 11 3 352 4 350 1.83e-86 266
MS.gene023996.t1 MTR_4g109270 45.619 388 175 14 1 378 1 362 2.89e-86 266
MS.gene023996.t1 MTR_6g060650 44.416 394 180 15 1 378 1 371 5.30e-85 263
MS.gene023996.t1 MTR_3g103020 42.636 387 190 14 1 378 13 376 8.40e-84 260
MS.gene023996.t1 MTR_4g109280 45.337 386 174 15 1 378 1 357 2.24e-82 256
MS.gene023996.t1 MTR_3g034180 42.455 391 194 14 1 378 115 487 4.22e-81 256
MS.gene023996.t1 MTR_4g094365 41.192 386 195 13 1 378 1 362 2.28e-79 248
MS.gene023996.t1 MTR_4g023080 41.344 387 183 14 1 378 1 352 1.48e-78 246
MS.gene023996.t1 MTR_5g070080 41.235 405 186 16 2 378 4 384 6.35e-78 245
MS.gene023996.t1 MTR_3g034160 41.538 390 197 12 1 377 1 372 7.03e-78 244
MS.gene023996.t1 MTR_1g055135 41.470 381 195 12 7 378 12 373 6.19e-77 242
MS.gene023996.t1 MTR_4g118380 44.355 372 167 13 1 349 1 355 1.39e-76 241
MS.gene023996.t1 MTR_5g070130 42.159 389 188 14 1 374 4 370 6.44e-76 240
MS.gene023996.t1 MTR_4g116330 42.746 386 186 16 2 377 17 377 5.23e-75 237
MS.gene023996.t1 MTR_4g117770 42.893 394 180 13 1 378 1 365 5.24e-75 237
MS.gene023996.t1 MTR_4g117810 42.893 394 180 13 1 378 1 365 5.24e-75 237
MS.gene023996.t1 MTR_4g021785 39.323 384 196 11 1 378 1 353 3.05e-74 234
MS.gene023996.t1 MTR_5g070088 38.903 401 193 12 3 374 2 379 2.81e-73 233
MS.gene023996.t1 MTR_4g117780 40.409 391 194 12 1 378 1 365 1.02e-72 231
MS.gene023996.t1 MTR_5g097210 42.105 380 192 12 2 376 3 359 5.97e-72 229
MS.gene023996.t1 MTR_8g433040 40.838 382 188 15 3 378 13 362 1.05e-71 228
MS.gene023996.t1 MTR_8g032380 40.838 382 188 15 3 378 13 362 1.05e-71 228
MS.gene023996.t1 MTR_4g023090 38.636 396 201 12 2 378 10 382 1.22e-71 229
MS.gene023996.t1 MTR_4g117720 41.558 385 159 16 1 375 44 372 1.22e-71 229
MS.gene023996.t1 MTR_4g117850 41.379 377 186 15 7 373 22 373 2.19e-71 228
MS.gene023996.t1 MTR_4g023070 38.832 394 190 15 8 378 3 368 5.02e-71 227
MS.gene023996.t1 MTR_4g122850 41.622 370 181 17 19 375 12 359 2.51e-69 223
MS.gene023996.t1 MTR_4g023120 38.734 395 189 15 8 378 3 368 3.13e-69 222
MS.gene023996.t1 MTR_4g023130 38.701 385 155 14 1 378 1 311 7.66e-69 219
MS.gene023996.t1 MTR_8g032390 40.212 378 177 15 3 374 35 369 9.19e-68 218
MS.gene023996.t1 MTR_4g117750 42.268 388 174 17 6 376 1 355 7.33e-67 219
MS.gene023996.t1 MTR_4g117750 38.849 139 72 5 250 378 346 481 2.27e-15 77.8
MS.gene023996.t1 MTR_4g023190 40.310 387 192 12 1 378 1 357 3.71e-66 214
MS.gene023996.t1 MTR_8g013010 44.718 284 133 11 1 281 47 309 1.75e-63 206
MS.gene023996.t1 MTR_4g023150 39.018 387 198 12 1 378 1 358 1.11e-62 205
MS.gene023996.t1 MTR_4g023440 39.075 389 160 17 2 378 7 330 4.35e-62 202
MS.gene023996.t1 MTR_4g116330 39.740 385 160 16 2 377 17 338 1.06e-61 202
MS.gene023996.t1 MTR_4g023380 35.381 407 192 12 2 378 10 375 8.66e-61 201
MS.gene023996.t1 MTR_5g069120 55.367 177 78 1 18 193 1 177 6.51e-60 192
MS.gene023996.t1 MTR_4g023200 39.018 387 198 12 1 378 1 358 6.30e-59 195
MS.gene023996.t1 MTR_8g098830 56.818 176 65 6 182 353 32 200 7.65e-54 178
MS.gene023996.t1 MTR_4g121580 37.151 358 172 15 1 345 1 318 5.19e-51 175
MS.gene023996.t1 MTR_8g433030 37.302 378 155 18 3 374 35 336 8.68e-51 173
MS.gene023996.t1 MTR_4g117870 37.500 312 136 9 69 376 7 263 7.97e-48 163
MS.gene023996.t1 MTR_1g055195 38.835 309 149 12 79 377 197 475 8.34e-47 166
MS.gene023996.t1 MTR_4g118400 38.909 275 115 10 104 374 69 294 1.82e-46 160
MS.gene023996.t1 MTR_1g055165 32.086 374 186 9 7 378 9 316 2.77e-44 155
MS.gene023996.t1 MTR_4g118370 42.424 264 109 11 118 377 33 257 3.30e-43 151
MS.gene023996.t1 MTR_1g055175 43.500 200 98 6 185 378 9 199 1.07e-42 148
MS.gene023996.t1 MTR_4g116340 40.000 250 116 9 1 244 26 247 2.08e-42 149
MS.gene023996.t1 MTR_7g079450 59.722 144 44 7 239 378 2 135 7.73e-41 141
MS.gene023996.t1 MTR_4g116320 41.818 220 116 6 160 377 46 255 1.54e-38 139
MS.gene023996.t1 MTR_4g107820 31.496 381 214 17 8 372 36 385 3.26e-35 133
MS.gene023996.t1 MTR_4g107780 31.496 381 214 17 8 372 36 385 3.26e-35 133
MS.gene023996.t1 MTR_4g107820 31.496 381 214 17 8 372 36 385 4.45e-35 133
MS.gene023996.t1 MTR_4g107780 31.496 381 214 17 8 372 36 385 4.98e-35 133
MS.gene023996.t1 MTR_1g055250 39.524 210 110 7 147 352 46 242 5.54e-35 131
MS.gene023996.t1 MTR_4g117530 36.154 260 107 9 123 378 47 251 4.05e-34 127
MS.gene023996.t1 MTR_0115s0020 30.091 329 200 13 8 315 10 329 8.10e-32 124
MS.gene023996.t1 MTR_8g040935 36.816 201 112 6 185 378 14 206 1.45e-31 119
MS.gene023996.t1 MTR_6g463430 40.306 196 104 8 185 378 16 200 2.24e-31 118
MS.gene023996.t1 MTR_5g022420 31.270 307 172 12 7 308 26 298 3.89e-31 122
MS.gene023996.t1 MTR_3g036290 28.446 341 196 13 8 337 22 325 5.98e-31 121
MS.gene023996.t1 MTR_0064s0160 29.429 350 208 13 4 326 38 375 2.67e-30 120
MS.gene023996.t1 MTR_4g114700 35.424 271 109 10 106 371 9 218 3.26e-30 116
MS.gene023996.t1 MTR_4g133170 27.393 303 191 10 8 304 4 283 1.36e-29 118
MS.gene023996.t1 MTR_4g117430 45.695 151 52 7 113 260 11 134 1.57e-29 112
MS.gene023996.t1 MTR_2g021150 28.824 340 201 16 7 329 13 328 4.22e-29 116
MS.gene023996.t1 MTR_4g108820 32.797 311 146 15 7 314 41 291 4.58e-28 112
MS.gene023996.t1 MTR_5g057710 26.384 307 190 10 8 305 46 325 4.64e-28 114
MS.gene023996.t1 MTR_3g007330 28.296 311 174 12 8 305 48 322 1.00e-27 113
MS.gene023996.t1 MTR_5g057690 27.129 317 193 13 8 318 46 330 2.37e-27 111
