AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24213


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24213.t1 MTR_1g023400 84.591 318 28 2 195 491 35 352 0.0 555
MS.gene24213.t1 MTR_1g022200 57.879 330 101 11 195 492 47 370 4.68e-108 326
MS.gene24213.t1 MTR_1g022305 82.051 195 16 1 1 195 1 176 1.58e-106 325
MS.gene24213.t1 MTR_5g069330 62.245 196 71 3 1 195 1 194 1.02e-69 228
MS.gene24213.t1 MTR_5g069330 62.245 196 71 3 1 195 5 198 1.16e-69 228
MS.gene24213.t1 MTR_1g023430 71.533 137 33 2 359 492 40 173 3.87e-61 198
MS.gene24213.t1 MTR_1g009110 41.108 343 148 14 195 492 46 379 9.15e-61 204
MS.gene24213.t1 MTR_6g082080 53.571 196 85 4 1 195 8 198 8.95e-57 195
MS.gene24213.t1 MTR_7g056830 53.061 196 86 4 1 195 8 198 6.57e-56 192
MS.gene24213.t1 MTR_4g080200 42.012 338 132 16 195 491 35 349 2.23e-55 189
MS.gene24213.t1 MTR_1g024125 75.000 112 27 1 364 474 38 149 3.51e-53 176
MS.gene24213.t1 MTR_1g022105 38.127 299 138 9 195 476 53 321 2.61e-50 174
MS.gene24213.t1 MTR_1g037540 39.933 298 131 13 234 491 111 400 2.72e-44 160
MS.gene24213.t1 MTR_8g032230 53.896 154 68 2 1 154 8 158 5.94e-44 153
MS.gene24213.t1 MTR_2g066050 37.629 194 111 5 3 193 53 239 2.86e-31 126
MS.gene24213.t1 MTR_1g009617 49.242 132 65 1 25 154 4 135 5.63e-29 118
MS.gene24213.t1 MTR_4g077370 35.714 196 112 6 3 193 250 436 1.02e-26 112
MS.gene24213.t1 MTR_4g077370 35.885 209 101 8 3 204 2 184 7.05e-24 104
MS.gene24213.t1 MTR_4g079320 31.780 236 144 5 4 226 20 251 6.62e-24 105
MS.gene24213.t1 MTR_3g049990 31.500 200 132 3 3 201 152 347 1.58e-22 101
MS.gene24213.t1 MTR_2g041140 30.698 215 140 5 3 212 141 351 1.38e-21 99.0
MS.gene24213.t1 MTR_2g031570 68.254 63 19 1 3 65 72 133 9.49e-21 89.0
MS.gene24213.t1 MTR_5g092560 28.643 199 127 4 28 214 100 295 1.05e-20 96.3
MS.gene24213.t1 MTR_1g008000 33.333 273 107 13 251 492 41 269 1.10e-19 89.4
MS.gene24213.t1 MTR_4g068990 28.643 199 125 5 29 214 101 295 4.52e-19 90.9
MS.gene24213.t1 MTR_3g467550 29.648 199 125 7 1 192 115 305 5.47e-19 89.7
MS.gene24213.t1 MTR_3g467550 29.648 199 125 7 1 192 115 305 5.74e-19 90.1
MS.gene24213.t1 MTR_3g467550 30.387 181 115 6 19 192 98 274 1.21e-18 89.4
MS.gene24213.t1 MTR_8g027775 30.682 176 109 6 29 194 127 299 1.41e-18 89.0
MS.gene24213.t1 MTR_8g027770 31.073 177 109 6 29 195 226 399 2.01e-18 89.0
MS.gene24213.t1 MTR_7g109720 29.500 200 129 7 1 195 230 422 3.09e-18 88.6
MS.gene24213.t1 MTR_4g112340 33.721 172 107 4 28 195 121 289 4.23e-18 87.8
MS.gene24213.t1 MTR_2g055850 31.980 197 127 5 2 195 90 282 7.93e-18 86.7
MS.gene24213.t1 MTR_4g134170 25.857 321 198 11 1 293 285 593 1.94e-17 85.9
MS.gene24213.t1 MTR_8g027780 31.034 174 107 6 29 192 131 301 7.01e-17 83.2
MS.gene24213.t1 MTR_8g027780 31.034 174 107 6 29 192 131 301 9.75e-17 83.6
MS.gene24213.t1 MTR_8g097000 27.749 191 121 7 28 204 312 499 4.48e-16 81.6
MS.gene24213.t1 MTR_6g005320 24.138 319 204 10 1 293 247 553 4.82e-16 81.3
MS.gene24213.t1 MTR_3g083690 27.778 198 121 6 6 189 150 339 1.09e-14 77.0
MS.gene24213.t1 MTR_2g100230 29.016 193 127 6 1 189 94 280 1.35e-14 76.6
MS.gene24213.t1 MTR_1g054630 29.381 194 122 6 6 189 159 347 1.93e-14 76.3
MS.gene24213.t1 MTR_7g076820 27.692 195 126 7 26 213 172 358 2.37e-14 75.9
MS.gene24213.t1 MTR_4g459350 25.862 232 157 7 3 229 41 262 2.50e-14 73.6
MS.gene24213.t1 MTR_4g114120 27.638 199 118 7 14 194 154 344 3.54e-14 75.5
MS.gene24213.t1 MTR_2g007000 26.154 195 133 6 1 189 502 691 1.62e-13 73.9
MS.gene24213.t1 MTR_4g059460 25.112 223 158 5 3 220 44 262 4.56e-13 72.0
MS.gene24213.t1 MTR_7g057250 29.268 205 109 8 3 180 163 358 5.79e-13 72.0
MS.gene24213.t1 MTR_0915s0010 25.907 193 132 5 26 213 11 197 7.42e-13 69.3
MS.gene24213.t1 MTR_5g027840 26.531 196 129 6 1 189 102 289 1.23e-12 70.5
MS.gene24213.t1 MTR_2g043360 26.203 187 130 4 3 184 41 224 1.50e-12 70.5
MS.gene24213.t1 MTR_3g449250 28.436 211 132 10 7 211 94 291 2.67e-12 69.3
MS.gene24213.t1 MTR_3g449250 28.436 211 132 10 7 211 94 291 2.75e-12 69.3
MS.gene24213.t1 MTR_6g005550 24.715 263 182 8 3 260 165 416 1.58e-11 67.4
MS.gene24213.t1 MTR_2g032630 27.933 179 121 5 13 189 507 679 3.66e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24213.t1 AT5G60990 46.829 205 95 5 1 195 8 208 3.25e-50 178
MS.gene24213.t1 AT1G16280 34.848 198 111 7 3 193 59 245 6.66e-27 114
MS.gene24213.t1 AT4G16630 30.374 214 141 4 3 212 168 377 1.59e-21 98.6
MS.gene24213.t1 AT1G77030 32.787 183 120 2 19 201 44 223 3.47e-21 97.8
MS.gene24213.t1 AT5G08620 30.508 177 110 6 29 195 106 279 6.32e-20 93.2
MS.gene24213.t1 AT5G63630 31.073 177 109 6 29 195 80 253 9.03e-20 92.8
