AlfalfaGEDB | MS.gene87564

M. sativa cultivar XinJiangDaYe / MS.gene87564

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene87564.t1	XP_003605036.1	82	367	33	1	1	334	1	367	1.80E-175	625.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene87564.t1	Q8GXC7	26.9	279	170	8	62	329	164	419	5.5e-16	86.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene87564.t1	G7JVT1	82.0	367	33	1	1	334	1	367	1.3e-175	625.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene87564	MS.gene035238	PPI
MS.gene40887	MS.gene87564	PPI
MS.gene87564	MS.gene064114	PPI
MS.gene87564	MS.gene87584	PPI
MS.gene034688	MS.gene87564	PPI
MS.gene51188	MS.gene87564	PPI
MS.gene060366	MS.gene87564	PPI
MS.gene87564	MS.gene90742	PPI
MS.gene48221	MS.gene87564	PPI
MS.gene87564	MS.gene80610	PPI
MS.gene57529	MS.gene87564	PPI
MS.gene80884	MS.gene87564	PPI
MS.gene87564	MS.gene85454	PPI
MS.gene041395	MS.gene87564	PPI
MS.gene40886	MS.gene87564	PPI
MS.gene40902	MS.gene87564	PPI
MS.gene87564	MS.gene041391	PPI
MS.gene27051	MS.gene87564	PPI
MS.gene060368	MS.gene87564	PPI
MS.gene033875	MS.gene87564	PPI
MS.gene041474	MS.gene87564	PPI
MS.gene77704	MS.gene87564	PPI
MS.gene27020	MS.gene87564	PPI
MS.gene066620	MS.gene87564	PPI
MS.gene035236	MS.gene87564	PPI
MS.gene86273	MS.gene87564	PPI
MS.gene87564	MS.gene87554	PPI
MS.gene041394	MS.gene87564	PPI
MS.gene87564	MS.gene064083	PPI
MS.gene059157	MS.gene87564	PPI
MS.gene51208	MS.gene87564	PPI
MS.gene028390	MS.gene87564	PPI
MS.gene011106	MS.gene87564	PPI
MS.gene87564	MS.gene048193	PPI
MS.gene62398	MS.gene87564	PPI
MS.gene87564	MS.gene58783	PPI
MS.gene60027	MS.gene87564	PPI
MS.gene87564	MS.gene024420	PPI
MS.gene87564	MS.gene016220	PPI
MS.gene87564	MS.gene024008	PPI
MS.gene045475	MS.gene87564	PPI
MS.gene88776	MS.gene87564	PPI
MS.gene87564	MS.gene54541	PPI
MS.gene35068	MS.gene87564	PPI
MS.gene041390	MS.gene87564	PPI
MS.gene90744	MS.gene87564	PPI
MS.gene24286	MS.gene87564	PPI
MS.gene51204	MS.gene87564	PPI
MS.gene58783	MS.gene87564	PPI
MS.gene058693	MS.gene87564	PPI
MS.gene92376	MS.gene87564	PPI
MS.gene000035	MS.gene87564	PPI
MS.gene87564	MS.gene053299	PPI
MS.gene50329	MS.gene87564	PPI
MS.gene070462	MS.gene87564	PPI
MS.gene87564	MS.gene28758	PPI
MS.gene31637	MS.gene87564	PPI
MS.gene87573	MS.gene87564	PPI
MS.gene57537	MS.gene87564	PPI
MS.gene019504	MS.gene87564	PPI
MS.gene034762	MS.gene87564	PPI
MS.gene059156	MS.gene87564	PPI
MS.gene82082	MS.gene87564	PPI
MS.gene033444	MS.gene87564	PPI
MS.gene50306	MS.gene87564	PPI
MS.gene87564	MS.gene58319	PPI
MS.gene26949	MS.gene87564	PPI
MS.gene50309	MS.gene87564	PPI
MS.gene87564	MS.gene033442	PPI
MS.gene87200	MS.gene87564	PPI
MS.gene58311	MS.gene87564	PPI
MS.gene033432	MS.gene87564	PPI
MS.gene87564	MS.gene40878	PPI
MS.gene87564	MS.gene44428	PPI
MS.gene59639	MS.gene87564	PPI
MS.gene031590	MS.gene87564	PPI
MS.gene87564	MS.gene058703	PPI
MS.gene50327	MS.gene87564	PPI
MS.gene066635	MS.gene87564	PPI
MS.gene87564	MS.gene024000	PPI
MS.gene87564	MS.gene012215	PPI
MS.gene010758	MS.gene87564	PPI
MS.gene87586	MS.gene87564	PPI
MS.gene57530	MS.gene87564	PPI
MS.gene066626	MS.gene87564	PPI
MS.gene50326	MS.gene87564	PPI
MS.gene42451	MS.gene87564	PPI
MS.gene51200	MS.gene87564	PPI
MS.gene87564	MS.gene58316	PPI
MS.gene50339	MS.gene87564	PPI
MS.gene046958	MS.gene87564	PPI
MS.gene87564	MS.gene58315	PPI
MS.gene88774	MS.gene87564	PPI
MS.gene87564	MS.gene36595	PPI
MS.gene42452	MS.gene87564	PPI
MS.gene063414	MS.gene87564	PPI
MS.gene87564	MS.gene041473	PPI
MS.gene87564	MS.gene50311	PPI
MS.gene009892	MS.gene87564	PPI
MS.gene87564	MS.gene058989	PPI
MS.gene036662	MS.gene87564	PPI
MS.gene87564	MS.gene57538	PPI
MS.gene87563	MS.gene87564	PPI
MS.gene87564	MS.gene041468	PPI
MS.gene57526	MS.gene87564	PPI
MS.gene87564	MS.gene058693	PPI
MS.gene87564	MS.gene27319	PPI
MS.gene87564	MS.gene041395	PPI
MS.gene021553	MS.gene87564	PPI
MS.gene051820	MS.gene87564	PPI
MS.gene26957	MS.gene87564	PPI
MS.gene97996	MS.gene87564	PPI
MS.gene87564	MS.gene51189	PPI
MS.gene036582	MS.gene87564	PPI
MS.gene27021	MS.gene87564	PPI
MS.gene035235	MS.gene87564	PPI
MS.gene40988	MS.gene87564	PPI
MS.gene58320	MS.gene87564	PPI
MS.gene26101	MS.gene87564	PPI
MS.gene066120	MS.gene87564	PPI
MS.gene27283	MS.gene87564	PPI
MS.gene045140	MS.gene87564	PPI
MS.gene024004	MS.gene87564	PPI
MS.gene58781	MS.gene87564	PPI
MS.gene57717	MS.gene87564	PPI
MS.gene033440	MS.gene87564	PPI
MS.gene44886	MS.gene87564	PPI
MS.gene87562	MS.gene87564	PPI
MS.gene066623	MS.gene87564	PPI
MS.gene87564	MS.gene40988	PPI
MS.gene038756	MS.gene87564	PPI
MS.gene40904	MS.gene87564	PPI
MS.gene87564	MS.gene24173	PPI
MS.gene87564	MS.gene036584	PPI
MS.gene87564	MS.gene42451	PPI
MS.gene041491	MS.gene87564	PPI
MS.gene87564	MS.gene023999	PPI
MS.gene033443	MS.gene87564	PPI
MS.gene51207	MS.gene87564	PPI
MS.gene059096	MS.gene87564	PPI
MS.gene57528	MS.gene87564	PPI
MS.gene87564	MS.gene69307	PPI
MS.gene50297	MS.gene87564	PPI
MS.gene006711	MS.gene87564	PPI
MS.gene87564	MS.gene036581	PPI
MS.gene27285	MS.gene87564	PPI
MS.gene58716	MS.gene87564	PPI