MS.gene023996.t1 MTR_5g057790 27.492 331 184 13 8 318 46 340 3.46e-27 111
MS.gene023996.t1 MTR_7g117720 40.092 217 92 11 1 209 1 187 3.73e-27 108
MS.gene023996.t1 MTR_7g117720 32.301 226 115 9 181 375 54 272 6.97e-13 68.6
MS.gene023996.t1 MTR_3g007360 29.373 303 182 12 11 305 55 333 4.54e-27 111
MS.gene023996.t1 MTR_4g055060 29.677 310 183 15 8 305 30 316 5.35e-27 110
MS.gene023996.t1 MTR_3g007410 29.703 303 181 12 11 305 55 333 7.08e-27 110
MS.gene023996.t1 MTR_1g094210 28.250 400 194 18 8 372 57 398 9.62e-27 110
MS.gene023996.t1 MTR_1g097560 30.892 314 177 16 8 315 36 315 1.05e-26 109
MS.gene023996.t1 MTR_6g065980 31.373 306 162 17 8 305 16 281 1.44e-26 109
MS.gene023996.t1 MTR_1g094210 28.533 375 178 17 8 347 57 376 4.57e-26 108
MS.gene023996.t1 MTR_3g014540 31.210 314 168 16 8 305 29 310 4.66e-26 108
MS.gene023996.t1 MTR_3g006670 31.494 308 176 14 8 305 49 331 6.74e-26 108
MS.gene023996.t1 MTR_1g055070 29.670 273 153 12 8 258 49 304 1.56e-25 106
MS.gene023996.t1 MTR_3g009310 29.126 309 179 10 8 305 42 321 2.66e-25 106
MS.gene023996.t1 MTR_8g467140 31.975 319 179 16 6 314 30 320 3.33e-25 104
MS.gene023996.t1 MTR_5g048160 28.349 321 199 10 8 304 4 317 3.89e-25 105
MS.gene023996.t1 MTR_5g057020 26.349 315 193 12 8 318 46 325 4.08e-25 105
MS.gene023996.t1 MTR_4g061340 30.063 316 172 12 8 305 26 310 8.18e-25 104
MS.gene023996.t1 MTR_1g050542 29.276 304 180 10 8 306 58 331 8.76e-25 104
MS.gene023996.t1 MTR_3g009240 28.302 318 166 12 8 305 36 311 1.62e-24 103
MS.gene023996.t1 MTR_2g055970 30.105 382 222 18 6 372 209 560 1.91e-24 105
MS.gene023996.t1 MTR_7g070830 26.627 338 194 11 8 305 21 344 2.45e-24 103
MS.gene023996.t1 MTR_2g426090 27.019 322 190 12 6 304 5 304 2.00e-23 101
MS.gene023996.t1 MTR_3g013740 28.660 321 179 15 8 305 44 337 2.08e-23 100
MS.gene023996.t1 MTR_5g011200 27.796 313 180 16 8 304 17 299 2.14e-23 100
MS.gene023996.t1 MTR_2g028130 27.747 364 192 16 8 329 5 339 2.60e-23 100
MS.gene023996.t1 MTR_2g025420 27.123 365 219 14 8 339 6 356 2.71e-23 100
MS.gene023996.t1 MTR_3g014570 28.931 318 188 12 8 311 29 322 2.79e-23 100
MS.gene023996.t1 MTR_1g068875 25.329 304 197 7 8 304 4 284 2.84e-23 100
MS.gene023996.t1 MTR_0267s0050 27.245 323 190 9 8 305 7 309 3.04e-23 100
MS.gene023996.t1 MTR_3g013770 31.193 327 155 15 8 305 33 318 3.96e-23 100
MS.gene023996.t1 MTR_7g070440 28.923 325 179 16 5 305 4 300 6.05e-23 99.4
MS.gene023996.t1 MTR_5g007610 26.384 307 199 11 8 304 41 330 6.33e-23 99.8
MS.gene023996.t1 MTR_3g007270 28.483 323 173 18 8 304 47 337 6.69e-23 99.8
MS.gene023996.t1 MTR_7g067680 28.707 317 166 11 8 312 49 317 7.10e-23 99.4
MS.gene023996.t1 MTR_1g115160 26.733 303 189 9 6 305 20 292 7.47e-23 99.0
MS.gene023996.t1 MTR_2g425980 27.619 315 197 9 8 304 5 306 7.51e-23 99.4
MS.gene023996.t1 MTR_2g028140 27.545 334 182 14 8 304 5 315 7.69e-23 99.4
MS.gene023996.t1 MTR_2g028160 28.793 323 188 14 8 304 5 311 8.37e-23 99.4
MS.gene023996.t1 MTR_7g055930 29.915 351 183 20 1 305 6 339 9.88e-23 99.4
MS.gene023996.t1 MTR_2g021155 27.457 346 213 12 11 343 39 359 1.14e-22 100
MS.gene023996.t1 MTR_7g070880 26.757 370 208 15 8 329 21 375 1.23e-22 99.0
MS.gene023996.t1 MTR_3g011100 28.846 312 180 15 8 304 235 519 2.65e-22 99.0
MS.gene023996.t1 MTR_7g055870 30.484 351 181 21 1 305 6 339 2.86e-22 97.8
MS.gene023996.t1 MTR_7g066000 29.429 350 207 17 6 329 23 358 5.21e-22 97.1
MS.gene023996.t1 MTR_7g407070 27.500 320 191 13 8 305 32 332 6.51e-22 96.7
MS.gene023996.t1 MTR_3g083010 28.313 332 181 12 8 304 6 315 6.54e-22 96.7
MS.gene023996.t1 MTR_3g013950 26.235 324 198 9 6 305 5 311 7.33e-22 96.3
MS.gene023996.t1 MTR_7g091630 29.217 332 178 19 6 304 30 337 9.65e-22 96.7
MS.gene023996.t1 MTR_3g007430 26.214 309 183 10 11 305 46 323 9.88e-22 95.9
MS.gene023996.t1 MTR_8g101580 30.341 323 164 17 8 308 45 328 1.45e-21 95.5
MS.gene023996.t1 MTR_1g068835 25.407 307 194 9 8 304 4 285 1.55e-21 95.5
MS.gene023996.t1 MTR_2g426070 28.840 319 186 15 9 304 7 307 1.65e-21 95.5
MS.gene023996.t1 MTR_1g054575 27.723 303 186 9 8 305 52 326 1.73e-21 96.7
MS.gene023996.t1 MTR_4g109290 38.506 174 72 7 7 179 8 147 1.76e-21 91.3
MS.gene023996.t1 MTR_7g066100 26.471 408 244 15 4 374 7 395 2.11e-21 95.1
MS.gene023996.t1 MTR_2g046920 28.344 314 188 14 4 308 20 305 2.65e-21 94.7
MS.gene023996.t1 MTR_1g061330 22.955 379 253 9 8 373 4 356 3.98e-21 94.4
MS.gene023996.t1 MTR_1g097330 29.167 312 172 11 8 305 16 292 4.41e-21 94.4
MS.gene023996.t1 MTR_2g426020 27.273 319 187 14 8 304 6 301 5.05e-21 94.0
MS.gene023996.t1 MTR_0667s0010 25.705 319 191 10 8 304 6 300 6.17e-21 94.0
MS.gene023996.t1 MTR_4g031770 25.472 318 188 14 8 309 4 288 7.27e-21 93.2
MS.gene023996.t1 MTR_3g006570 26.452 310 194 12 8 309 21 304 7.43e-21 93.2
MS.gene023996.t1 MTR_7g056503 27.885 312 200 12 7 304 20 320 8.82e-21 93.2
MS.gene023996.t1 MTR_0128s0020 29.042 334 182 14 5 309 15 322 9.03e-21 93.2
MS.gene023996.t1 MTR_1g097490 28.346 381 218 19 8 372 49 390 1.28e-20 92.8
MS.gene023996.t1 MTR_7g062100 29.102 323 176 13 8 305 24 318 1.31e-20 92.8
MS.gene023996.t1 MTR_2g028110 25.360 347 221 10 8 340 4 326 1.32e-20 92.8
MS.gene023996.t1 MTR_3g010390 27.215 316 194 11 8 305 33 330 1.46e-20 92.8
MS.gene023996.t1 MTR_2g029990 26.797 306 191 14 9 305 52 333 1.53e-20 92.8
MS.gene023996.t1 MTR_4g070550 26.462 325 191 14 8 304 5 309 1.71e-20 92.4
