AlfalfaGEDB | MS.gene046958

M. sativa cultivar XinJiangDaYe / MS.gene046958

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene046958.t1	XP_003612254.2	92.9	99	7	0	44	142	1	99	2.30E-47	198.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene046958.t1	G7JYR5	92.9	99	7	0	44	142	1	99	1.7e-47	198.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene058694	MS.gene046958	PPI
MS.gene046958	MS.gene58315	PPI
MS.gene046958	MS.gene80610	PPI
MS.gene015089	MS.gene046958	PPI
MS.gene006710	MS.gene046958	PPI
MS.gene046958	MS.gene90743	PPI
MS.gene011679	MS.gene046958	PPI
MS.gene046958	MS.gene85454	PPI
MS.gene64001	MS.gene046958	PPI
MS.gene046958	MS.gene036556	PPI
MS.gene57533	MS.gene046958	PPI
MS.gene36704	MS.gene046958	PPI
MS.gene032970	MS.gene046958	PPI
MS.gene046958	MS.gene27319	PPI
MS.gene77856	MS.gene046958	PPI
MS.gene40887	MS.gene046958	PPI
MS.gene046958	MS.gene058701	PPI
MS.gene63655	MS.gene046958	PPI
MS.gene046958	MS.gene064083	PPI
MS.gene44883	MS.gene046958	PPI
MS.gene046958	MS.gene58783	PPI
MS.gene046958	MS.gene024420	PPI
MS.gene41046	MS.gene046958	PPI
MS.gene046958	MS.gene024008	PPI
MS.gene046958	MS.gene50337	PPI
MS.gene017412	MS.gene046958	PPI
MS.gene57529	MS.gene046958	PPI
MS.gene046958	MS.gene54541	PPI
MS.gene046958	MS.gene39265	PPI
MS.gene046958	MS.gene036584	PPI
MS.gene80884	MS.gene046958	PPI
MS.gene046958	MS.gene060368	PPI
MS.gene046958	MS.gene053299	PPI
MS.gene51192	MS.gene046958	PPI
MS.gene009883	MS.gene046958	PPI
MS.gene046958	MS.gene28758	PPI
MS.gene046958	MS.gene044429	PPI
MS.gene046958	MS.gene42451	PPI
MS.gene40902	MS.gene046958	PPI
MS.gene044563	MS.gene046958	PPI
MS.gene033427	MS.gene046958	PPI
MS.gene27051	MS.gene046958	PPI
MS.gene40985	MS.gene046958	PPI
MS.gene046958	MS.gene69307	PPI
MS.gene060368	MS.gene046958	PPI
MS.gene041474	MS.gene046958	PPI
MS.gene27020	MS.gene046958	PPI
MS.gene066620	MS.gene046958	PPI
MS.gene035236	MS.gene046958	PPI
MS.gene046958	MS.gene033431	PPI
MS.gene041388	MS.gene046958	PPI
MS.gene51208	MS.gene046958	PPI
MS.gene046958	MS.gene034762	PPI
MS.gene046958	MS.gene59943	PPI
MS.gene045475	MS.gene046958	PPI
MS.gene88776	MS.gene046958	PPI
MS.gene046958	MS.gene67501	PPI
MS.gene046958	MS.gene96406	PPI
MS.gene35068	MS.gene046958	PPI
MS.gene90744	MS.gene046958	PPI
MS.gene046958	MS.gene035262	PPI
MS.gene51204	MS.gene046958	PPI
MS.gene036557	MS.gene046958	PPI
MS.gene50329	MS.gene046958	PPI
MS.gene046958	MS.gene028390	PPI
MS.gene31637	MS.gene046958	PPI
MS.gene046958	MS.gene40878	PPI
MS.gene57537	MS.gene046958	PPI
MS.gene059156	MS.gene046958	PPI
