AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene57525


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57525.t1 MTR_8g433040 75.749 367 72 3 1 361 9 364 0.0 541
MS.gene57525.t1 MTR_8g032380 75.749 367 72 3 1 361 9 364 0.0 541
MS.gene57525.t1 MTR_8g032390 71.745 361 76 4 1 356 31 370 6.06e-175 491
MS.gene57525.t1 MTR_4g094365 57.534 365 144 5 5 361 3 364 2.14e-134 388
MS.gene57525.t1 MTR_4g122850 59.270 356 127 11 21 361 12 364 2.87e-129 375
MS.gene57525.t1 MTR_8g433030 59.834 361 86 8 1 356 31 337 8.70e-129 372
MS.gene57525.t1 MTR_3g103020 56.522 368 139 10 6 359 16 376 4.67e-128 372
MS.gene57525.t1 MTR_4g109270 55.801 362 141 11 10 359 8 362 4.64e-119 349
MS.gene57525.t1 MTR_3g034180 54.377 377 141 12 8 361 121 489 1.23e-117 350
MS.gene57525.t1 MTR_6g060650 55.795 371 138 11 9 359 7 371 3.49e-116 342
MS.gene57525.t1 MTR_4g117780 53.022 364 152 11 10 361 11 367 3.50e-115 339
MS.gene57525.t1 MTR_4g023080 54.190 358 146 9 8 359 7 352 5.95e-115 338
MS.gene57525.t1 MTR_4g021785 55.028 358 144 8 8 359 7 353 8.53e-115 338
MS.gene57525.t1 MTR_4g023090 52.846 369 149 9 9 356 15 379 2.36e-113 335
MS.gene57525.t1 MTR_4g117850 53.134 367 143 11 9 358 22 376 2.02e-111 330
MS.gene57525.t1 MTR_3g034130 55.331 347 127 10 8 333 7 346 2.23e-111 329
MS.gene57525.t1 MTR_4g117770 53.825 366 148 11 9 361 10 367 4.68e-111 328
MS.gene57525.t1 MTR_4g117810 53.825 366 148 11 9 361 10 367 4.68e-111 328
MS.gene57525.t1 MTR_4g109280 53.825 366 147 12 5 359 3 357 1.38e-110 327
MS.gene57525.t1 MTR_4g116330 52.279 373 154 12 1 357 12 376 1.39e-110 328
MS.gene57525.t1 MTR_3g034160 54.301 372 141 11 8 357 7 371 1.81e-109 325
MS.gene57525.t1 MTR_4g023070 50.933 375 150 10 10 359 3 368 2.22e-109 325
MS.gene57525.t1 MTR_4g117720 51.482 371 128 11 1 358 44 375 1.75e-107 320
MS.gene57525.t1 MTR_4g118380 55.367 354 125 9 9 334 7 355 2.15e-107 319
MS.gene57525.t1 MTR_4g023120 49.072 377 158 10 10 361 3 370 1.77e-104 312
MS.gene57525.t1 MTR_4g023380 49.614 389 148 10 3 361 9 379 3.92e-101 303
MS.gene57525.t1 MTR_4g023130 50.565 354 124 8 8 359 7 311 6.41e-101 301
MS.gene57525.t1 MTR_5g070130 50.811 370 155 13 9 357 10 373 8.65e-101 303
MS.gene57525.t1 MTR_5g070080 47.938 388 162 13 1 356 1 380 5.22e-98 296
MS.gene57525.t1 MTR_5g097210 49.326 371 161 12 3 358 2 360 2.76e-97 293
MS.gene57525.t1 MTR_4g023190 49.864 369 163 10 1 359 1 357 5.05e-97 292
MS.gene57525.t1 MTR_1g055135 47.644 382 163 14 2 359 5 373 1.10e-96 292
MS.gene57525.t1 MTR_4g023200 49.864 369 164 10 1 359 1 358 2.30e-95 288
MS.gene57525.t1 MTR_4g121580 47.541 366 145 11 3 351 4 339 2.23e-94 287
MS.gene57525.t1 MTR_4g023150 48.641 368 170 10 1 359 1 358 1.00e-93 284
MS.gene57525.t1 MTR_5g070088 45.876 388 167 13 4 356 1 380 4.39e-92 281
MS.gene57525.t1 MTR_4g023440 49.030 361 131 10 9 361 17 332 3.10e-89 271
MS.gene57525.t1 MTR_4g116330 46.113 373 138 12 1 357 12 337 3.98e-87 266
MS.gene57525.t1 MTR_1g055165 43.716 366 149 7 1 359 1 316 6.56e-84 258
MS.gene57525.t1 MTR_8g013010 54.478 268 106 7 5 263 49 309 3.83e-81 250
MS.gene57525.t1 MTR_4g117750 46.900 371 160 14 8 357 1 355 4.22e-78 248
MS.gene57525.t1 MTR_4g117750 57.273 110 44 2 254 360 373 482 1.60e-32 127
MS.gene57525.t1 MTR_4g117870 47.138 297 111 7 72 361 10 267 4.47e-76 236
MS.gene57525.t1 MTR_1g055195 48.958 288 112 12 86 357 206 474 1.69e-72 233
MS.gene57525.t1 MTR_4g118400 47.735 287 108 10 81 355 38 294 3.97e-69 219
MS.gene57525.t1 MTR_7g079370 42.609 345 172 13 39 361 16 356 9.19e-66 212
MS.gene57525.t1 MTR_4g116320 53.953 215 88 4 153 358 43 255 2.72e-63 202
MS.gene57525.t1 MTR_6g463430 55.102 196 79 5 170 361 12 202 4.28e-60 192
MS.gene57525.t1 MTR_8g040935 53.535 198 85 4 169 359 9 206 1.31e-59 191
MS.gene57525.t1 MTR_7g079400 44.291 289 135 11 88 359 56 335 1.87e-58 192
MS.gene57525.t1 MTR_4g116340 49.576 236 93 6 3 229 29 247 3.72e-58 189
MS.gene57525.t1 MTR_8g102520 37.330 367 167 13 6 359 4 320 2.87e-55 184
MS.gene57525.t1 MTR_4g118370 44.048 252 103 7 118 358 33 257 2.39e-53 177
MS.gene57525.t1 MTR_2g048580 36.096 374 184 16 1 356 1 337 2.87e-53 179
MS.gene57525.t1 MTR_1g055175 49.485 194 89 5 173 359 8 199 8.42e-51 168
MS.gene57525.t1 MTR_1g055250 46.009 213 97 7 146 347 47 252 2.91e-47 163
MS.gene57525.t1 MTR_4g117530 41.250 240 103 6 123 359 47 251 3.53e-45 155
MS.gene57525.t1 MTR_4g114700 39.382 259 96 7 106 352 9 218 4.90e-44 152
MS.gene57525.t1 MTR_7g117720 45.192 208 90 6 1 201 1 191 9.31e-43 150
MS.gene57525.t1 MTR_7g117720 51.724 87 35 3 277 356 186 272 1.47e-13 70.5
MS.gene57525.t1 MTR_4g117430 52.830 159 65 5 106 263 3 152 3.32e-42 144
MS.gene57525.t1 MTR_8g098830 40.513 195 103 7 167 355 28 215 1.31e-34 127
MS.gene57525.t1 MTR_7g079420 35.333 300 140 14 68 355 881 1138 4.37e-34 134
MS.gene57525.t1 MTR_4g118360 55.200 125 47 4 239 357 1 122 5.65e-32 117
MS.gene57525.t1 MTR_4g122860 40.838 191 78 5 179 361 157 320 7.06e-32 122
MS.gene57525.t1 MTR_4g122860 46.835 79 38 2 9 85 69 145 6.06e-11 63.5
MS.gene57525.t1 MTR_8g101580 29.640 361 226 12 10 353 45 394 7.67e-32 124
MS.gene57525.t1 MTR_5g023000 61.856 97 34 2 266 359 1 97 2.32e-31 114
MS.gene57525.t1 MTR_1g097490 29.775 356 224 11 10 353 49 390 2.56e-31 122
MS.gene57525.t1 MTR_2g021150 30.081 369 221 17 9 353 13 368 2.92e-31 122
MS.gene57525.t1 MTR_3g007330 32.459 305 160 10 10 293 48 327 7.38e-31 121
MS.gene57525.t1 MTR_5g057790 31.803 305 169 12 10 294 46 331 1.99e-30 120
MS.gene57525.t1 MTR_2g055970 30.295 373 212 14 8 353 209 560 3.82e-30 121
MS.gene57525.t1 MTR_3g009310 32.239 335 192 12 10 328 42 357 6.71e-30 118
MS.gene57525.t1 MTR_5g057710 31.596 307 167 12 10 294 46 331 8.87e-30 118
MS.gene57525.t1 MTR_1g094210 28.729 362 220 14 10 353 57 398 1.27e-29 118