MS.gene68580	MS.gene87564	PPI
MS.gene019505	MS.gene87564	PPI
MS.gene045476	MS.gene87564	PPI
MS.gene58785	MS.gene87564	PPI
MS.gene24208	MS.gene87564	PPI
MS.gene87564	MS.gene000036	PPI
MS.gene50307	MS.gene87564	PPI
MS.gene034690	MS.gene87564	PPI
MS.gene87564	MS.gene50320	PPI
MS.gene044429	MS.gene87564	PPI
MS.gene066639	MS.gene87564	PPI
MS.gene87564	MS.gene58314	PPI
MS.gene87564	MS.gene87557	PPI
MS.gene85454	MS.gene87564	PPI
MS.gene96407	MS.gene87564	PPI
MS.gene87564	MS.gene035263	PPI
MS.gene036760	MS.gene87564	PPI
MS.gene87564	MS.gene67501	PPI
MS.gene87564	MS.gene96406	PPI
MS.gene77857	MS.gene87564	PPI
MS.gene87564	MS.gene51201	PPI
MS.gene57527	MS.gene87564	PPI
MS.gene51191	MS.gene87564	PPI
MS.gene87569	MS.gene87564	PPI
MS.gene87564	MS.gene50336	PPI
MS.gene033426	MS.gene87564	PPI
MS.gene064086	MS.gene87564	PPI
MS.gene50298	MS.gene87564	PPI
MS.gene036584	MS.gene87564	PPI
MS.gene67687	MS.gene87564	PPI
MS.gene035261	MS.gene87564	PPI
MS.gene87564	MS.gene047279	PPI
MS.gene87564	MS.gene50305	PPI
MS.gene87564	MS.gene032969	PPI
MS.gene063670	MS.gene87564	PPI
MS.gene87564	MS.gene68890	PPI
MS.gene71159	MS.gene87564	PPI
MS.gene019506	MS.gene87564	PPI
MS.gene87564	MS.gene42445	PPI
MS.gene77858	MS.gene87564	PPI
MS.gene87564	MS.gene86273	PPI
MS.gene058692	MS.gene87564	PPI
MS.gene87564	MS.gene26830	PPI
MS.gene87564	MS.gene22715	PPI
MS.gene033083	MS.gene87564	PPI
MS.gene69309	MS.gene87564	PPI
MS.gene63658	MS.gene87564	PPI
MS.gene024002	MS.gene87564	PPI
MS.gene033081	MS.gene87564	PPI
MS.gene87564	MS.gene51207	PPI
MS.gene87564	MS.gene63657	PPI
MS.gene87564	MS.gene023996	PPI
MS.gene035262	MS.gene87564	PPI
MS.gene034686	MS.gene87564	PPI
MS.gene40982	MS.gene87564	PPI
MS.gene070461	MS.gene87564	PPI
MS.gene87564	MS.gene061240	PPI
MS.gene87564	MS.gene031590	PPI
MS.gene51199	MS.gene87564	PPI
MS.gene064108	MS.gene87564	PPI
MS.gene58315	MS.gene87564	PPI
MS.gene87564	MS.gene064086	PPI
MS.gene87559	MS.gene87564	PPI
MS.gene87564	MS.gene035234	PPI
MS.gene033431	MS.gene87564	PPI
MS.gene24212	MS.gene87564	PPI
MS.gene87564	MS.gene50332	PPI
MS.gene041475	MS.gene87564	PPI
MS.gene87564	MS.gene42447	PPI
MS.gene87564	MS.gene024979	PPI
MS.gene81242	MS.gene87564	PPI
MS.gene64203	MS.gene87564	PPI
MS.gene87564	MS.gene24826	PPI
MS.gene060367	MS.gene87564	PPI
MS.gene87564	MS.gene044425	PPI
MS.gene87564	MS.gene43790	PPI
MS.gene42444	MS.gene87564	PPI
MS.gene51202	MS.gene87564	PPI
MS.gene059101	MS.gene87564	PPI
MS.gene036664	MS.gene87564	PPI
MS.gene87564	MS.gene59637	PPI
MS.gene064111	MS.gene87564	PPI
MS.gene87564	MS.gene27022	PPI
MS.gene26829	MS.gene87564	PPI
MS.gene064104	MS.gene87564	PPI
MS.gene40878	MS.gene87564	PPI
MS.gene053256	MS.gene87564	PPI
MS.gene75875	MS.gene87564	PPI
MS.gene87564	MS.gene87585	PPI
MS.gene87564	MS.gene024009	PPI
MS.gene87564	MS.gene036599	PPI
MS.gene54049	MS.gene87564	PPI
MS.gene50337	MS.gene87564	PPI
MS.gene43789	MS.gene87564	PPI
MS.gene87564	MS.gene006705	PPI
MS.gene87564	MS.gene061241	PPI
MS.gene50332	MS.gene87564	PPI
MS.gene072177	MS.gene87564	PPI
MS.gene58722	MS.gene87564	PPI
MS.gene87564	MS.gene035237	PPI
MS.gene064091	MS.gene87564	PPI
MS.gene064112	MS.gene87564	PPI
MS.gene061241	MS.gene87564	PPI
MS.gene24213	MS.gene87564	PPI
MS.gene43796	MS.gene87564	PPI
MS.gene87564	MS.gene38220	PPI
MS.gene87564	MS.gene041394	PPI
MS.gene58312	MS.gene87564	PPI
MS.gene36704	MS.gene87564	PPI
MS.gene87564	MS.gene03060	PPI
MS.gene87564	MS.gene036664	PPI
MS.gene87564	MS.gene024011	PPI
MS.gene87564	MS.gene053257	PPI
MS.gene87564	MS.gene58241	PPI
MS.gene87564	MS.gene058696	PPI
MS.gene036556	MS.gene87564	PPI
MS.gene58313	MS.gene87564	PPI
MS.gene87564	MS.gene009893	PPI
MS.gene066622	MS.gene87564	PPI
MS.gene44887	MS.gene87564	PPI
MS.gene85043	MS.gene87564	PPI
MS.gene87564	MS.gene77704	PPI
MS.gene39265	MS.gene87564	PPI
MS.gene63655	MS.gene87564	PPI
MS.gene033430	MS.gene87564	PPI
MS.gene44883	MS.gene87564	PPI
MS.gene036583	MS.gene87564	PPI
MS.gene88780	MS.gene87564	PPI
MS.gene41046	MS.gene87564	PPI
MS.gene063472	MS.gene87564	PPI
MS.gene87588	MS.gene87564	PPI
MS.gene055694	MS.gene87564	PPI
MS.gene017412	MS.gene87564	PPI
MS.gene96448	MS.gene87564	PPI
MS.gene51192	MS.gene87564	PPI
MS.gene87564	MS.gene036663	PPI
MS.gene009883	MS.gene87564	PPI
MS.gene041392	MS.gene87564	PPI
MS.gene58317	MS.gene87564	PPI
MS.gene044563	MS.gene87564	PPI
MS.gene069075	MS.gene87564	PPI
MS.gene033427	MS.gene87564	PPI
MS.gene87564	MS.gene57525	PPI
MS.gene40985	MS.gene87564	PPI
MS.gene87564	MS.gene030114	PPI
MS.gene031591	MS.gene87564	PPI
MS.gene87564	MS.gene045473	PPI
MS.gene87564	MS.gene50301	PPI
MS.gene87564	MS.gene045474	PPI
MS.gene87564	MS.gene036558	PPI
MS.gene58321	MS.gene87564	PPI
MS.gene041388	MS.gene87564	PPI
MS.gene062698	MS.gene87564	PPI
MS.gene57536	MS.gene87564	PPI
MS.gene96126	MS.gene87564	PPI
MS.gene019503	MS.gene87564	PPI
MS.gene87564	MS.gene40984	PPI
MS.gene87564	MS.gene064108	PPI
MS.gene016524	MS.gene87564	PPI
MS.gene50304	MS.gene87564	PPI
MS.gene041473	MS.gene87564	PPI
MS.gene59943	MS.gene87564	PPI
