AlfalfaGEDB | MS.gene035238

M. sativa cultivar XinJiangDaYe / MS.gene035238

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035238.t1	XP_013458210.1	59.7	221	78	6	3	215	149	366	2.90E-62	248.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035238.t1	A0A072USB5	59.7	221	78	6	3	215	149	366	2.1e-62	248.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene87564	MS.gene035238	PPI
MS.gene88774	MS.gene035238	PPI
MS.gene035238	MS.gene50311	PPI
MS.gene42452	MS.gene035238	PPI
MS.gene035238	MS.gene058989	PPI
MS.gene40986	MS.gene035238	PPI
MS.gene035238	MS.gene57538	PPI
MS.gene063414	MS.gene035238	PPI
MS.gene035238	MS.gene041468	PPI
MS.gene035238	MS.gene27319	PPI
MS.gene69307	MS.gene035238	PPI
MS.gene009892	MS.gene035238	PPI
MS.gene036662	MS.gene035238	PPI
MS.gene87563	MS.gene035238	PPI
MS.gene57526	MS.gene035238	PPI
MS.gene021553	MS.gene035238	PPI
MS.gene051820	MS.gene035238	PPI
MS.gene26957	MS.gene035238	PPI
MS.gene97996	MS.gene035238	PPI
MS.gene036582	MS.gene035238	PPI
MS.gene27021	MS.gene035238	PPI
MS.gene034680	MS.gene035238	PPI
MS.gene035235	MS.gene035238	PPI
MS.gene40988	MS.gene035238	PPI
MS.gene58320	MS.gene035238	PPI
MS.gene26101	MS.gene035238	PPI
MS.gene066120	MS.gene035238	PPI
MS.gene27283	MS.gene035238	PPI
MS.gene045140	MS.gene035238	PPI
MS.gene63657	MS.gene035238	PPI
MS.gene053299	MS.gene035238	PPI
MS.gene024004	MS.gene035238	PPI
MS.gene58781	MS.gene035238	PPI
MS.gene035238	MS.gene24173	PPI
MS.gene57717	MS.gene035238	PPI
MS.gene033440	MS.gene035238	PPI
MS.gene44886	MS.gene035238	PPI
MS.gene87562	MS.gene035238	PPI
MS.gene066623	MS.gene035238	PPI
MS.gene038756	MS.gene035238	PPI
MS.gene40904	MS.gene035238	PPI
MS.gene40984	MS.gene035238	PPI
MS.gene033442	MS.gene035238	PPI
MS.gene035238	MS.gene023999	PPI
MS.gene024420	MS.gene035238	PPI
MS.gene87569	MS.gene035238	PPI
MS.gene041491	MS.gene035238	PPI
MS.gene51201	MS.gene035238	PPI
MS.gene88416	MS.gene035238	PPI
MS.gene033443	MS.gene035238	PPI
MS.gene51207	MS.gene035238	PPI
MS.gene50311	MS.gene035238	PPI
MS.gene059096	MS.gene035238	PPI
MS.gene57528	MS.gene035238	PPI
MS.gene50297	MS.gene035238	PPI
MS.gene035238	MS.gene000036	PPI
MS.gene006711	MS.gene035238	PPI
MS.gene035238	MS.gene50320	PPI
MS.gene27285	MS.gene035238	PPI
MS.gene58716	MS.gene035238	PPI
MS.gene68580	MS.gene035238	PPI
MS.gene019505	MS.gene035238	PPI
MS.gene053257	MS.gene035238	PPI
MS.gene045476	MS.gene035238	PPI
MS.gene58785	MS.gene035238	PPI
MS.gene24208	MS.gene035238	PPI
MS.gene50307	MS.gene035238	PPI
MS.gene034690	MS.gene035238	PPI
MS.gene044429	MS.gene035238	PPI
MS.gene024009	MS.gene035238	PPI
MS.gene066639	MS.gene035238	PPI
MS.gene51189	MS.gene035238	PPI
MS.gene036599	MS.gene035238	PPI
MS.gene044426	MS.gene035238	PPI
MS.gene85454	MS.gene035238	PPI
MS.gene96407	MS.gene035238	PPI
MS.gene036558	MS.gene035238	PPI
MS.gene50309	MS.gene035238	PPI
MS.gene036760	MS.gene035238	PPI
MS.gene77857	MS.gene035238	PPI
MS.gene27022	MS.gene035238	PPI
MS.gene43790	MS.gene035238	PPI
MS.gene57527	MS.gene035238	PPI
MS.gene51191	MS.gene035238	PPI
MS.gene033426	MS.gene035238	PPI
MS.gene035238	MS.gene50305	PPI
MS.gene035237	MS.gene035238	PPI
MS.gene016220	MS.gene035238	PPI
MS.gene064086	MS.gene035238	PPI
MS.gene034681	MS.gene035238	PPI
MS.gene035238	MS.gene032969	PPI
MS.gene034677	MS.gene035238	PPI
MS.gene50298	MS.gene035238	PPI