MS.gene57525.t1 MTR_3g013740 31.464 321 163 15 10 294 44 343 2.74e-29 117
MS.gene57525.t1 MTR_4g107820 30.033 303 178 10 10 296 36 320 6.56e-29 115
MS.gene57525.t1 MTR_4g107780 30.033 303 178 10 10 296 36 320 6.56e-29 115
MS.gene57525.t1 MTR_8g467140 32.119 302 181 11 6 294 28 318 8.79e-29 114
MS.gene57525.t1 MTR_4g055060 30.563 373 214 15 10 353 30 386 9.93e-29 115
MS.gene57525.t1 MTR_4g107780 30.033 303 178 10 10 296 36 320 1.14e-28 115
MS.gene57525.t1 MTR_4g107820 30.033 303 178 10 10 296 36 320 1.15e-28 115
MS.gene57525.t1 MTR_1g094210 28.824 340 205 13 10 332 57 376 1.43e-28 115
MS.gene57525.t1 MTR_4g109290 42.138 159 54 3 9 162 8 133 1.54e-28 110
MS.gene57525.t1 MTR_3g007410 28.954 373 210 13 13 354 55 403 2.82e-28 114
MS.gene57525.t1 MTR_1g097560 29.121 364 212 14 10 353 36 373 5.22e-28 113
MS.gene57525.t1 MTR_3g014540 32.154 311 178 12 10 301 29 325 7.08e-28 112
MS.gene57525.t1 MTR_5g022420 29.795 292 183 11 9 294 26 301 9.29e-28 112
MS.gene57525.t1 MTR_4g030830 28.431 408 205 16 10 353 9 393 9.71e-28 112
MS.gene57525.t1 MTR_2g021155 31.922 307 184 10 10 301 33 329 1.64e-27 114
MS.gene57525.t1 MTR_2g021155 27.948 229 128 10 98 304 688 901 8.01e-12 67.0
MS.gene57525.t1 MTR_2g029990 28.255 361 231 13 11 353 52 402 2.19e-27 112
MS.gene57525.t1 MTR_2g426020 28.389 391 223 19 10 357 6 382 3.41e-27 111
MS.gene57525.t1 MTR_3g007360 28.418 373 212 13 13 354 55 403 4.43e-27 110
MS.gene57525.t1 MTR_4g108820 30.405 296 153 10 9 296 41 291 8.13e-27 108
MS.gene57525.t1 MTR_4g133170 25.706 354 219 14 10 338 4 338 8.76e-27 110
MS.gene57525.t1 MTR_5g057690 31.757 296 171 12 10 294 46 321 1.53e-26 109
MS.gene57525.t1 MTR_2g046920 27.760 317 181 9 4 296 18 310 1.89e-26 108
MS.gene57525.t1 MTR_2g028160 27.296 392 233 18 10 355 5 390 2.36e-26 109
MS.gene57525.t1 MTR_7g055930 27.990 418 221 17 10 353 13 424 4.23e-26 108
MS.gene57525.t1 MTR_1g050542 26.579 380 220 12 5 353 53 404 5.15e-26 108
MS.gene57525.t1 MTR_4g013180 27.778 378 222 15 8 342 9 378 5.46e-26 108
MS.gene57525.t1 MTR_1g097330 28.947 342 219 10 10 337 16 347 5.75e-26 108
MS.gene57525.t1 MTR_7g070880 28.385 384 206 16 10 332 21 396 1.18e-25 107
MS.gene57525.t1 MTR_3g014570 31.833 311 161 13 10 293 29 315 1.42e-25 106
MS.gene57525.t1 MTR_5g069120 41.935 155 81 4 20 166 1 154 1.44e-25 101
MS.gene57525.t1 MTR_7g079450 43.056 144 66 5 223 359 1 135 2.15e-25 100
MS.gene57525.t1 MTR_7g055870 28.162 419 219 18 10 353 13 424 2.94e-25 106
MS.gene57525.t1 MTR_3g006670 31.068 309 167 12 10 293 49 336 5.75e-25 105
MS.gene57525.t1 MTR_3g083640 30.097 309 181 13 10 302 55 344 9.42e-25 104
MS.gene57525.t1 MTR_3g013770 30.960 323 174 13 10 303 33 335 9.75e-25 104
MS.gene57525.t1 MTR_5g057020 30.612 294 172 10 10 294 46 316 9.92e-25 103
MS.gene57525.t1 MTR_6g021880 33.110 299 163 13 21 294 31 317 9.95e-25 103
MS.gene57525.t1 MTR_2g046900 27.224 371 241 14 4 353 22 384 1.07e-24 103
MS.gene57525.t1 MTR_2g024110 27.937 383 224 19 10 357 4 369 1.24e-24 103
MS.gene57525.t1 MTR_0667s0010 26.513 347 219 10 10 328 6 344 1.37e-24 103
MS.gene57525.t1 MTR_7g070830 28.650 363 193 15 10 314 21 375 1.47e-24 103
MS.gene57525.t1 MTR_7g056820 27.371 369 210 17 10 337 7 358 1.59e-24 103
MS.gene57525.t1 MTR_2g028130 27.151 372 219 16 10 336 5 369 3.68e-24 102
MS.gene57525.t1 MTR_4g061340 29.073 313 170 10 10 293 26 315 4.63e-24 102
MS.gene57525.t1 MTR_7g407070 30.421 309 179 13 10 289 32 333 5.20e-24 102
MS.gene57525.t1 MTR_7g070440 29.032 341 200 14 4 314 1 329 9.67e-24 101
MS.gene57525.t1 MTR_5g011200 31.561 301 179 15 10 294 17 306 9.71e-24 101
MS.gene57525.t1 MTR_4g037465 30.851 376 190 22 10 336 21 375 1.78e-23 100
MS.gene57525.t1 MTR_0064s0160 27.848 395 230 15 9 359 41 424 2.35e-23 100
MS.gene57525.t1 MTR_1g068835 27.759 299 190 9 10 293 4 291 2.37e-23 100
MS.gene57525.t1 MTR_3g036430 28.425 292 165 11 10 294 20 274 2.42e-23 99.8
MS.gene57525.t1 MTR_3g007430 27.815 302 178 8 13 293 46 328 2.53e-23 100
MS.gene57525.t1 MTR_1g054575 28.763 299 191 10 5 294 47 332 2.69e-23 101
MS.gene57525.t1 MTR_6g034720 48.305 118 54 3 129 240 53 169 2.93e-23 96.7
MS.gene57525.t1 MTR_3g036290 29.006 362 212 17 10 353 22 356 4.05e-23 99.4
MS.gene57525.t1 MTR_3g464470 28.608 395 221 16 4 353 1 379 4.34e-23 99.4
MS.gene57525.t1 MTR_3g010390 27.812 320 190 13 10 299 33 341 5.28e-23 99.4
MS.gene57525.t1 MTR_3g011060 29.573 328 174 13 10 302 28 333 9.35e-23 98.6
MS.gene57525.t1 MTR_3g464500 29.323 399 216 19 4 353 21 402 1.07e-22 98.6
MS.gene57525.t1 MTR_7g060940 28.659 328 182 10 8 300 20 330 1.15e-22 98.6
MS.gene57525.t1 MTR_2g031720 28.989 376 227 17 10 357 6 369 1.37e-22 98.2
MS.gene57525.t1 MTR_2g028110 27.249 378 231 16 10 359 4 365 1.62e-22 97.8
MS.gene57525.t1 MTR_3g007270 29.560 318 184 15 10 301 47 350 1.90e-22 97.8
MS.gene57525.t1 MTR_6g017280 26.396 394 237 17 4 353 3 387 2.16e-22 97.4
MS.gene57525.t1 MTR_3g009240 29.431 299 170 11 10 289 36 312 2.40e-22 97.4
MS.gene57525.t1 MTR_1g068860 27.759 299 192 9 10 293 4 293 2.76e-22 97.1
MS.gene57525.t1 MTR_2g046830 28.025 314 184 10 4 296 19 311 3.36e-22 97.1
MS.gene57525.t1 MTR_1g068875 27.425 299 190 11 10 293 4 290 5.30e-22 96.3
MS.gene57525.t1 MTR_1g055070 31.274 259 150 11 10 243 49 304 6.51e-22 96.3
MS.gene57525.t1 MTR_0044s0300 28.339 307 174 13 10 294 38 320 7.98e-22 95.9
MS.gene57525.t1 MTR_2g426070 27.244 312 193 9 11 293 7 313 1.39e-21 95.5
MS.gene57525.t1 MTR_6g053240 27.950 322 179 12 10 300 28 327 1.61e-21 95.1
MS.gene57525.t1 MTR_1g115160 28.912 294 187 12 8 294 20 298 1.66e-21 94.7
MS.gene57525.t1 MTR_2g031640 26.133 375 235 15 10 357 6 365 1.71e-21 95.1
MS.gene57525.t1 MTR_2g021770 28.469 418 224 21 1 356 1 405 1.86e-21 95.1
MS.gene57525.t1 MTR_5g096710 28.389 391 218 17 10 353 23 398 2.02e-21 94.7