MS.gene023996.t1 MTR_1g056710 30.224 268 142 12 8 258 34 273 1.84e-20 92.4
MS.gene023996.t1 MTR_2g024110 24.929 353 215 14 8 339 4 327 1.98e-20 92.0
MS.gene023996.t1 MTR_6g021880 28.226 372 228 18 19 372 31 381 2.41e-20 92.0
MS.gene023996.t1 MTR_2g021190 27.869 305 191 14 8 305 21 303 2.69e-20 91.7
MS.gene023996.t1 MTR_0044s0300 25.796 314 180 12 8 305 38 314 3.38e-20 91.7
MS.gene023996.t1 MTR_2g031680 26.316 304 194 9 8 304 6 286 4.14e-20 91.3
MS.gene023996.t1 MTR_2g021050 27.922 308 178 11 8 304 5 279 4.24e-20 91.3
MS.gene023996.t1 MTR_3g083640 25.566 309 185 12 8 305 55 329 4.24e-20 91.3
MS.gene023996.t1 MTR_3g010970 27.508 309 166 13 11 305 51 315 1.11e-19 90.1
MS.gene023996.t1 MTR_0649s0020 25.061 407 233 15 8 372 11 387 1.41e-19 89.7
MS.gene023996.t1 MTR_7g056290 26.816 358 183 12 8 320 22 345 1.47e-19 90.1
MS.gene023996.t1 MTR_3g436150 26.730 318 190 13 8 305 32 326 1.54e-19 89.7
MS.gene023996.t1 MTR_3g010430 26.168 321 183 13 8 309 36 321 1.56e-19 89.7
MS.gene023996.t1 MTR_7g007300 26.748 329 185 16 5 318 100 387 1.75e-19 90.1
MS.gene023996.t1 MTR_2g461450 26.888 331 198 12 6 330 16 308 2.20e-19 89.0
MS.gene023996.t1 MTR_7g066030 26.575 365 214 14 1 329 14 360 2.77e-19 89.0
MS.gene023996.t1 MTR_1g088120 27.381 336 185 11 6 305 8 320 3.24e-19 89.0
MS.gene023996.t1 MTR_3g010870 26.578 301 191 10 8 305 37 310 4.22e-19 88.2
MS.gene023996.t1 MTR_3g072470 27.479 353 186 13 8 320 19 341 4.37e-19 88.6
MS.gene023996.t1 MTR_3g036430 24.834 302 178 10 8 309 20 272 4.51e-19 87.8
MS.gene023996.t1 MTR_4g118360 41.732 127 65 4 254 376 1 122 4.71e-19 82.8
MS.gene023996.t1 MTR_3g023930 27.687 307 166 13 8 305 34 293 5.19e-19 87.8
MS.gene023996.t1 MTR_3g024110 25.392 319 178 12 8 309 101 376 7.24e-19 88.2
MS.gene023996.t1 MTR_0128s0070 27.976 336 192 13 6 317 20 329 8.54e-19 87.4
MS.gene023996.t1 MTR_5g027330 25.625 320 188 12 12 305 44 339 9.31e-19 87.8
MS.gene023996.t1 MTR_3g036335 25.707 389 230 18 8 372 41 394 1.01e-18 87.4
MS.gene023996.t1 MTR_0760s0010 27.707 314 178 16 13 315 52 327 1.01e-18 87.4
MS.gene023996.t1 MTR_2g426060 25.617 324 191 12 8 304 6 306 1.06e-18 87.4
MS.gene023996.t1 MTR_1g054725 25.964 389 233 19 7 372 19 375 1.08e-18 87.0
MS.gene023996.t1 MTR_4g013180 25.444 338 208 11 7 318 10 329 1.09e-18 87.8
MS.gene023996.t1 MTR_2g078900 26.398 322 167 14 8 305 33 308 1.09e-18 86.7
MS.gene023996.t1 MTR_5g027370 25.625 320 188 12 12 305 33 328 1.20e-18 87.4
MS.gene023996.t1 MTR_7g057270 27.711 332 182 14 8 305 26 333 1.51e-18 87.0
MS.gene023996.t1 MTR_7g013590 29.412 306 180 14 11 305 39 319 1.91e-18 86.7
MS.gene023996.t1 MTR_8g099460 25.588 340 210 11 6 330 3 314 2.08e-18 86.3
MS.gene023996.t1 MTR_2g104340 25.060 415 238 15 2 373 8 392 2.18e-18 86.3
MS.gene023996.t1 MTR_3g010920 26.433 314 163 15 8 305 44 305 2.92e-18 85.9
MS.gene023996.t1 MTR_1g112930 26.498 317 197 13 8 317 25 312 2.94e-18 85.9
MS.gene023996.t1 MTR_2g066200 23.775 408 246 16 2 373 6 384 4.52e-18 85.5
MS.gene023996.t1 MTR_8g062660 26.911 327 182 16 2 304 16 309 4.53e-18 86.3
MS.gene023996.t1 MTR_6g027910 28.086 324 199 17 11 318 12 317 4.72e-18 85.1
MS.gene023996.t1 MTR_3g010520 28.000 300 175 12 8 305 25 285 5.04e-18 84.7
MS.gene023996.t1 MTR_3g011060 26.266 316 191 14 8 305 28 319 5.11e-18 85.1
MS.gene023996.t1 MTR_4g030830 24.251 334 196 11 2 304 3 310 6.07e-18 85.1
MS.gene023996.t1 MTR_2g047832 27.356 329 192 14 4 308 25 330 6.29e-18 85.1
MS.gene023996.t1 MTR_7g077970 29.143 350 185 16 8 315 7 335 6.55e-18 85.1
MS.gene023996.t1 MTR_2g031640 25.974 308 193 14 8 304 6 289 8.25e-18 84.3
MS.gene023996.t1 MTR_7g078040 27.485 342 190 15 6 305 7 332 9.15e-18 84.7
MS.gene023996.t1 MTR_3g030350 26.513 347 216 13 8 343 35 353 1.04e-17 84.3
MS.gene023996.t1 MTR_7g028660 26.994 326 185 15 6 304 9 308 1.05e-17 84.3
MS.gene023996.t1 MTR_5g023000 46.316 95 46 2 287 378 5 97 1.29e-17 77.8
MS.gene023996.t1 MTR_2g025960 27.149 221 130 8 101 304 3 209 1.31e-17 83.2
MS.gene023996.t1 MTR_4g122860 31.500 200 88 9 190 378 157 318 1.66e-17 83.2
MS.gene023996.t1 MTR_2g021252 25.084 299 185 10 11 304 50 314 1.77e-17 83.6
MS.gene023996.t1 MTR_2g066170 22.084 403 253 16 2 371 6 380 2.22e-17 83.2
MS.gene023996.t1 MTR_5g096630 25.714 420 243 19 2 373 12 410 2.24e-17 83.6
MS.gene023996.t1 MTR_6g004660 28.481 316 186 15 8 305 16 309 2.40e-17 83.2
MS.gene023996.t1 MTR_4g028510 28.274 336 199 16 2 305 7 332 2.41e-17 83.6
MS.gene023996.t1 MTR_8g039500 25.455 330 192 13 2 305 6 307 2.42e-17 82.8
MS.gene023996.t1 MTR_2g031720 26.791 321 178 14 8 304 6 293 2.71e-17 83.2
MS.gene023996.t1 MTR_4g019990 26.409 337 180 15 6 304 4 310 2.75e-17 83.2
MS.gene023996.t1 MTR_3g011120 28.485 330 181 18 2 304 8 309 3.11e-17 82.8
MS.gene023996.t1 MTR_5g096710 25.294 340 197 15 6 315 21 333 3.50e-17 82.8
MS.gene023996.t1 MTR_2g043400 25.758 330 187 9 8 305 23 326 3.89e-17 82.8
MS.gene023996.t1 MTR_4g023430 43.434 99 54 1 1 97 32 130 5.26e-17 79.7
MS.gene023996.t1 MTR_3g030250 23.779 307 187 10 8 305 37 305 5.29e-17 82.0
MS.gene023996.t1 MTR_5g022090 27.653 311 169 12 8 305 34 301 5.53e-17 82.0
MS.gene023996.t1 MTR_6g055210 26.250 320 204 8 7 305 21 329 5.61e-17 82.4
MS.gene023996.t1 MTR_0097s0030 26.444 329 177 12 6 304 12 305 5.62e-17 82.0
MS.gene023996.t1 MTR_2g047240 26.444 329 177 12 6 304 12 305 5.62e-17 82.0