MS.gene24213.t1 AT5G63630 31.073 177 109 6 29 195 274 447 1.65e-19 92.4
MS.gene24213.t1 AT3G18600 32.143 196 125 5 3 195 90 280 1.66e-19 92.0
MS.gene24213.t1 AT5G54910 31.285 179 118 3 19 195 87 262 4.51e-19 90.9
MS.gene24213.t1 AT5G08610 29.944 177 111 6 29 195 408 581 7.09e-19 90.5
MS.gene24213.t1 AT2G47330 29.082 196 129 6 1 192 227 416 1.08e-18 89.7
MS.gene24213.t1 AT2G40700 30.556 180 120 3 3 177 31 210 7.88e-17 84.0
MS.gene24213.t1 AT5G65900 29.082 196 133 4 2 195 154 345 7.33e-16 80.9
MS.gene24213.t1 AT5G63120 27.979 193 129 6 1 189 164 350 2.76e-15 78.6
MS.gene24213.t1 AT5G63120 27.979 193 129 6 1 189 164 350 2.76e-15 78.6
MS.gene24213.t1 AT5G63120 27.979 193 129 6 1 189 164 350 2.76e-15 78.6
MS.gene24213.t1 AT5G63120 27.979 193 129 6 1 189 164 350 3.50e-15 78.2
MS.gene24213.t1 AT5G63120 27.979 193 129 6 1 189 164 350 3.92e-15 78.6
MS.gene24213.t1 AT2G33730 27.315 216 127 7 1 192 312 521 4.61e-15 78.6
MS.gene24213.t1 AT3G61240 28.205 195 127 5 26 214 147 334 6.12e-15 77.4
MS.gene24213.t1 AT3G61240 28.205 195 127 5 26 214 147 334 6.12e-15 77.4
MS.gene24213.t1 AT4G00660 26.829 164 114 3 26 189 154 311 6.78e-14 74.3
MS.gene24213.t1 AT4G00660 26.829 164 114 3 26 189 154 311 6.78e-14 74.3
MS.gene24213.t1 AT1G55150 26.943 193 131 6 1 189 98 284 1.35e-13 73.6
MS.gene24213.t1 AT1G55150 26.943 193 131 6 1 189 123 309 1.80e-13 73.2
MS.gene24213.t1 AT3G09620 26.203 187 129 5 8 189 403 585 2.96e-13 72.8
MS.gene24213.t1 AT3G09620 26.203 187 129 5 8 189 402 584 3.04e-13 72.8
MS.gene24213.t1 AT1G20920 24.000 200 143 5 8 202 197 392 3.62e-13 72.4
MS.gene24213.t1 AT1G28180 28.426 197 127 6 34 224 4 192 6.30e-13 70.5
MS.gene24213.t1 AT2G42520 26.904 197 123 6 6 189 165 353 7.40e-13 71.2
MS.gene24213.t1 AT2G42520 26.904 197 123 6 6 189 165 353 7.40e-13 71.2
MS.gene24213.t1 AT2G42520 26.904 197 123 6 6 189 165 353 7.40e-13 71.2
MS.gene24213.t1 AT1G71370 28.070 171 114 5 29 193 42 209 1.09e-12 70.9
MS.gene24213.t1 AT1G20920 25.134 187 131 5 8 189 535 717 1.59e-12 70.9
MS.gene24213.t1 AT1G20920 25.134 187 131 5 8 189 535 717 1.59e-12 70.9
MS.gene24213.t1 AT1G20920 25.134 187 131 5 8 189 535 717 1.59e-12 70.9
MS.gene24213.t1 AT1G20920 25.134 187 131 5 8 189 535 717 1.59e-12 70.9
MS.gene24213.t1 AT1G20920 25.134 187 131 5 8 189 535 717 1.59e-12 70.9
MS.gene24213.t1 AT1G20920 25.134 187 131 5 8 189 535 717 1.59e-12 70.9
MS.gene24213.t1 AT3G16840 28.877 187 99 6 20 180 207 385 5.27e-12 68.9
MS.gene24213.t1 AT3G16840 28.877 187 99 6 20 180 208 386 5.32e-12 68.9
MS.gene24213.t1 AT3G09720 32.051 156 91 6 20 169 158 304 3.86e-11 65.9
MS.gene24213.t1 AT3G09720 32.051 156 91 6 20 169 158 304 3.86e-11 65.9

Find 116 sgRNAs with CRISPR-Local

Find 226 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATGCTGGGGTGTCTTTC+AGG 0.172885 1.2:-1600177 None:intergenic
CTCCCGTCATCTTGAGCATT+TGG 0.258740 1.2:+1602075 MS.gene24213:CDS
ATGAAATCATTTACGGATCT+TGG 0.262908 1.2:+1599392 MS.gene24213:CDS
AATCAACATCAATTTGAAAT+TGG 0.285324 1.2:-1602253 None:intergenic
GCCCTCTGAGTTGGTGAAAC+TGG 0.301844 1.2:-1601959 None:intergenic
TTTAACAGAGCCTGGAAAAT+AGG 0.317351 1.2:-1599653 None:intergenic
TGGTGTGTGGTCTTAGTAAA+AGG 0.318775 1.2:-1601822 None:intergenic
AACAAAAGCTCCGGTCTTAC+CGG 0.327768 1.2:-1599627 None:intergenic
CTCTTCAAGGTTGTGACTCC+TGG 0.337187 1.2:+1600139 MS.gene24213:intron
AGAAGAAATGAAATCATTTA+CGG 0.345303 1.2:+1599385 None:intergenic
TAATTCCATCATAACTAGTA+TGG 0.350426 1.2:-1601737 None:intergenic
ATAAATGTTGTCCGGTTACT+AGG 0.358901 1.2:-1600935 None:intergenic
ATAGAATATTTGCAACAAAA+TGG 0.364437 1.2:-1601917 None:intergenic
GCCATTTCTCCACCACGTTC+CGG 0.371024 1.2:+1599608 MS.gene24213:CDS
TCCCGTCATCTTGAGCATTT+GGG 0.381975 1.2:+1602076 MS.gene24213:CDS
TTGTTAACAGCGTTTATCAT+TGG 0.387639 1.2:+1601868 MS.gene24213:CDS
TAGGAAAGATTCCTAGTAAC+CGG 0.390770 1.2:+1600924 MS.gene24213:CDS
GACAGCAACTCATGCATGTA+TGG 0.397679 1.2:+1601666 MS.gene24213:CDS
TCTTGGCTTATCTCTTCAAT+TGG 0.399029 1.2:+1599409 MS.gene24213:CDS
ATAACTTAAGTACCAACTCT+TGG 0.401560 1.2:+1601778 MS.gene24213:CDS
TGAAGTTGCTGGCTACTTTG+AGG 0.403585 1.2:+1599839 MS.gene24213:CDS
GACAATTGTTGTTGGAAAAG+AGG 0.406262 1.2:-1601493 None:intergenic
AACTCATGCATGTATGGTTT+CGG 0.406814 1.2:+1601672 MS.gene24213:CDS
AAAAGTGCGACAATTGTTGT+TGG 0.410531 1.2:-1601501 None:intergenic
GAGGGATTTGATGTGTATTA+CGG 0.412566 1.2:-1601474 None:intergenic
CCTTCGTAAATTAAAATACC+TGG 0.430217 1.2:+1600201 MS.gene24213:CDS
CATCTTGAGCATTTGGGTGA+TGG 0.434538 1.2:+1602082 MS.gene24213:CDS
ACCGGAACGTGGTGGAGAAA+TGG 0.439289 1.2:-1599609 None:intergenic
CATAGATGAGGCACACCTGC+TGG 0.454053 1.2:+1600859 MS.gene24213:CDS