MS.gene57525.t1 MTR_2g021190 27.869 305 184 11 10 294 21 309 2.59e-21 94.4
MS.gene57525.t1 MTR_4g019990 26.434 401 220 14 9 352 5 387 3.08e-21 94.4
MS.gene57525.t1 MTR_5g056020 27.073 410 227 18 10 353 17 420 3.11e-21 95.1
MS.gene57525.t1 MTR_8g073550 34.171 199 100 10 9 188 29 215 3.50e-21 91.3
MS.gene57525.t1 MTR_8g464770 27.034 381 230 13 9 355 11 377 3.54e-21 94.0
MS.gene57525.t1 MTR_0128s0020 29.167 384 222 19 1 349 10 378 3.98e-21 94.0
MS.gene57525.t1 MTR_8g062660 27.245 323 187 11 1 294 13 316 4.11e-21 95.1
MS.gene57525.t1 MTR_3g436150 29.043 303 185 11 10 289 32 327 4.14e-21 94.0
MS.gene57525.t1 MTR_2g426060 28.616 318 182 16 10 293 6 312 4.43e-21 94.0
MS.gene57525.t1 MTR_7g066100 27.586 406 221 17 6 355 7 395 5.53e-21 93.6
MS.gene57525.t1 MTR_2g031680 26.421 299 193 9 10 293 6 292 5.66e-21 93.6
MS.gene57525.t1 MTR_5g069760 27.371 369 201 16 8 333 4 348 6.07e-21 93.2
MS.gene57525.t1 MTR_4g033495 26.448 397 226 17 10 356 27 407 6.14e-21 94.0
MS.gene57525.t1 MTR_4g031770 28.197 305 181 13 10 294 4 290 6.30e-21 93.2
MS.gene57525.t1 MTR_3g083010 27.569 399 227 18 10 355 6 395 6.65e-21 93.6
MS.gene57525.t1 MTR_3g023930 30.479 292 170 12 10 294 34 299 6.87e-21 93.2
MS.gene57525.t1 MTR_3g010520 29.530 298 166 12 10 294 25 291 7.10e-21 92.8
MS.gene57525.t1 MTR_2g047832 28.049 328 186 14 4 296 23 335 8.65e-21 93.2
MS.gene57525.t1 MTR_3g009260 28.772 285 187 8 10 289 41 314 9.62e-21 92.8
MS.gene57525.t1 MTR_4g129160 29.290 338 182 14 4 293 1 329 9.69e-21 92.4
MS.gene57525.t1 MTR_7g056760 27.966 354 195 15 8 314 21 361 9.96e-21 92.8
MS.gene57525.t1 MTR_3g010970 28.302 371 206 17 13 353 51 391 1.43e-20 92.4
MS.gene57525.t1 MTR_2g021800 26.173 405 233 14 9 354 15 412 1.52e-20 92.4
MS.gene57525.t1 MTR_7g062100 27.649 387 223 18 10 353 24 396 1.74e-20 92.0
MS.gene57525.t1 MTR_0115s0020 25.954 393 236 16 10 354 10 395 1.97e-20 92.0
MS.gene57525.t1 MTR_7g055977 26.055 403 224 18 4 354 1 381 2.45e-20 91.7
MS.gene57525.t1 MTR_6g090180 27.415 383 223 14 2 335 37 413 2.50e-20 92.0
MS.gene57525.t1 MTR_3g024150 30.693 303 166 16 13 294 38 317 2.52e-20 91.7
MS.gene57525.t1 MTR_3g030250 27.869 305 170 13 10 294 37 311 2.65e-20 91.7
MS.gene57525.t1 MTR_1g088120 28.358 335 188 14 1 293 1 325 2.81e-20 91.7
MS.gene57525.t1 MTR_2g078900 28.620 297 185 11 10 294 33 314 3.50e-20 90.9
MS.gene57525.t1 MTR_1g054725 26.804 388 210 14 9 353 19 375 4.01e-20 90.9
MS.gene57525.t1 MTR_7g013590 32.895 304 165 15 13 294 39 325 4.23e-20 91.3
MS.gene57525.t1 MTR_1g056710 29.841 315 181 16 10 303 34 329 4.29e-20 90.9
MS.gene57525.t1 MTR_2g461450 28.231 294 185 8 10 293 18 295 5.19e-20 90.5
MS.gene57525.t1 MTR_0760s0010 30.584 291 172 13 15 294 52 323 5.22e-20 90.9
MS.gene57525.t1 MTR_5g007610 29.677 310 178 13 10 293 41 336 5.94e-20 90.9
MS.gene57525.t1 MTR_0831s0010 24.490 392 239 14 3 354 43 417 6.08e-20 90.9
MS.gene57525.t1 MTR_0128s0070 27.577 388 222 16 10 352 22 395 6.82e-20 90.5
MS.gene57525.t1 MTR_6g065980 29.110 292 170 14 10 289 16 282 6.88e-20 90.1
MS.gene57525.t1 MTR_7g445890 24.679 389 226 16 10 353 16 382 7.96e-20 90.1
MS.gene57525.t1 MTR_2g078850 30.565 301 171 15 13 294 33 314 1.02e-19 89.7
MS.gene57525.t1 MTR_2g028140 24.924 329 190 12 10 293 5 321 1.03e-19 90.1
MS.gene57525.t1 MTR_6g016285 26.471 408 229 16 8 353 19 417 1.06e-19 90.1
MS.gene57525.t1 MTR_4g129190 26.142 394 233 15 10 354 6 390 1.06e-19 89.7
MS.gene57525.t1 MTR_3g010920 26.796 362 223 14 10 353 44 381 1.08e-19 89.7
MS.gene57525.t1 MTR_2g025420 24.627 402 230 15 10 353 6 392 1.19e-19 90.1
MS.gene57525.t1 MTR_7g028660 28.267 329 184 12 8 300 9 321 1.25e-19 89.4
MS.gene57525.t1 MTR_2g021210 29.730 296 179 12 10 294 84 361 2.00e-19 89.4
MS.gene57525.t1 MTR_3g024110 28.188 298 189 10 10 298 101 382 2.27e-19 89.4
MS.gene57525.t1 MTR_7g060960 26.923 312 171 10 8 299 30 304 2.35e-19 88.6
MS.gene57525.t1 MTR_3g010870 28.239 301 179 11 10 294 37 316 2.72e-19 88.6
MS.gene57525.t1 MTR_3g072470 29.607 331 168 14 10 293 19 331 2.73e-19 89.0
MS.gene57525.t1 MTR_7g066030 27.020 396 233 16 6 354 17 403 3.17e-19 88.6
MS.gene57525.t1 MTR_3g010620 28.618 304 172 12 8 294 31 306 3.78e-19 88.2
MS.gene57525.t1 MTR_7g056003 28.291 357 184 15 13 314 18 357 4.12e-19 88.2
MS.gene57525.t1 MTR_6g027910 28.533 375 222 18 13 353 12 374 4.56e-19 87.8
MS.gene57525.t1 MTR_3g006500 27.200 375 220 16 10 353 17 369 4.73e-19 87.8
MS.gene57525.t1 MTR_7g007300 27.922 308 174 14 7 294 100 379 5.22e-19 88.2
MS.gene57525.t1 MTR_7g066850 25.436 401 229 17 10 356 23 407 5.81e-19 88.2
MS.gene57525.t1 MTR_7g066000 27.027 370 219 16 8 336 23 382 6.51e-19 87.8
MS.gene57525.t1 MTR_2g104340 25.964 389 240 14 9 356 13 394 1.09e-18 87.0
MS.gene57525.t1 MTR_6g053260 28.076 317 180 12 10 300 337 631 1.13e-18 87.8
MS.gene57525.t1 MTR_6g007135 26.797 306 193 10 10 294 26 321 1.16e-18 86.7
MS.gene57525.t1 MTR_0649s0020 27.493 371 206 19 10 333 11 365 1.41e-18 86.7
MS.gene57525.t1 MTR_4g030110 26.531 392 201 18 1 338 21 379 1.51e-18 86.3
MS.gene57525.t1 MTR_8g099460 27.010 311 186 12 10 293 5 301 1.54e-18 86.7
MS.gene57525.t1 MTR_3g036335 27.797 295 185 10 10 289 41 322 1.59e-18 86.7
MS.gene57525.t1 MTR_2g026010 26.159 302 197 10 10 293 4 297 1.59e-18 86.7
MS.gene57525.t1 MTR_3g011100 30.519 308 173 14 10 293 235 525 1.77e-18 87.0
MS.gene57525.t1 MTR_3g024040 30.070 286 172 12 17 293 38 304 2.29e-18 85.9
MS.gene57525.t1 MTR_6g092560 24.495 396 243 16 8 355 10 397 2.38e-18 86.3
MS.gene57525.t1 MTR_2g021050 27.564 312 167 15 10 293 5 285 2.50e-18 85.9
MS.gene57525.t1 MTR_7g056390 28.955 335 166 14 10 293 18 331 2.56e-18 85.9
MS.gene57525.t1 MTR_7g052670 24.510 408 244 17 8 353 19 424 2.74e-18 86.3
MS.gene57525.t1 MTR_7g061060 25.905 359 189 15 7 314 10 342 3.13e-18 85.5
MS.gene57525.t1 MTR_5g069930 25.000 368 218 16 8 333 4 355 3.65e-18 85.1