MS.gene023996.t1 MTR_7g056390 25.568 352 195 12 8 320 18 341 6.15e-17 82.0
MS.gene023996.t1 MTR_0242s0060 26.866 335 188 12 6 305 7 319 7.65e-17 82.0
MS.gene023996.t1 MTR_0242s0040 26.866 335 188 12 6 305 7 319 7.65e-17 82.0
MS.gene023996.t1 MTR_4g030980 26.050 357 180 15 8 304 15 347 8.88e-17 81.6
MS.gene023996.t1 MTR_7g055977 26.380 326 184 11 6 305 5 300 8.88e-17 81.3
MS.gene023996.t1 MTR_2g046900 28.349 321 187 17 4 308 24 317 9.01e-17 81.6
MS.gene023996.t1 MTR_5g069760 25.786 318 192 11 6 305 4 295 1.06e-16 81.3
MS.gene023996.t1 MTR_7g066010 24.324 370 180 15 3 329 16 328 1.09e-16 81.3
MS.gene023996.t1 MTR_6g086825 25.728 412 247 20 7 378 69 461 1.10e-16 81.6
MS.gene023996.t1 MTR_7g060940 28.024 339 175 14 1 305 15 318 1.15e-16 81.3
MS.gene023996.t1 MTR_7g077070 24.779 339 210 12 1 305 9 336 1.19e-16 81.3
MS.gene023996.t1 MTR_2g046800 27.532 385 197 18 8 342 14 366 1.19e-16 81.3
MS.gene023996.t1 MTR_5g046300 24.679 312 184 15 8 305 4 278 1.34e-16 80.5
MS.gene023996.t1 MTR_5g046290 24.679 312 184 15 8 305 4 278 1.34e-16 80.5
MS.gene023996.t1 MTR_5g069930 25.938 320 194 13 6 305 4 300 1.35e-16 80.9
MS.gene023996.t1 MTR_4g031020 24.581 358 190 13 5 304 12 347 1.50e-16 81.3
MS.gene023996.t1 MTR_6g034720 43.902 123 57 5 129 250 53 164 1.52e-16 78.2
MS.gene023996.t1 MTR_6g007135 28.254 315 184 15 8 305 26 315 1.67e-16 80.9
MS.gene023996.t1 MTR_4g129160 27.941 340 181 17 8 305 7 324 1.69e-16 80.5
MS.gene023996.t1 MTR_1g055055 26.710 307 174 13 6 304 24 287 1.76e-16 80.1
MS.gene023996.t1 MTR_1g068860 23.585 318 220 8 6 319 2 300 1.88e-16 80.5
MS.gene023996.t1 MTR_6g090180 25.815 399 224 19 2 352 41 415 2.08e-16 80.9
MS.gene023996.t1 MTR_7g056760 25.610 328 196 16 6 305 21 328 2.48e-16 80.1
MS.gene023996.t1 MTR_7g055987 27.134 328 181 13 10 314 22 314 2.81e-16 79.7
MS.gene023996.t1 MTR_4g117550 26.536 407 226 20 2 378 11 374 2.94e-16 79.7
MS.gene023996.t1 MTR_8g073550 28.502 207 116 7 7 200 29 216 3.12e-16 77.8
MS.gene023996.t1 MTR_2g024100 26.284 331 195 13 14 323 14 316 3.22e-16 80.1
MS.gene023996.t1 MTR_4g028660 25.373 335 207 13 2 305 7 329 4.81e-16 79.3
MS.gene023996.t1 MTR_4g027450 25.373 335 207 13 2 305 7 329 4.81e-16 79.3
MS.gene023996.t1 MTR_3g006530 24.051 316 188 10 8 304 40 322 4.95e-16 79.3
MS.gene023996.t1 MTR_7g062060 24.405 336 206 12 3 305 7 327 5.49e-16 79.3
MS.gene023996.t1 MTR_4g129190 27.190 331 187 15 4 305 2 307 6.26e-16 79.0
MS.gene023996.t1 MTR_8g064890 25.823 395 247 15 2 370 7 381 6.30e-16 79.0
MS.gene023996.t1 MTR_3g024150 24.262 305 190 10 11 305 38 311 6.43e-16 79.0
MS.gene023996.t1 MTR_1g029650 23.582 335 198 10 1 305 1 307 6.68e-16 79.0
MS.gene023996.t1 MTR_3g030330 25.063 399 218 18 8 372 20 371 7.42e-16 78.6
MS.gene023996.t1 MTR_4g080200 27.152 302 179 11 8 297 3 275 7.49e-16 78.6
MS.gene023996.t1 MTR_2g047200 26.531 343 169 15 6 305 18 320 8.37e-16 78.6
MS.gene023996.t1 MTR_2g021800 24.641 418 248 16 7 375 15 414 8.66e-16 78.6
MS.gene023996.t1 MTR_6g053260 25.868 317 190 13 8 309 337 623 1.14e-15 79.0
MS.gene023996.t1 MTR_5g056020 26.627 338 193 15 8 305 17 339 1.19e-15 78.6
MS.gene023996.t1 MTR_6g053240 23.602 322 196 11 8 309 28 319 1.99e-15 77.4
MS.gene023996.t1 MTR_0128s0010 25.868 317 197 11 8 305 21 318 2.38e-15 77.4
MS.gene023996.t1 MTR_3g058480 27.612 268 154 12 8 258 39 283 2.39e-15 76.6
MS.gene023996.t1 MTR_3g030240 23.779 307 182 13 8 305 40 303 2.88e-15 77.0
MS.gene023996.t1 MTR_7g078860 25.549 364 189 13 3 319 4 332 3.25e-15 77.0
MS.gene023996.t1 MTR_4g055820 24.658 365 221 12 2 328 8 356 3.76e-15 76.3
MS.gene023996.t1 MTR_2g026010 25.649 308 198 11 8 304 4 291 3.79e-15 76.6
MS.gene023996.t1 MTR_4g024890 25.994 327 183 15 6 304 8 303 3.90e-15 76.6
MS.gene023996.t1 MTR_2g065860 22.936 327 213 9 2 304 6 317 4.15e-15 76.6
MS.gene023996.t1 MTR_5g009060 27.928 333 183 16 8 304 25 336 4.18e-15 76.6
MS.gene023996.t1 MTR_5g010660 24.765 319 177 12 8 305 34 310 4.67e-15 76.6
MS.gene023996.t1 MTR_6g017280 24.768 323 198 13 6 305 7 307 4.73e-15 76.3
MS.gene023996.t1 MTR_6g013270 26.774 310 190 15 8 305 29 313 4.88e-15 76.3
MS.gene023996.t1 MTR_4g014370 23.487 413 261 15 4 373 5 405 5.09e-15 76.3
MS.gene023996.t1 MTR_7g069550 27.114 402 210 24 1 350 5 375 5.37e-15 76.3
MS.gene023996.t1 MTR_0054s0090 23.430 414 243 17 7 373 16 402 6.79e-15 75.9
MS.gene023996.t1 MTR_7g022600 27.826 345 192 15 6 309 21 349 7.13e-15 75.9
MS.gene023996.t1 MTR_4g028680 24.927 341 202 13 2 305 7 330 7.45e-15 75.9
MS.gene023996.t1 MTR_5g068040 25.758 330 184 15 8 314 16 307 7.70e-15 75.5
MS.gene023996.t1 MTR_4g030090 26.316 323 189 15 8 304 14 313 7.94e-15 75.9
MS.gene023996.t1 MTR_4g102410 26.667 345 208 18 2 312 55 388 8.35e-15 75.9
MS.gene023996.t1 MTR_5g046260 24.252 301 169 14 8 305 4 248 8.70e-15 74.7
MS.gene023996.t1 MTR_7g056820 25.326 383 213 18 8 350 7 356 9.07e-15 75.5
MS.gene023996.t1 MTR_2g047892 26.205 332 180 15 6 304 20 319 1.31e-14 75.1
MS.gene023996.t1 MTR_1g442850 28.308 325 179 16 7 305 4 300 1.47e-14 74.7
MS.gene023996.t1 MTR_4g037465 25.602 332 177 13 8 305 21 316 1.76e-14 74.7
MS.gene023996.t1 MTR_5g069390 24.574 411 252 19 1 371 19 411 1.95e-14 75.1
MS.gene023996.t1 MTR_4g013185 26.286 350 183 13 6 305 8 332 1.96e-14 74.7
MS.gene023996.t1 MTR_6g016285 25.074 339 187 14 6 305 19 329 2.05e-14 74.7