AACTTTGAAGTTGATGTTGT+TGG 0.457396 1.2:-1601706 None:intergenic
ACTTGTGCTTGAATCTTTCG+CGG 0.469466 1.2:-1599467 None:intergenic
ATGATTATCGCAACTTTGCA+TGG 0.470664 1.2:+1601994 MS.gene24213:CDS
AAACTCCATACTAGTTATGA+TGG 0.471735 1.2:+1601732 MS.gene24213:CDS
AAAGGAAGAGGATGTTCAGT+TGG 0.476611 1.2:-1601804 None:intergenic
GTCCGGCATTTAACAGAGCC+TGG 0.479888 1.2:-1599661 None:intergenic
CAAATCCTTGGAGGAAAGGT+TGG 0.481459 1.2:+1602188 MS.gene24213:CDS
ACTTTGAAGTTGATGTTGTT+GGG 0.482647 1.2:-1601705 None:intergenic
AAGGAAGAGGATGTTCAGTT+GGG 0.484768 1.2:-1601803 None:intergenic
ATTTACGAAGGGAAAATGCT+GGG 0.485299 1.2:-1600189 None:intergenic
TTCCAGGCTCTGTTAAATGC+CGG 0.485825 1.2:+1599659 MS.gene24213:CDS
ACAATTGTTGTTGGAAAAGA+GGG 0.492059 1.2:-1601492 None:intergenic
GAATCATACGGTAGTTGTAA+TGG 0.492284 1.2:+1601533 MS.gene24213:CDS
GAGATCACACAAGCAAAGAA+TGG 0.492630 1.2:-1599695 None:intergenic
ACAAGAGTGCTATATCTAGA+AGG 0.495385 1.2:-1601849 None:intergenic
AAGGCAGACTCGGAGGAACT+TGG 0.498515 1.2:-1601643 None:intergenic
CTTGTGTGATCTCTTCCTCA+AGG 0.503237 1.2:+1599705 MS.gene24213:CDS
TGTTTCGTATGTGTGGCCTT+TGG 0.504996 1.2:+1602153 MS.gene24213:CDS
ACACTACTTACAATGATATG+AGG 0.506861 1.2:-1600054 None:intergenic
GTTGATGTTGTTGGGATCAT+CGG 0.508372 1.2:-1601697 None:intergenic
AATTTACGAAGGGAAAATGC+TGG 0.511095 1.2:-1600190 None:intergenic
ACCCAAATGCTCAAGATGAC+GGG 0.515580 1.2:-1602077 None:intergenic
AGAACCCCACCTTTATGAAA+AGG 0.517821 1.2:+1601369 MS.gene24213:intron
AAGAATGGCGATCAAATCCT+TGG 0.518473 1.2:+1602176 MS.gene24213:CDS
GTTCTCCAACCTTTCCTCCA+AGG 0.525401 1.2:-1602193 None:intergenic
ATGTGTGGCCTTTGGAAGAA+TGG 0.525913 1.2:+1602161 MS.gene24213:CDS
GCTGGCTACTTTGAGGCCCT+AGG 0.529090 1.2:+1599846 MS.gene24213:CDS
GTTGACAAGGGAGCTATGCT+TGG 0.530092 1.2:-1602299 None:intergenic
AGCAAGGGAACCTTTGATCT+CGG 0.535996 1.2:-1602027 None:intergenic
TTCAGTTGGGGTCCAAGAGT+TGG 0.536792 1.2:-1601790 None:intergenic
CGATCAAATCCTTGGAGGAA+AGG 0.537340 1.2:+1602184 MS.gene24213:CDS
TGATTATCGCAACTTTGCAT+GGG 0.537469 1.2:+1601995 MS.gene24213:CDS
ACATGAGAGAAGAGTTACAT+AGG 0.538503 1.2:-1601447 None:intergenic
TTTGATCGCCATTCTTCCAA+AGG 0.545314 1.2:-1602169 None:intergenic
GAGGCCCTAGGTCAACACTT+TGG 0.545712 1.2:+1599858 MS.gene24213:CDS
CCACCACGTTCCGGTAAGAC+CGG 0.555243 1.2:+1599617 MS.gene24213:CDS
CACCCAAATGCTCAAGATGA+CGG 0.555873 1.2:-1602078 None:intergenic
CCTAGCTATCTAGGTTGACA+AGG 0.556438 1.2:-1602312 None:intergenic
CAACCAACCTTCTAAAGCAA+GGG 0.557016 1.2:-1599495 None:intergenic
CTCACATCATATGACTATCA+AGG 0.557926 1.2:+1602218 MS.gene24213:CDS
CATGAGAGAAGAGTTACATA+GGG 0.558900 1.2:-1601446 None:intergenic
GATTGTGTTGCCGAGATCAA+AGG 0.560123 1.2:+1602017 MS.gene24213:CDS
GCAGACTCGGAGGAACTTGG+TGG 0.561638 1.2:-1601640 None:intergenic
ACATGCATGAGTTGCTGTCA+AGG 0.562381 1.2:-1601662 None:intergenic
TTTATAAGAATGGAATCATA+CGG 0.562387 1.2:+1601521 MS.gene24213:CDS
TACAATGCACAACATAAGCA+AGG 0.562474 1.2:-1602043 None:intergenic
GTGGTCTTAGTAAAAGGAAG+AGG 0.563530 1.2:-1601816 None:intergenic
GCTTATAATTCGATTCCAGC+AGG 0.564883 1.2:-1600874 None:intergenic
AGTTGCTGTCAAGGCAGACT+CGG 0.579329 1.2:-1601653 None:intergenic
AATAGGAAGAACAAAAGCTC+CGG 0.582261 1.2:-1599636 None:intergenic
CGATAATCATATGAGAAGGT+TGG 0.582312 1.2:-1601981 None:intergenic
TGCTATATCTAGAAGGACAT+TGG 0.583334 1.2:-1601842 None:intergenic
GACTCCAAAGTGTTGACCTA+GGG 0.585429 1.2:-1599862 None:intergenic
GGTTTGAAATTCCATGTCGG+AGG 0.588327 1.2:-1600013 None:intergenic
TGGATTATAAGCAGTTCGTA+CGG 0.589478 1.2:+1601888 MS.gene24213:CDS
GCTTGTTGCAACCTCCGACA+TGG 0.590288 1.2:+1600002 MS.gene24213:intron
AGAAGGTTGGCCCTCTGAGT+TGG 0.594377 1.2:-1601968 None:intergenic
AATGGCGATCAAATCCTTGG+AGG 0.596817 1.2:+1602179 MS.gene24213:CDS
CCAACCAACCTTCTAAAGCA+AGG 0.598253 1.2:-1599496 None:intergenic
ACCAGTTTCACCAACTCAGA+GGG 0.601175 1.2:+1601958 MS.gene24213:CDS
TACGAAACATTGACACAAGT+GGG 0.601347 1.2:-1602139 None:intergenic
AGGTTGCTGTAAAATCTCGT+TGG 0.606209 1.2:-1600034 None:intergenic
GTTGCGATAATCATATGAGA+AGG 0.609576 1.2:-1601985 None:intergenic
TGACTCCAAAGTGTTGACCT+AGG 0.612583 1.2:-1599863 None:intergenic
GTGTCAATGTTTCGTATGTG+TGG 0.615188 1.2:+1602146 MS.gene24213:CDS
ATACGAAACATTGACACAAG+TGG 0.622567 1.2:-1602140 None:intergenic
AACCAACCTTCTAAAGCAAG+GGG 0.627015 1.2:-1599494 None:intergenic
TCATGAAGGATCATGAGACT+AGG 0.631962 1.2:-1601416 None:intergenic
GTTGGTTTGAAATTCCATGT+CGG 0.632860 1.2:-1600016 None:intergenic
TTCAGATTCAATGACAGACA+AGG 0.635201 1.2:+1600961 MS.gene24213:CDS
ACAATGCACAACATAAGCAA+GGG 0.637347 1.2:-1602042 None:intergenic