MS.gene036584	MS.gene035238	PPI
MS.gene67687	MS.gene035238	PPI
MS.gene035261	MS.gene035238	PPI
MS.gene035238	MS.gene42445	PPI
MS.gene035238	MS.gene22715	PPI
MS.gene063670	MS.gene035238	PPI
MS.gene27319	MS.gene035238	PPI
MS.gene035238	MS.gene63657	PPI
MS.gene71159	MS.gene035238	PPI
MS.gene019506	MS.gene035238	PPI
MS.gene77858	MS.gene035238	PPI
MS.gene035238	MS.gene023996	PPI
MS.gene006705	MS.gene035238	PPI
MS.gene058692	MS.gene035238	PPI
MS.gene033083	MS.gene035238	PPI
MS.gene69309	MS.gene035238	PPI
MS.gene63658	MS.gene035238	PPI
MS.gene024002	MS.gene035238	PPI
MS.gene033081	MS.gene035238	PPI
MS.gene036581	MS.gene035238	PPI
MS.gene035238	MS.gene061240	PPI
MS.gene035263	MS.gene035238	PPI
MS.gene57538	MS.gene035238	PPI
MS.gene035262	MS.gene035238	PPI
MS.gene034686	MS.gene035238	PPI
MS.gene40982	MS.gene035238	PPI
MS.gene070461	MS.gene035238	PPI
MS.gene035238	MS.gene035234	PPI
MS.gene003076	MS.gene035238	PPI
MS.gene51199	MS.gene035238	PPI
MS.gene064108	MS.gene035238	PPI
MS.gene58315	MS.gene035238	PPI
MS.gene058703	MS.gene035238	PPI
MS.gene87557	MS.gene035238	PPI
MS.gene030114	MS.gene035238	PPI
MS.gene87559	MS.gene035238	PPI
MS.gene036663	MS.gene035238	PPI
MS.gene033431	MS.gene035238	PPI
MS.gene064109	MS.gene035238	PPI
MS.gene24212	MS.gene035238	PPI
MS.gene041475	MS.gene035238	PPI
MS.gene035238	MS.gene044425	PPI
MS.gene81242	MS.gene035238	PPI
MS.gene64203	MS.gene035238	PPI
MS.gene060367	MS.gene035238	PPI
MS.gene42444	MS.gene035238	PPI
MS.gene51202	MS.gene035238	PPI
MS.gene44428	MS.gene035238	PPI
MS.gene059101	MS.gene035238	PPI
MS.gene036664	MS.gene035238	PPI
MS.gene035238	MS.gene27022	PPI
MS.gene064111	MS.gene035238	PPI
MS.gene041391	MS.gene035238	PPI
MS.gene87584	MS.gene035238	PPI
MS.gene035238	MS.gene024009	PPI
MS.gene035238	MS.gene036599	PPI
MS.gene26829	MS.gene035238	PPI
MS.gene064104	MS.gene035238	PPI
MS.gene40878	MS.gene035238	PPI
MS.gene053256	MS.gene035238	PPI
MS.gene36595	MS.gene035238	PPI
MS.gene035238	MS.gene006705	PPI
MS.gene75875	MS.gene035238	PPI
MS.gene035234	MS.gene035238	PPI
MS.gene54049	MS.gene035238	PPI
MS.gene50337	MS.gene035238	PPI
MS.gene43789	MS.gene035238	PPI
MS.gene061240	MS.gene035238	PPI
MS.gene27284	MS.gene035238	PPI
MS.gene50332	MS.gene035238	PPI
MS.gene072177	MS.gene035238	PPI
MS.gene58722	MS.gene035238	PPI
MS.gene064091	MS.gene035238	PPI
MS.gene064112	MS.gene035238	PPI
MS.gene061241	MS.gene035238	PPI
MS.gene24213	MS.gene035238	PPI
MS.gene43796	MS.gene035238	PPI
MS.gene035238	MS.gene058696	PPI
MS.gene58312	MS.gene035238	PPI
MS.gene035238	MS.gene009893	PPI
MS.gene36704	MS.gene035238	PPI
MS.gene24173	MS.gene035238	PPI
MS.gene036556	MS.gene035238	PPI
MS.gene58313	MS.gene035238	PPI
MS.gene066622	MS.gene035238	PPI
MS.gene44887	MS.gene035238	PPI
MS.gene85043	MS.gene035238	PPI
MS.gene39265	MS.gene035238	PPI
MS.gene63655	MS.gene035238	PPI
MS.gene033430	MS.gene035238	PPI
MS.gene44883	MS.gene035238	PPI
MS.gene036583	MS.gene035238	PPI
MS.gene88780	MS.gene035238	PPI
MS.gene41046	MS.gene035238	PPI
MS.gene063472	MS.gene035238	PPI
MS.gene87588	MS.gene035238	PPI
MS.gene055694	MS.gene035238	PPI
MS.gene017412	MS.gene035238	PPI
MS.gene58314	MS.gene035238	PPI
MS.gene045473	MS.gene035238	PPI
MS.gene024000	MS.gene035238	PPI
MS.gene50320	MS.gene035238	PPI
MS.gene96448	MS.gene035238	PPI
MS.gene51192	MS.gene035238	PPI