MS.gene023996.t1 MTR_2g031700 26.104 249 161 9 8 254 6 233 2.31e-14 73.2
MS.gene023996.t1 MTR_0129s0050 25.298 419 244 17 2 373 8 404 2.38e-14 74.3
MS.gene023996.t1 MTR_4g030110 25.000 352 175 13 8 325 30 326 3.00e-14 73.9
MS.gene023996.t1 MTR_5g008530 63.043 46 17 0 8 53 18 63 3.63e-14 67.4
MS.gene023996.t1 MTR_7g061050 27.139 339 167 15 5 305 10 306 4.53e-14 73.2
MS.gene023996.t1 MTR_2g078850 25.566 309 183 15 11 305 33 308 4.67e-14 73.2
MS.gene023996.t1 MTR_7g016930 27.329 322 186 19 3 304 9 302 4.96e-14 72.8
MS.gene023996.t1 MTR_5g057040 26.512 215 133 7 8 214 46 243 5.42e-14 73.9
MS.gene023996.t1 MTR_5g097330 26.442 416 236 19 2 373 10 399 5.66e-14 73.2
MS.gene023996.t1 MTR_3g030310 25.153 326 175 15 8 305 21 305 7.03e-14 72.8
MS.gene023996.t1 MTR_5g037680 23.659 410 246 17 1 372 1 381 1.15e-13 72.4
MS.gene023996.t1 MTR_2g437110 27.356 329 181 16 6 305 20 319 1.33e-13 72.4
MS.gene023996.t1 MTR_0129s0070 24.515 412 251 20 2 378 11 397 1.43e-13 72.0
MS.gene023996.t1 MTR_1g007410 25.444 338 198 13 3 305 17 335 1.56e-13 71.6
MS.gene023996.t1 MTR_7g061060 25.152 330 188 12 5 305 10 309 1.79e-13 71.6
MS.gene023996.t1 MTR_8g041270 25.604 414 246 18 2 373 9 402 1.82e-13 71.6
MS.gene023996.t1 MTR_4g028750 23.140 363 223 16 6 337 14 351 2.09e-13 71.2
MS.gene023996.t1 MTR_0464s0020 24.857 350 199 13 6 314 21 347 2.10e-13 71.6
MS.gene023996.t1 MTR_7g066080 27.536 345 191 15 8 314 16 339 2.57e-13 71.2
MS.gene023996.t1 MTR_1g114700 23.794 311 195 11 8 304 29 311 2.61e-13 71.2
MS.gene023996.t1 MTR_5g075370 28.231 294 160 14 1 257 1 280 2.68e-13 72.0
MS.gene023996.t1 MTR_7g056200 24.786 351 181 12 5 319 20 323 3.01e-13 70.9
MS.gene023996.t1 MTR_2g021210 25.325 308 184 14 8 305 84 355 3.32e-13 70.9
MS.gene023996.t1 MTR_7g056797 25.705 319 203 14 6 304 21 325 3.97e-13 70.5
MS.gene023996.t1 MTR_8g467670 24.728 368 212 16 7 347 13 342 4.60e-13 70.5
MS.gene023996.t1 MTR_8g012090 24.921 317 184 12 7 305 15 295 6.49e-13 69.3
MS.gene023996.t1 MTR_7g055850 30.131 229 120 12 1 198 6 225 8.13e-13 68.6
MS.gene023996.t1 MTR_2g006360 26.230 305 158 14 5 305 43 284 8.99e-13 69.3
MS.gene023996.t1 MTR_2g043410 25.000 332 187 11 8 305 22 325 1.04e-12 69.3
MS.gene023996.t1 MTR_3g023940 27.273 319 174 15 8 305 34 315 1.11e-12 68.9
MS.gene023996.t1 MTR_1g055200 45.161 93 38 3 103 194 6 86 1.14e-12 64.3
MS.gene023996.t1 MTR_3g437520 24.157 356 197 14 6 314 21 350 1.37e-12 69.3
MS.gene023996.t1 MTR_1g047490 24.260 338 189 13 6 319 20 314 1.47e-12 68.2
MS.gene023996.t1 MTR_3g009300 25.497 302 163 11 11 305 37 283 1.57e-12 68.6
MS.gene023996.t1 MTR_7g078840 24.800 375 203 12 1 318 3 355 1.64e-12 68.9
MS.gene023996.t1 MTR_1g115185 25.949 316 185 15 7 305 38 321 1.73e-12 68.6
MS.gene023996.t1 MTR_3g030320 29.268 246 132 15 67 305 12 222 1.84e-12 67.8
MS.gene023996.t1 MTR_1g071010 25.153 326 189 15 8 305 15 313 2.06e-12 68.2
MS.gene023996.t1 MTR_3g011650 27.586 232 126 10 11 231 82 282 2.27e-12 67.4
MS.gene023996.t1 MTR_5g057643 26.271 236 127 9 8 226 46 251 2.60e-12 67.0
MS.gene023996.t1 MTR_7g060960 28.302 318 156 17 6 305 30 293 2.76e-12 67.8
MS.gene023996.t1 MTR_7g052150 26.140 329 180 16 6 305 20 314 2.82e-12 68.2
MS.gene023996.t1 MTR_3g009290 30.709 254 133 15 8 250 35 256 3.14e-12 66.6
MS.gene023996.t1 MTR_2g022000 23.724 392 237 15 7 350 15 392 3.19e-12 67.8
MS.gene023996.t1 MTR_4g013175 25.410 366 196 14 6 318 8 349 3.26e-12 67.8
MS.gene023996.t1 MTR_4g011660 25.989 354 175 17 6 305 17 337 3.58e-12 67.8
MS.gene023996.t1 MTR_7g052670 25.581 344 201 12 6 305 19 351 6.28e-12 67.0
MS.gene023996.t1 MTR_7g056003 25.369 339 194 12 8 314 15 326 7.48e-12 66.6
MS.gene023996.t1 MTR_3g024130 24.883 213 127 10 101 305 58 245 8.24e-12 65.9
MS.gene023996.t1 MTR_4g033495 27.356 329 180 15 8 305 27 327 1.05e-11 66.2
MS.gene023996.t1 MTR_7g061090 23.235 340 192 12 6 305 20 330 1.09e-11 66.2
MS.gene023996.t1 MTR_7g078050 35.115 131 67 6 6 124 4 128 1.14e-11 64.7
MS.gene023996.t1 MTR_3g010870 26.339 224 141 6 8 229 37 238 1.18e-11 65.5
MS.gene023996.t1 MTR_3g024040 24.832 298 179 13 15 304 38 298 1.27e-11 65.9
MS.gene023996.t1 MTR_1g037540 23.691 401 240 17 8 366 5 381 1.40e-11 65.9
MS.gene023996.t1 MTR_3g464500 24.484 339 203 14 6 318 25 336 1.63e-11 65.5
MS.gene023996.t1 MTR_6g017270 23.048 269 163 9 6 253 7 252 1.77e-11 65.1
MS.gene023996.t1 MTR_7g445750 25.926 324 197 13 6 300 21 330 1.87e-11 65.1
MS.gene023996.t1 MTR_5g094350 22.483 298 156 11 6 261 11 275 2.16e-11 64.3
MS.gene023996.t1 MTR_2g065840 24.699 332 200 16 2 304 6 316 2.17e-11 65.1
MS.gene023996.t1 MTR_3g058470 29.187 209 119 10 8 199 37 233 3.10e-11 64.7
MS.gene023996.t1 MTR_1g068905 26.277 274 154 9 8 273 4 237 3.23e-11 64.3
MS.gene023996.t1 MTR_5g023570 42.453 106 55 4 7 111 36 136 4.14e-11 60.8
MS.gene023996.t1 MTR_7g035295 23.939 330 172 12 6 305 14 294 4.19e-11 64.3
MS.gene023996.t1 MTR_3g058440 24.074 270 159 12 8 258 35 277 4.98e-11 63.5
MS.gene023996.t1 MTR_5g092850 24.878 410 245 18 7 376 15 401 7.07e-11 63.5
MS.gene023996.t1 MTR_0831s0010 24.938 405 230 21 7 373 49 417 8.74e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023996.t1 AT3G06240 27.778 342 187 12 4 305 32 353 9.08e-27 110
MS.gene023996.t1 AT4G22390 25.743 303 206 8 9 305 5 294 1.06e-24 104
MS.gene023996.t1 AT4G22390 25.743 303 206 8 9 305 5 294 1.21e-24 104
MS.gene023996.t1 AT4G12560 25.402 311 203 11 8 305 4 298 6.80e-23 99.8