MS.gene046958	MS.gene058703	PPI
MS.gene84698	MS.gene046958	PPI
MS.gene046958	MS.gene012215	PPI
MS.gene009891	MS.gene046958	PPI
MS.gene82082	MS.gene046958	PPI
MS.gene50306	MS.gene046958	PPI
MS.gene046958	MS.gene22715	PPI
MS.gene57535	MS.gene046958	PPI
MS.gene046958	MS.gene58316	PPI
MS.gene046958	MS.gene51207	PPI
MS.gene046958	MS.gene58321	PPI
MS.gene87200	MS.gene046958	PPI
MS.gene046958	MS.gene87564	PPI
MS.gene046958	MS.gene36595	PPI
MS.gene046958	MS.gene024004	PPI
MS.gene033432	MS.gene046958	PPI
MS.gene046958	MS.gene045140	PPI
MS.gene046958	MS.gene061240	PPI
MS.gene59639	MS.gene046958	PPI
MS.gene44885	MS.gene046958	PPI
MS.gene046958	MS.gene041473	PPI
MS.gene060370	MS.gene046958	PPI
MS.gene046958	MS.gene50311	PPI
MS.gene50327	MS.gene046958	PPI
MS.gene066635	MS.gene046958	PPI
MS.gene046958	MS.gene035234	PPI
MS.gene046958	MS.gene058989	PPI
MS.gene046958	MS.gene57538	PPI
MS.gene046958	MS.gene041468	PPI
MS.gene010758	MS.gene046958	PPI
MS.gene046958	MS.gene058693	PPI
MS.gene87586	MS.gene046958	PPI
MS.gene046958	MS.gene041395	PPI
MS.gene57530	MS.gene046958	PPI
MS.gene046958	MS.gene42447	PPI
MS.gene50326	MS.gene046958	PPI
MS.gene046958	MS.gene51189	PPI
MS.gene51200	MS.gene046958	PPI
MS.gene50339	MS.gene046958	PPI
MS.gene046958	MS.gene24286	PPI
MS.gene060366	MS.gene046958	PPI
MS.gene046958	MS.gene044425	PPI
MS.gene88774	MS.gene046958	PPI
MS.gene046958	MS.gene40988	PPI
MS.gene42452	MS.gene046958	PPI
MS.gene046958	MS.gene59637	PPI
MS.gene046958	MS.gene24173	PPI
MS.gene063414	MS.gene046958	PPI
MS.gene046958	MS.gene036662	PPI
MS.gene046958	MS.gene27022	PPI
MS.gene046958	MS.gene035261	PPI
MS.gene57526	MS.gene046958	PPI
MS.gene046958	MS.gene87585	PPI
MS.gene046958	MS.gene023999	PPI
MS.gene021553	MS.gene046958	PPI
MS.gene26957	MS.gene046958	PPI
MS.gene033875	MS.gene046958	PPI
MS.gene97996	MS.gene046958	PPI
MS.gene036582	MS.gene046958	PPI
MS.gene27021	MS.gene046958	PPI
MS.gene58320	MS.gene046958	PPI
MS.gene26101	MS.gene046958	PPI
MS.gene046958	MS.gene036581	PPI
MS.gene046958	MS.gene019507	PPI
MS.gene046958	MS.gene035237	PPI
MS.gene046958	MS.gene000036	PPI
MS.gene58781	MS.gene046958	PPI
MS.gene028390	MS.gene046958	PPI
MS.gene011106	MS.gene046958	PPI
MS.gene033440	MS.gene046958	PPI
MS.gene62398	MS.gene046958	PPI
MS.gene046958	MS.gene50320	PPI
MS.gene60027	MS.gene046958	PPI
MS.gene046958	MS.gene58314	PPI
MS.gene046958	MS.gene87557	PPI
MS.gene44886	MS.gene046958	PPI
MS.gene046958	MS.gene035263	PPI
MS.gene038756	MS.gene046958	PPI
MS.gene40904	MS.gene046958	PPI