MS.gene57525.t1 MTR_4g030980 24.088 411 219 12 10 340 15 412 3.66e-18 85.5
MS.gene57525.t1 MTR_4g023430 55.952 84 31 2 1 80 32 113 3.73e-18 82.8
MS.gene57525.t1 MTR_4g023430 43.269 104 53 2 264 361 119 222 2.93e-15 74.7
MS.gene57525.t1 MTR_7g067680 27.152 302 177 9 10 298 49 320 4.12e-18 85.1
MS.gene57525.t1 MTR_2g025960 27.473 273 151 15 103 336 5 269 4.32e-18 84.3
MS.gene57525.t1 MTR_4g014370 24.146 410 237 17 9 356 10 407 4.67e-18 85.1
MS.gene57525.t1 MTR_1g055375 27.441 379 218 19 13 353 7 366 4.85e-18 84.7
MS.gene57525.t1 MTR_3g010590 29.043 303 167 13 10 294 39 311 4.87e-18 85.1
MS.gene57525.t1 MTR_2g043400 27.204 397 219 17 8 349 21 402 5.24e-18 85.1
MS.gene57525.t1 MTR_5g069390 25.485 412 232 17 9 361 25 420 6.10e-18 85.5
MS.gene57525.t1 MTR_1g061330 24.934 377 237 13 10 359 4 361 6.14e-18 84.7
MS.gene57525.t1 MTR_3g006570 27.244 312 174 12 10 294 21 306 6.23e-18 84.7
MS.gene57525.t1 MTR_7g062060 25.248 404 230 18 9 354 11 400 6.49e-18 84.7
MS.gene57525.t1 MTR_5g046300 28.328 293 180 12 10 289 4 279 6.85e-18 84.3
MS.gene57525.t1 MTR_5g046290 28.328 293 180 12 10 289 4 279 6.85e-18 84.3
MS.gene57525.t1 MTR_2g043410 28.875 329 173 13 8 293 20 330 7.04e-18 84.7
MS.gene57525.t1 MTR_7g055830 26.010 396 195 16 10 356 13 359 7.21e-18 84.3
MS.gene57525.t1 MTR_5g057643 30.137 219 122 9 10 210 46 251 8.23e-18 82.8
MS.gene57525.t1 MTR_2g425980 27.110 391 229 19 10 357 5 382 8.32e-18 84.3
MS.gene57525.t1 MTR_6g017305 27.715 267 157 12 120 353 18 281 8.46e-18 82.8
MS.gene57525.t1 MTR_0464s0020 28.485 330 185 13 8 293 21 343 9.18e-18 84.3
MS.gene57525.t1 MTR_2g024100 27.414 321 193 13 12 302 9 319 1.02e-17 84.3
MS.gene57525.t1 MTR_7g061050 27.187 320 182 11 7 293 10 311 1.13e-17 84.0
MS.gene57525.t1 MTR_3g030330 28.571 294 185 10 10 294 20 297 1.14e-17 83.6
MS.gene57525.t1 MTR_2g437110 24.872 390 232 17 8 353 20 392 1.46e-17 84.3
MS.gene57525.t1 MTR_6g055210 26.406 409 227 19 9 353 21 419 1.46e-17 84.0
MS.gene57525.t1 MTR_4g080200 25.538 372 225 13 8 354 1 345 1.48e-17 83.2
MS.gene57525.t1 MTR_7g077970 27.950 322 192 11 10 293 7 326 1.50e-17 84.0
MS.gene57525.t1 MTR_7g035295 23.342 377 207 15 10 336 16 360 1.63e-17 83.6
MS.gene57525.t1 MTR_1g442850 27.368 380 201 18 9 335 4 361 1.86e-17 83.2
MS.gene57525.t1 MTR_7g091630 24.090 357 220 14 3 314 25 375 1.91e-17 83.6
MS.gene57525.t1 MTR_4g117550 26.161 409 188 17 9 356 16 371 2.42e-17 82.8
MS.gene57525.t1 MTR_5g048160 24.615 390 244 16 10 354 4 388 2.47e-17 82.8
MS.gene57525.t1 MTR_5g037680 25.000 388 235 17 9 353 7 381 2.58e-17 83.2
MS.gene57525.t1 MTR_2g021252 25.000 360 228 13 13 354 50 385 2.77e-17 82.8
MS.gene57525.t1 MTR_5g046260 27.368 285 163 13 10 289 4 249 3.26e-17 81.6
MS.gene57525.t1 MTR_2g022000 24.460 417 236 15 9 361 15 416 3.71e-17 82.8
MS.gene57525.t1 MTR_3g010430 26.498 317 172 12 10 294 36 323 4.36e-17 82.4
MS.gene57525.t1 MTR_3g030350 25.745 369 236 15 10 353 35 390 5.59e-17 82.0
MS.gene57525.t1 MTR_4g013175 25.304 411 228 18 1 342 1 401 5.72e-17 82.0
MS.gene57525.t1 MTR_4g031020 25.304 411 220 16 7 340 12 412 8.37e-17 81.6
MS.gene57525.t1 MTR_7g056170 25.935 428 208 18 1 353 66 459 8.52e-17 81.6
MS.gene57525.t1 MTR_4g013185 24.939 409 236 15 1 344 1 403 9.36e-17 81.6
MS.gene57525.t1 MTR_6g004660 28.391 317 186 10 10 298 16 319 9.56e-17 81.3
MS.gene57525.t1 MTR_7g056200 24.557 395 217 14 7 353 20 381 9.60e-17 81.3
MS.gene57525.t1 MTR_2g047892 25.405 370 210 17 10 332 22 372 9.75e-17 81.3
MS.gene57525.t1 MTR_7g056710 27.083 384 219 19 9 352 17 379 1.02e-16 80.9
MS.gene57525.t1 MTR_0128s0010 27.044 318 189 13 3 289 14 319 1.22e-16 80.9
MS.gene57525.t1 MTR_7g055987 26.866 335 188 16 13 312 23 335 1.40e-16 80.5
MS.gene57525.t1 MTR_7g050520 27.528 356 205 17 8 326 20 359 2.43e-16 80.1
MS.gene57525.t1 MTR_4g102410 25.432 405 247 17 1 356 50 448 2.44e-16 80.5
MS.gene57525.t1 MTR_4g030760 25.195 385 218 15 10 352 73 429 3.10e-16 80.1
MS.gene57525.t1 MTR_0054s0090 25.971 412 234 20 2 356 7 404 3.27e-16 79.7
MS.gene57525.t1 MTR_7g061090 26.364 330 185 13 8 293 20 335 3.69e-16 79.7
MS.gene57525.t1 MTR_3g007300 28.477 302 150 12 10 293 49 302 4.67e-16 79.0
MS.gene57525.t1 MTR_4g006270 27.458 295 167 13 10 287 4 268 5.04e-16 79.3
MS.gene57525.t1 MTR_7g050480 27.171 357 205 17 8 326 20 359 5.67e-16 79.0
MS.gene57525.t1 MTR_7g056260 28.349 321 178 15 8 293 12 315 5.99e-16 78.2
MS.gene57525.t1 MTR_7g066010 24.427 393 214 14 6 354 17 370 7.43e-16 78.6
MS.gene57525.t1 MTR_5g023570 41.346 104 59 1 9 112 36 137 7.47e-16 74.3
MS.gene57525.t1 MTR_7g078040 28.274 336 182 14 10 293 9 337 7.57e-16 79.0
MS.gene57525.t1 MTR_0242s0060 28.746 327 183 16 8 293 7 324 7.89e-16 78.6
MS.gene57525.t1 MTR_0242s0040 28.746 327 183 16 8 293 7 324 7.89e-16 78.6
MS.gene57525.t1 MTR_4g030090 26.129 310 191 10 10 289 14 315 8.27e-16 78.6
MS.gene57525.t1 MTR_1g007450 25.620 363 228 12 1 324 1 360 9.92e-16 78.2
MS.gene57525.t1 MTR_7g061010 28.238 386 217 16 8 352 20 386 1.02e-15 78.2
MS.gene57525.t1 MTR_4g122840 39.259 135 45 4 230 361 164 264 1.02e-15 76.6
MS.gene57525.t1 MTR_3g009250 30.288 208 134 5 13 216 44 244 1.06e-15 76.3
MS.gene57525.t1 MTR_7g066060 25.000 392 240 15 9 353 22 406 1.38e-15 78.2
MS.gene57525.t1 MTR_7g057270 27.129 317 194 12 10 293 26 338 1.41e-15 77.8
MS.gene57525.t1 MTR_1g009110 27.049 366 221 18 2 337 7 356 1.66e-15 77.4
MS.gene57525.t1 MTR_5g092850 24.265 408 223 20 9 354 15 398 1.80e-15 77.4
MS.gene57525.t1 MTR_7g078840 27.794 349 190 17 1 293 1 343 2.36e-15 77.4
MS.gene57525.t1 MTR_5g096630 22.302 417 252 11 1 356 7 412 2.58e-15 77.0
MS.gene57525.t1 MTR_4g011660 23.729 413 232 17 10 353 19 417 2.64e-15 77.0
MS.gene57525.t1 MTR_4g024890 23.196 388 243 13 9 353 9 384 2.96e-15 76.6