MS.gene023996.t1 AT4G12560 25.402 311 203 11 8 305 4 298 6.80e-23 99.8
MS.gene023996.t1 AT4G12560 25.402 311 203 11 8 305 4 298 6.80e-23 99.8
MS.gene023996.t1 AT3G23880 26.437 348 212 13 8 341 14 331 2.29e-18 85.9
MS.gene023996.t1 AT5G49610 27.687 307 188 11 3 302 4 283 1.08e-16 80.9
MS.gene023996.t1 AT2G16810 27.519 258 163 11 7 259 40 278 1.27e-16 80.1
MS.gene023996.t1 AT3G07870 23.988 321 194 12 8 304 28 322 1.03e-14 75.5
MS.gene023996.t1 AT1G33530 25.478 314 175 14 6 304 95 364 2.77e-14 74.3
MS.gene023996.t1 AT1G50870 23.077 312 202 9 9 312 32 313 2.86e-14 73.9
MS.gene023996.t1 AT4G19940 23.684 304 200 9 8 293 35 324 2.96e-14 73.9
MS.gene023996.t1 AT4G19930 25.076 331 208 14 7 318 42 351 3.49e-14 73.9
MS.gene023996.t1 AT3G22720 23.179 302 207 10 8 303 5 287 6.70e-14 72.8
MS.gene023996.t1 AT1G11620 28.302 265 145 14 8 257 6 240 2.48e-13 70.9
MS.gene023996.t1 AT5G52610 29.545 220 128 8 8 226 2 195 3.25e-12 67.4
MS.gene023996.t1 AT5G65850 23.636 330 202 13 3 320 30 321 3.88e-12 67.4
MS.gene023996.t1 AT3G16210 26.190 252 152 11 7 257 4 222 7.88e-12 66.6
MS.gene023996.t1 AT3G17570 24.603 252 160 8 8 256 5 229 1.07e-11 66.2
MS.gene023996.t1 AT2G02030 24.211 285 170 9 2 257 33 300 2.09e-11 65.1
MS.gene023996.t1 AT1G53550 25.309 324 189 17 8 312 35 324 2.11e-11 65.5
MS.gene023996.t1 AT3G47150 50.794 63 29 1 5 65 9 71 2.89e-11 64.7
MS.gene023996.t1 AT1G12870 22.487 378 239 16 8 356 33 385 2.98e-11 65.1
MS.gene023996.t1 AT3G49980 23.828 256 169 10 8 257 5 240 3.11e-11 64.7
MS.gene023996.t1 AT3G49980 23.828 256 169 10 8 257 6 241 3.30e-11 64.7
MS.gene023996.t1 AT3G52320 25.591 254 165 7 8 257 27 260 3.67e-11 64.7
MS.gene023996.t1 AT3G22730 22.462 325 196 15 11 316 9 296 4.97e-11 63.9

Find 82 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATTGCCTTTGATTTAA+AGG 0.116438 7.1:+24650945 MS.gene023996:CDS
TTTGATGTATTGGTACTTAA+TGG 0.184691 7.1:+24651033 MS.gene023996:CDS
TGTTCTGATCCTGATATTAT+AGG 0.199846 7.1:+24650511 MS.gene023996:CDS
ATGCATTAAAATCTATTGTT+AGG 0.273972 7.1:-24650435 None:intergenic
ATGTAGAGGGTTTCTATTAT+TGG 0.282829 7.1:+24650537 MS.gene023996:CDS
TCTCATTGAAAGCTAATAAC+TGG 0.288898 7.1:+24650788 MS.gene023996:CDS
TGGTGTATGGATTTCAGATA+TGG 0.327075 7.1:+24651062 MS.gene023996:CDS
TTGGTACTTAATGGACTTAT+TGG 0.335883 7.1:+24651042 MS.gene023996:CDS
TCTATACCGGCAACAGTTAT+AGG 0.343376 7.1:-24650625 None:intergenic
ATTTCCTTTATCACATCTTC+AGG 0.350571 7.1:-24650250 None:intergenic
TGGACGAAACAGTTGAGATA+TGG 0.375897 7.1:+24651082 MS.gene023996:CDS
CTGCTAGAGCACCTCTATTA+TGG 0.378058 7.1:+24651261 MS.gene023996:CDS
TTAATGGACTTATTGGTGTA+TGG 0.382670 7.1:+24651049 MS.gene023996:CDS
TAATAACTGGAAACAAATTC+AGG 0.385142 7.1:+24650801 MS.gene023996:CDS
GAGTCGGGTTGTTCTTGAAT+GGG 0.385506 7.1:+24650878 MS.gene023996:CDS
CTACATGAACCTATAATATC+AGG 0.386021 7.1:-24650520 None:intergenic
GCAAGTGCGTTTGTAAGTTA+TGG 0.386070 7.1:+24650308 MS.gene023996:CDS
GGAAATCCTGCTGAGGTTGC+CGG 0.386944 7.1:+24650267 MS.gene023996:CDS
TCTTCCTGAAGATGTGATAA+AGG 0.387148 7.1:+24650246 MS.gene023996:CDS
CTCTCTCCTATAACTGTTGC+CGG 0.391676 7.1:+24650619 MS.gene023996:CDS
TCTTGAATGGGGCTATTCAT+TGG 0.397510 7.1:+24650890 MS.gene023996:CDS
GATCTAAAATCAAAATCATC+TGG 0.416107 7.1:-24650994 None:intergenic
ACTCTGTATATACGGCCATT+TGG 0.434308 7.1:-24651308 None:intergenic
TGCATTAAAATCTATTGTTA+GGG 0.436478 7.1:-24650434 None:intergenic
GGTTTCTCTCTCGTGATAAA+CGG 0.438600 7.1:-24651287 None:intergenic
ATCGCTGTCGGCATCTATAC+CGG 0.442746 7.1:-24650638 None:intergenic
AGAGTCGGGTTGTTCTTGAA+TGG 0.443451 7.1:+24650877 MS.gene023996:CDS
ATAGTCATCATCGCATTGAT+AGG 0.460659 7.1:-24650731 None:intergenic
TGTCATTTCCTTTAAATCAA+AGG 0.465778 7.1:-24650953 None:intergenic
ATAACCCATGCCTCTACCTA+TGG 0.469515 7.1:+24650563 MS.gene023996:CDS
ACCTCACCGGCAACCTCAGC+AGG 0.477525 7.1:-24650273 None:intergenic
GAGCAGGTAATAATCTCATA+AGG 0.480467 7.1:-24650838 None:intergenic
GGTGAGACCATTTGCAGAGC+AGG 0.483051 7.1:-24650854 None:intergenic
CTAGTTTATAACTATGAGAC+TGG 0.483134 7.1:+24650913 MS.gene023996:CDS
AAGCAGAGACTCTGTATATA+CGG 0.486825 7.1:-24651316 None:intergenic
AAACAATAGTCTTGAGGAGC+CGG 0.487443 7.1:-24651153 None:intergenic
AATATGCAGTGCATTCATCT+TGG 0.491707 7.1:+24651115 MS.gene023996:CDS
GGACGAAACAGTTGAGATAT+GGG 0.491745 7.1:+24651083 MS.gene023996:CDS
ACGAGCTGTGGTGATGTAGT+TGG 0.496242 7.1:+24651192 MS.gene023996:CDS
GATATCTAGCTCACTTGACT+TGG 0.501587 7.1:+24650759 MS.gene023996:CDS
ATTATTACCTGCTCTGCAAA+TGG 0.504484 7.1:+24650847 MS.gene023996:CDS
CAAATGGTCTCACCAGAGTC+GGG 0.510709 7.1:+24650863 MS.gene023996:CDS
GCAAATGGTCTCACCAGAGT+CGG 0.514245 7.1:+24650862 MS.gene023996:CDS
ACCGTCAACTGATGATTACT+TGG 0.516257 7.1:+24650696 MS.gene023996:CDS
TAAACTTAATCAGTGTCACT+TGG 0.517050 7.1:-24651345 None:intergenic
GATAAGCAGAATCATGATTG+AGG 0.517618 7.1:-24650459 None:intergenic
AAATGTGAATTTGCAAAATG+AGG 0.531218 7.1:-24650349 None:intergenic
TCCTGCTGAGGTTGCCGGTG+AGG 0.535788 7.1:+24650272 MS.gene023996:CDS
ATATTATAGGTTCATGTAGA+GGG 0.541395 7.1:+24650524 MS.gene023996:CDS
TCTATTGTTAGGGCTTTGAA+AGG 0.544037 7.1:-24650424 None:intergenic
GAAAATCACAAGTTTATGTG+TGG 0.546212 7.1:-24650389 None:intergenic
TACCTATGGAATCCCTCCAC+TGG 0.547529 7.1:+24650577 MS.gene023996:CDS
ATAAGCAGAATCATGATTGA+GGG 0.548392 7.1:-24650458 None:intergenic