MS.gene87585	MS.gene035238	PPI
MS.gene009883	MS.gene035238	PPI
MS.gene041392	MS.gene035238	PPI
MS.gene42445	MS.gene035238	PPI
MS.gene035238	MS.gene045473	PPI
MS.gene58317	MS.gene035238	PPI
MS.gene58240	MS.gene035238	PPI
MS.gene044563	MS.gene035238	PPI
MS.gene069075	MS.gene035238	PPI
MS.gene033427	MS.gene035238	PPI
MS.gene40985	MS.gene035238	PPI
MS.gene031591	MS.gene035238	PPI
MS.gene035238	MS.gene40984	PPI
MS.gene50301	MS.gene035238	PPI
MS.gene58321	MS.gene035238	PPI
MS.gene041388	MS.gene035238	PPI
MS.gene062698	MS.gene035238	PPI
MS.gene57536	MS.gene035238	PPI
MS.gene96126	MS.gene035238	PPI
MS.gene019503	MS.gene035238	PPI
MS.gene016524	MS.gene035238	PPI
MS.gene50304	MS.gene035238	PPI
MS.gene041473	MS.gene035238	PPI
MS.gene50336	MS.gene035238	PPI
MS.gene009893	MS.gene035238	PPI
MS.gene59943	MS.gene035238	PPI
MS.gene035238	MS.gene58240	PPI
MS.gene035238	MS.gene27284	PPI
MS.gene31587	MS.gene035238	PPI
MS.gene036557	MS.gene035238	PPI
MS.gene041393	MS.gene035238	PPI
MS.gene033441	MS.gene035238	PPI
MS.gene035238	MS.gene034680	PPI
MS.gene063474	MS.gene035238	PPI
MS.gene048193	MS.gene035238	PPI
MS.gene023996	MS.gene035238	PPI
MS.gene063826	MS.gene035238	PPI
MS.gene84698	MS.gene035238	PPI
MS.gene44892	MS.gene035238	PPI
MS.gene009891	MS.gene035238	PPI
MS.gene58239	MS.gene035238	PPI
MS.gene023999	MS.gene035238	PPI
MS.gene066641	MS.gene035238	PPI
MS.gene024011	MS.gene035238	PPI
MS.gene000038	MS.gene035238	PPI
MS.gene57531	MS.gene035238	PPI
MS.gene67501	MS.gene035238	PPI
MS.gene90742	MS.gene035238	PPI
MS.gene39262	MS.gene035238	PPI
MS.gene58241	MS.gene035238	PPI
MS.gene57535	MS.gene035238	PPI
MS.gene025887	MS.gene035238	PPI
MS.gene019507	MS.gene035238	PPI
MS.gene045474	MS.gene035238	PPI
MS.gene041470	MS.gene035238	PPI
MS.gene058694	MS.gene035238	PPI
MS.gene064090	MS.gene035238	PPI
MS.gene024979	MS.gene035238	PPI
MS.gene058701	MS.gene035238	PPI
MS.gene058989	MS.gene035238	PPI
MS.gene032969	MS.gene035238	PPI
MS.gene000036	MS.gene035238	PPI
MS.gene035238	MS.gene041489	PPI
MS.gene015089	MS.gene035238	PPI
MS.gene006710	MS.gene035238	PPI
MS.gene035238	MS.gene38220	PPI
MS.gene90743	MS.gene035238	PPI
MS.gene44885	MS.gene035238	PPI
MS.gene011679	MS.gene035238	PPI
MS.gene87554	MS.gene035238	PPI
MS.gene060370	MS.gene035238	PPI
MS.gene033079	MS.gene035238	PPI
MS.gene64001	MS.gene035238	PPI
MS.gene57533	MS.gene035238	PPI
MS.gene51190	MS.gene035238	PPI
MS.gene032970	MS.gene035238	PPI
MS.gene77856	MS.gene035238	PPI
MS.gene24826	MS.gene035238	PPI
MS.gene57532	MS.gene035238	PPI
MS.gene68890	MS.gene035238	PPI
MS.gene40887	MS.gene035238	PPI
MS.gene035238	MS.gene80610	PPI
MS.gene80610	MS.gene035238	PPI
MS.gene034688	MS.gene035238	PPI
MS.gene51188	MS.gene035238	PPI
MS.gene060366	MS.gene035238	PPI
MS.gene047279	MS.gene035238	PPI
MS.gene48221	MS.gene035238	PPI
MS.gene57529	MS.gene035238	PPI
MS.gene035238	MS.gene041391	PPI
MS.gene80884	MS.gene035238	PPI
MS.gene041395	MS.gene035238	PPI
MS.gene40886	MS.gene035238	PPI
MS.gene40902	MS.gene035238	PPI
MS.gene03060	MS.gene035238	PPI
MS.gene27051	MS.gene035238	PPI
MS.gene060368	MS.gene035238	PPI
MS.gene033875	MS.gene035238	PPI
MS.gene035238	MS.gene064083	PPI
MS.gene041474	MS.gene035238	PPI
MS.gene77704	MS.gene035238	PPI
MS.gene058696	MS.gene035238	PPI
MS.gene27020	MS.gene035238	PPI
MS.gene066620	MS.gene035238	PPI