MS.gene046958	MS.gene053257	PPI
MS.gene041390	MS.gene046958	PPI
MS.gene24286	MS.gene046958	PPI
MS.gene92376	MS.gene046958	PPI
MS.gene046958	MS.gene77858	PPI
MS.gene046958	MS.gene51201	PPI
MS.gene000035	MS.gene046958	PPI
MS.gene87569	MS.gene046958	PPI
MS.gene046958	MS.gene50336	PPI
MS.gene87573	MS.gene046958	PPI
MS.gene041491	MS.gene046958	PPI
MS.gene046958	MS.gene77704	PPI
MS.gene019504	MS.gene046958	PPI
MS.gene034762	MS.gene046958	PPI
MS.gene059096	MS.gene046958	PPI
MS.gene57528	MS.gene046958	PPI
MS.gene50297	MS.gene046958	PPI
MS.gene046958	MS.gene047279	PPI
MS.gene046958	MS.gene50305	PPI
MS.gene006711	MS.gene046958	PPI
MS.gene046958	MS.gene032969	PPI
MS.gene27285	MS.gene046958	PPI
MS.gene58716	MS.gene046958	PPI
MS.gene033444	MS.gene046958	PPI
MS.gene046958	MS.gene68890	PPI
MS.gene019505	MS.gene046958	PPI
MS.gene58785	MS.gene046958	PPI
MS.gene046958	MS.gene42445	PPI
MS.gene046958	MS.gene86273	PPI
MS.gene046958	MS.gene036663	PPI
MS.gene034690	MS.gene046958	PPI
MS.gene046958	MS.gene26830	PPI
MS.gene066639	MS.gene046958	PPI
MS.gene26949	MS.gene046958	PPI
MS.gene96407	MS.gene046958	PPI
MS.gene50309	MS.gene046958	PPI
MS.gene036760	MS.gene046958	PPI
MS.gene046958	MS.gene63657	PPI
MS.gene046958	MS.gene059157	PPI
MS.gene77857	MS.gene046958	PPI
MS.gene046958	MS.gene023996	PPI
MS.gene58311	MS.gene046958	PPI
MS.gene57527	MS.gene046958	PPI
MS.gene51191	MS.gene046958	PPI
MS.gene046958	MS.gene045473	PPI
MS.gene046958	MS.gene50301	PPI
MS.gene046958	MS.gene070462	PPI
MS.gene046958	MS.gene031590	PPI
MS.gene033426	MS.gene046958	PPI
MS.gene50298	MS.gene046958	PPI
MS.gene67687	MS.gene046958	PPI
MS.gene046958	MS.gene066623	PPI
MS.gene046958	MS.gene064086	PPI
MS.gene035261	MS.gene046958	PPI
MS.gene046958	MS.gene064090	PPI
MS.gene046958	MS.gene58317	PPI
MS.gene063670	MS.gene046958	PPI
MS.gene046958	MS.gene90742	PPI
MS.gene046958	MS.gene24212	PPI
MS.gene046958	MS.gene50332	PPI
MS.gene019506	MS.gene046958	PPI
MS.gene046958	MS.gene024979	PPI
MS.gene058692	MS.gene046958	PPI
MS.gene033083	MS.gene046958	PPI
MS.gene69309	MS.gene046958	PPI
MS.gene63658	MS.gene046958	PPI
MS.gene024002	MS.gene046958	PPI
MS.gene046958	MS.gene24826	PPI
MS.gene046958	MS.gene063472	PPI
MS.gene046958	MS.gene43790	PPI
MS.gene034686	MS.gene046958	PPI
MS.gene40982	MS.gene046958	PPI
MS.gene070461	MS.gene046958	PPI
MS.gene046958	MS.gene88416	PPI
MS.gene046958	MS.gene57530	PPI
MS.gene036662	MS.gene046958	PPI
MS.gene046958	MS.gene003076	PPI
MS.gene87563	MS.gene046958	PPI
MS.gene033431	MS.gene046958	PPI
MS.gene046958	MS.gene024009	PPI