ATTCAAGAACAACCCGACTC+TGG 0.551431 7.1:-24650875 None:intergenic
GATATTATAGGTTCATGTAG+AGG 0.556458 7.1:+24650523 MS.gene023996:CDS
TTGAAGAAGTTTAATAACAA+AGG 0.560618 7.1:+24651234 MS.gene023996:CDS
ATCACGAGAGAGAAACCAAA+TGG 0.562340 7.1:+24651293 MS.gene023996:CDS
AAAATCACAAGTTTATGTGT+GGG 0.563880 7.1:-24650388 None:intergenic
CTAGGATGCTTTACGAGCTG+TGG 0.564992 7.1:+24651180 MS.gene023996:CDS
GTAGTTGGAACAGATCTTCA+AGG 0.567449 7.1:+24651207 MS.gene023996:CDS
TGGAGGGATTCCATAGGTAG+AGG 0.567966 7.1:-24650573 None:intergenic
TTTATAACTATGAGACTGGA+AGG 0.569813 7.1:+24650917 MS.gene023996:CDS
AAACTTAATCAGTGTCACTT+GGG 0.575347 7.1:-24651344 None:intergenic
ACCAAGTAATCATCAGTTGA+CGG 0.580855 7.1:-24650697 None:intergenic
TTGTTTATTGACACCAGTGG+AGG 0.581446 7.1:-24650590 None:intergenic
TGTTTATTGACACCAGTGGA+GGG 0.582868 7.1:-24650589 None:intergenic
CTTGAGAATATAATCGCTGT+CGG 0.586330 7.1:-24650650 None:intergenic
AATGCGATGATGACTATGAT+CGG 0.595836 7.1:+24650737 MS.gene023996:CDS
ATAAACGGTGACCATAATAG+AGG 0.598685 7.1:-24651272 None:intergenic
AGTCGGGTTGTTCTTGAATG+GGG 0.602618 7.1:+24650879 MS.gene023996:CDS
ACCAATACATCAAAATCTAG+AGG 0.604826 7.1:-24651024 None:intergenic
TATTTGTTTATTGACACCAG+TGG 0.609119 7.1:-24650593 None:intergenic
AAGTTTATGTGTGGGTGATG+AGG 0.617493 7.1:-24650380 None:intergenic
CACCAGTGGAGGGATTCCAT+AGG 0.621693 7.1:-24650579 None:intergenic
GATTCCATAGGTAGAGGCAT+GGG 0.623678 7.1:-24650567 None:intergenic
GGATTCCATAGGTAGAGGCA+TGG 0.625255 7.1:-24650568 None:intergenic
GCAACAGTTATAGGAGAGAG+AGG 0.625386 7.1:-24650616 None:intergenic
CAACGAAGTACAGACCTCAC+CGG 0.646998 7.1:-24650286 None:intergenic
TTATAACTATGAGACTGGAA+GGG 0.648533 7.1:+24650918 MS.gene023996:CDS
GTTGGAACAGATCTTCAAGG+TGG 0.676978 7.1:+24651210 MS.gene023996:CDS
TGATAAAGGAAATCCTGCTG+AGG 0.709194 7.1:+24650260 MS.gene023996:CDS
ATATCAGGATCAGAACAGTG+AGG 0.781425 7.1:-24650505 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGCATTAAAATCTATTGTT+AGG - chr7.1:24650438-24650457 None:intergenic 20.0%
!! TGCATTAAAATCTATTGTTA+GGG - chr7.1:24650437-24650456 None:intergenic 20.0%
!! TTGAAGAAGTTTAATAACAA+AGG + chr7.1:24651234-24651253 MS.gene023996:CDS 20.0%
!!! TATATTCTCAAGTTTTTGTA+TGG + chr7.1:24650661-24650680 MS.gene023996:CDS 20.0%
!!! TATTATTGCCTTTGATTTAA+AGG + chr7.1:24650945-24650964 MS.gene023996:CDS 20.0%
! AAAATCACAAGTTTATGTGT+GGG - chr7.1:24650391-24650410 None:intergenic 25.0%
! AAATGTGAATTTGCAAAATG+AGG - chr7.1:24650352-24650371 None:intergenic 25.0%
! ATATTATAGGTTCATGTAGA+GGG + chr7.1:24650524-24650543 MS.gene023996:CDS 25.0%
! TAATAACTGGAAACAAATTC+AGG + chr7.1:24650801-24650820 MS.gene023996:CDS 25.0%
!! GATCTAAAATCAAAATCATC+TGG - chr7.1:24650997-24651016 None:intergenic 25.0%
!! TGTCATTTCCTTTAAATCAA+AGG - chr7.1:24650956-24650975 None:intergenic 25.0%
!! TTTGATGTATTGGTACTTAA+TGG + chr7.1:24651033-24651052 MS.gene023996:CDS 25.0%
!!! ATGATTACTTGGTAGTTTTA+GGG + chr7.1:24650707-24650726 MS.gene023996:CDS 25.0%
ACCAATACATCAAAATCTAG+AGG - chr7.1:24651027-24651046 None:intergenic 30.0%
ATAAGCAGAATCATGATTGA+GGG - chr7.1:24650461-24650480 None:intergenic 30.0%
ATGTAGAGGGTTTCTATTAT+TGG + chr7.1:24650537-24650556 MS.gene023996:CDS 30.0%
ATTTCCTTTATCACATCTTC+AGG - chr7.1:24650253-24650272 None:intergenic 30.0%
CTACATGAACCTATAATATC+AGG - chr7.1:24650523-24650542 None:intergenic 30.0%
CTAGTTTATAACTATGAGAC+TGG + chr7.1:24650913-24650932 MS.gene023996:CDS 30.0%
GAAAATCACAAGTTTATGTG+TGG - chr7.1:24650392-24650411 None:intergenic 30.0%
GATATTATAGGTTCATGTAG+AGG + chr7.1:24650523-24650542 MS.gene023996:CDS 30.0%
TATTTGTTTATTGACACCAG+TGG - chr7.1:24650596-24650615 None:intergenic 30.0%
TCTCATTGAAAGCTAATAAC+TGG + chr7.1:24650788-24650807 MS.gene023996:CDS 30.0%
TGTTCTGATCCTGATATTAT+AGG + chr7.1:24650511-24650530 MS.gene023996:CDS 30.0%
TTATAACTATGAGACTGGAA+GGG + chr7.1:24650918-24650937 MS.gene023996:CDS 30.0%
TTTATAACTATGAGACTGGA+AGG + chr7.1:24650917-24650936 MS.gene023996:CDS 30.0%
! AGTGAAAAACAATAGTCTTG+AGG - chr7.1:24651162-24651181 None:intergenic 30.0%
!! CAAGACTATTGTTTTTCACT+AGG + chr7.1:24651162-24651181 MS.gene023996:CDS 30.0%
!! GATGATTACTTGGTAGTTTT+AGG + chr7.1:24650706-24650725 MS.gene023996:CDS 30.0%
!! TCCTCTAGATTTTGATGTAT+TGG + chr7.1:24651023-24651042 MS.gene023996:CDS 30.0%
!! TTAATGGACTTATTGGTGTA+TGG + chr7.1:24651049-24651068 MS.gene023996:CDS 30.0%
!! TTGGTACTTAATGGACTTAT+TGG + chr7.1:24651042-24651061 MS.gene023996:CDS 30.0%
AACAGTGAGGCAAAAAATCA+AGG - chr7.1:24650495-24650514 None:intergenic 35.0%
AAGCAGAGACTCTGTATATA+CGG - chr7.1:24651319-24651338 None:intergenic 35.0%
AATATGCAGTGCATTCATCT+TGG + chr7.1:24651115-24651134 MS.gene023996:CDS 35.0%
AATGCGATGATGACTATGAT+CGG + chr7.1:24650737-24650756 MS.gene023996:CDS 35.0%
ACCAAGTAATCATCAGTTGA+CGG - chr7.1:24650700-24650719 None:intergenic 35.0%
ATAAACGGTGACCATAATAG+AGG - chr7.1:24651275-24651294 None:intergenic 35.0%
ATTATTACCTGCTCTGCAAA+TGG + chr7.1:24650847-24650866 MS.gene023996:CDS 35.0%
CTTGAGAATATAATCGCTGT+CGG - chr7.1:24650653-24650672 None:intergenic 35.0%
GAGCAGGTAATAATCTCATA+AGG - chr7.1:24650841-24650860 None:intergenic 35.0%
GATAAGCAGAATCATGATTG+AGG - chr7.1:24650462-24650481 None:intergenic 35.0%
TCTTCCTGAAGATGTGATAA+AGG + chr7.1:24650246-24650265 MS.gene023996:CDS 35.0%
TGGTGTATGGATTTCAGATA+TGG + chr7.1:24651062-24651081 MS.gene023996:CDS 35.0%