MS.gene31587	MS.gene87564	PPI
MS.gene036557	MS.gene87564	PPI
MS.gene041393	MS.gene87564	PPI
MS.gene033441	MS.gene87564	PPI
MS.gene87564	MS.gene58240	PPI
MS.gene87564	MS.gene27284	PPI
MS.gene063826	MS.gene87564	PPI
MS.gene87564	MS.gene063472	PPI
MS.gene87564	MS.gene034680	PPI
MS.gene84698	MS.gene87564	PPI
MS.gene44892	MS.gene87564	PPI
MS.gene87564	MS.gene48221	PPI
MS.gene87564	MS.gene064109	PPI
MS.gene009891	MS.gene87564	PPI
MS.gene58239	MS.gene87564	PPI
MS.gene066641	MS.gene87564	PPI
MS.gene000038	MS.gene87564	PPI
MS.gene57531	MS.gene87564	PPI
MS.gene87564	MS.gene063474	PPI
MS.gene67501	MS.gene87564	PPI
MS.gene87564	MS.gene51190	PPI
MS.gene87564	MS.gene044426	PPI
MS.gene87564	MS.gene88416	PPI
MS.gene87564	MS.gene034681	PPI
MS.gene39262	MS.gene87564	PPI
MS.gene58241	MS.gene87564	PPI
MS.gene57535	MS.gene87564	PPI
MS.gene025887	MS.gene87564	PPI
MS.gene019507	MS.gene87564	PPI
MS.gene045474	MS.gene87564	PPI
MS.gene87564	MS.gene57532	PPI
MS.gene87564	MS.gene003076	PPI
MS.gene041470	MS.gene87564	PPI
MS.gene058694	MS.gene87564	PPI
MS.gene064090	MS.gene87564	PPI
MS.gene90742	MS.gene87564	PPI
MS.gene058701	MS.gene87564	PPI
MS.gene87564	MS.gene009892	PPI
MS.gene015089	MS.gene87564	PPI
MS.gene006710	MS.gene87564	PPI
MS.gene90743	MS.gene87564	PPI
MS.gene87564	MS.gene058669	PPI
MS.gene87564	MS.gene066120	PPI
MS.gene44885	MS.gene87564	PPI
MS.gene011679	MS.gene87564	PPI
MS.gene060370	MS.gene87564	PPI
MS.gene033079	MS.gene87564	PPI
MS.gene87564	MS.gene041489	PPI
MS.gene64001	MS.gene87564	PPI
MS.gene87564	MS.gene40986	PPI
MS.gene51189	MS.gene87564	PPI
MS.gene57533	MS.gene87564	PPI
MS.gene032970	MS.gene87564	PPI
MS.gene77856	MS.gene87564	PPI
MS.gene24826	MS.gene87564	PPI
MS.gene87564	MS.gene034677	PPI
MS.gene68890	MS.gene87564	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene87564.t1	MTR_4g023120	82.016	367	33	1	1	334	1	367	0.0	612
MS.gene87564.t1	MTR_4g023070	81.199	367	36	1	1	334	1	367	0.0	603
MS.gene87564.t1	MTR_4g023090	59.079	369	107	5	3	332	16	379	3.76e-142	407
MS.gene87564.t1	MTR_4g023080	58.743	366	94	5	3	334	9	351	5.08e-137	393
MS.gene87564.t1	MTR_4g021785	57.493	367	98	5	3	334	9	352	2.02e-135	389
MS.gene87564.t1	MTR_4g023380	58.997	339	78	8	25	334	70	376	6.26e-123	358
MS.gene87564.t1	MTR_4g023130	59.159	333	104	6	3	334	9	310	9.09e-122	353
MS.gene87564.t1	MTR_4g023150	57.556	311	109	5	27	334	67	357	7.36e-112	329
MS.gene87564.t1	MTR_4g023200	57.235	311	110	5	27	334	67	357	1.65e-111	328
MS.gene87564.t1	MTR_4g023190	57.556	311	108	6	27	334	67	356	1.09e-109	323
MS.gene87564.t1	MTR_3g103020	51.330	376	119	11	3	334	20	375	5.07e-107	318
MS.gene87564.t1	MTR_4g023440	49.864	367	94	6	3	334	18	329	8.00e-105	310
MS.gene87564.t1	MTR_4g117720	51.429	350	131	13	1	334	49	375	7.58e-100	299
MS.gene87564.t1	MTR_4g109280	49.728	368	130	9	3	334	8	356	1.50e-98	295
MS.gene87564.t1	MTR_4g094365	48.525	373	130	10	3	333	8	360	1.72e-97	293
MS.gene87564.t1	MTR_3g034160	48.691	382	128	12	3	334	9	372	2.23e-93	283
MS.gene87564.t1	MTR_3g034130	50.137	365	115	12	3	318	9	355	2.65e-93	282
MS.gene87564.t1	MTR_3g034180	48.158	380	133	11	3	334	123	486	5.07e-93	285
MS.gene87564.t1	MTR_4g116330	47.354	378	130	13	3	334	23	377	2.27e-91	278
MS.gene87564.t1	MTR_4g117850	46.684	377	133	13	3	334	23	376	1.39e-89	273
MS.gene87564.t1	MTR_4g117780	45.722	374	143	9	2	334	10	364	1.31e-88	270
MS.gene87564.t1	MTR_4g109270	45.646	379	138	10	1	334	6	361	6.39e-88	268
MS.gene87564.t1	MTR_6g060650	46.597	382	135	12	3	334	8	370	7.74e-87	266
MS.gene87564.t1	MTR_8g433040	45.676	370	135	8	3	333	18	360	1.59e-85	262
MS.gene87564.t1	MTR_8g032380	45.676	370	135	8	3	333	18	360	1.59e-85	262
MS.gene87564.t1	MTR_4g117770	45.845	373	142	9	3	334	11	364	4.85e-85	261
MS.gene87564.t1	MTR_4g117810	45.845	373	142	9	3	334	11	364	4.85e-85	261
MS.gene87564.t1	MTR_4g122850	51.429	315	118	14	31	330	63	357	2.86e-82	254
MS.gene87564.t1	MTR_8g032390	47.851	349	145	11	3	332	40	370	1.42e-80	250
MS.gene87564.t1	MTR_5g097210	45.455	374	138	14	3	333	9	359	9.25e-80	248
MS.gene87564.t1	MTR_4g117870	47.541	305	104	10	34	333	10	263	6.69e-78	239
MS.gene87564.t1	MTR_1g055135	43.767	377	148	12	3	333	13	371	5.81e-77	241
MS.gene87564.t1	MTR_4g118380	46.753	308	120	8	31	312	68	357	8.40e-76	237
MS.gene87564.t1	MTR_5g070080	42.893	394	138	14	3	332	10	380	8.44e-76	238
MS.gene87564.t1	MTR_5g070130	42.133	375	154	10	3	330	11	369	8.84e-76	238
MS.gene87564.t1	MTR_5g070088	40.360	389	162	8	3	334	7	382	3.15e-74	234
MS.gene87564.t1	MTR_4g121580	43.386	378	112	16	3	327	11	339	5.07e-70	223
MS.gene87564.t1	MTR_4g116330	41.799	378	112	13	3	334	23	338	1.44e-69	221
MS.gene87564.t1	MTR_8g433030	42.623	366	106	11	3	332	40	337	1.32e-68	218
MS.gene87564.t1	MTR_1g055195	41.615	322	145	9	27	334	183	475	1.27e-65	214
MS.gene87564.t1	MTR_4g118400	42.090	335	138	11	3	330	8	293	1.29e-64	206
MS.gene87564.t1	MTR_4g117750	42.480	379	148	12	1	333	1	355	3.23e-63	208
MS.gene87564.t1	MTR_4g117750	53.333	120	42	2	217	334	373	480	5.72e-27	110
MS.gene87564.t1	MTR_4g116320	51.948	231	86	6	111	334	43	255	5.29e-61	196