TTTACGAAGGGAAAATGCTG+GGG 0.640268 1.2:-1600188 None:intergenic
TGCTGTCAAGGCAGACTCGG+AGG 0.652883 1.2:-1601650 None:intergenic
ACCCCACCTTTATGAAAAGG+AGG 0.658364 1.2:+1601372 MS.gene24213:CDS
CTTGGACCAGGTCATAGATG+AGG 0.670754 1.2:+1600847 MS.gene24213:intron
AACCAGTTTCACCAACTCAG+AGG 0.670970 1.2:+1601957 MS.gene24213:CDS
GGGTGATGGATCAAAGTGGA+TGG 0.671155 1.2:+1602096 MS.gene24213:CDS
TGATGGAATTATGAGATCAG+CGG 0.673695 1.2:+1601749 MS.gene24213:CDS
AGGAAGAGGATGTTCAGTTG+GGG 0.674344 1.2:-1601802 None:intergenic
GCTCCGGTCTTACCGGAACG+TGG 0.675060 1.2:-1599620 None:intergenic
CTAGCTATCTAGGTTGACAA+GGG 0.678773 1.2:-1602311 None:intergenic
CCGGTCTTACCGGAACGTGG+TGG 0.680280 1.2:-1599617 None:intergenic
TGATAGTCATATGATGTGAG+CGG 0.691442 1.2:-1602215 None:intergenic
GTTGGTGAAACTGGTTGTTG+CGG 0.693105 1.2:-1601950 None:intergenic
TCTAGAAGGACATTGGTGTG+TGG 0.699232 1.2:-1601835 None:intergenic
ATTTGGGTGATGGATCAAAG+TGG 0.755177 1.2:+1602092 MS.gene24213:CDS
ACCAACCTTCTAAAGCAAGG+GGG 0.770547 1.2:-1599493 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTAAGATATAACATC+TGG - chr1.2:1601047-1601066 None:intergenic 15.0%
!! CTCAAAAGATATAAATAAAA+AGG - chr1.2:1601078-1601097 None:intergenic 15.0%
!! TAATAAAGATTACTATTGAA+AGG - chr1.2:1600523-1600542 None:intergenic 15.0%
!! AAATTTCAACAATTTACTCT+TGG + chr1.2:1600465-1600484 MS.gene24213:intron 20.0%
!! AACGTAAAATATATGAAACA+AGG - chr1.2:1600802-1600821 None:intergenic 20.0%
!! AAGAGTAAATTGTTGAAATT+TGG - chr1.2:1600466-1600485 None:intergenic 20.0%
!! AATATGAATTCAATTTCTAC+AGG + chr1.2:1599572-1599591 MS.gene24213:intron 20.0%
!! AGAGTAAATTGTTGAAATTT+GGG - chr1.2:1600465-1600484 None:intergenic 20.0%
!! ATAGAATATTTGCAACAAAA+TGG - chr1.2:1601920-1601939 None:intergenic 20.0%
!! TTTATAAGAATGGAATCATA+CGG + chr1.2:1601521-1601540 MS.gene24213:CDS 20.0%
!!! AAACAACTTGAGTTTATTTT+AGG + chr1.2:1600905-1600924 MS.gene24213:CDS 20.0%
!!! AATCAACATCAATTTGAAAT+TGG - chr1.2:1602256-1602275 None:intergenic 20.0%
! AGAGTAAGAAATCAATTAGA+AGG - chr1.2:1600123-1600142 None:intergenic 25.0%
! ATATATGAAACAAGGACATA+TGG - chr1.2:1600794-1600813 None:intergenic 25.0%
! ATATCAGAGAAGATGAATTT+AGG + chr1.2:1601254-1601273 MS.gene24213:intron 25.0%
! CCAATATAAATGATTGTAGA+GGG - chr1.2:1600338-1600357 None:intergenic 25.0%
! CCTCTACAATCATTTATATT+GGG + chr1.2:1600336-1600355 MS.gene24213:intron 25.0%
! CTGAAAAAATAAATGTTGTC+CGG - chr1.2:1600946-1600965 None:intergenic 25.0%
! CTTGATAAGAGTTTATATAG+AGG + chr1.2:1600393-1600412 MS.gene24213:intron 25.0%
! GAGTAAATTGTTGAAATTTG+GGG - chr1.2:1600464-1600483 None:intergenic 25.0%
! TAACTGCATGTTTCAATAAT+TGG - chr1.2:1600646-1600665 None:intergenic 25.0%
! TAATTCCATCATAACTAGTA+TGG - chr1.2:1601740-1601759 None:intergenic 25.0%
! TTGAAAAATTGAGCTTAGAA+GGG + chr1.2:1601231-1601250 MS.gene24213:intron 25.0%
! TTTGTGAAAAACAACTCAAT+TGG + chr1.2:1599438-1599457 MS.gene24213:CDS 25.0%
!! AATTGATTTCTTACTCTTCA+AGG + chr1.2:1600126-1600145 MS.gene24213:intron 25.0%
!! AGATTTAGAGACTGAAATTT+TGG + chr1.2:1601280-1601299 MS.gene24213:intron 25.0%
!! CATTTTGTAAAGTTAGAAAC+AGG - chr1.2:1600740-1600759 None:intergenic 25.0%
!!! AAGCTCAATTTTTCAACTTT+TGG - chr1.2:1601227-1601246 None:intergenic 25.0%
!!! AGCTCAATTTTTCAACTTTT+GGG - chr1.2:1601226-1601245 None:intergenic 25.0%
!!! CAATATTTTTAGAACTCTCA+AGG + chr1.2:1600546-1600565 MS.gene24213:intron 25.0%
!!! CAGGTATTTTAATTTACGAA+GGG - chr1.2:1600203-1600222 None:intergenic 25.0%
AAACGCATCAATGAATTTAG+AGG - chr1.2:1601314-1601333 None:intergenic 30.0%
AAACTCCATACTAGTTATGA+TGG + chr1.2:1601732-1601751 MS.gene24213:CDS 30.0%
AAGAAATCAATTAGAAGGAG+TGG - chr1.2:1600118-1600137 None:intergenic 30.0%
ACACTACTTACAATGATATG+AGG - chr1.2:1600057-1600076 None:intergenic 30.0%
ACAGATGAATAATTCATACC+AGG - chr1.2:1600222-1600241 None:intergenic 30.0%
ATAACATCTGGTTAAAGCTA+AGG - chr1.2:1601035-1601054 None:intergenic 30.0%
ATAACTTAAGTACCAACTCT+TGG + chr1.2:1601778-1601797 MS.gene24213:CDS 30.0%
ATATCAAAGAAACTTTGCAG+TGG + chr1.2:1600671-1600690 MS.gene24213:intron 30.0%
ATGAAATCATTTACGGATCT+TGG + chr1.2:1599392-1599411 MS.gene24213:CDS 30.0%
ATGTAGTCCAACTTATGAAT+TGG + chr1.2:1600586-1600605 MS.gene24213:intron 30.0%
CAGAAAGTAACCTACAAATT+AGG - chr1.2:1601160-1601179 None:intergenic 30.0%
CATGTTTCAATAATTGGTGT+GGG - chr1.2:1600640-1600659 None:intergenic 30.0%
CCCAATATAAATGATTGTAG+AGG - chr1.2:1600339-1600358 None:intergenic 30.0%
CCCTCTACAATCATTTATAT+TGG + chr1.2:1600335-1600354 MS.gene24213:intron 30.0%
CCTTCGTAAATTAAAATACC+TGG + chr1.2:1600201-1600220 MS.gene24213:CDS 30.0%
GATAAGAGTTTATATAGAGG+AGG + chr1.2:1600396-1600415 MS.gene24213:intron 30.0%