MS.gene046958	MS.gene036599	PPI
MS.gene051820	MS.gene046958	PPI
MS.gene041475	MS.gene046958	PPI
MS.gene046958	MS.gene006705	PPI
MS.gene046958	MS.gene061241	PPI
MS.gene81242	MS.gene046958	PPI
MS.gene27283	MS.gene046958	PPI
MS.gene64203	MS.gene046958	PPI
MS.gene045140	MS.gene046958	PPI
MS.gene046958	MS.gene51188	PPI
MS.gene024004	MS.gene046958	PPI
MS.gene42444	MS.gene046958	PPI
MS.gene51202	MS.gene046958	PPI
MS.gene046958	MS.gene38220	PPI
MS.gene046958	MS.gene40986	PPI
MS.gene046958	MS.gene50309	PPI
MS.gene046958	MS.gene041394	PPI
MS.gene87562	MS.gene046958	PPI
MS.gene046958	MS.gene03060	PPI
MS.gene046958	MS.gene033440	PPI
MS.gene046958	MS.gene036664	PPI
MS.gene046958	MS.gene024011	PPI
MS.gene046958	MS.gene58241	PPI
MS.gene046958	MS.gene064109	PPI
MS.gene046958	MS.gene058696	PPI
MS.gene046958	MS.gene009893	PPI
MS.gene26829	MS.gene046958	PPI
MS.gene064104	MS.gene046958	PPI
MS.gene046958	MS.gene85043	PPI
MS.gene033443	MS.gene046958	PPI
MS.gene54049	MS.gene046958	PPI
MS.gene43789	MS.gene046958	PPI
MS.gene046958	MS.gene033083	PPI
MS.gene072177	MS.gene046958	PPI
MS.gene58722	MS.gene046958	PPI
MS.gene064091	MS.gene046958	PPI
MS.gene064112	MS.gene046958	PPI
MS.gene046958	MS.gene40886	PPI
MS.gene045476	MS.gene046958	PPI
MS.gene24208	MS.gene046958	PPI
MS.gene50307	MS.gene046958	PPI
MS.gene43796	MS.gene046958	PPI
MS.gene046958	MS.gene68580	PPI
MS.gene046958	MS.gene041391	PPI
MS.gene58312	MS.gene046958	PPI
MS.gene046958	MS.gene033443	PPI
MS.gene046958	MS.gene57525	PPI
MS.gene046958	MS.gene030114	PPI
MS.gene58313	MS.gene046958	PPI
MS.gene046958	MS.gene045474	PPI
MS.gene046958	MS.gene036558	PPI
MS.gene066622	MS.gene046958	PPI
MS.gene44887	MS.gene046958	PPI
MS.gene85043	MS.gene046958	PPI
MS.gene046958	MS.gene87554	PPI
MS.gene046958	MS.gene009891	PPI
MS.gene033430	MS.gene046958	PPI
MS.gene046958	MS.gene27051	PPI
MS.gene046958	MS.gene40984	PPI
MS.gene046958	MS.gene064108	PPI
MS.gene046958	MS.gene048193	PPI
MS.gene036583	MS.gene046958	PPI
MS.gene88780	MS.gene046958	PPI
MS.gene046958	MS.gene016220	PPI
MS.gene87588	MS.gene046958	PPI
MS.gene71159	MS.gene046958	PPI
MS.gene96448	MS.gene046958	PPI
MS.gene77858	MS.gene046958	PPI
MS.gene041392	MS.gene046958	PPI
MS.gene58317	MS.gene046958	PPI
MS.gene046958	MS.gene58240	PPI
MS.gene069075	MS.gene046958	PPI
MS.gene033081	MS.gene046958	PPI
MS.gene046958	MS.gene27284	PPI
MS.gene046958	MS.gene57717	PPI
MS.gene046958	MS.gene034680	PPI
MS.gene031591	MS.gene046958	PPI
MS.gene046958	MS.gene48221	PPI
MS.gene035262	MS.gene046958	PPI
MS.gene046958	MS.gene50327	PPI