MS.gene87564.t1	MTR_6g463430	55.446	202	69	4	137	334	15	199	2.72e-60	192
MS.gene87564.t1	MTR_7g079370	40.252	318	156	8	31	330	48	349	2.80e-56	187
MS.gene87564.t1	MTR_8g013010	45.149	268	95	9	1	226	52	309	6.80e-56	184
MS.gene87564.t1	MTR_7g079400	41.638	293	137	11	54	332	60	332	1.27e-55	184
MS.gene87564.t1	MTR_4g118370	43.130	262	105	10	80	334	33	257	1.99e-55	181
MS.gene87564.t1	MTR_8g040935	51.208	207	80	5	136	334	12	205	2.69e-55	179
MS.gene87564.t1	MTR_1g055165	36.461	373	129	10	3	334	10	315	1.85e-54	181
MS.gene87564.t1	MTR_4g114700	40.441	272	87	7	68	327	9	217	3.79e-46	157
MS.gene87564.t1	MTR_8g102520	40.684	263	127	10	78	330	72	315	1.53e-45	158
MS.gene87564.t1	MTR_7g117720	52.542	177	61	5	3	158	10	184	1.27e-44	154
MS.gene87564.t1	MTR_7g117720	48.361	122	44	4	215	330	162	270	2.06e-21	92.4
MS.gene87564.t1	MTR_4g116340	45.161	217	86	8	3	191	36	247	2.31e-44	152
MS.gene87564.t1	MTR_4g117530	36.637	333	105	10	3	334	23	250	4.62e-44	152
MS.gene87564.t1	MTR_1g055250	41.250	240	109	9	103	331	46	264	4.21e-42	149
MS.gene87564.t1	MTR_2g048580	34.677	372	155	17	3	330	8	335	1.39e-41	148
MS.gene87564.t1	MTR_1g055175	43.318	217	92	8	130	334	1	198	1.48e-40	141
MS.gene87564.t1	MTR_4g117430	51.656	151	58	6	79	226	14	152	1.71e-38	134
MS.gene87564.t1	MTR_7g079420	34.657	277	122	11	67	329	905	1136	5.54e-33	129
MS.gene87564.t1	MTR_5g023000	55.140	107	34	2	230	334	2	96	3.13e-27	103
MS.gene87564.t1	MTR_4g118360	49.600	125	43	3	214	334	15	123	3.69e-27	103
MS.gene87564.t1	MTR_4g122860	39.394	198	67	9	144	330	158	313	2.21e-26	107
MS.gene87564.t1	MTR_1g097490	27.473	364	205	12	3	329	49	390	1.34e-25	106
MS.gene87564.t1	MTR_4g108820	31.716	268	150	11	3	257	42	289	5.23e-25	103
MS.gene87564.t1	MTR_8g098830	39.326	178	83	8	138	308	35	194	5.79e-25	101
MS.gene87564.t1	MTR_4g023430	46.970	132	39	4	208	334	114	219	8.27e-25	100
MS.gene87564.t1	MTR_1g097560	25.886	367	203	13	3	329	36	373	9.89e-24	100
MS.gene87564.t1	MTR_1g094210	24.784	347	195	11	3	309	57	377	1.33e-23	100
MS.gene87564.t1	MTR_2g028130	26.409	337	175	13	2	272	4	333	2.29e-23	100
MS.gene87564.t1	MTR_7g079450	40.940	149	66	5	185	330	1	130	2.69e-23	94.0
MS.gene87564.t1	MTR_1g094210	25.000	340	189	11	3	302	57	370	7.03e-23	98.6
MS.gene87564.t1	MTR_4g133170	27.848	316	180	11	2	276	3	311	1.47e-22	97.4
MS.gene87564.t1	MTR_1g097330	29.195	298	155	11	3	258	16	299	2.14e-22	97.4
MS.gene87564.t1	MTR_0667s0010	27.829	327	171	13	3	272	6	324	3.41e-22	96.7
MS.gene87564.t1	MTR_6g034720	43.902	123	62	3	86	202	48	169	1.00e-21	92.0
MS.gene87564.t1	MTR_2g055970	27.027	370	207	14	3	329	211	560	1.12e-21	96.3
MS.gene87564.t1	MTR_2g028140	28.198	344	166	16	2	272	4	339	2.51e-21	94.4
MS.gene87564.t1	MTR_2g021050	26.273	373	199	15	2	333	4	341	3.56e-21	93.6
MS.gene87564.t1	MTR_1g068875	26.923	312	181	10	2	272	3	308	2.09e-20	91.3
MS.gene87564.t1	MTR_2g021150	27.090	299	167	11	3	257	14	305	3.71e-20	90.5
MS.gene87564.t1	MTR_2g046920	28.267	329	176	14	3	283	24	340	3.78e-20	90.5
MS.gene87564.t1	MTR_8g467140	27.852	298	165	11	3	259	32	320	4.20e-20	89.7
MS.gene87564.t1	MTR_8g101580	25.946	370	213	13	2	329	44	394	7.00e-20	90.1
MS.gene87564.t1	MTR_1g068835	25.937	347	198	11	2	306	3	332	1.29e-19	89.0
MS.gene87564.t1	MTR_2g426070	27.273	330	174	11	4	272	7	331	1.34e-19	89.4
MS.gene87564.t1	MTR_2g028160	26.100	341	175	14	2	273	4	336	3.39e-19	88.2
MS.gene87564.t1	MTR_4g107820	25.729	377	205	16	2	329	35	385	4.01e-19	87.8
MS.gene87564.t1	MTR_4g107780	25.729	377	205	16	2	329	35	385	4.01e-19	87.8
MS.gene87564.t1	MTR_2g426020	27.077	325	177	11	3	273	6	324	5.66e-19	87.4
MS.gene87564.t1	MTR_4g107780	25.729	377	205	16	2	329	35	385	6.03e-19	87.4
MS.gene87564.t1	MTR_4g107820	25.729	377	205	16	2	329	35	385	6.69e-19	87.4
MS.gene87564.t1	MTR_1g068860	25.634	355	201	14	1	310	2	338	7.00e-19	87.0
MS.gene87564.t1	MTR_2g031640	29.073	313	174	11	3	272	6	313	7.59e-19	87.0
MS.gene87564.t1	MTR_3g036290	28.966	290	144	13	3	252	22	289	9.09e-19	86.3
MS.gene87564.t1	MTR_4g070550	27.302	315	158	13	2	252	4	311	1.03e-18	86.7
MS.gene87564.t1	MTR_2g024100	29.218	243	127	11	65	272	96	328	1.07e-18	86.7
MS.gene87564.t1	MTR_2g021155	28.939	311	170	13	6	273	39	341	1.18e-18	87.4
MS.gene87564.t1	MTR_2g426090	27.329	322	175	12	6	271	9	327	1.19e-18	86.7
MS.gene87564.t1	MTR_2g028110	26.349	315	182	10	2	272	3	311	1.33e-18	86.3
MS.gene87564.t1	MTR_2g047832	25.071	351	181	14	3	290	29	360	2.12e-18	85.9
MS.gene87564.t1	MTR_4g023100	44.643	112	55	2	229	334	6	116	3.42e-18	79.7
MS.gene87564.t1	MTR_3g083010	26.176	340	175	14	3	272	6	339	1.06e-17	84.0
MS.gene87564.t1	MTR_2g031720	27.707	314	181	10	3	272	6	317	2.92e-17	82.4
MS.gene87564.t1	MTR_3g009310	25.201	373	209	13	3	329	42	390	3.33e-17	82.0
MS.gene87564.t1	MTR_3g023930	24.384	365	207	12	3	329	34	367	3.98e-17	81.6
MS.gene87564.t1	MTR_5g057790	28.896	308	160	13	3	266	46	338	5.04e-17	81.6
MS.gene87564.t1	MTR_5g086590	30.348	201	125	8	74	265	9	203	7.12e-17	79.0
MS.gene87564.t1	MTR_2g046900	27.003	337	180	16	3	290	28	347	8.84e-17	80.9