MS.gene035236	MS.gene035238	PPI
MS.gene50305	MS.gene035238	PPI
MS.gene035238	MS.gene016220	PPI
MS.gene86273	MS.gene035238	PPI
MS.gene035238	MS.gene024008	PPI
MS.gene041394	MS.gene035238	PPI
MS.gene059157	MS.gene035238	PPI
MS.gene51208	MS.gene035238	PPI
MS.gene57525	MS.gene035238	PPI
MS.gene028390	MS.gene035238	PPI
MS.gene011106	MS.gene035238	PPI
MS.gene62398	MS.gene035238	PPI
MS.gene60027	MS.gene035238	PPI
MS.gene064083	MS.gene035238	PPI
MS.gene28758	MS.gene035238	PPI
MS.gene035238	MS.gene28758	PPI
MS.gene045475	MS.gene035238	PPI
MS.gene88776	MS.gene035238	PPI
MS.gene35068	MS.gene035238	PPI
MS.gene041390	MS.gene035238	PPI
MS.gene90744	MS.gene035238	PPI
MS.gene24286	MS.gene035238	PPI
MS.gene51204	MS.gene035238	PPI
MS.gene58783	MS.gene035238	PPI
MS.gene058693	MS.gene035238	PPI
MS.gene92376	MS.gene035238	PPI
MS.gene000035	MS.gene035238	PPI
MS.gene50329	MS.gene035238	PPI
MS.gene070462	MS.gene035238	PPI
MS.gene31637	MS.gene035238	PPI
MS.gene87573	MS.gene035238	PPI
MS.gene57537	MS.gene035238	PPI
MS.gene42447	MS.gene035238	PPI
MS.gene019504	MS.gene035238	PPI
MS.gene034762	MS.gene035238	PPI
MS.gene064114	MS.gene035238	PPI
MS.gene059156	MS.gene035238	PPI
MS.gene041468	MS.gene035238	PPI
MS.gene82082	MS.gene035238	PPI
MS.gene22715	MS.gene035238	PPI
MS.gene033444	MS.gene035238	PPI
MS.gene50306	MS.gene035238	PPI
MS.gene035238	MS.gene033442	PPI
MS.gene58316	MS.gene035238	PPI
MS.gene38220	MS.gene035238	PPI
MS.gene26949	MS.gene035238	PPI
MS.gene012215	MS.gene035238	PPI
MS.gene024008	MS.gene035238	PPI
MS.gene87200	MS.gene035238	PPI
MS.gene58311	MS.gene035238	PPI
MS.gene58319	MS.gene035238	PPI
MS.gene058669	MS.gene035238	PPI
MS.gene59637	MS.gene035238	PPI
MS.gene26830	MS.gene035238	PPI
MS.gene033432	MS.gene035238	PPI
MS.gene035238	MS.gene058703	PPI
MS.gene044425	MS.gene035238	PPI
MS.gene041489	MS.gene035238	PPI
MS.gene035238	MS.gene024000	PPI
MS.gene59639	MS.gene035238	PPI
MS.gene031590	MS.gene035238	PPI
MS.gene50327	MS.gene035238	PPI
MS.gene066635	MS.gene035238	PPI
MS.gene010758	MS.gene035238	PPI
MS.gene96406	MS.gene035238	PPI
MS.gene87586	MS.gene035238	PPI
MS.gene57530	MS.gene035238	PPI
MS.gene066626	MS.gene035238	PPI
MS.gene50326	MS.gene035238	PPI
MS.gene035238	MS.gene36595	PPI
MS.gene42451	MS.gene035238	PPI
MS.gene51200	MS.gene035238	PPI
MS.gene50339	MS.gene035238	PPI
MS.gene54541	MS.gene035238	PPI
MS.gene046958	MS.gene035238	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035238.t1	MTR_4g117780	57.658	222	83	6	3	216	149	367	6.33e-70	218
MS.gene035238.t1	MTR_4g117770	57.658	222	83	6	3	216	149	367	1.59e-67	211
MS.gene035238.t1	MTR_4g117810	57.658	222	83	6	3	216	149	367	1.59e-67	211
MS.gene035238.t1	MTR_6g060650	55.357	224	81	6	3	215	157	372	3.14e-66	208
MS.gene035238.t1	MTR_4g023130	55.505	218	83	6	3	215	104	312	4.78e-65	204
MS.gene035238.t1	MTR_4g117850	55.556	225	76	7	3	209	155	373	1.65e-64	204
MS.gene035238.t1	MTR_4g117720	54.741	232	79	9	3	216	155	378	7.09e-64	202
MS.gene035238.t1	MTR_3g034180	54.077	233	80	6	3	215	263	488	9.43e-64	205
MS.gene035238.t1	MTR_4g023080	54.587	218	85	6	3	215	145	353	1.57e-63	201
MS.gene035238.t1	MTR_3g103020	53.947	228	85	7	3	216	157	378	9.22e-63	199
MS.gene035238.t1	MTR_8g040935	56.585	205	77	6	18	216	10	208	2.03e-62	193
MS.gene035238.t1	MTR_4g109280	57.500	200	74	6	20	216	168	359	7.85e-62	197