! ATAGTCATCATCGCATTGAT+AGG - chr7.1:24650734-24650753 None:intergenic 35.0%
! TTGGACATTTTCTATGCATC+CGG + chr7.1:24651134-24651153 MS.gene023996:CDS 35.0%
!! TCTATTGTTAGGGCTTTGAA+AGG - chr7.1:24650427-24650446 None:intergenic 35.0%
AAGTTTATGTGTGGGTGATG+AGG - chr7.1:24650383-24650402 None:intergenic 40.0%
ACCGTCAACTGATGATTACT+TGG + chr7.1:24650696-24650715 MS.gene023996:CDS 40.0%
ACTCTGTATATACGGCCATT+TGG - chr7.1:24651311-24651330 None:intergenic 40.0%
ATATCAGGATCAGAACAGTG+AGG - chr7.1:24650508-24650527 None:intergenic 40.0%
ATCACGAGAGAGAAACCAAA+TGG + chr7.1:24651293-24651312 MS.gene023996:CDS 40.0%
GCAAGTGCGTTTGTAAGTTA+TGG + chr7.1:24650308-24650327 MS.gene023996:CDS 40.0%
GGACGAAACAGTTGAGATAT+GGG + chr7.1:24651083-24651102 MS.gene023996:CDS 40.0%
GGTTTCTCTCTCGTGATAAA+CGG - chr7.1:24651290-24651309 None:intergenic 40.0%
GTAGTTGGAACAGATCTTCA+AGG + chr7.1:24651207-24651226 MS.gene023996:CDS 40.0%
TCTATACCGGCAACAGTTAT+AGG - chr7.1:24650628-24650647 None:intergenic 40.0%
TCTTGAATGGGGCTATTCAT+TGG + chr7.1:24650890-24650909 MS.gene023996:CDS 40.0%
TGATAAAGGAAATCCTGCTG+AGG + chr7.1:24650260-24650279 MS.gene023996:CDS 40.0%
TGGACGAAACAGTTGAGATA+TGG + chr7.1:24651082-24651101 MS.gene023996:CDS 40.0%
TGTTTATTGACACCAGTGGA+GGG - chr7.1:24650592-24650611 None:intergenic 40.0%
TTGTTTATTGACACCAGTGG+AGG - chr7.1:24650593-24650612 None:intergenic 40.0%
! AAACAATAGTCTTGAGGAGC+CGG - chr7.1:24651156-24651175 None:intergenic 40.0%
! GATATCTAGCTCACTTGACT+TGG + chr7.1:24650759-24650778 MS.gene023996:CDS 40.0%
ATAACCCATGCCTCTACCTA+TGG + chr7.1:24650563-24650582 MS.gene023996:CDS 45.0%
ATTCAAGAACAACCCGACTC+TGG - chr7.1:24650878-24650897 None:intergenic 45.0%
CTCTCTCCTATAACTGTTGC+CGG + chr7.1:24650619-24650638 MS.gene023996:CDS 45.0%
GCAACAGTTATAGGAGAGAG+AGG - chr7.1:24650619-24650638 None:intergenic 45.0%
GTTGGAACAGATCTTCAAGG+TGG + chr7.1:24651210-24651229 MS.gene023996:CDS 45.0%
! AGAGTCGGGTTGTTCTTGAA+TGG + chr7.1:24650877-24650896 MS.gene023996:CDS 45.0%
! AGTCGGGTTGTTCTTGAATG+GGG + chr7.1:24650879-24650898 MS.gene023996:CDS 45.0%
! CTGCTAGAGCACCTCTATTA+TGG + chr7.1:24651261-24651280 MS.gene023996:CDS 45.0%
! GAGTCGGGTTGTTCTTGAAT+GGG + chr7.1:24650878-24650897 MS.gene023996:CDS 45.0%
! GATTCCATAGGTAGAGGCAT+GGG - chr7.1:24650570-24650589 None:intergenic 45.0%
ATCGCTGTCGGCATCTATAC+CGG - chr7.1:24650641-24650660 None:intergenic 50.0%
CAAATGGTCTCACCAGAGTC+GGG + chr7.1:24650863-24650882 MS.gene023996:CDS 50.0%
CAACGAAGTACAGACCTCAC+CGG - chr7.1:24650289-24650308 None:intergenic 50.0%
CTAGGATGCTTTACGAGCTG+TGG + chr7.1:24651180-24651199 MS.gene023996:CDS 50.0%
GCAAATGGTCTCACCAGAGT+CGG + chr7.1:24650862-24650881 MS.gene023996:CDS 50.0%
GGATTCCATAGGTAGAGGCA+TGG - chr7.1:24650571-24650590 None:intergenic 50.0%
TACCTATGGAATCCCTCCAC+TGG + chr7.1:24650577-24650596 MS.gene023996:CDS 50.0%
TGGAGGGATTCCATAGGTAG+AGG - chr7.1:24650576-24650595 None:intergenic 50.0%
! ACGAGCTGTGGTGATGTAGT+TGG + chr7.1:24651192-24651211 MS.gene023996:CDS 50.0%
CACCAGTGGAGGGATTCCAT+AGG - chr7.1:24650582-24650601 None:intergenic 55.0%
GGAAATCCTGCTGAGGTTGC+CGG + chr7.1:24650267-24650286 MS.gene023996:CDS 55.0%
GGTGAGACCATTTGCAGAGC+AGG - chr7.1:24650857-24650876 None:intergenic 55.0%
ACCTCACCGGCAACCTCAGC+AGG - chr7.1:24650276-24650295 None:intergenic 65.0%
TCCTGCTGAGGTTGCCGGTG+AGG + chr7.1:24650272-24650291 MS.gene023996:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 24650226 24651362 24650226 ID=MS.gene023996
chr7.1 mRNA 24650226 24651362 24650226 ID=MS.gene023996.t1;Parent=MS.gene023996
chr7.1 exon 24650226 24651362 24650226 ID=MS.gene023996.t1.exon1;Parent=MS.gene023996.t1
chr7.1 CDS 24650226 24651362 24650226 ID=cds.MS.gene023996.t1;Parent=MS.gene023996.t1
Gene Sequence

>MS.gene023996

ATGGAGAAGAAGAAAGTGTATCTTCCTGAAGATGTGATAAAGGAAATCCTGCTGAGGTTGCCGGTGAGGTCTGTACTTCGTTGCAAGTGCGTTTGTAAGTTATGGCTTTCTATCATCTCTCGTCCTCATTTTGCAAATTCACATTTTCAACTTGCCTCATCACCCACACATAAACTTGTGATTTTCGAAGATTTTAATCCTTTCAAAGCCCTAACAATAGATTTTAATGCATCCCTCAATCATGATTCTGCTTATCATTCACTAAGCCTTGATTTTTTGCCTCACTGTTCTGATCCTGATATTATAGGTTCATGTAGAGGGTTTCTATTATTGGACTATAACCCATGCCTCTACCTATGGAATCCCTCCACTGGTGTCAATAAACAAATACCTCTCTCTCCTATAACTGTTGCCGGTATAGATGCCGACAGCGATTATATTCTCAAGTTTTTGTATGGCTTGACATATGAACCGTCAACTGATGATTACTTGGTAGTTTTAGGGTCCTATCAATGCGATGATGACTATGATCGGATATCTAGCTCACTTGACTTGGAGATTTTCTCATTGAAAGCTAATAACTGGAAACAAATTCAGGTTGCTTCTCACTTTCCTTATGAGATTATTACCTGCTCTGCAAATGGTCTCACCAGAGTCGGGTTGTTCTTGAATGGGGCTATTCATTGGCTAGTTTATAACTATGAGACTGGAAGGGATGTTATTATTGCCTTTGATTTAAAGGAAATGACAATGTCAGAGATAGCTCTTCCAGATGATTTTGATTTTAGATCTGTTTCTCCTCTAGATTTTGATGTATTGGTACTTAATGGACTTATTGGTGTATGGATTTCAGATATGGACGAAACAGTTGAGATATGGGTGATGCAAGAATATGCAGTGCATTCATCTTGGACATTTTCTATGCATCCGGCTCCTCAAGACTATTGTTTTTCACTAGGATGCTTTACGAGCTGTGGTGATGTAGTTGGAACAGATCTTCAAGGTGGATTGAAGAAGTTTAATAACAAAGGACAGCTGCTAGAGCACCTCTATTATGGTCACCGTTTATCACGAGAGAGAAACCAAATGGCCGTATATACAGAGTCTCTGCTTTCACTCCCAAGTGACACTGATTAA

Protein sequence

>MS.gene023996.t1

MEKKKVYLPEDVIKEILLRLPVRSVLRCKCVCKLWLSIISRPHFANSHFQLASSPTHKLVIFEDFNPFKALTIDFNASLNHDSAYHSLSLDFLPHCSDPDIIGSCRGFLLLDYNPCLYLWNPSTGVNKQIPLSPITVAGIDADSDYILKFLYGLTYEPSTDDYLVVLGSYQCDDDYDRISSSLDLEIFSLKANNWKQIQVASHFPYEIITCSANGLTRVGLFLNGAIHWLVYNYETGRDVIIAFDLKEMTMSEIALPDDFDFRSVSPLDFDVLVLNGLIGVWISDMDETVEIWVMQEYAVHSSWTFSMHPAPQDYCFSLGCFTSCGDVVGTDLQGGLKKFNNKGQLLEHLYYGHRLSRERNQMAVYTESLLSLPSDTD