MS.gene87564.t1	MTR_2g046830	26.667	330	182	14	3	290	25	336	1.39e-16	80.5
MS.gene87564.t1	MTR_4g030830	24.011	354	190	11	3	290	9	349	1.79e-16	80.1
MS.gene87564.t1	MTR_3g009300	26.667	345	203	17	6	329	37	352	5.89e-16	78.2
MS.gene87564.t1	MTR_1g097370	25.510	294	163	12	3	290	68	311	6.41e-16	79.0
MS.gene87564.t1	MTR_7g017130	30.047	213	124	11	65	256	124	332	7.98e-16	78.2
MS.gene87564.t1	MTR_1g050542	23.352	364	225	14	3	329	58	404	8.36e-16	78.2
MS.gene87564.t1	MTR_7g017170	30.047	213	124	11	65	256	124	332	9.52e-16	77.8
MS.gene87564.t1	MTR_5g097350	24.427	262	164	8	79	330	146	383	9.94e-16	77.8
MS.gene87564.t1	MTR_3g014540	27.273	374	206	19	3	332	29	380	1.08e-15	77.8
MS.gene87564.t1	MTR_7g070830	27.193	342	162	15	3	263	21	356	1.17e-15	77.8
MS.gene87564.t1	MTR_7g445890	25.939	293	165	11	3	252	16	299	3.35e-15	76.3
MS.gene87564.t1	MTR_8g063440	28.713	202	127	8	69	256	120	318	3.48e-15	76.3
MS.gene87564.t1	MTR_6g021880	26.423	246	161	7	39	271	93	331	4.04e-15	75.9
MS.gene87564.t1	MTR_1g055200	50.617	81	38	2	64	144	5	83	4.15e-15	70.9
MS.gene87564.t1	MTR_7g057270	26.611	357	181	16	3	290	26	370	4.87e-15	75.9
MS.gene87564.t1	MTR_8g013005	62.500	56	19	1	281	334	1	56	8.85e-15	68.6
MS.gene87564.t1	MTR_7g070880	27.492	331	153	15	3	252	21	345	1.47e-14	74.3
MS.gene87564.t1	MTR_2g031680	25.243	309	188	10	3	272	6	310	1.48e-14	74.3
MS.gene87564.t1	MTR_7g060960	29.276	304	156	13	3	270	32	312	1.59e-14	73.9
MS.gene87564.t1	MTR_2g104340	23.645	406	213	13	3	334	14	396	1.64e-14	74.3
MS.gene87564.t1	MTR_5g069120	41.905	105	52	1	31	126	52	156	2.08e-14	70.9
MS.gene87564.t1	MTR_4g117550	25.850	294	143	12	69	334	127	373	2.46e-14	73.6
MS.gene87564.t1	MTR_5g097330	26.370	292	178	9	62	334	130	403	2.73e-14	73.6
MS.gene87564.t1	MTR_3g010920	25.745	369	201	16	3	329	44	381	4.10e-14	72.8
MS.gene87564.t1	MTR_8g012090	25.896	251	133	10	50	289	110	318	4.69e-14	72.4
MS.gene87564.t1	MTR_3g013740	26.299	308	166	14	3	257	44	343	6.06e-14	72.4
MS.gene87564.t1	MTR_7g061060	26.415	318	146	14	3	252	13	310	6.71e-14	72.4
MS.gene87564.t1	MTR_6g079810	26.201	229	131	8	65	256	171	398	7.34e-14	72.4
MS.gene87564.t1	MTR_2g022000	26.282	312	168	14	59	326	114	407	8.80e-14	72.0
MS.gene87564.t1	MTR_6g065980	24.194	372	208	16	3	329	16	358	1.48e-13	71.2
MS.gene87564.t1	MTR_5g011200	25.658	304	163	12	3	257	17	306	1.83e-13	70.9
MS.gene87564.t1	MTR_1g053510	27.083	240	128	10	56	256	110	341	2.63e-13	70.5
MS.gene87564.t1	MTR_3g014570	25.066	379	209	17	3	332	29	381	3.64e-13	70.1
MS.gene87564.t1	MTR_3g013770	25.000	380	213	13	3	332	33	390	4.52e-13	69.7
MS.gene87564.t1	MTR_5g057690	27.687	307	155	13	3	266	46	328	5.98e-13	69.3
MS.gene87564.t1	MTR_0129s0070	24.746	295	171	11	69	334	124	396	6.07e-13	69.7
MS.gene87564.t1	MTR_4g130330	24.917	301	176	12	65	332	106	389	1.19e-12	68.6
MS.gene87564.t1	MTR_3g007360	27.177	379	192	21	6	330	55	403	1.25e-12	68.6
MS.gene87564.t1	MTR_3g006570	24.800	375	215	15	3	329	21	376	1.43e-12	68.2
MS.gene87564.t1	MTR_4g031770	23.569	297	175	10	3	257	4	290	1.47e-12	68.2
MS.gene87564.t1	MTR_7g009265	26.642	274	157	11	53	290	15	280	1.54e-12	67.8
MS.gene87564.t1	MTR_7g017040	25.574	305	177	16	61	334	113	398	1.57e-12	68.2
MS.gene87564.t1	MTR_3g007430	26.441	295	161	13	6	256	46	328	1.81e-12	68.2
MS.gene87564.t1	MTR_2g078870	25.733	307	187	16	36	329	29	307	2.65e-12	67.0
MS.gene87564.t1	MTR_3g011060	25.066	379	210	15	3	328	28	385	2.75e-12	67.4
MS.gene87564.t1	MTR_5g072060	29.688	256	132	14	64	299	109	336	2.91e-12	67.8
MS.gene87564.t1	MTR_3g010390	23.344	317	180	13	3	263	33	342	3.02e-12	67.4
MS.gene87564.t1	MTR_3g464470	24.058	345	190	13	3	290	7	336	3.30e-12	67.0
MS.gene87564.t1	MTR_7g016930	23.810	294	177	11	3	253	16	305	6.38e-12	66.2
MS.gene87564.t1	MTR_0649s0020	25.758	396	206	18	3	329	11	387	6.51e-12	66.2
MS.gene87564.t1	MTR_4g013180	26.705	352	178	14	4	290	12	348	6.85e-12	66.6
MS.gene87564.t1	MTR_2g021800	24.444	315	178	11	59	330	115	412	7.14e-12	66.2
MS.gene87564.t1	MTR_2g021770	27.019	322	182	13	49	334	103	407	7.49e-12	66.2
MS.gene87564.t1	MTR_0054s0100	26.496	234	137	7	53	252	107	339	7.51e-12	66.2
MS.gene87564.t1	MTR_4g028750	27.542	236	125	9	54	252	103	329	8.17e-12	66.2
MS.gene87564.t1	MTR_2g066170	27.957	186	121	5	79	252	133	317	8.83e-12	65.9
MS.gene87564.t1	MTR_4g019990	23.295	352	193	12	3	290	6	344	8.92e-12	65.9
MS.gene87564.t1	MTR_3g007410	26.053	380	195	20	6	330	55	403	1.03e-11	65.9
MS.gene87564.t1	MTR_7g062060	22.359	407	221	16	3	331	12	401	1.07e-11	65.9
MS.gene87564.t1	MTR_8g063370	26.455	189	126	3	73	251	134	319	1.09e-11	65.9
MS.gene87564.t1	MTR_7g069550	29.057	265	135	13	65	299	123	364	1.17e-11	65.5
MS.gene87564.t1	MTR_2g021190	26.978	278	171	13	63	329	116	372	1.33e-11	65.5
MS.gene87564.t1	MTR_6g017305	26.866	201	126	7	69	254	5	199	1.41e-11	64.7
MS.gene87564.t1	MTR_5g037680	24.490	245	150	8	56	290	117	336	1.61e-11	65.5
MS.gene87564.t1	MTR_4g030760	25.369	339	177	15	3	290	73	386	2.16e-11	65.1
MS.gene87564.t1	MTR_3g011100	26.893	383	208	17	3	329	235	601	2.38e-11	65.1