MS.gene046958	MS.gene066626	PPI
MS.gene51199	MS.gene046958	PPI
MS.gene062698	MS.gene046958	PPI
MS.gene57536	MS.gene046958	PPI
MS.gene046958	MS.gene063474	PPI
MS.gene96126	MS.gene046958	PPI
MS.gene019503	MS.gene046958	PPI
MS.gene046958	MS.gene51190	PPI
MS.gene046958	MS.gene58319	PPI
MS.gene046958	MS.gene044426	PPI
MS.gene046958	MS.gene034681	PPI
MS.gene016524	MS.gene046958	PPI
MS.gene87559	MS.gene046958	PPI
MS.gene50304	MS.gene046958	PPI
MS.gene046958	MS.gene57532	PPI
MS.gene046958	MS.gene033442	PPI
MS.gene59943	MS.gene046958	PPI
MS.gene046958	MS.gene009892	PPI
MS.gene31587	MS.gene046958	PPI
MS.gene041393	MS.gene046958	PPI
MS.gene033441	MS.gene046958	PPI
MS.gene046958	MS.gene44428	PPI
MS.gene046958	MS.gene058669	PPI
MS.gene046958	MS.gene066120	PPI
MS.gene063826	MS.gene046958	PPI
MS.gene046958	MS.gene035235	PPI
MS.gene060367	MS.gene046958	PPI
MS.gene046958	MS.gene041489	PPI
MS.gene44892	MS.gene046958	PPI
MS.gene046958	MS.gene024000	PPI
MS.gene046958	MS.gene034688	PPI
MS.gene58239	MS.gene046958	PPI
MS.gene066641	MS.gene046958	PPI
MS.gene046958	MS.gene24213	PPI
MS.gene000038	MS.gene046958	PPI
MS.gene57531	MS.gene046958	PPI
MS.gene064111	MS.gene046958	PPI
MS.gene046958	MS.gene033079	PPI
MS.gene046958	MS.gene034677	PPI
MS.gene046958	MS.gene055694	PPI
MS.gene046958	MS.gene059101	PPI
MS.gene39262	MS.gene046958	PPI
MS.gene046958	MS.gene035238	PPI
MS.gene053256	MS.gene046958	PPI
MS.gene025887	MS.gene046958	PPI
MS.gene046958	MS.gene064114	PPI
MS.gene75875	MS.gene046958	PPI
MS.gene046958	MS.gene87584	PPI
MS.gene041470	MS.gene046958	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene046958.t1	MTR_5g023000	92.929	99	7	0	44	142	1	99	1.74e-64	192
MS.gene046958.t1	MTR_4g109270	65.493	142	49	0	1	142	223	364	8.70e-63	196
MS.gene046958.t1	MTR_4g117870	68.421	133	40	2	10	142	137	267	4.23e-61	189
MS.gene046958.t1	MTR_3g103020	61.972	142	54	0	1	142	237	378	2.94e-58	185
MS.gene046958.t1	MTR_6g060650	62.411	141	51	1	1	141	234	372	8.91e-57	181
MS.gene046958.t1	MTR_4g116330	60.563	142	54	1	3	142	239	380	2.08e-54	175
MS.gene046958.t1	MTR_4g109280	62.500	144	49	3	1	142	219	359	1.18e-53	172
MS.gene046958.t1	MTR_8g040935	58.741	143	57	1	2	142	66	208	1.64e-53	167
MS.gene046958.t1	MTR_3g034180	62.411	141	50	2	1	141	351	488	7.11e-52	171
MS.gene046958.t1	MTR_3g034160	61.972	142	49	3	1	141	237	374	3.45e-48	159
MS.gene046958.t1	MTR_4g117720	57.823	147	54	3	2	142	234	378	3.53e-48	159
MS.gene046958.t1	MTR_4g116320	59.286	140	53	2	2	139	118	255	3.79e-48	155