MS.gene57525.t1 MTR_3g023940 26.287 369 228 15 10 353 34 383 3.13e-15 76.6
MS.gene57525.t1 MTR_3g437520 27.300 337 183 14 8 293 21 346 3.25e-15 77.0
MS.gene57525.t1 MTR_8g063440 24.129 402 234 16 1 354 1 379 3.84e-15 76.3
MS.gene57525.t1 MTR_1g007410 24.496 347 189 12 9 300 21 349 4.10e-15 76.3
MS.gene57525.t1 MTR_3g011120 26.627 338 198 15 9 313 13 333 4.11e-15 76.3
MS.gene57525.t1 MTR_0054s0100 25.845 414 234 20 2 356 7 406 4.57e-15 76.3
MS.gene57525.t1 MTR_3g011650 31.163 215 124 8 13 216 82 283 4.85e-15 75.1
MS.gene57525.t1 MTR_3g024130 25.651 269 163 11 93 338 48 302 6.21e-15 75.1
MS.gene57525.t1 MTR_7g017040 23.333 390 245 14 9 354 15 394 9.06e-15 75.5
MS.gene57525.t1 MTR_7g077990 27.187 320 169 14 10 289 17 312 1.40e-14 74.7
MS.gene57525.t1 MTR_7g079640 25.936 374 224 14 9 349 12 365 1.45e-14 74.7
MS.gene57525.t1 MTR_1g015740 24.217 351 195 13 10 342 8 305 1.52e-14 73.9
MS.gene57525.t1 MTR_5g057040 32.948 173 86 8 10 164 46 206 1.71e-14 75.5
MS.gene57525.t1 MTR_1g023400 25.824 364 230 18 13 354 6 351 1.83e-14 73.9
MS.gene57525.t1 MTR_2g047200 25.474 369 224 18 10 338 20 377 2.16e-14 74.3
MS.gene57525.t1 MTR_2g021950 22.396 384 255 10 9 354 15 393 2.22e-14 74.3
MS.gene57525.t1 MTR_1g068905 28.631 241 143 9 10 243 4 222 2.26e-14 73.6
MS.gene57525.t1 MTR_7g091640 25.926 324 198 17 3 293 28 342 2.48e-14 73.9
MS.gene57525.t1 MTR_8g064890 24.112 394 231 17 9 356 15 386 2.66e-14 73.9
MS.gene57525.t1 MTR_0097s0030 25.000 376 210 17 10 340 14 362 2.69e-14 73.9
MS.gene57525.t1 MTR_2g047240 25.000 376 210 17 10 340 14 362 2.69e-14 73.9
MS.gene57525.t1 MTR_5g097330 24.877 406 242 16 1 354 5 399 2.82e-14 73.9
MS.gene57525.t1 MTR_7g079160 25.490 408 216 17 8 337 6 403 3.38e-14 73.9
MS.gene57525.t1 MTR_7g022600 26.341 410 225 18 10 353 23 421 4.21e-14 73.6
MS.gene57525.t1 MTR_6g048140 28.395 324 171 15 10 300 39 334 5.33e-14 73.2
MS.gene57525.t1 MTR_7g052150 26.498 317 193 12 8 297 20 323 5.70e-14 72.8
MS.gene57525.t1 MTR_5g096900 28.082 292 160 11 9 263 11 289 7.32e-14 72.0
MS.gene57525.t1 MTR_8g046310 24.011 379 238 14 9 355 15 375 7.36e-14 72.4
MS.gene57525.t1 MTR_7g056797 26.582 316 185 13 8 287 21 325 7.52e-14 72.8
MS.gene57525.t1 MTR_1g071010 25.260 384 233 17 11 353 16 386 7.93e-14 72.4
MS.gene57525.t1 MTR_3g096250 30.169 295 147 13 10 294 47 292 7.97e-14 72.0
MS.gene57525.t1 MTR_6g478230 23.232 396 240 16 9 356 26 405 8.47e-14 72.4
MS.gene57525.t1 MTR_1g055200 52.055 73 28 2 102 173 5 71 8.54e-14 67.4
MS.gene57525.t1 MTR_2g031700 27.966 236 140 7 10 231 6 225 9.09e-14 71.2
MS.gene57525.t1 MTR_5g009060 29.290 338 165 15 10 293 25 342 1.07e-13 72.0
MS.gene57525.t1 MTR_3g058440 30.364 247 131 10 10 231 35 265 1.15e-13 71.2
MS.gene57525.t1 MTR_7g066840 25.000 404 230 19 5 356 18 400 1.44e-13 71.6
MS.gene57525.t1 MTR_1g055055 25.000 300 181 10 10 295 26 295 1.66e-13 71.2
MS.gene57525.t1 MTR_7g009265 25.155 322 185 15 84 354 8 324 1.83e-13 70.9
MS.gene57525.t1 MTR_7g077070 26.331 338 191 15 10 297 16 345 2.02e-13 71.2
MS.gene57525.t1 MTR_5g059430 23.833 407 244 18 9 356 25 424 2.26e-13 71.2
MS.gene57525.t1 MTR_5g008530 62.500 48 18 0 8 55 16 63 2.33e-13 65.1
MS.gene57525.t1 MTR_7g056737 26.861 309 191 10 8 293 20 316 2.35e-13 71.2
MS.gene57525.t1 MTR_5g068040 25.641 312 184 9 8 293 14 303 2.36e-13 70.9
MS.gene57525.t1 MTR_8g066440 26.970 330 178 16 11 293 24 337 3.61e-13 70.5
MS.gene57525.t1 MTR_6g017270 28.788 198 119 8 10 188 9 203 3.88e-13 70.1
MS.gene57525.t1 MTR_4g028510 25.253 396 236 19 10 356 16 400 3.92e-13 70.5
MS.gene57525.t1 MTR_0129s0070 25.000 392 227 16 12 354 19 392 4.26e-13 70.5
MS.gene57525.t1 MTR_8g013005 59.649 57 21 1 305 359 1 57 4.48e-13 63.9
MS.gene57525.t1 MTR_3g058470 28.618 304 162 12 10 294 37 304 4.58e-13 70.1
MS.gene57525.t1 MTR_6g017295 25.899 278 151 13 85 314 19 289 4.72e-13 70.5
MS.gene57525.t1 MTR_2g010950 24.860 358 226 12 10 331 20 370 5.26e-13 70.1
MS.gene57525.t1 MTR_7g056717 27.895 380 212 21 15 353 27 385 7.38e-13 69.3
MS.gene57525.t1 MTR_2g010920 25.587 383 212 19 10 331 20 390 7.71e-13 69.7
MS.gene57525.t1 MTR_4g028660 23.590 390 245 15 9 354 15 395 1.11e-12 68.9
MS.gene57525.t1 MTR_4g027450 23.590 390 245 15 9 354 15 395 1.11e-12 68.9
MS.gene57525.t1 MTR_5g056990 31.447 159 96 4 140 294 27 176 1.24e-12 67.4
MS.gene57525.t1 MTR_5g064700 23.077 312 185 15 93 356 62 366 1.38e-12 68.6
MS.gene57525.t1 MTR_1g097370 28.395 162 105 4 149 302 135 293 1.39e-12 68.9
MS.gene57525.t1 MTR_1g037540 25.320 391 216 19 10 339 5 380 1.41e-12 68.6
MS.gene57525.t1 MTR_2g104280 23.951 405 253 13 1 356 5 403 1.75e-12 68.6
MS.gene57525.t1 MTR_3g080370 26.718 393 215 17 24 353 35 417 2.50e-12 68.2
MS.gene57525.t1 MTR_1g112930 28.428 299 182 15 10 294 25 305 3.71e-12 67.4
MS.gene57525.t1 MTR_5g097820 26.721 247 146 8 2 217 15 257 4.11e-12 66.2
MS.gene57525.t1 MTR_4g028750 26.190 336 191 14 1 289 4 329 4.62e-12 67.0
MS.gene57525.t1 MTR_6g013270 26.433 314 189 14 5 294 24 319 6.51e-12 66.6
MS.gene57525.t1 MTR_2g033410 25.723 346 199 16 1 316 1 318 7.03e-12 66.2
MS.gene57525.t1 MTR_7g445750 24.679 312 199 9 8 284 21 331 1.06e-11 65.5
MS.gene57525.t1 MTR_8g467670 24.479 384 225 15 9 351 13 372 1.11e-11 65.9
MS.gene57525.t1 MTR_3g058480 29.771 262 147 11 10 247 39 287 1.12e-11 65.5
MS.gene57525.t1 MTR_7g050490 30.808 198 104 8 8 187 6 188 1.29e-11 63.5
MS.gene57525.t1 MTR_0627s0010 25.138 362 201 14 10 314 38 386 1.59e-11 65.5
MS.gene57525.t1 MTR_2g078870 28.977 176 109 8 119 294 78 237 1.67e-11 64.7
MS.gene57525.t1 MTR_3g009300 25.344 363 202 19 13 353 37 352 1.95e-11 65.1
MS.gene57525.t1 MTR_2g046860 26.699 206 140 7 97 296 3 203 2.47e-11 64.3
MS.gene57525.t1 MTR_6g034830 36.607 112 57 2 3 112 13 112 3.06e-11 60.5
MS.gene57525.t1 MTR_1g029650 21.374 393 253 14 10 358 8 388 3.06e-11 64.7