MS.gene87564.t1	MTR_5g069390	24.092	303	185	11	56	334	136	417	2.41e-11	65.1
MS.gene87564.t1	MTR_6g065510	26.452	310	163	15	3	290	23	289	2.87e-11	63.9
MS.gene87564.t1	MTR_7g078900	25.086	291	172	10	62	324	122	394	2.89e-11	64.3
MS.gene87564.t1	MTR_7g013590	25.000	376	214	16	6	332	39	395	2.99e-11	64.3
MS.gene87564.t1	MTR_3g010520	23.948	309	172	12	3	273	25	308	3.15e-11	64.3
MS.gene87564.t1	MTR_4g028680	25.168	298	174	12	65	332	120	398	3.22e-11	64.3
MS.gene87564.t1	MTR_4g028660	23.810	294	179	9	65	330	119	395	3.42e-11	64.3
MS.gene87564.t1	MTR_4g027450	23.810	294	179	9	65	330	119	395	3.42e-11	64.3
MS.gene87564.t1	MTR_7g034310	26.639	244	130	12	106	331	17	229	3.86e-11	62.4
MS.gene87564.t1	MTR_0128s0070	25.693	397	205	20	1	328	20	395	4.38e-11	63.9
MS.gene87564.t1	MTR_1g055065	26.638	229	138	11	49	258	3	220	4.52e-11	63.2
MS.gene87564.t1	MTR_2g066200	26.786	224	130	8	81	289	137	341	4.85e-11	63.5
MS.gene87564.t1	MTR_4g013175	25.564	266	145	7	63	290	121	371	6.90e-11	63.5
MS.gene87564.t1	MTR_1g112010	22.868	258	165	8	52	302	65	295	7.52e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene87564.t1	AT4G12560	27.243	301	178	12	60	333	88	374	3.06e-20	91.3
MS.gene87564.t1	AT4G12560	27.243	301	178	12	60	333	88	374	3.06e-20	91.3
MS.gene87564.t1	AT4G12560	27.243	301	178	12	60	333	88	374	3.06e-20	91.3
MS.gene87564.t1	AT3G06240	26.882	279	170	8	62	329	164	419	1.50e-15	77.4
MS.gene87564.t1	AT3G23880	23.841	302	172	12	2	257	13	302	8.99e-14	72.0
MS.gene87564.t1	AT4G22390	28.326	233	142	11	62	273	90	318	4.75e-13	69.7
MS.gene87564.t1	AT4G22390	28.326	233	142	11	62	273	90	318	5.89e-13	69.7

Find 69 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAAGAATGGATTAACTTTAT+TGG	0.141488	4.1:+75223102	None:intergenic
CATTCTGATTTGTGGGTATT+TGG	0.164291	4.1:-75222830	MS.gene87564:CDS
GAAGCTTATATTAATCTATA+TGG	0.207387	4.1:-75223172	MS.gene87564:CDS
TCAAATTCTGTTGAGGTTAC+AGG	0.238787	4.1:-75223542	MS.gene87564:CDS
TTGGAGAATTTCTCAGTCTA+TGG	0.269491	4.1:-75222811	MS.gene87564:CDS
GGTGATATTATTGGAAAATA+TGG	0.274829	4.1:-75222611	MS.gene87564:CDS
CCTATGTATTCTACAGAAAA+AGG	0.278205	4.1:-75222632	MS.gene87564:CDS
CTTCCTCAGCATGTCATTCC+TGG	0.289129	4.1:-75222704	MS.gene87564:CDS
ATCTCATGAAATTCGATCTA+TGG	0.299311	4.1:-75223386	MS.gene87564:CDS
GTAATGATACAATTGAAATA+TGG	0.328111	4.1:-75222775	MS.gene87564:CDS
TATTGTTGGCTTTGATTTAA+CGG	0.336906	4.1:-75222909	MS.gene87564:CDS
TTCGCGTCGTGATTTAGTTT+TGG	0.338685	4.1:-75222936	MS.gene87564:CDS
GTGAAAGTAGTCCGCAAATC+TGG	0.357133	4.1:+75222655	None:intergenic
GTCATCCAAACATTTACATT+TGG	0.361833	4.1:-75223246	MS.gene87564:CDS
TATATTAATCTATATGGGTT+TGG	0.375018	4.1:-75223166	MS.gene87564:CDS
GAGGGTAATCACTTACCTTA+TGG	0.385311	4.1:-75223016	MS.gene87564:CDS
AGTCTATGGGTTAAGGATAC+TGG	0.398340	4.1:-75222797	MS.gene87564:CDS
AAGCTTATATTAATCTATAT+GGG	0.398707	4.1:-75223171	MS.gene87564:CDS
GGATTCCAAATGTAAATGTT+TGG	0.401055	4.1:+75223241	None:intergenic
TGGTGTTCCTCAATCACATT+TGG	0.406622	4.1:-75223077	MS.gene87564:CDS
ATTTCTCAGTCTATGGGTTA+AGG	0.409114	4.1:-75222804	MS.gene87564:CDS
GCTCTGTGATCAACATCATT+TGG	0.411538	4.1:+75222860	None:intergenic
AAAGTTAATCCATTCTTAGT+TGG	0.417793	4.1:-75223097	MS.gene87564:CDS
ATTAGTACATTCTGATTTGT+GGG	0.419840	4.1:-75222837	MS.gene87564:CDS
CAGTTAAAGTTGGGTGAAGC+AGG	0.434268	4.1:+75223337	None:intergenic
CATTAGTACATTCTGATTTG+TGG	0.439657	4.1:-75222838	MS.gene87564:CDS
ACATGACCCTTTAATTTCAA+AGG	0.452023	4.1:+75223291	None:intergenic
CATGACCCTTTAATTTCAAA+GGG	0.458275	4.1:+75223292	None:intergenic
GAGTCTCTACTTTCACTCTC+TGG	0.466024	4.1:-75222497	MS.gene87564:CDS
TCTCGTTTAGAGACAATACT+TGG	0.472530	4.1:-75223048	MS.gene87564:CDS
TCAAAGGGAAAATAAGAGTC+TGG	0.478722	4.1:+75223307	None:intergenic
TGGAAGGGAACAGTTAAAGT+TGG	0.481061	4.1:+75223327	None:intergenic
TGATCAACATCATTTGGAAC+AGG	0.489346	4.1:+75222866	None:intergenic
TCTCTATAATCGTCGCCATA+AGG	0.490230	4.1:+75223001	None:intergenic
AATACAAAGTGCATTCGTCT+TGG	0.494278	4.1:-75222742	MS.gene87564:CDS
TGGAGAATTTCTCAGTCTAT+GGG	0.497173	4.1:-75222810	MS.gene87564:CDS
TGAGGAACACCAACTAAGAA+TGG	0.498401	4.1:+75223088	None:intergenic
ATATAGATTAATATAAGCTT+CGG	0.502839	4.1:+75223174	None:intergenic
TAATGATACAATTGAAATAT+GGG	0.505203	4.1:-75222774	MS.gene87564:CDS
GGAAGGGAACAGTTAAAGTT+GGG	0.524712	4.1:+75223328	None:intergenic
TACATTTGGAATCCATCCAC+CGG	0.532440	4.1:-75223232	MS.gene87564:CDS
GAAATTAAAGGGTCATGTAG+AGG	0.538383	4.1:-75223286	MS.gene87564:CDS
AAAATATGGTGGTACTAGAT+TGG	0.540379	4.1:-75222597	MS.gene87564:CDS
AGGGAAAATAAGAGTCTGGA+AGG	0.546184	4.1:+75223311	None:intergenic
TGATCATTCAAATTCTGTTG+AGG	0.546882	4.1:-75223549	MS.gene87564:CDS
TCTGTACTATTCCAGATTTG+CGG	0.550677	4.1:-75222666	MS.gene87564:CDS
AAATTAAAGGGTCATGTAGA+GGG	0.550758	4.1:-75223285	MS.gene87564:CDS
ACGATTATAGAGAAGGAGAA+GGG	0.565105	4.1:-75222991	MS.gene87564:CDS
TTATAGAGAAGGAGAAGGGG+TGG	0.585026	4.1:-75222987	MS.gene87564:CDS
TTGGCTTTGATTTAACGGAA+AGG	0.585773	4.1:-75222904	MS.gene87564:CDS
GACGATTATAGAGAAGGAGA+AGG	0.587454	4.1:-75222992	MS.gene87564:CDS