GTCTTGATGAGTTAATTATG+TGG + chr1.2:1601597-1601616 MS.gene24213:intron 30.0%
GTTAAAGCTAAGGGAAAAAA+GGG - chr1.2:1601025-1601044 None:intergenic 30.0%
GTTGAAAAATTGAGCTTAGA+AGG + chr1.2:1601230-1601249 MS.gene24213:intron 30.0%
TAACATCTGGTTAAAGCTAA+GGG - chr1.2:1601034-1601053 None:intergenic 30.0%
TCTCAAACCAATTCATAAGT+TGG - chr1.2:1600596-1600615 None:intergenic 30.0%
TTGCAACAAGCTATAGAAAA+AGG - chr1.2:1599993-1600012 None:intergenic 30.0%
TTGTTAACAGCGTTTATCAT+TGG + chr1.2:1601868-1601887 MS.gene24213:CDS 30.0%
! ACAATTGTTGTTGGAAAAGA+GGG - chr1.2:1601495-1601514 None:intergenic 30.0%
! TTGTCGCACTTTTATAAGAA+TGG + chr1.2:1601511-1601530 MS.gene24213:CDS 30.0%
! TTTTGTTCTTCCTATTTTCC+AGG + chr1.2:1599643-1599662 MS.gene24213:CDS 30.0%
!! AACTTTGAAGTTGATGTTGT+TGG - chr1.2:1601709-1601728 None:intergenic 30.0%
!! ACTTTGAAGTTGATGTTGTT+GGG - chr1.2:1601708-1601727 None:intergenic 30.0%
!! AGCAAAGAATGGATTTTGAT+TGG - chr1.2:1599687-1599706 None:intergenic 30.0%
!! GCTCAATTTTTCAACTTTTG+GGG - chr1.2:1601225-1601244 None:intergenic 30.0%
!! TTCATTGACTCCTAATTTGT+AGG + chr1.2:1601147-1601166 MS.gene24213:intron 30.0%
!!! CCAGGTATTTTAATTTACGA+AGG - chr1.2:1600204-1600223 None:intergenic 30.0%
!!! GCAAAGAATGGATTTTGATT+GGG - chr1.2:1599686-1599705 None:intergenic 30.0%
!!! GTTTTGTTTCTACAGATGTT+TGG + chr1.2:1600713-1600732 MS.gene24213:intron 30.0%
AAACTTTGCAGTGGTCATAT+AGG + chr1.2:1600680-1600699 MS.gene24213:intron 35.0%
AACAAACAAACCAACCAACT+AGG + chr1.2:1599805-1599824 MS.gene24213:intron 35.0%
AACTCATGCATGTATGGTTT+CGG + chr1.2:1601672-1601691 MS.gene24213:CDS 35.0%
AATAGGAAGAACAAAAGCTC+CGG - chr1.2:1599639-1599658 None:intergenic 35.0%
AATTTACGAAGGGAAAATGC+TGG - chr1.2:1600193-1600212 None:intergenic 35.0%
ACAATGCACAACATAAGCAA+GGG - chr1.2:1602045-1602064 None:intergenic 35.0%
ACACAGATGAACGTGAAATT+TGG - chr1.2:1600274-1600293 None:intergenic 35.0%
ACATGAGAGAAGAGTTACAT+AGG - chr1.2:1601450-1601469 None:intergenic 35.0%
ATAAATGATTGTAGAGGGCA+GGG - chr1.2:1600333-1600352 None:intergenic 35.0%
ATAAATGTTGTCCGGTTACT+AGG - chr1.2:1600938-1600957 None:intergenic 35.0%
ATACGAAACATTGACACAAG+TGG - chr1.2:1602143-1602162 None:intergenic 35.0%
ATGATTATCGCAACTTTGCA+TGG + chr1.2:1601994-1602013 MS.gene24213:CDS 35.0%
ATTTACGAAGGGAAAATGCT+GGG - chr1.2:1600192-1600211 None:intergenic 35.0%
CATGAGAGAAGAGTTACATA+GGG - chr1.2:1601449-1601468 None:intergenic 35.0%
CCAAGTACATATACAGACAA+GGG - chr1.2:1600832-1600851 None:intergenic 35.0%
CGATAATCATATGAGAAGGT+TGG - chr1.2:1601984-1602003 None:intergenic 35.0%
CTAACTCATCCTTACAAACT+CGG - chr1.2:1600440-1600459 None:intergenic 35.0%
CTCACATCATATGACTATCA+AGG + chr1.2:1602218-1602237 MS.gene24213:CDS 35.0%
GAATCATACGGTAGTTGTAA+TGG + chr1.2:1601533-1601552 MS.gene24213:CDS 35.0%
GACAGACAAGGTAAACATAT+AGG + chr1.2:1600973-1600992 MS.gene24213:intron 35.0%
GAGGGATTTGATGTGTATTA+CGG - chr1.2:1601477-1601496 None:intergenic 35.0%
GCATGTTTCAATAATTGGTG+TGG - chr1.2:1600641-1600660 None:intergenic 35.0%
GCTTGTAGGTTACTTGATTA+CGG + chr1.2:1601183-1601202 MS.gene24213:intron 35.0%
GGTTAAAGCTAAGGGAAAAA+AGG - chr1.2:1601026-1601045 None:intergenic 35.0%
GTTGCGATAATCATATGAGA+AGG - chr1.2:1601988-1602007 None:intergenic 35.0%
TACAATGCACAACATAAGCA+AGG - chr1.2:1602046-1602065 None:intergenic 35.0%
TACGAAACATTGACACAAGT+GGG - chr1.2:1602142-1602161 None:intergenic 35.0%
TAGGAAAGATTCCTAGTAAC+CGG + chr1.2:1600924-1600943 MS.gene24213:CDS 35.0%
TATAAATGATTGTAGAGGGC+AGG - chr1.2:1600334-1600353 None:intergenic 35.0%
TATGAAACCAACACAAACCT+TGG - chr1.2:1601571-1601590 None:intergenic 35.0%
TCAAAAGCAAACTTCCTAGT+TGG - chr1.2:1599822-1599841 None:intergenic 35.0%
TCCAAGTACATATACAGACA+AGG - chr1.2:1600833-1600852 None:intergenic 35.0%
TCTTGGCTTATCTCTTCAAT+TGG + chr1.2:1599409-1599428 MS.gene24213:CDS 35.0%
TGAAACAAGGACATATGGAA+TGG - chr1.2:1600789-1600808 None:intergenic 35.0%
TGATAGTCATATGATGTGAG+CGG - chr1.2:1602218-1602237 None:intergenic 35.0%
TGATGGAATTATGAGATCAG+CGG + chr1.2:1601749-1601768 MS.gene24213:CDS 35.0%
TGATTATCGCAACTTTGCAT+GGG + chr1.2:1601995-1602014 MS.gene24213:CDS 35.0%
TGCTATATCTAGAAGGACAT+TGG - chr1.2:1601845-1601864 None:intergenic 35.0%
TGGATTATAAGCAGTTCGTA+CGG + chr1.2:1601888-1601907 MS.gene24213:CDS 35.0%
TTCAGATTCAATGACAGACA+AGG + chr1.2:1600961-1600980 MS.gene24213:CDS 35.0%
TTTAACAGAGCCTGGAAAAT+AGG - chr1.2:1599656-1599675 None:intergenic 35.0%
! AAAAGTGCGACAATTGTTGT+TGG - chr1.2:1601504-1601523 None:intergenic 35.0%
! AGAGTCTTATCTATCCAATG+TGG - chr1.2:1600375-1600394 None:intergenic 35.0%
! CATAAGTTGGACTACATGAA+CGG - chr1.2:1600583-1600602 None:intergenic 35.0%