MS.gene035238.t1	MTR_4g109270	54.545	220	89	5	3	216	150	364	9.87e-62	197
MS.gene035238.t1	MTR_3g034160	53.448	232	83	5	3	215	149	374	4.35e-59	190
MS.gene035238.t1	MTR_4g116330	52.212	226	89	7	3	216	162	380	7.35e-59	190
MS.gene035238.t1	MTR_4g118380	55.172	203	72	5	3	190	159	357	1.12e-58	189
MS.gene035238.t1	MTR_4g116320	55.941	202	74	7	17	213	64	255	7.41e-58	183
MS.gene035238.t1	MTR_4g122850	50.877	228	92	8	3	216	143	364	2.65e-56	183
MS.gene035238.t1	MTR_4g021785	50.685	219	95	6	3	216	145	355	3.94e-56	182
MS.gene035238.t1	MTR_1g055135	49.565	230	97	6	3	216	149	375	8.86e-56	182
MS.gene035238.t1	MTR_3g034130	54.106	207	70	5	3	190	149	349	2.20e-55	181
MS.gene035238.t1	MTR_1g055175	51.244	201	84	7	22	216	9	201	9.76e-55	174
MS.gene035238.t1	MTR_4g023090	46.957	230	94	6	3	211	157	379	2.18e-54	178
MS.gene035238.t1	MTR_4g023070	47.917	240	89	9	3	215	139	369	5.19e-54	177
MS.gene035238.t1	MTR_4g118400	53.886	193	66	6	20	210	123	294	1.08e-53	174
MS.gene035238.t1	MTR_4g023380	47.059	238	87	8	3	216	157	379	8.34e-52	171
MS.gene035238.t1	MTR_4g094365	50.222	225	93	9	3	216	148	364	1.50e-51	170
MS.gene035238.t1	MTR_5g097210	50.885	226	84	10	3	211	143	358	4.29e-51	169
MS.gene035238.t1	MTR_4g023120	45.643	241	95	9	3	216	139	370	1.40e-48	163
MS.gene035238.t1	MTR_8g433030	52.308	195	84	6	20	212	151	338	2.10e-48	162
MS.gene035238.t1	MTR_8g032390	52.308	195	84	6	20	212	184	371	6.04e-48	161
MS.gene035238.t1	MTR_1g055195	49.778	225	94	9	3	216	262	478	7.68e-48	164
MS.gene035238.t1	MTR_6g463430	48.357	213	87	10	14	216	3	202	2.22e-47	155
MS.gene035238.t1	MTR_1g055165	51.765	170	72	5	50	216	156	318	1.18e-46	156
MS.gene035238.t1	MTR_4g023190	47.727	220	98	7	3	214	147	357	1.35e-46	157
MS.gene035238.t1	MTR_4g023200	47.273	220	100	7	3	214	147	358	2.26e-46	157
MS.gene035238.t1	MTR_5g070080	49.776	223	93	8	3	213	167	382	4.45e-46	157
MS.gene035238.t1	MTR_4g023150	47.273	220	100	7	3	214	147	358	2.68e-45	154
MS.gene035238.t1	MTR_8g433040	46.087	230	87	10	3	216	156	364	4.44e-43	148
MS.gene035238.t1	MTR_8g032380	46.087	230	87	10	3	216	156	364	4.44e-43	148
MS.gene035238.t1	MTR_4g117530	45.413	218	77	7	3	216	74	253	4.51e-43	145
MS.gene035238.t1	MTR_4g118370	46.429	224	80	10	3	211	57	255	1.75e-42	144
MS.gene035238.t1	MTR_1g055250	45.098	204	93	7	1	193	49	244	4.09e-42	145
MS.gene035238.t1	MTR_4g117750	45.778	225	100	9	4	210	133	353	4.90e-40	143
MS.gene035238.t1	MTR_4g117750	60.185	108	38	4	107	211	373	478	1.41e-30	117
MS.gene035238.t1	MTR_5g070088	44.493	227	105	8	3	214	163	383	2.11e-39	139
MS.gene035238.t1	MTR_7g079400	40.928	237	111	9	1	216	109	337	4.06e-39	137
MS.gene035238.t1	MTR_8g102520	41.631	233	111	9	1	216	98	322	6.58e-39	136
MS.gene035238.t1	MTR_4g117870	43.363	226	73	8	3	216	85	267	3.31e-38	133
MS.gene035238.t1	MTR_5g070130	42.358	229	110	9	3	213	149	373	9.75e-38	135
MS.gene035238.t1	MTR_4g023440	42.986	221	73	7	4	216	157	332	7.39e-37	131
MS.gene035238.t1	MTR_4g116330	42.478	226	72	7	3	216	162	341	1.35e-35	128
MS.gene035238.t1	MTR_4g118360	56.818	132	48	5	88	216	1	126	1.03e-34	120
MS.gene035238.t1	MTR_2g048580	35.747	221	119	8	3	216	138	342	5.78e-31	116
MS.gene035238.t1	MTR_7g079370	36.325	234	112	9	3	212	132	352	4.98e-30	114
MS.gene035238.t1	MTR_4g117430	51.240	121	46	4	3	118	42	154	2.12e-29	107
MS.gene035238.t1	MTR_4g121580	44.103	195	63	9	3	184	157	318	4.28e-29	112