MS.gene57525.t1 MTR_2g010900 24.843 318 205 11 28 314 1 315 3.80e-11 64.3
MS.gene57525.t1 MTR_3g030320 27.273 176 119 4 119 294 62 228 4.56e-11 63.5
MS.gene57525.t1 MTR_1g055145 41.071 112 53 6 205 312 130 232 5.52e-11 63.2
MS.gene57525.t1 MTR_1g055145 40.816 98 49 3 13 104 36 130 9.91e-11 62.4
MS.gene57525.t1 MTR_7g069550 24.242 396 227 18 10 350 14 391 5.98e-11 63.5
MS.gene57525.t1 MTR_3g010870 28.636 220 123 9 10 213 37 238 6.03e-11 63.2
MS.gene57525.t1 MTR_1g112010 23.794 311 196 10 36 326 6 295 7.33e-11 63.2
MS.gene57525.t1 MTR_6g048120 23.585 318 188 10 10 294 36 331 8.61e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57525.t1 AT3G06240 28.750 400 221 16 6 353 32 419 6.22e-29 116
MS.gene57525.t1 AT3G23880 28.571 343 210 14 10 334 14 339 7.83e-24 101
MS.gene57525.t1 AT4G12560 27.457 346 207 14 10 327 4 333 1.34e-20 92.8
MS.gene57525.t1 AT4G12560 27.457 346 207 14 10 327 4 333 1.34e-20 92.8
MS.gene57525.t1 AT4G12560 27.457 346 207 14 10 327 4 333 1.34e-20 92.8
MS.gene57525.t1 AT5G49610 29.003 331 183 16 5 308 3 308 3.77e-20 90.9
MS.gene57525.t1 AT3G10430 29.137 278 150 13 10 267 5 255 9.83e-17 80.9
MS.gene57525.t1 AT3G07870 25.321 312 194 10 10 293 28 328 3.46e-15 76.6
MS.gene57525.t1 AT4G22390 24.202 376 246 16 11 357 5 370 3.64e-15 76.6
MS.gene57525.t1 AT4G22390 24.202 376 246 16 11 357 5 370 4.01e-15 76.6
MS.gene57525.t1 AT3G16590 28.125 288 174 12 10 279 5 277 1.42e-14 74.7
MS.gene57525.t1 AT4G21240 24.359 312 202 9 10 305 36 329 2.49e-13 71.2
MS.gene57525.t1 AT4G04690 27.854 219 128 8 10 216 11 211 5.60e-13 69.7
MS.gene57525.t1 AT1G33530 25.676 296 180 13 10 290 97 367 1.46e-12 68.9
MS.gene57525.t1 AT3G08750 29.218 243 135 14 10 239 12 230 2.16e-12 68.2
MS.gene57525.t1 AT4G19940 24.576 354 211 13 10 326 35 369 2.19e-12 68.2
MS.gene57525.t1 AT1G12870 22.539 386 241 18 10 351 33 404 4.77e-12 67.4
MS.gene57525.t1 AT3G17490 24.172 302 185 12 9 288 5 284 1.12e-11 65.9
MS.gene57525.t1 AT3G22650 23.473 311 186 15 6 289 5 290 1.86e-11 65.5
MS.gene57525.t1 AT1G13200 22.000 400 247 17 10 353 43 433 2.29e-11 65.1
MS.gene57525.t1 AT1G32420 26.829 287 167 13 10 280 37 296 2.34e-11 64.3
MS.gene57525.t1 AT3G22650 23.151 311 176 15 6 289 5 279 2.97e-11 64.7
MS.gene57525.t1 AT1G30790 28.897 263 159 10 3 244 2 257 3.15e-11 64.7
MS.gene57525.t1 AT2G27520 23.432 303 186 12 7 296 3 272 4.73e-11 63.9

Find 86 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTGCCTTTGATTTAA+TGG 0.094561 8.3:-61961721 MS.gene57525:CDS
TACCATCTTTATGAAATTAA+AGG 0.194448 8.3:-61962110 MS.gene57525:CDS
ATAATCCGGCACTTGAAATA+TGG 0.213121 8.3:-61961590 MS.gene57525:CDS
GGCCATAGTCCTGTGTATTA+TGG 0.224581 8.3:-61961660 MS.gene57525:CDS
ATTCCTCTTCCGGATGATTT+TGG 0.227499 8.3:-61961681 MS.gene57525:CDS
TATTATGGTTTGTGGGTATT+TGG 0.243259 8.3:-61961645 MS.gene57525:CDS
CGATGTCAGCTATATGGTTT+TGG 0.284001 8.3:-61961966 MS.gene57525:CDS
TCGATGGTATGCATGTAATT+TGG 0.287079 8.3:+61961986 None:intergenic
GAAATACCTTTGTCCCCTTA+TGG 0.287603 8.3:-61962011 MS.gene57525:CDS
TTGGAGAATTTCTCAGTCTA+TGG 0.288501 8.3:-61961626 MS.gene57525:CDS
AAAGCAGGATCATTCTTTAA+TGG 0.307314 8.3:-61961792 MS.gene57525:CDS
TGAAACAGAATCATGGTTAA+TGG 0.320662 8.3:+61962163 None:intergenic
AAGCAGGATCATTCTTTAAT+GGG 0.325706 8.3:-61961791 MS.gene57525:CDS
TCAAGAACTCCACCTCTTGA+TGG 0.326957 8.3:-61962212 MS.gene57525:CDS
TACCATCGATGTCAGCTATA+TGG 0.341904 8.3:-61961972 MS.gene57525:CDS
TTCTCATTATTATAGTTTAC+CGG 0.343638 8.3:-61961751 MS.gene57525:CDS
AACCTTTAATTTCATAAAGA+TGG 0.347582 8.3:+61962108 None:intergenic
ACTGTTAGAGATTCCTCTTC+CGG 0.377602 8.3:-61961691 MS.gene57525:CDS
TCTTTAATGGGGCTATTCAT+TGG 0.381874 8.3:-61961779 MS.gene57525:CDS
TAACCATGATTCTGTTTCAC+TGG 0.404123 8.3:-61962159 MS.gene57525:CDS
AACCATAATACACAGGACTA+TGG 0.421661 8.3:+61961658 None:intergenic
TAATGGGGCTATTCATTGGT+TGG 0.427301 8.3:-61961775 MS.gene57525:CDS
ACCTCGCTGGCAACCTCAGC+AGG 0.429055 8.3:+61962342 None:intergenic
GTCCTGTGTATTATGGTTTG+TGG 0.436268 8.3:-61961653 MS.gene57525:CDS
GCATGTAATTTGGAACCATA+AGG 0.442244 8.3:+61961996 None:intergenic
AATACAAACTGCAATCATCT+TGG 0.444562 8.3:-61961557 MS.gene57525:CDS
TTCATAAAGATGGTAATGTC+GGG 0.448056 8.3:+61962118 None:intergenic
TAATCCGGCACTTGAAATAT+GGG 0.454488 8.3:-61961589 MS.gene57525:CDS
ATTGGAACTGATGGTGGTAA+TGG 0.460060 8.3:-61961456 MS.gene57525:CDS
TCCTGTGTATTATGGTTTGT+GGG 0.461492 8.3:-61961652 MS.gene57525:CDS
GAGTCTCTGCTTTCACTCCC+TGG 0.464650 8.3:-61961351 MS.gene57525:CDS
CATGTAATTTGGAACCATAA+GGG 0.467753 8.3:+61961997 None:intergenic
TCAAATTCGTTTGTAAGTCA+TGG 0.470890 8.3:-61962307 MS.gene57525:CDS
ATCGCCCATATTTCAAGTGC+CGG 0.478471 8.3:+61961585 None:intergenic
TTTCCTTTCCATTAAATCAA+AGG 0.478785 8.3:+61961713 None:intergenic
TTTCATAAAGATGGTAATGT+CGG 0.482897 8.3:+61962117 None:intergenic
GTCGGGGAAGTAGAAAAGTA+TGG 0.483592 8.3:+61962135 None:intergenic
TTGGTGAAGTATAATAATAA+AGG 0.488795 8.3:-61961432 MS.gene57525:CDS
TGATGACACAGATGGACAAA+AGG 0.498002 8.3:+61961902 None:intergenic
CCGGTCAAGAGATGATTACT+TGG 0.500070 8.3:-61961937 MS.gene57525:CDS
TATTTCTTTGTGAAATCTAG+TGG 0.503633 8.3:+61962028 None:intergenic
GCCAGGACTTATCGTAAAGC+AGG 0.512614 8.3:-61961807 MS.gene57525:CDS
ACATCACTTATTTGAATGCC+AGG 0.517766 8.3:-61961824 MS.gene57525:CDS
AAATTAAAGGTTCATGCAGA+GGG 0.521334 8.3:-61962097 MS.gene57525:CDS
GTATCTCAAAATGAATCTAA+AGG 0.527253 8.3:-61961397 MS.gene57525:CDS
TCTTTGTGAAATCTAGTGGA+TGG 0.529306 8.3:+61962032 None:intergenic
TTGCCTTTGATTTAATGGAA+AGG 0.533360 8.3:-61961716 MS.gene57525:CDS
AATACGTGGAATAAAATTGA+AGG 0.536872 8.3:-61961852 MS.gene57525:CDS
TAAACTACCTCACGATCACC+AGG 0.539411 8.3:+61961333 None:intergenic
TGAAATTAACACAATTCTTG+CGG 0.539680 8.3:+61962232 None:intergenic
GTCAAGAGATGATTACTTGG+TGG 0.541832 8.3:-61961934 MS.gene57525:CDS