! GACAATTGTTGTTGGAAAAG+AGG - chr1.2:1601496-1601515 None:intergenic 35.0%
! GAGTCTTATCTATCCAATGT+GGG - chr1.2:1600374-1600393 None:intergenic 35.0%
! TATGTGCCTCCTTTTCATAA+AGG - chr1.2:1601381-1601400 None:intergenic 35.0%
!! ACAAGAGTGCTATATCTAGA+AGG - chr1.2:1601852-1601871 None:intergenic 35.0%
!! ATTGGTTTGAGAGCTTGAAA+AGG + chr1.2:1600604-1600623 MS.gene24213:intron 35.0%
!! GTTGGTTTGAAATTCCATGT+CGG - chr1.2:1600019-1600038 None:intergenic 35.0%
!! TAGAGACTGAAATTTTGGTG+TGG + chr1.2:1601285-1601304 MS.gene24213:intron 35.0%
!! TGCGTTTTAGATGTGTTCAA+CGG + chr1.2:1601327-1601346 MS.gene24213:intron 35.0%
!!! AAGTTTGCTTTTGAAGTTGC+TGG + chr1.2:1599828-1599847 MS.gene24213:CDS 35.0%
!!! CATAGGGTTTTGTTTCATGA+AGG - chr1.2:1601433-1601452 None:intergenic 35.0%
AAAGGAAGAGGATGTTCAGT+TGG - chr1.2:1601807-1601826 None:intergenic 40.0%
AAGAATGGCGATCAAATCCT+TGG + chr1.2:1602176-1602195 MS.gene24213:CDS 40.0%
AAGCAAACTTCCTAGTTGGT+TGG - chr1.2:1599818-1599837 None:intergenic 40.0%
AAGGAAGAGGATGTTCAGTT+GGG - chr1.2:1601806-1601825 None:intergenic 40.0%
ACTTGTGCTTGAATCTTTCG+CGG - chr1.2:1599470-1599489 None:intergenic 40.0%
AGAACCCCACCTTTATGAAA+AGG + chr1.2:1601369-1601388 MS.gene24213:intron 40.0%
AGGTTGCTGTAAAATCTCGT+TGG - chr1.2:1600037-1600056 None:intergenic 40.0%
AGTGGTCATATAGGTGTTAG+GGG + chr1.2:1600689-1600708 MS.gene24213:intron 40.0%
ATCTATCCAATGTGGGACTT+GGG - chr1.2:1600367-1600386 None:intergenic 40.0%
CAGTGGTCATATAGGTGTTA+GGG + chr1.2:1600688-1600707 MS.gene24213:intron 40.0%
CCCTTGTCTGTATATGTACT+TGG + chr1.2:1600829-1600848 MS.gene24213:intron 40.0%
CGAGTTTGTAAGGATGAGTT+AGG + chr1.2:1600438-1600457 MS.gene24213:intron 40.0%
GAAGTGAAATACGTACCTTG+AGG - chr1.2:1599723-1599742 None:intergenic 40.0%
GAGATCACACAAGCAAAGAA+TGG - chr1.2:1599698-1599717 None:intergenic 40.0%
GCTTATAATTCGATTCCAGC+AGG - chr1.2:1600877-1600896 None:intergenic 40.0%
GTGTCAATGTTTCGTATGTG+TGG + chr1.2:1602146-1602165 MS.gene24213:CDS 40.0%
GTTGATGTTGTTGGGATCAT+CGG - chr1.2:1601700-1601719 None:intergenic 40.0%
TAAATGATTGTAGAGGGCAG+GGG - chr1.2:1600332-1600351 None:intergenic 40.0%
TATCTATCCAATGTGGGACT+TGG - chr1.2:1600368-1600387 None:intergenic 40.0%
TCATGAAGGATCATGAGACT+AGG - chr1.2:1601419-1601438 None:intergenic 40.0%
TCATTATCATATGCTGCTGC+TGG + chr1.2:1599951-1599970 MS.gene24213:intron 40.0%
TCTGTATATGTACTTGGACC+AGG + chr1.2:1600835-1600854 MS.gene24213:intron 40.0%
TTAGATGTGTTCAACGGTCT+TGG + chr1.2:1601333-1601352 MS.gene24213:intron 40.0%
TTTACGAAGGGAAAATGCTG+GGG - chr1.2:1600191-1600210 None:intergenic 40.0%
TTTGATCGCCATTCTTCCAA+AGG - chr1.2:1602172-1602191 None:intergenic 40.0%
! GTGGTCTTAGTAAAAGGAAG+AGG - chr1.2:1601819-1601838 None:intergenic 40.0%
! GTTACTTTCTGTGTGCTTGT+AGG + chr1.2:1601169-1601188 MS.gene24213:intron 40.0%
! TGCCTCCTTTTCATAAAGGT+GGG - chr1.2:1601377-1601396 None:intergenic 40.0%
! TGGCACAAAAAGTGCAACAT+TGG + chr1.2:1602116-1602135 MS.gene24213:CDS 40.0%
! TGGTGTGTGGTCTTAGTAAA+AGG - chr1.2:1601825-1601844 None:intergenic 40.0%
!! AACCAACCTTCTAAAGCAAG+GGG - chr1.2:1599497-1599516 None:intergenic 40.0%
!! ATTTGGGTGATGGATCAAAG+TGG + chr1.2:1602092-1602111 MS.gene24213:CDS 40.0%
!! CAACCAACCTTCTAAAGCAA+GGG - chr1.2:1599498-1599517 None:intergenic 40.0%
!!! GAATGGATTTTGATTGGGTC+CGG - chr1.2:1599681-1599700 None:intergenic 40.0%
AACAAAAGCTCCGGTCTTAC+CGG - chr1.2:1599630-1599649 None:intergenic 45.0%
AACCAGTTTCACCAACTCAG+AGG + chr1.2:1601957-1601976 MS.gene24213:CDS 45.0%
AATGGCGATCAAATCCTTGG+AGG + chr1.2:1602179-1602198 MS.gene24213:CDS 45.0%
ACATGCATGAGTTGCTGTCA+AGG - chr1.2:1601665-1601684 None:intergenic 45.0%
ACCAGTTTCACCAACTCAGA+GGG + chr1.2:1601958-1601977 MS.gene24213:CDS 45.0%
ACCCAAATGCTCAAGATGAC+GGG - chr1.2:1602080-1602099 None:intergenic 45.0%
ACCCCACCTTTATGAAAAGG+AGG + chr1.2:1601372-1601391 MS.gene24213:CDS 45.0%
AGCAAGGGAACCTTTGATCT+CGG - chr1.2:1602030-1602049 None:intergenic 45.0%
AGGAAGAGGATGTTCAGTTG+GGG - chr1.2:1601805-1601824 None:intergenic 45.0%
CAAATCCTTGGAGGAAAGGT+TGG + chr1.2:1602188-1602207 MS.gene24213:CDS 45.0%
CACCCAAATGCTCAAGATGA+CGG - chr1.2:1602081-1602100 None:intergenic 45.0%
CATCTTGAGCATTTGGGTGA+TGG + chr1.2:1602082-1602101 MS.gene24213:CDS 45.0%
CCTTACAAGCCGAGTTTGTA+AGG + chr1.2:1600428-1600447 MS.gene24213:intron 45.0%
CGATCAAATCCTTGGAGGAA+AGG + chr1.2:1602184-1602203 MS.gene24213:CDS 45.0%
CTTGTGTGATCTCTTCCTCA+AGG + chr1.2:1599705-1599724 MS.gene24213:CDS 45.0%
GAAAAACCCAAGTCCCACAT+TGG + chr1.2:1600358-1600377 MS.gene24213:intron 45.0%
GACAGCAACTCATGCATGTA+TGG + chr1.2:1601666-1601685 MS.gene24213:CDS 45.0%