GATATTATTGGAAAATATGG+TGG	0.590332	4.1:-75222608	MS.gene87564:CDS
TTCGGAAGGACTGTTGCAGA+AGG	0.591659	4.1:+75222535	None:intergenic
ATTTGAATGATCAGTTCTTG+AGG	0.594660	4.1:+75223559	None:intergenic
TATGGCGACGATTATAGAGA+AGG	0.601035	4.1:-75222998	MS.gene87564:CDS
TCGGAATTAAAAGCAGACAT+TGG	0.601452	4.1:+75223193	None:intergenic
CTCTGTATACACGACAACTT+CGG	0.602313	4.1:+75222517	None:intergenic
GTCTAGAGATGATTATGTGG+TGG	0.603968	4.1:-75223134	MS.gene87564:CDS
CAAATCTGGAATAGTACAGA+GGG	0.610389	4.1:+75222669	None:intergenic
GCAAATCTGGAATAGTACAG+AGG	0.612314	4.1:+75222668	None:intergenic
CAATACTTGGAAAGAAATCG+AGG	0.619297	4.1:-75223035	MS.gene87564:CDS
CGATTATAGAGAAGGAGAAG+GGG	0.628339	4.1:-75222990	MS.gene87564:CDS
TGACCAGGAATGACATGCTG+AGG	0.635899	4.1:+75222701	None:intergenic
GTATACACGACAACTTCGGA+AGG	0.636945	4.1:+75222521	None:intergenic
TTGGTGAAGTATAATGACAA+AGG	0.639076	4.1:-75222578	MS.gene87564:CDS
AGAGGGTTAAAGTAGTGACC+AGG	0.655673	4.1:+75222686	None:intergenic
GGGAAAATAAGAGTCTGGAA+GGG	0.662237	4.1:+75223312	None:intergenic
AATACTTGGAAAGAAATCGA+GGG	0.666838	4.1:-75223034	MS.gene87564:CDS
TCAGTCTAGAGATGATTATG+TGG	0.684477	4.1:-75223137	MS.gene87564:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAGCTTATATTAATCTATAT+GGG	-	chr4.1:75222884-75222903	MS.gene87564:CDS	15.0%
!!	ATATAGATTAATATAAGCTT+CGG	+	chr4.1:75222884-75222903	None:intergenic	15.0%
!!	TAATGATACAATTGAAATAT+GGG	-	chr4.1:75223281-75223300	MS.gene87564:CDS	15.0%
!!	GAAGCTTATATTAATCTATA+TGG	-	chr4.1:75222883-75222902	MS.gene87564:CDS	20.0%
!!	GTAATGATACAATTGAAATA+TGG	-	chr4.1:75223280-75223299	MS.gene87564:CDS	20.0%
!!	TATATTAATCTATATGGGTT+TGG	-	chr4.1:75222889-75222908	MS.gene87564:CDS	20.0%
!!!	ATTTTCCCTTTGAAATTAAA+GGG	-	chr4.1:75222758-75222777	MS.gene87564:CDS	20.0%
!!!	TAAGAATGGATTAACTTTAT+TGG	+	chr4.1:75222956-75222975	None:intergenic	20.0%
!!!	TATTTTCCCTTTGAAATTAA+AGG	-	chr4.1:75222757-75222776	MS.gene87564:CDS	20.0%
!	AAAGTTAATCCATTCTTAGT+TGG	-	chr4.1:75222958-75222977	MS.gene87564:CDS	25.0%
!	ACAGAAAAAGGTGATATTAT+TGG	-	chr4.1:75223435-75223454	MS.gene87564:intron	25.0%
!	GATATTATTGGAAAATATGG+TGG	-	chr4.1:75223447-75223466	MS.gene87564:intron	25.0%
!	GGTGATATTATTGGAAAATA+TGG	-	chr4.1:75223444-75223463	MS.gene87564:intron	25.0%
!!	ATTAGTACATTCTGATTTGT+GGG	-	chr4.1:75223218-75223237	MS.gene87564:CDS	25.0%
!!	CTTTTTCTGTAGAATACATA+GGG	+	chr4.1:75223425-75223444	None:intergenic	25.0%
!!!	TATTGTTGGCTTTGATTTAA+CGG	-	chr4.1:75223146-75223165	MS.gene87564:CDS	25.0%
!!!	TTAGTTTTGGATGTTATTGT+TGG	-	chr4.1:75223132-75223151	MS.gene87564:CDS	25.0%
	AAAAACTCCAAATGTGATTG+AGG	+	chr4.1:75222988-75223007	None:intergenic	30.0%
	AAAATATGGTGGTACTAGAT+TGG	-	chr4.1:75223458-75223477	MS.gene87564:intron	30.0%
	AAATTAAAGGGTCATGTAGA+GGG	-	chr4.1:75222770-75222789	MS.gene87564:CDS	30.0%
	AATACTTGGAAAGAAATCGA+GGG	-	chr4.1:75223021-75223040	MS.gene87564:CDS	30.0%
	ATCTCATGAAATTCGATCTA+TGG	-	chr4.1:75222669-75222688	MS.gene87564:CDS	30.0%
	ATTTGAATGATCAGTTCTTG+AGG	+	chr4.1:75222499-75222518	None:intergenic	30.0%
	CCTATGTATTCTACAGAAAA+AGG	-	chr4.1:75223423-75223442	MS.gene87564:intron	30.0%
	GGATTCCAAATGTAAATGTT+TGG	+	chr4.1:75222817-75222836	None:intergenic	30.0%
	GTCATCCAAACATTTACATT+TGG	-	chr4.1:75222809-75222828	MS.gene87564:CDS	30.0%
	TCAAATGCGTTTGTAAGTTA+TGG	-	chr4.1:75222554-75222573	MS.gene87564:CDS	30.0%
	TGATCATTCAAATTCTGTTG+AGG	-	chr4.1:75222506-75222525	MS.gene87564:CDS	30.0%
	TTGGTGAAGTATAATGACAA+AGG	-	chr4.1:75223477-75223496	MS.gene87564:intron	30.0%
!	AATGACAAAGGACAGTTTTT+AGG	-	chr4.1:75223489-75223508	MS.gene87564:intron	30.0%
!	ACATGACCCTTTAATTTCAA+AGG	+	chr4.1:75222767-75222786	None:intergenic	30.0%
!	ATGACAAAGGACAGTTTTTA+GGG	-	chr4.1:75223490-75223509	MS.gene87564:intron	30.0%
!	CATGACCCTTTAATTTCAAA+GGG	+	chr4.1:75222766-75222785	None:intergenic	30.0%
!	CATTAGTACATTCTGATTTG+TGG	-	chr4.1:75223217-75223236	MS.gene87564:CDS	30.0%
!	CCTTTTTCTGTAGAATACAT+AGG	+	chr4.1:75223426-75223445	None:intergenic	30.0%
!	TTTTTAATGGGGCTATTCAT+TGG	-	chr4.1:75223091-75223110	MS.gene87564:CDS	30.0%
!!	AAATGTTGATTTGCAAAGTG+AGG	+	chr4.1:75222598-75222617	None:intergenic	30.0%
	AATACAAAGTGCATTCGTCT+TGG	-	chr4.1:75223313-75223332	MS.gene87564:CDS	35.0%
	ACGATTATAGAGAAGGAGAA+GGG	-	chr4.1:75223064-75223083	MS.gene87564:CDS	35.0%
	CAATACTTGGAAAGAAATCG+AGG	-	chr4.1:75223020-75223039	MS.gene87564:CDS	35.0%
	GAAATTAAAGGGTCATGTAG+AGG	-	chr4.1:75222769-75222788	MS.gene87564:CDS	35.0%
	TCAAAGGGAAAATAAGAGTC+TGG	+	chr4.1:75222751-75222770	None:intergenic	35.0%
	TCAAATTCTGTTGAGGTTAC+AGG	-	chr4.1:75222513-75222532	MS.gene87564:CDS	35.0%
	TCAGTCTAGAGATGATTATG+TGG	-	chr4.1:75222918-75222937	MS.gene87564:CDS	35.0%
	TCGGAATTAAAAGCAGACAT+TGG	+	chr4.1:75222865-75222884	None:intergenic	35.0%
	TCTCGTTTAGAGACAATACT+TGG	-	chr4.1:75223007-75223026	MS.gene87564:CDS	35.0%
	TCTGTACTATTCCAGATTTG+CGG	-	chr4.1:75223389-75223408	MS.gene87564:CDS	35.0%
	TGGAGAATTTCTCAGTCTAT+GGG	-	chr4.1:75223245-75223264	MS.gene87564:CDS	35.0%
	TTGGAGAATTTCTCAGTCTA+TGG	-	chr4.1:75223244-75223263	MS.gene87564:CDS	35.0%