MS.gene035238.t1	MTR_8g098830	41.765	170	86	6	21	186	34	194	9.81e-29	107
MS.gene035238.t1	MTR_5g023000	60.000	95	36	2	123	216	6	99	9.92e-28	101
MS.gene035238.t1	MTR_4g122860	39.594	197	79	8	27	216	157	320	4.38e-26	103
MS.gene035238.t1	MTR_8g013010	53.226	124	38	5	3	116	196	309	6.85e-26	102
MS.gene035238.t1	MTR_4g114700	36.199	221	72	6	3	207	51	218	2.04e-23	94.4
MS.gene035238.t1	MTR_7g079420	36.527	167	97	5	53	216	984	1144	1.66e-22	95.5
MS.gene035238.t1	MTR_7g079450	42.466	146	72	5	73	216	2	137	2.73e-21	85.9
MS.gene035238.t1	MTR_7g117720	55.172	87	35	1	129	211	186	272	4.75e-18	80.5
MS.gene035238.t1	MTR_4g023430	50.602	83	36	2	138	216	141	222	1.09e-15	73.2
MS.gene035238.t1	MTR_8g013005	68.333	60	17	2	158	216	1	59	2.34e-15	68.2
MS.gene035238.t1	MTR_6g034720	44.000	100	42	3	3	90	73	170	8.73e-15	70.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 50 sgRNAs with CRISPR-Local

Find 58 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCAAGTTTGATGGAATATA+AGG	0.192370	8.1:+9555107	None:intergenic
GATTGTGGTTTGTGGGTATT+TGG	0.221112	8.1:-9554843	MS.gene035238:CDS
ATCGTAATACAACTGAAATA+TGG	0.303594	8.1:-9554791	MS.gene035238:CDS
GAGTAGGGTCCCTTTGTAAT+GGG	0.322096	8.1:-9554998	MS.gene035238:CDS
TTTGTAATGGGGCTATTCAT+TGG	0.336970	8.1:-9554986	MS.gene035238:CDS
CTAATGATGTCCTTTACATT+TGG	0.354400	8.1:-9554716	MS.gene035238:CDS
CCCTTATATTCCATCAAACT+TGG	0.358101	8.1:-9555108	MS.gene035238:CDS
GACTCTTTGCTTTCACTCCC+TGG	0.364558	8.1:-9554543	MS.gene035238:CDS
GGAGTAGGGTCCCTTTGTAA+TGG	0.396390	8.1:-9554999	MS.gene035238:CDS
TTTCCAGATGATTATTATAA+CGG	0.407070	8.1:-9554885	MS.gene035238:CDS
AGTCCCGTTGATGATTATTC+CGG	0.422801	8.1:-9555020	MS.gene035238:CDS
AGAGCATTGCTCCAATTGTA+AGG	0.429098	8.1:-9554595	MS.gene035238:CDS
TAATGGGGCTATTCATTGGT+TGG	0.429474	8.1:-9554982	MS.gene035238:CDS
TCGTAATACAACTGAAATAT+GGG	0.435341	8.1:-9554790	MS.gene035238:CDS
ACCACGTGAATCCTTACAAT+TGG	0.439030	8.1:+9554584	None:intergenic
AAACCGTTATAATAATCATC+TGG	0.454919	8.1:+9554882	None:intergenic
CCAAGTTTGATGGAATATAA+GGG	0.458503	8.1:+9555108	None:intergenic
ACGTATGGATTGTGGTTTGT+GGG	0.472010	8.1:-9554850	MS.gene035238:CDS
AGATGGTGGTACAGAAAGGT+TGG	0.484999	8.1:-9554646	MS.gene035238:CDS
GTTGATGATTATTCCGGAGT+AGG	0.486016	8.1:-9555014	MS.gene035238:CDS
ACTCCGGAATAATCATCAAC+GGG	0.493191	8.1:+9555017	None:intergenic
CTACTACAAGGGGAGTGATC+AGG	0.499364	8.1:+9555041	None:intergenic
TTTCCGTTGATTTAACAGAA+AGG	0.499674	8.1:-9554926	MS.gene035238:CDS
TTTCCTTTCTGTTAAATCAA+CGG	0.503324	8.1:+9554923	None:intergenic
AACGTATGGATTGTGGTTTG+TGG	0.511387	8.1:-9554851	MS.gene035238:CDS
AATACAAAGTGAATTCGTCT+TGG	0.512787	8.1:-9554758	MS.gene035238:CDS
TTGATGATTATTCCGGAGTA+GGG	0.518500	8.1:-9555013	MS.gene035238:CDS
TAAGCTTGCTCATTGCCACC+AGG	0.520225	8.1:+9554525	None:intergenic
ATTACAAAGGGACCCTACTC+CGG	0.531948	8.1:+9555001	None:intergenic
GGGAAAAGTACCAAATGTAA+AGG	0.532919	8.1:+9554706	None:intergenic
ATTTCTCAGTCTATGCGCTA+AGG	0.533303	8.1:-9554817	MS.gene035238:CDS
TCTCATTGAGAGACAATACA+TGG	0.536974	8.1:-9555079	MS.gene035238:CDS
TTTCTCAGTCTATGCGCTAA+GGG	0.541350	8.1:-9554816	MS.gene035238:CDS
ATTTGTGAACGTATGGATTG+TGG	0.541400	8.1:-9554858	MS.gene035238:CDS
GGTGATATTATTGGAAGAGA+TGG	0.541574	8.1:-9554663	MS.gene035238:CDS
TCATCAACGGGACTACTACA+AGG	0.551058	8.1:+9555029	None:intergenic