GGACTATGGCCAAAATCATC+CGG 0.543478 8.3:+61961672 None:intergenic
GTTGGAGAAACCTCTACGTA+TGG 0.549046 8.3:-61962058 MS.gene57525:CDS
TCCTGCTTTACGATAAGTCC+TGG 0.554004 8.3:+61961806 None:intergenic
TGGCCAAAATCATCCGGAAG+AGG 0.557422 8.3:+61961678 None:intergenic
TCTAAATATGATGACACAGA+TGG 0.560379 8.3:+61961894 None:intergenic
GAAATTAAAGGTTCATGCAG+AGG 0.568478 8.3:-61962098 MS.gene57525:CDS
TCCTGCTGAGGTTGCCAGCG+AGG 0.573172 8.3:-61962343 MS.gene57525:CDS
ATGTAATTTGGAACCATAAG+GGG 0.575504 8.3:+61961998 None:intergenic
GGTGATATTATTGGAACTGA+TGG 0.578976 8.3:-61961465 MS.gene57525:CDS
CCAAGTAATCATCTCTTGAC+CGG 0.585969 8.3:+61961937 None:intergenic
AACTGATGGTGGTAATGGAT+TGG 0.587821 8.3:-61961451 MS.gene57525:CDS
GATATTATTGGAACTGATGG+TGG 0.590443 8.3:-61961462 MS.gene57525:CDS
GAATCTAAAGGCATCTGAAG+TGG 0.593932 8.3:-61961385 MS.gene57525:CDS
GGTCCAGTGAAACAGAATCA+TGG 0.595041 8.3:+61962156 None:intergenic
ATTTGAATGATTAATTCAGA+AGG 0.600517 8.3:+61962365 None:intergenic
AGCAGGATCATTCTTTAATG+GGG 0.603149 8.3:-61961790 MS.gene57525:CDS
AAGCAGAGACTCTTTATACA+TGG 0.605588 8.3:+61961362 None:intergenic
TAATCATTCAAATCCTGCTG+AGG 0.610148 8.3:-61962355 MS.gene57525:CDS
TTGGAACCATAAGGGGACAA+AGG 0.616353 8.3:+61962005 None:intergenic
TTCACTCCCTGGTGATCGTG+AGG 0.617534 8.3:-61961340 MS.gene57525:CDS
AAGGCAACAATAACTTCCAC+CGG 0.621007 8.3:+61961732 None:intergenic
AACCATATAGCTGACATCGA+TGG 0.633533 8.3:+61961970 None:intergenic
AATTAACACAATTCTTGCGG+CGG 0.636044 8.3:+61962235 None:intergenic
AAATGTAAAAGAGACCTCGC+TGG 0.641330 8.3:+61962329 None:intergenic
ACCCACAAACCATAATACAC+AGG 0.646047 8.3:+61961651 None:intergenic
TCATAAAGATGGTAATGTCG+GGG 0.646720 8.3:+61962119 None:intergenic
ATAGAGCGAATTCCATCAAG+AGG 0.648628 8.3:+61962200 None:intergenic
GAGCGAATTCCATCAAGAGG+TGG 0.656789 8.3:+61962203 None:intergenic
TCATTATTATAGTTTACCGG+TGG 0.668923 8.3:-61961748 MS.gene57525:CDS
GCATTCAAATAAGTGATGTG+TGG 0.669083 8.3:+61961828 None:intergenic
TGGATGGATTCCATACGTAG+AGG 0.669122 8.3:+61962048 None:intergenic
TCTCGATGAGAGATAATACG+TGG 0.669859 8.3:-61961866 MS.gene57525:CDS
ACATGCGAATTTGCAAAGTG+AGG 0.671122 8.3:+61962266 None:intergenic
AGTATAATAATAAAGGACAA+CGG 0.711600 8.3:-61961425 MS.gene57525:CDS
AAACTACCTCACGATCACCA+GGG 0.735207 8.3:+61961334 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTATAATAATAAAGGACAA+CGG - chr8.3:61962302-61962321 MS.gene57525:CDS 20.0%
!! ATTTGAATGATTAATTCAGA+AGG + chr8.3:61961365-61961384 None:intergenic 20.0%
!! TACCATCTTTATGAAATTAA+AGG - chr8.3:61961617-61961636 MS.gene57525:CDS 20.0%
!! TTCTCATTATTATAGTTTAC+CGG - chr8.3:61961976-61961995 MS.gene57525:CDS 20.0%
!! TTGGTGAAGTATAATAATAA+AGG - chr8.3:61962295-61962314 MS.gene57525:CDS 20.0%
!!! AACCTTTAATTTCATAAAGA+TGG + chr8.3:61961622-61961641 None:intergenic 20.0%
!!! GAATATGAATTTTCATAATC+CGG - chr8.3:61962123-61962142 MS.gene57525:CDS 20.0%
! AATACGTGGAATAAAATTGA+AGG - chr8.3:61961875-61961894 MS.gene57525:CDS 25.0%
! ACAAAAAGTGGTGATATTAT+TGG - chr8.3:61962253-61962272 MS.gene57525:CDS 25.0%
! GTATCTCAAAATGAATCTAA+AGG - chr8.3:61962330-61962349 MS.gene57525:CDS 25.0%
! TATTTCTTTGTGAAATCTAG+TGG + chr8.3:61961702-61961721 None:intergenic 25.0%
! TGAAATTAACACAATTCTTG+CGG + chr8.3:61961498-61961517 None:intergenic 25.0%
! TTTCCTTTCCATTAAATCAA+AGG + chr8.3:61962017-61962036 None:intergenic 25.0%
!! TATTGTTGCCTTTGATTTAA+TGG - chr8.3:61962006-61962025 MS.gene57525:CDS 25.0%
!! TTTCATAAAGATGGTAATGT+CGG + chr8.3:61961613-61961632 None:intergenic 25.0%
AAAGCAGGATCATTCTTTAA+TGG - chr8.3:61961935-61961954 MS.gene57525:CDS 30.0%
AAATTAAAGGTTCATGCAGA+GGG - chr8.3:61961630-61961649 MS.gene57525:CDS 30.0%
AAGCAGGATCATTCTTTAAT+GGG - chr8.3:61961936-61961955 MS.gene57525:CDS 30.0%
AATACAAACTGCAATCATCT+TGG - chr8.3:61962170-61962189 MS.gene57525:CDS 30.0%
TCAAATTCGTTTGTAAGTCA+TGG - chr8.3:61961420-61961439 MS.gene57525:CDS 30.0%
TCATTATTATAGTTTACCGG+TGG - chr8.3:61961979-61961998 MS.gene57525:CDS 30.0%
TCTAAATATGATGACACAGA+TGG + chr8.3:61961836-61961855 None:intergenic 30.0%
TGAAACAGAATCATGGTTAA+TGG + chr8.3:61961567-61961586 None:intergenic 30.0%
! ATGTAATTTGGAACCATAAG+GGG + chr8.3:61961732-61961751 None:intergenic 30.0%
! CATGTAATTTGGAACCATAA+GGG + chr8.3:61961733-61961752 None:intergenic 30.0%
! TATTATGGTTTGTGGGTATT+TGG - chr8.3:61962082-61962101 MS.gene57525:CDS 30.0%
! TTCATAAAGATGGTAATGTC+GGG + chr8.3:61961612-61961631 None:intergenic 30.0%
! TTGCCTTTGATTTAATGGAA+AGG - chr8.3:61962011-61962030 MS.gene57525:CDS 30.0%
!! CACTTTTTGTAGAGCATATA+GGG + chr8.3:61962243-61962262 None:intergenic 30.0%
!! CTAGGTTTTTCAATGTCAAT+AGG + chr8.3:61962214-61962233 None:intergenic 30.0%
!! GGTTTATATTTTTGCACTGT+TGG - chr8.3:61961651-61961670 MS.gene57525:CDS 30.0%
!!! TATATGGTTTTGGTTATGAC+CGG - chr8.3:61961771-61961790 MS.gene57525:CDS 30.0%
AACCATAATACACAGGACTA+TGG + chr8.3:61962072-61962091 None:intergenic 35.0%
AAGCAGAGACTCTTTATACA+TGG + chr8.3:61962368-61962387 None:intergenic 35.0%
AATTAACACAATTCTTGCGG+CGG + chr8.3:61961495-61961514 None:intergenic 35.0%
ACATCACTTATTTGAATGCC+AGG - chr8.3:61961903-61961922 MS.gene57525:CDS 35.0%
AGCAGGATCATTCTTTAATG+GGG - chr8.3:61961937-61961956 MS.gene57525:CDS 35.0%
ATAATCCGGCACTTGAAATA+TGG - chr8.3:61962137-61962156 MS.gene57525:CDS 35.0%
CCTATATGCTCTACAAAAAG+TGG - chr8.3:61962241-61962260 MS.gene57525:CDS 35.0%
GAAATTAAAGGTTCATGCAG+AGG - chr8.3:61961629-61961648 MS.gene57525:CDS 35.0%
GAGCATATAGGGAAAAATCT+AGG + chr8.3:61962232-61962251 None:intergenic 35.0%
GATATTATTGGAACTGATGG+TGG - chr8.3:61962265-61962284 MS.gene57525:CDS 35.0%
GCATTCAAATAAGTGATGTG+TGG + chr8.3:61961902-61961921 None:intergenic 35.0%
GGTGATATTATTGGAACTGA+TGG - chr8.3:61962262-61962281 MS.gene57525:CDS 35.0%