!	ATTTCTCAGTCTATGGGTTA+AGG	-	chr4.1:75223251-75223270	MS.gene87564:CDS	35.0%
!	CAAATCTGGAATAGTACAGA+GGG	+	chr4.1:75223389-75223408	None:intergenic	35.0%
!	CATTCTGATTTGTGGGTATT+TGG	-	chr4.1:75223225-75223244	MS.gene87564:CDS	35.0%
!	TGATCAACATCATTTGGAAC+AGG	+	chr4.1:75223192-75223211	None:intergenic	35.0%
!	TGGTATTTGTCTTTTCGATC+CGG	+	chr4.1:75222845-75222864	None:intergenic	35.0%
!!	TTGGCTTTGATTTAACGGAA+AGG	-	chr4.1:75223151-75223170	MS.gene87564:CDS	35.0%
	AGGGAAAATAAGAGTCTGGA+AGG	+	chr4.1:75222747-75222766	None:intergenic	40.0%
	CGATTATAGAGAAGGAGAAG+GGG	-	chr4.1:75223065-75223084	MS.gene87564:CDS	40.0%
	CTCTGTATACACGACAACTT+CGG	+	chr4.1:75223541-75223560	None:intergenic	40.0%
	GACGATTATAGAGAAGGAGA+AGG	-	chr4.1:75223063-75223082	MS.gene87564:CDS	40.0%
	GAGGGTAATCACTTACCTTA+TGG	-	chr4.1:75223039-75223058	MS.gene87564:CDS	40.0%
	GCTCTGTGATCAACATCATT+TGG	+	chr4.1:75223198-75223217	None:intergenic	40.0%
	GGAAGGGAACAGTTAAAGTT+GGG	+	chr4.1:75222730-75222749	None:intergenic	40.0%
	GGGAAAATAAGAGTCTGGAA+GGG	+	chr4.1:75222746-75222765	None:intergenic	40.0%
	GTCTAGAGATGATTATGTGG+TGG	-	chr4.1:75222921-75222940	MS.gene87564:CDS	40.0%
	TATGGCGACGATTATAGAGA+AGG	-	chr4.1:75223057-75223076	MS.gene87564:CDS	40.0%
	TCTCTATAATCGTCGCCATA+AGG	+	chr4.1:75223057-75223076	None:intergenic	40.0%
	TGAGGAACACCAACTAAGAA+TGG	+	chr4.1:75222970-75222989	None:intergenic	40.0%
	TGGAAGGGAACAGTTAAAGT+TGG	+	chr4.1:75222731-75222750	None:intergenic	40.0%
	TGGTGTTCCTCAATCACATT+TGG	-	chr4.1:75222978-75222997	MS.gene87564:CDS	40.0%
!	AGAAGGGGTGGTTTTTAATG+GGG	-	chr4.1:75223080-75223099	MS.gene87564:CDS	40.0%
!	AGTCTATGGGTTAAGGATAC+TGG	-	chr4.1:75223258-75223277	MS.gene87564:CDS	40.0%
!	GAGAAGGGGTGGTTTTTAAT+GGG	-	chr4.1:75223079-75223098	MS.gene87564:CDS	40.0%
!	GCAAATCTGGAATAGTACAG+AGG	+	chr4.1:75223390-75223409	None:intergenic	40.0%
!	TACATTTGGAATCCATCCAC+CGG	-	chr4.1:75222823-75222842	MS.gene87564:CDS	40.0%
!	TATTTGTCTTTTCGATCCGG+TGG	+	chr4.1:75222842-75222861	None:intergenic	40.0%
!!	TTCGCGTCGTGATTTAGTTT+TGG	-	chr4.1:75223119-75223138	MS.gene87564:CDS	40.0%
	AGAGGGTTAAAGTAGTGACC+AGG	+	chr4.1:75223372-75223391	None:intergenic	45.0%
	CAGTTAAAGTTGGGTGAAGC+AGG	+	chr4.1:75222721-75222740	None:intergenic	45.0%
	GAGTCTCTACTTTCACTCTC+TGG	-	chr4.1:75223558-75223577	MS.gene87564:CDS	45.0%
	GTATACACGACAACTTCGGA+AGG	+	chr4.1:75223537-75223556	None:intergenic	45.0%
	GTGAAAGTAGTCCGCAAATC+TGG	+	chr4.1:75223403-75223422	None:intergenic	45.0%
	TTATAGAGAAGGAGAAGGGG+TGG	-	chr4.1:75223068-75223087	MS.gene87564:CDS	45.0%
!	GGAGAAGGGGTGGTTTTTAA+TGG	-	chr4.1:75223078-75223097	MS.gene87564:CDS	45.0%
	CTTCCTCAGCATGTCATTCC+TGG	-	chr4.1:75223351-75223370	MS.gene87564:CDS	50.0%
	TGACCAGGAATGACATGCTG+AGG	+	chr4.1:75223357-75223376	None:intergenic	50.0%
	TTCGGAAGGACTGTTGCAGA+AGG	+	chr4.1:75223523-75223542	None:intergenic	50.0%
!	TGTCTTTTCGATCCGGTGGA+TGG	+	chr4.1:75222838-75222857	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	75222487	75223590	75222487	ID=MS.gene87564
chr4.1	mRNA	75222487	75223590	75222487	ID=MS.gene87564.t1;Parent=MS.gene87564
chr4.1	exon	75223512	75223590	75223512	ID=MS.gene87564.t1.exon1;Parent=MS.gene87564.t1
chr4.1	CDS	75223512	75223590	75223512	ID=cds.MS.gene87564.t1;Parent=MS.gene87564.t1
chr4.1	exon	75222487	75223412	75222487	ID=MS.gene87564.t1.exon2;Parent=MS.gene87564.t1
chr4.1	CDS	75222487	75223412	75222487	ID=cds.MS.gene87564.t1;Parent=MS.gene87564.t1

Gene Sequence

>MS.gene87564

ATGGATCTTCCTCAAGAACTGATCATTCAAATTCTGTTGAGGTTACAGGTGAAGTCTCTTATATTTTTCAAATGCGTTTGTAAGTTATGGTTCTCTCTTATCTCTGATCCTCACTTTGCAAATCAACATTTTCAACTTAACTTTGCAAAACACACTCGTAGATTTTTATGCATTTCAGCTCTATCTCATGAAATTCGATCTATGGATTTTGATGCATTTCTTAACAATGCTCCTGCTTCACCCAACTTTAACTGTTCCCTTCCAGACTCTTATTTTCCCTTTGAAATTAAAGGGTCATGTAGAGGGTTTATATTCTTGTATCGTCATCCAAACATTTACATTTGGAATCCATCCACCGGATCGAAAAGACAAATACCAATGTCTGCTTTTAATTCCGAAGCTTATATTAATCTATATGGGTTTGGTTATGATCAGTCTAGAGATGATTATGTGGTGGTTTTATTGTCCAATAAAGTTAATCCATTCTTAGTTGGTGTTCCTCAATCACATTTGGAGTTTTTCTCGTTTAGAGACAATACTTGGAAAGAAATCGAGGGTAATCACTTACCTTATGGCGACGATTATAGAGAAGGAGAAGGGGTGGTTTTTAATGGGGCTATTCATTGGTTGTCTTCGCGTCGTGATTTAGTTTTGGATGTTATTGTTGGCTTTGATTTAACGGAAAGGAAATTGTTTGAGATGCCTGTTCCAAATGATGTTGATCACAGAGCATTAGTACATTCTGATTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGGTTAAGGATACTGGTAATGATACAATTGAAATATGGGTGATGAAAGAATACAAAGTGCATTCGTCTTGGACTAAAACTCTTGTTCTTCCTCAGCATGTCATTCCTGGTCACTACTTTAACCCTCTGTACTATTCCAGATTTGCGGACTACTTTCACCCTATGTATTCTACAGAAAAAGGTGATATTATTGGAAAATATGGTGGTACTAGATTGGTGAAGTATAATGACAAAGGACAGTTTTTAGGGCATCACTCCTTCTGCAACAGTCCTTCCGAAGTTGTCGTGTATACAGAGTCTCTACTTTCACTCTCTGGTGACAATTAG

Protein sequence

>MS.gene87564.t1

MDLPQELIIQILLRLQVKSLIFFKCVSLSHEIRSMDFDAFLNNAPASPNFNCSLPDSYFPFEIKGSCRGFIFLYRHPNIYIWNPSTGSKRQIPMSAFNSEAYINLYGFGYDQSRDDYVVVLLSNKVNPFLVGVPQSHLEFFSFRDNTWKEIEGNHLPYGDDYREGEGVVFNGAIHWLSSRRDLVLDVIVGFDLTERKLFEMPVPNDVDHRALVHSDLWVFGEFLSLWVKDTGNDTIEIWVMKEYKVHSSWTKTLVLPQHVIPGHYFNPLYYSRFADYFHPMYSTEKGDIIGKYGGTRLVKYNDKGQFLGHHSFCNSPSEVVVYTESLLSLSGDN