ATGAATAGCCCCATTACAAA+GGG	0.555543	8.1:+9554989	None:intergenic
GAAGAGATGGTGGTACAGAA+AGG	0.566869	8.1:-9554650	MS.gene035238:CDS
CTGATCATCTCCAAAACCAT+AGG	0.587717	8.1:+9555148	None:intergenic
TACTCCGGAATAATCATCAA+CGG	0.590143	8.1:+9555016	None:intergenic
AATGAATAGCCCCATTACAA+AGG	0.597680	8.1:+9554988	None:intergenic
CATCAACGGGACTACTACAA+GGG	0.609440	8.1:+9555030	None:intergenic
GATATTATTGGAAGAGATGG+TGG	0.612062	8.1:-9554660	MS.gene035238:CDS
AAGCTTGCTCATTGCCACCA+GGG	0.612937	8.1:+9554526	None:intergenic
TCTTTGCTTTCACTCCCTGG+TGG	0.621264	8.1:-9554540	MS.gene035238:CDS
AATTGTAAGGATTCACGTGG+TGG	0.626284	8.1:-9554582	MS.gene035238:CDS
AGTAGGGTCCCTTTGTAATG+GGG	0.631345	8.1:-9554997	MS.gene035238:CDS
ATCAACGGGACTACTACAAG+GGG	0.651675	8.1:+9555031	None:intergenic
TCCAATTGTAAGGATTCACG+TGG	0.697098	8.1:-9554585	MS.gene035238:CDS
TTGGTGAAGTATGATGACAA+TGG	0.748686	8.1:-9554627	MS.gene035238:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTCCAGATGATTATTATAA+CGG	-	chr8.1:9554791-9554810	MS.gene035238:CDS	20.0%
!!!	TTTTCGTGATGATTTAAAAA+AGG	-	chr8.1:9554718-9554737	MS.gene035238:CDS	20.0%
!	AAACCGTTATAATAATCATC+TGG	+	chr8.1:9554797-9554816	None:intergenic	25.0%
!	ACAAAAAGTGGTGATATTAT+TGG	-	chr8.1:9555004-9555023	MS.gene035238:CDS	25.0%
!	ATCGTAATACAACTGAAATA+TGG	-	chr8.1:9554885-9554904	MS.gene035238:CDS	25.0%
!	TCGTAATACAACTGAAATAT+GGG	-	chr8.1:9554886-9554905	MS.gene035238:CDS	25.0%
!	TTTCCTTTCTGTTAAATCAA+CGG	+	chr8.1:9554756-9554775	None:intergenic	25.0%
!!	ACTTTTTGTACAACAAATTG+GGG	+	chr8.1:9554993-9555012	None:intergenic	25.0%
!!!	CACTTTTTGTACAACAAATT+GGG	+	chr8.1:9554994-9555013	None:intergenic	25.0%
	AATACAAAGTGAATTCGTCT+TGG	-	chr8.1:9554918-9554937	MS.gene035238:CDS	30.0%
	CCAAGTTTGATGGAATATAA+GGG	+	chr8.1:9554571-9554590	None:intergenic	30.0%
	CTAATGATGTCCTTTACATT+TGG	-	chr8.1:9554960-9554979	MS.gene035238:CDS	30.0%
	TCCAAGTTTGATGGAATATA+AGG	+	chr8.1:9554572-9554591	None:intergenic	30.0%
!!	CCAATTTGTTGTACAAAAAG+TGG	-	chr8.1:9554992-9555011	MS.gene035238:CDS	30.0%
!!	TTTCCGTTGATTTAACAGAA+AGG	-	chr8.1:9554750-9554769	MS.gene035238:CDS	30.0%
!!!	CCACTTTTTGTACAACAAAT+TGG	+	chr8.1:9554995-9555014	None:intergenic	30.0%
	AATGAATAGCCCCATTACAA+AGG	+	chr8.1:9554691-9554710	None:intergenic	35.0%
	ATGAATAGCCCCATTACAAA+GGG	+	chr8.1:9554690-9554709	None:intergenic	35.0%
	CCCTTATATTCCATCAAACT+TGG	-	chr8.1:9554568-9554587	MS.gene035238:CDS	35.0%
	GAGAAAAACTCCAAGTTTGA+TGG	+	chr8.1:9554581-9554600	None:intergenic	35.0%
	GATATTATTGGAAGAGATGG+TGG	-	chr8.1:9555016-9555035	MS.gene035238:CDS	35.0%
	GGTGATATTATTGGAAGAGA+TGG	-	chr8.1:9555013-9555032	MS.gene035238:CDS	35.0%
	TACTCCGGAATAATCATCAA+CGG	+	chr8.1:9554663-9554682	None:intergenic	35.0%
	TCTCATTGAGAGACAATACA+TGG	-	chr8.1:9554597-9554616	MS.gene035238:CDS	35.0%
	TTGGTGAAGTATGATGACAA+TGG	-	chr8.1:9555049-9555068	MS.gene035238:CDS	35.0%
!	ATTTGTGAACGTATGGATTG+TGG	-	chr8.1:9554818-9554837	MS.gene035238:CDS	35.0%
!	TTGATGATTATTCCGGAGTA+GGG	-	chr8.1:9554663-9554682	MS.gene035238:CDS	35.0%
!	TTTGTAATGGGGCTATTCAT+TGG	-	chr8.1:9554690-9554709	MS.gene035238:CDS	35.0%
!!	GGGAAAAGTACCAAATGTAA+AGG	+	chr8.1:9554973-9554992	None:intergenic	35.0%
!!!	CGGTTTTATTTGTGAACGTA+TGG	-	chr8.1:9554811-9554830	MS.gene035238:CDS	35.0%
	AATTGTAAGGATTCACGTGG+TGG	-	chr8.1:9555094-9555113	MS.gene035238:CDS	40.0%