GATTGTGTTGCCGAGATCAA+AGG + chr1.2:1602017-1602036 MS.gene24213:CDS 45.0%
GCAGTGGTCATATAGGTGTT+AGG + chr1.2:1600687-1600706 MS.gene24213:intron 45.0%
TCCCGTCATCTTGAGCATTT+GGG + chr1.2:1602076-1602095 MS.gene24213:CDS 45.0%
TCTAGAAGGACATTGGTGTG+TGG - chr1.2:1601838-1601857 None:intergenic 45.0%
TCTGTCTCCAAGGTTTGTGT+TGG + chr1.2:1601561-1601580 MS.gene24213:intron 45.0%
TGTTTCGTATGTGTGGCCTT+TGG + chr1.2:1602153-1602172 MS.gene24213:CDS 45.0%
TTCCAGGCTCTGTTAAATGC+CGG + chr1.2:1599659-1599678 MS.gene24213:CDS 45.0%
! AAAATGCTGGGGTGTCTTTC+AGG - chr1.2:1600180-1600199 None:intergenic 45.0%
! AATGGCGTTTTCTGTCTCCA+AGG + chr1.2:1601551-1601570 MS.gene24213:CDS 45.0%
! ACAAACTCGGCTTGTAAGGT+GGG - chr1.2:1600427-1600446 None:intergenic 45.0%
! AGGTGTTTGACGAGTTTTCC+AGG - chr1.2:1600160-1600179 None:intergenic 45.0%
! ATGTGTGGCCTTTGGAAGAA+TGG + chr1.2:1602161-1602180 MS.gene24213:CDS 45.0%
! CCTTACAAACTCGGCTTGTA+AGG - chr1.2:1600431-1600450 None:intergenic 45.0%
! GCCTCCTTTTCATAAAGGTG+GGG - chr1.2:1601376-1601395 None:intergenic 45.0%
! GGTTTGAAATTCCATGTCGG+AGG - chr1.2:1600016-1600035 None:intergenic 45.0%
! GTGCCTCCTTTTCATAAAGG+TGG - chr1.2:1601378-1601397 None:intergenic 45.0%
! GTTGGTGAAACTGGTTGTTG+CGG - chr1.2:1601953-1601972 None:intergenic 45.0%
! TACAAACTCGGCTTGTAAGG+TGG - chr1.2:1600428-1600447 None:intergenic 45.0%
! TGAAGTTGCTGGCTACTTTG+AGG + chr1.2:1599839-1599858 MS.gene24213:CDS 45.0%
!! ACCAACCTTCTAAAGCAAGG+GGG - chr1.2:1599496-1599515 None:intergenic 45.0%
!! CCAACCAACCTTCTAAAGCA+AGG - chr1.2:1599499-1599518 None:intergenic 45.0%
!! CCTTGCTTTAGAAGGTTGGT+TGG + chr1.2:1599496-1599515 MS.gene24213:intron 45.0%
!! GACTCCAAAGTGTTGACCTA+GGG - chr1.2:1599865-1599884 None:intergenic 45.0%
!! TGACTCCAAAGTGTTGACCT+AGG - chr1.2:1599866-1599885 None:intergenic 45.0%
!! AAAAAATACAATAAAAATAT+TGG - chr1.2:1601110-1601129 None:intergenic 5.0%
AGTTGCTGTCAAGGCAGACT+CGG - chr1.2:1601656-1601675 None:intergenic 50.0%
CTCCCGTCATCTTGAGCATT+TGG + chr1.2:1602075-1602094 MS.gene24213:CDS 50.0%
CTCTTCAAGGTTGTGACTCC+TGG + chr1.2:1600139-1600158 MS.gene24213:intron 50.0%
CTTGGACCAGGTCATAGATG+AGG + chr1.2:1600847-1600866 MS.gene24213:intron 50.0%
GGTGGACCTCTCTAGTTGTT+GGG - chr1.2:1601625-1601644 None:intergenic 50.0%
GTGGAACCCAACAACTAGAG+AGG + chr1.2:1601616-1601635 MS.gene24213:intron 50.0%
GTTCTCCAACCTTTCCTCCA+AGG - chr1.2:1602196-1602215 None:intergenic 50.0%
GTTGACAAGGGAGCTATGCT+TGG - chr1.2:1602302-1602321 None:intergenic 50.0%
TATCATATGCTGCTGCTGGC+TGG + chr1.2:1599955-1599974 MS.gene24213:intron 50.0%
TTCAGTTGGGGTCCAAGAGT+TGG - chr1.2:1601793-1601812 None:intergenic 50.0%
! CAAACTCGGCTTGTAAGGTG+GGG - chr1.2:1600426-1600445 None:intergenic 50.0%
! GTCATCCCCCTTGCTTTAGA+AGG + chr1.2:1599488-1599507 MS.gene24213:CDS 50.0%
! TGGTGGACCTCTCTAGTTGT+TGG - chr1.2:1601626-1601645 None:intergenic 50.0%
!! GGGTGATGGATCAAAGTGGA+TGG + chr1.2:1602096-1602115 MS.gene24213:CDS 50.0%
!! TCCCCCTTGCTTTAGAAGGT+TGG + chr1.2:1599492-1599511 MS.gene24213:intron 50.0%
AAGGCAGACTCGGAGGAACT+TGG - chr1.2:1601646-1601665 None:intergenic 55.0%
CATAGATGAGGCACACCTGC+TGG + chr1.2:1600859-1600878 MS.gene24213:CDS 55.0%
GAGGCCCTAGGTCAACACTT+TGG + chr1.2:1599858-1599877 MS.gene24213:CDS 55.0%
GCCATTTCTCCACCACGTTC+CGG + chr1.2:1599608-1599627 MS.gene24213:CDS 55.0%
GGTGTGCCTCATCTATGACC+TGG - chr1.2:1600856-1600875 None:intergenic 55.0%
GTCCGGCATTTAACAGAGCC+TGG - chr1.2:1599664-1599683 None:intergenic 55.0%
! ACCGGAACGTGGTGGAGAAA+TGG - chr1.2:1599612-1599631 None:intergenic 55.0%
! AGAAGGTTGGCCCTCTGAGT+TGG - chr1.2:1601971-1601990 None:intergenic 55.0%
! GCTTGTTGCAACCTCCGACA+TGG + chr1.2:1600002-1600021 MS.gene24213:intron 55.0%
!! GCCCTCTGAGTTGGTGAAAC+TGG - chr1.2:1601962-1601981 None:intergenic 55.0%
CCACCACGTTCCGGTAAGAC+CGG + chr1.2:1599617-1599636 MS.gene24213:CDS 60.0%
GCAGACTCGGAGGAACTTGG+TGG - chr1.2:1601643-1601662 None:intergenic 60.0%
TGCTGTCAAGGCAGACTCGG+AGG - chr1.2:1601653-1601672 None:intergenic 60.0%
!! GCTGGCTACTTTGAGGCCCT+AGG + chr1.2:1599846-1599865 MS.gene24213:CDS 60.0%
CCGGTCTTACCGGAACGTGG+TGG - chr1.2:1599620-1599639 None:intergenic 65.0%
GCTCCGGTCTTACCGGAACG+TGG - chr1.2:1599623-1599642 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 1599392 1602325 1599392 ID=MS.gene24213
chr1.2 mRNA 1599392 1602325 1599392 ID=MS.gene24213.t1;Parent=MS.gene24213
chr1.2 exon 1599392 1599509 1599392 ID=MS.gene24213.t1.exon1;Parent=MS.gene24213.t1
chr1.2 CDS 1599392 1599509 1599392 ID=cds.MS.gene24213.t1;Parent=MS.gene24213.t1
chr1.2 exon 1599594 1599726 1599594 ID=MS.gene24213.t1.exon2;Parent=MS.gene24213.t1