TAACCATGATTCTGTTTCAC+TGG - chr8.3:61961568-61961587 MS.gene57525:CDS 35.0%
TAATCATTCAAATCCTGCTG+AGG - chr8.3:61961372-61961391 MS.gene57525:CDS 35.0%
TAATCCGGCACTTGAAATAT+GGG - chr8.3:61962138-61962157 MS.gene57525:CDS 35.0%
TCGATGGTATGCATGTAATT+TGG + chr8.3:61961744-61961763 None:intergenic 35.0%
TCTTTAATGGGGCTATTCAT+TGG - chr8.3:61961948-61961967 MS.gene57525:CDS 35.0%
TCTTTGTGAAATCTAGTGGA+TGG + chr8.3:61961698-61961717 None:intergenic 35.0%
TTGGAGAATTTCTCAGTCTA+TGG - chr8.3:61962101-61962120 MS.gene57525:CDS 35.0%
! GCATGTAATTTGGAACCATA+AGG + chr8.3:61961734-61961753 None:intergenic 35.0%
! TCATAAAGATGGTAATGTCG+GGG + chr8.3:61961611-61961630 None:intergenic 35.0%
! TCCTGTGTATTATGGTTTGT+GGG - chr8.3:61962075-61962094 MS.gene57525:CDS 35.0%
!!! CCACTTTTTGTAGAGCATAT+AGG + chr8.3:61962244-61962263 None:intergenic 35.0%
AAATGTAAAAGAGACCTCGC+TGG + chr8.3:61961401-61961420 None:intergenic 40.0%
AACCATATAGCTGACATCGA+TGG + chr8.3:61961760-61961779 None:intergenic 40.0%
AAGGCAACAATAACTTCCAC+CGG + chr8.3:61961998-61962017 None:intergenic 40.0%
ACATGCGAATTTGCAAAGTG+AGG + chr8.3:61961464-61961483 None:intergenic 40.0%
ACCCACAAACCATAATACAC+AGG + chr8.3:61962079-61962098 None:intergenic 40.0%
ACTGTTAGAGATTCCTCTTC+CGG - chr8.3:61962036-61962055 MS.gene57525:CDS 40.0%
ATAGAGCGAATTCCATCAAG+AGG + chr8.3:61961530-61961549 None:intergenic 40.0%
CCAAGTAATCATCTCTTGAC+CGG + chr8.3:61961793-61961812 None:intergenic 40.0%
GAAATACCTTTGTCCCCTTA+TGG - chr8.3:61961716-61961735 MS.gene57525:CDS 40.0%
GTCAAGAGATGATTACTTGG+TGG - chr8.3:61961793-61961812 MS.gene57525:CDS 40.0%
GTCCTGTGTATTATGGTTTG+TGG - chr8.3:61962074-61962093 MS.gene57525:CDS 40.0%
TAATGGGGCTATTCATTGGT+TGG - chr8.3:61961952-61961971 MS.gene57525:CDS 40.0%
TACCATCGATGTCAGCTATA+TGG - chr8.3:61961755-61961774 MS.gene57525:CDS 40.0%
TCTCGATGAGAGATAATACG+TGG - chr8.3:61961861-61961880 MS.gene57525:CDS 40.0%
TGATGACACAGATGGACAAA+AGG + chr8.3:61961828-61961847 None:intergenic 40.0%
! ATTCCTCTTCCGGATGATTT+TGG - chr8.3:61962046-61962065 MS.gene57525:CDS 40.0%
! CGATGTCAGCTATATGGTTT+TGG - chr8.3:61961761-61961780 MS.gene57525:CDS 40.0%
!! AACTGATGGTGGTAATGGAT+TGG - chr8.3:61962276-61962295 MS.gene57525:CDS 40.0%
!! ATTGGAACTGATGGTGGTAA+TGG - chr8.3:61962271-61962290 MS.gene57525:CDS 40.0%
!! GAATCTAAAGGCATCTGAAG+TGG - chr8.3:61962342-61962361 MS.gene57525:CDS 40.0%
AAACTACCTCACGATCACCA+GGG + chr8.3:61962396-61962415 None:intergenic 45.0%
CCGGTCAAGAGATGATTACT+TGG - chr8.3:61961790-61961809 MS.gene57525:CDS 45.0%
GGACTATGGCCAAAATCATC+CGG + chr8.3:61962058-61962077 None:intergenic 45.0%
GGCCATAGTCCTGTGTATTA+TGG - chr8.3:61962067-61962086 MS.gene57525:CDS 45.0%
GGTCCAGTGAAACAGAATCA+TGG + chr8.3:61961574-61961593 None:intergenic 45.0%
GTCGGGGAAGTAGAAAAGTA+TGG + chr8.3:61961595-61961614 None:intergenic 45.0%
GTTGGAGAAACCTCTACGTA+TGG - chr8.3:61961669-61961688 MS.gene57525:CDS 45.0%
TAAACTACCTCACGATCACC+AGG + chr8.3:61962397-61962416 None:intergenic 45.0%
TCAAGAACTCCACCTCTTGA+TGG - chr8.3:61961515-61961534 MS.gene57525:CDS 45.0%
TCCTGCTTTACGATAAGTCC+TGG + chr8.3:61961924-61961943 None:intergenic 45.0%
TTGGAACCATAAGGGGACAA+AGG + chr8.3:61961725-61961744 None:intergenic 45.0%
! ATCGCCCATATTTCAAGTGC+CGG + chr8.3:61962145-61962164 None:intergenic 45.0%
! TGGATGGATTCCATACGTAG+AGG + chr8.3:61961682-61961701 None:intergenic 45.0%
GAGCGAATTCCATCAAGAGG+TGG + chr8.3:61961527-61961546 None:intergenic 50.0%
GCCAGGACTTATCGTAAAGC+AGG - chr8.3:61961920-61961939 MS.gene57525:CDS 50.0%
TGGCCAAAATCATCCGGAAG+AGG + chr8.3:61962052-61962071 None:intergenic 50.0%
GAGTCTCTGCTTTCACTCCC+TGG - chr8.3:61962376-61962395 MS.gene57525:CDS 55.0%
TTCACTCCCTGGTGATCGTG+AGG - chr8.3:61962387-61962406 MS.gene57525:CDS 55.0%
ACCTCGCTGGCAACCTCAGC+AGG + chr8.3:61961388-61961407 None:intergenic 65.0%
TCCTGCTGAGGTTGCCAGCG+AGG - chr8.3:61961384-61961403 MS.gene57525:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 61961332 61962417 61961332 ID=MS.gene57525
chr8.3 mRNA 61961332 61962417 61961332 ID=MS.gene57525.t1;Parent=MS.gene57525
chr8.3 exon 61961332 61962417 61961332 ID=MS.gene57525.t1.exon1;Parent=MS.gene57525.t1
chr8.3 CDS 61961332 61962417 61961332 ID=cds.MS.gene57525.t1;Parent=MS.gene57525.t1
Gene Sequence

>MS.gene57525

ATGGCGAAGATGAACGAGAAGTTATATCTTCCTTCTGAATTAATCATTCAAATCCTGCTGAGGTTGCCAGCGAGGTCTCTTTTACATTTCAAATTCGTTTGTAAGTCATGGTTTTCTCTTATCTCTGATCCTCACTTTGCAAATTCGCATGTTGATGTTTCCGCCGCAAGAATTGTGTTAATTTCAAGAACTCCACCTCTTGATGGAATTCGCTCTATAGATTTTGAAACATCCATTAACCATGATTCTGTTTCACTGGACCATACTTTTCTACTTCCCCGACATTACCATCTTTATGAAATTAAAGGTTCATGCAGAGGGTTTATATTTTTGCACTGTTGGAGAAACCTCTACGTATGGAATCCATCCACTAGATTTCACAAAGAAATACCTTTGTCCCCTTATGGTTCCAAATTACATGCATACCATCGATGTCAGCTATATGGTTTTGGTTATGACCGGTCAAGAGATGATTACTTGGTGGTTTTATTGTCCTTTTGTCCATCTGTGTCATCATATTTAGAGTTTTTCTCGATGAGAGATAATACGTGGAATAAAATTGAAGGTCCACACATCACTTATTTGAATGCCAGGACTTATCGTAAAGCAGGATCATTCTTTAATGGGGCTATTCATTGGTTGGCTTCTCATTATTATAGTTTACCGGTGGAAGTTATTGTTGCCTTTGATTTAATGGAAAGGAAACTGTTAGAGATTCCTCTTCCGGATGATTTTGGCCATAGTCCTGTGTATTATGGTTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGAATATGAATTTTCATAATCCGGCACTTGAAATATGGGCGATGAAAGAATACAAACTGCAATCATCTTGGACTAAAACTCTTGTAATTCCTATTGACATTGAAAAACCTAGATTTTTCCCTATATGCTCTACAAAAAGTGGTGATATTATTGGAACTGATGGTGGTAATGGATTGGTGAAGTATAATAATAAAGGACAACGGTTAGAGTATCTCAAAATGAATCTAAAGGCATCTGAAGTGGCCATGTATAAAGAGTCTCTGCTTTCACTCCCTGGTGATCGTGAGGTAGTTTAA

Protein sequence

>MS.gene57525.t1

MAKMNEKLYLPSELIIQILLRLPARSLLHFKFVCKSWFSLISDPHFANSHVDVSAARIVLISRTPPLDGIRSIDFETSINHDSVSLDHTFLLPRHYHLYEIKGSCRGFIFLHCWRNLYVWNPSTRFHKEIPLSPYGSKLHAYHRCQLYGFGYDRSRDDYLVVLLSFCPSVSSYLEFFSMRDNTWNKIEGPHITYLNARTYRKAGSFFNGAIHWLASHYYSLPVEVIVAFDLMERKLLEIPLPDDFGHSPVYYGLWVFGEFLSLWNMNFHNPALEIWAMKEYKLQSSWTKTLVIPIDIEKPRFFPICSTKSGDIIGTDGGNGLVKYNNKGQRLEYLKMNLKASEVAMYKESLLSLPGDREVV