	ACCACGTGAATCCTTACAAT+TGG	+	chr8.1:9555095-9555114	None:intergenic	40.0%
	ACTCCGGAATAATCATCAAC+GGG	+	chr8.1:9554662-9554681	None:intergenic	40.0%
	ATTTCTCAGTCTATGCGCTA+AGG	-	chr8.1:9554859-9554878	MS.gene035238:CDS	40.0%
	CTGATCATCTCCAAAACCAT+AGG	+	chr8.1:9554531-9554550	None:intergenic	40.0%
	TAATGGGGCTATTCATTGGT+TGG	-	chr8.1:9554694-9554713	MS.gene035238:CDS	40.0%
	TCCAATTGTAAGGATTCACG+TGG	-	chr8.1:9555091-9555110	MS.gene035238:CDS	40.0%
	TTTCTCAGTCTATGCGCTAA+GGG	-	chr8.1:9554860-9554879	MS.gene035238:CDS	40.0%
!	AACGTATGGATTGTGGTTTG+TGG	-	chr8.1:9554825-9554844	MS.gene035238:CDS	40.0%
!	ACGTATGGATTGTGGTTTGT+GGG	-	chr8.1:9554826-9554845	MS.gene035238:CDS	40.0%
!	GATTGTGGTTTGTGGGTATT+TGG	-	chr8.1:9554833-9554852	MS.gene035238:CDS	40.0%
!!	AGAGCATTGCTCCAATTGTA+AGG	-	chr8.1:9555081-9555100	MS.gene035238:CDS	40.0%
!!	AGTCCCGTTGATGATTATTC+CGG	-	chr8.1:9554656-9554675	MS.gene035238:CDS	40.0%
!!	GTTGATGATTATTCCGGAGT+AGG	-	chr8.1:9554662-9554681	MS.gene035238:CDS	40.0%
	AGTAGGGTCCCTTTGTAATG+GGG	-	chr8.1:9554679-9554698	MS.gene035238:CDS	45.0%
	ATCAACGGGACTACTACAAG+GGG	+	chr8.1:9554648-9554667	None:intergenic	45.0%
	ATTACAAAGGGACCCTACTC+CGG	+	chr8.1:9554678-9554697	None:intergenic	45.0%
	CATCAACGGGACTACTACAA+GGG	+	chr8.1:9554649-9554668	None:intergenic	45.0%
	GAGTAGGGTCCCTTTGTAAT+GGG	-	chr8.1:9554678-9554697	MS.gene035238:CDS	45.0%
	TCATCAACGGGACTACTACA+AGG	+	chr8.1:9554650-9554669	None:intergenic	45.0%
!	AGATGGTGGTACAGAAAGGT+TGG	-	chr8.1:9555030-9555049	MS.gene035238:CDS	45.0%
!	GAAGAGATGGTGGTACAGAA+AGG	-	chr8.1:9555026-9555045	MS.gene035238:CDS	45.0%
	CTACTACAAGGGGAGTGATC+AGG	+	chr8.1:9554638-9554657	None:intergenic	50.0%
	GACTCTTTGCTTTCACTCCC+TGG	-	chr8.1:9555133-9555152	MS.gene035238:CDS	50.0%
	GGAGTAGGGTCCCTTTGTAA+TGG	-	chr8.1:9554677-9554696	MS.gene035238:CDS	50.0%
	TCTTTGCTTTCACTCCCTGG+TGG	-	chr8.1:9555136-9555155	MS.gene035238:CDS	50.0%
!	AAGCTTGCTCATTGCCACCA+GGG	+	chr8.1:9555153-9555172	None:intergenic	50.0%
!	TAAGCTTGCTCATTGCCACC+AGG	+	chr8.1:9555154-9555173	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	9554524	9555174	9554524	ID=MS.gene035238
chr8.1	mRNA	9554524	9555174	9554524	ID=MS.gene035238.t1;Parent=MS.gene035238
chr8.1	exon	9554524	9555174	9554524	ID=MS.gene035238.t1.exon1;Parent=MS.gene035238.t1
chr8.1	CDS	9554524	9555174	9554524	ID=cds.MS.gene035238.t1;Parent=MS.gene035238.t1

Gene Sequence

>MS.gene035238

ATGTCCTATGGTTTTGGAGATGATCAGTCAACAAATCATTACATCCCTTATATTCCATCAAACTTGGAGTTTTTCTCATTGAGAGACAATACATGGAAAGAAATTGAGTGTCCTGATCACTCCCCTTGTAGTAGTCCCGTTGATGATTATTCCGGAGTAGGGTCCCTTTGTAATGGGGCTATTCATTGGTTGGCTTTTCGTGATGATTTAAAAAAGGATGTTATTGTTTCCGTTGATTTAACAGAAAGGAAACTTTTAGATATAGATTTTCCAGATGATTATTATAACGGTTTTATTTGTGAACGTATGGATTGTGGTTTGTGGGTATTTGGAGAATTTCTCAGTCTATGCGCTAAGGGTTATCGTAATACAACTGAAATATGGGTGATGAAAGAATACAAAGTGAATTCGTCTTGGACTAAGACTCATGTTTTTTCTAATGATGTCCTTTACATTTGGTACTTTTCCCCAATTTGTTGTACAAAAAGTGGTGATATTATTGGAAGAGATGGTGGTACAGAAAGGTTGGTGAAGTATGATGACAATGGACAGTTGCTAGAGCATTGCTCCAATTGTAAGGATTCACGTGGTGGATATACTATGTATACAGACTCTTTGCTTTCACTCCCTGGTGGCAATGAGCAAGCTTAA

Protein sequence

>MS.gene035238.t1

MSYGFGDDQSTNHYIPYIPSNLEFFSLRDNTWKEIECPDHSPCSSPVDDYSGVGSLCNGAIHWLAFRDDLKKDVIVSVDLTERKLLDIDFPDDYYNGFICERMDCGLWVFGEFLSLCAKGYRNTTEIWVMKEYKVNSSWTKTHVFSNDVLYIWYFSPICCTKSGDIIGRDGGTERLVKYDDNGQLLEHCSNCKDSRGGYTMYTDSLLSLPGGNEQA