chr1.2 CDS 1599594 1599726 1599594 ID=cds.MS.gene24213.t1;Parent=MS.gene24213.t1
chr1.2 exon 1599827 1599896 1599827 ID=MS.gene24213.t1.exon3;Parent=MS.gene24213.t1
chr1.2 CDS 1599827 1599896 1599827 ID=cds.MS.gene24213.t1;Parent=MS.gene24213.t1
chr1.2 exon 1600003 1600065 1600003 ID=MS.gene24213.t1.exon4;Parent=MS.gene24213.t1
chr1.2 CDS 1600003 1600065 1600003 ID=cds.MS.gene24213.t1;Parent=MS.gene24213.t1
chr1.2 exon 1600148 1600222 1600148 ID=MS.gene24213.t1.exon5;Parent=MS.gene24213.t1
chr1.2 CDS 1600148 1600222 1600148 ID=cds.MS.gene24213.t1;Parent=MS.gene24213.t1
chr1.2 exon 1600857 1600982 1600857 ID=MS.gene24213.t1.exon6;Parent=MS.gene24213.t1
chr1.2 CDS 1600857 1600982 1600857 ID=cds.MS.gene24213.t1;Parent=MS.gene24213.t1
chr1.2 exon 1601371 1601572 1601371 ID=MS.gene24213.t1.exon7;Parent=MS.gene24213.t1
chr1.2 CDS 1601371 1601572 1601371 ID=cds.MS.gene24213.t1;Parent=MS.gene24213.t1
chr1.2 exon 1601634 1602325 1601634 ID=MS.gene24213.t1.exon8;Parent=MS.gene24213.t1
chr1.2 CDS 1601634 1602325 1601634 ID=cds.MS.gene24213.t1;Parent=MS.gene24213.t1
Gene Sequence

>MS.gene24213

ATGAAATCATTTACGGATCTTGGCTTATCTCTTCAATTGGTTGAAGTTTGTGAAAAACAACTCAATTGGTATGATCCGCGAAAGATTCAAGCACAAGTCATCCCCCTTGCTTTAGAAGGTTGGTTGGTTAGTTAATTAAATGTAATCTCAAATTTATTTTATTTTATTTATTGAATTATTAATATGAATTCAATTTCTACAGGAAAAGATGTGTTTGCCATTTCTCCACCACGTTCCGGTAAGACCGGAGCTTTTGTTCTTCCTATTTTCCAGGCTCTGTTAAATGCCGGACCCAATCAAAATCCATTCTTTGCTTGTGTGATCTCTTCCTCAAGGTACGTATTTCACTTCACTTCTTAGATACACATATACATACATAATCATTTATCTCATCACTAATCATATTTATCTTAAACAAACAAACCAACCAACTAGGAAGTTTGCTTTTGAAGTTGCTGGCTACTTTGAGGCCCTAGGTCAACACTTTGGAGTCAAGTTTGCTCTCGTGAGTTTTTTTTTTTTTTCTTTTCTTTTCTTTTTCTTTCAATCAACTTTATGTTCATTATCATATGCTGCTGCTGGCTGGTTACTAAAATTGCCTTTTTCTATAGCTTGTTGCAACCTCCGACATGGAATTTCAAACCAACGAGATTTTACAGCAACCTCATATCATTGTAAGTAGTGTCGTTACGTTACTCTTGAAACTTTATCTATTTCAATTTACCACTCCTTCTAATTGATTTCTTACTCTTCAAGGTTGTGACTCCTGGAAAACTCGTCAAACACCTGAAAGACACCCCAGCATTTTCCCTTCGTAAATTAAAATACCTGGTATGAATTATTCATCTGTTATGTTATTTGATTCAGTAGTAATGCAAACCAAATTTCACGTTCATCTGTGTTGTTGATAGTATTTTCTGCATCATTAAATGCATGTCCCCTGCCCTCTACAATCATTTATATTGGGAAAAACCCAAGTCCCACATTGGATAGATAAGACTCTTGATAAGAGTTTATATAGAGGAGGAAATCCCCACCTTACAAGCCGAGTTTGTAAGGATGAGTTAGGCCCCAAATTTCAACAATTTACTCTTGGTTGAGTGTTTTTTTTTGTTTCGTATACAAGTACCTTTCAATAGTAATCTTTATTAATTCAATATTTTTAGAACTCTCAAGGATAATAAATTACCGTTCATGTAGTCCAACTTATGAATTGGTTTGAGAGCTTGAAAAGGTTTTTTTCAACCCACACCAATTATTGAAACATGCAGTTATGTTTATATCAAAGAAACTTTGCAGTGGTCATATAGGTGTTAGGGGTGTTTTGTTTCTACAGATGTTTGGACCTGTTTCTAACTTTACAAAATGAAATATTTAATATATTTTGTTTTCTACCATTCCATATGTCCTTGTTTCATATATTTTACGTTCACATGTCCCTTGTCTGTATATGTACTTGGACCAGGTCATAGATGAGGCACACCTGCTGGAATCGAATTATAAGCACATTGATAAACAACTTGAGTTTATTTTAGGAAAGATTCCTAGTAACCGGACAACATTTATTTTTTCAGATTCAATGACAGACAAGGTAAACATATAGGTTTATTAATTTAATATTTTTTGCTAACCCTTTTTTCCCTTAGCTTTAACCAGATGTTATATCTTAATATTTTAATAAAACCTTTTTATTTATATCTTTTGAGAGATCACATCCAATATTTTTATTGTATTTTTTCAAAAAATAAAGTTTGTTTCATTGACTCCTAATTTGTAGGTTACTTTCTGTGTGCTTGTAGGTTACTTGATTACGGCTTGTTATTATAGAAACCCCAAAAGTTGAAAAATTGAGCTTAGAAGGGATATCAGAGAAGATGAATTTAGGAATAGATTTAGAGACTGAAATTTTGGTGTGGCTTCCTCTAAATTCATTGATGCGTTTTAGATGTGTTCAACGGTCTTGGAATGATCTTACTCAGAACCCCACCTTTATGAAAAGGAGGCACATAAACATGTCTGATAGTCCTAGTCTCATGATCCTTCATGAAACAAAACCCTATGTAACTCTTCTCTCATGTGACACCGTAATACACATCAAATCCCTCTTTTCCAACAACAATTGTCGCACTTTTATAAGAATGGAATCATACGGTAGTTGTAATGGCGTTTTCTGTCTCCAAGGTTTGTGTTGGTTTCATAAGAGTTGTCTTGATGAGTTAATTATGTGGAACCCAACAACTAGAGAGGTCCACCAAGTTCCTCCGAGTCTGCCTTGACAGCAACTCATGCATGTATGGTTTCGGTGCCGATGATCCCAACAACATCAACTTCAAAGTTGTGAAACTCCATACTAGTTATGATGGAATTATGAGATCAGCGGAAGTTTATAACTTAAGTACCAACTCTTGGACCCCAACTGAACATCCTCTTCCTTTTACTAAGACCACACACCAATGTCCTTCTAGATATAGCACTCTTGTTAACAGCGTTTATCATTGGATTATAAGCAGTTCGTACGGCAATCGCCATTTTGTTGCAAATATTCTATGCTTTGACTTCCGCAACAACCAGTTTCACCAACTCAGAGGGCCAACCTTCTCATATGATTATCGCAACTTTGCATGGGATTGTGTTGCCGAGATCAAAGGTTCCCTTGCTTATGTTGTGCATTGTAACTTCAATGCTCCCGTCATCTTGAGCATTTGGGTGATGGATCAAAGTGGATGGCACAAAAAGTGCAACATTGGCCCACTTGTGTCAATGTTTCGTATGTGTGGCCTTTGGAAGAATGGCGATCAAATCCTTGGAGGAAAGGTTGGAGAACCGCTCACATCATATGACTATCAAGGCAACTCACTTGACCAATTTCAAATTGATGTTGATTATATTAAACTTCATGAGTATGTGCCAAGCATAGCTCCCTTGTCAACCTAG

Protein sequence

>MS.gene24213.t1

MKSFTDLGLSLQLVEVCEKQLNWYDPRKIQAQVIPLALEGKDVFAISPPRSGKTGAFVLPIFQALLNAGPNQNPFFACVISSSRKFAFEVAGYFEALGQHFGVKFALLVATSDMEFQTNEILQQPHIIVVTPGKLVKHLKDTPAFSLRKLKYLVIDEAHLLESNYKHIDKQLEFILGKIPSNRTTFIFSDSMTDKNPTFMKRRHINMSDSPSLMILHETKPYVTLLSCDTVIHIKSLFSNNNCRTFIRMESYGSCNGVFCLQERSTKFLRVCLDSNSCMYGFGADDPNNINFKVVKLHTSYDGIMRSAEVYNLSTNSWTPTEHPLPFTKTTHQCPSRYSTLVNSVYHWIISSSYGNRHFVANILCFDFRNNQFHQLRGPTFSYDYRNFAWDCVAEIKGSLAYVVHCNFNAPVILSIWVMDQSGWHKKCNIGPLVSMFRMCGLWKNGDQILGGKVGEPLTSYDYQGNSLDQFQIDVDYIKLHEYVPSIAPLST