MS.gene046958.t1	MTR_8g433040	59.286	140	54	2	3	142	228	364	6.23e-48	158
MS.gene046958.t1	MTR_8g032380	59.286	140	54	2	3	142	228	364	6.23e-48	158
MS.gene046958.t1	MTR_4g023130	57.447	141	57	2	1	141	175	312	1.44e-47	155
MS.gene046958.t1	MTR_4g117780	57.639	144	58	1	2	142	224	367	1.59e-47	157
MS.gene046958.t1	MTR_4g023090	51.948	154	58	3	2	141	232	383	4.26e-47	156
MS.gene046958.t1	MTR_4g023380	51.829	164	53	4	3	142	218	379	1.10e-46	155
MS.gene046958.t1	MTR_4g117770	57.639	144	58	1	2	142	224	367	3.31e-46	154
MS.gene046958.t1	MTR_4g117810	57.639	144	58	1	2	142	224	367	3.31e-46	154
MS.gene046958.t1	MTR_4g117850	56.835	139	58	2	2	139	239	376	3.69e-46	154
MS.gene046958.t1	MTR_4g094365	53.472	144	64	2	1	142	222	364	2.34e-45	151
MS.gene046958.t1	MTR_8g433030	57.246	138	55	3	1	137	203	337	2.78e-45	150
MS.gene046958.t1	MTR_4g023080	54.610	141	61	2	1	141	216	353	4.11e-45	150
MS.gene046958.t1	MTR_4g021785	54.930	142	61	2	1	142	217	355	4.34e-45	150
MS.gene046958.t1	MTR_8g032390	57.246	138	55	3	1	137	236	370	4.84e-45	150
MS.gene046958.t1	MTR_4g122850	54.225	142	61	4	3	142	225	364	1.05e-44	150
MS.gene046958.t1	MTR_3g034130	56.250	128	54	1	1	128	237	362	1.07e-44	150
MS.gene046958.t1	MTR_6g463430	55.319	141	57	2	3	142	67	202	3.24e-44	144
MS.gene046958.t1	MTR_5g097210	56.934	137	54	3	3	138	227	359	3.44e-44	149
MS.gene046958.t1	MTR_5g070130	54.545	143	63	2	2	142	235	377	9.24e-44	148
MS.gene046958.t1	MTR_4g023070	52.597	154	58	3	1	141	218	369	2.20e-43	146
MS.gene046958.t1	MTR_5g070080	55.944	143	61	2	1	142	245	386	7.52e-43	145
MS.gene046958.t1	MTR_4g118360	63.793	116	36	4	29	142	15	126	1.73e-42	137
MS.gene046958.t1	MTR_4g118380	58.197	122	40	2	1	113	236	355	4.17e-41	140
MS.gene046958.t1	MTR_4g023120	50.968	155	61	3	1	142	218	370	8.28e-41	140
MS.gene046958.t1	MTR_1g055195	52.778	144	62	5	1	142	339	478	1.26e-40	141
MS.gene046958.t1	MTR_1g055175	52.113	142	63	4	3	142	63	201	2.17e-40	134
MS.gene046958.t1	MTR_4g116330	63.063	111	39	1	34	142	231	341	3.13e-40	137
MS.gene046958.t1	MTR_1g055165	52.113	142	63	4	3	142	180	318	2.43e-39	135
MS.gene046958.t1	MTR_4g117750	56.923	130	48	1	19	140	352	481	3.51e-39	137
MS.gene046958.t1	MTR_4g117750	47.917	144	62	5	3	138	217	355	3.95e-29	110
MS.gene046958.t1	MTR_4g023190	53.425	146	58	5	1	140	216	357	1.65e-38	133
MS.gene046958.t1	MTR_4g118370	51.538	130	59	2	10	139	132	257	7.77e-37	127
MS.gene046958.t1	MTR_4g023200	52.740	146	59	5	1	140	217	358	9.63e-37	129
MS.gene046958.t1	MTR_1g055135	50.345	145	64	4	3	142	234	375	1.18e-36	129
MS.gene046958.t1	MTR_5g070088	50.000	144	70	2	1	142	243	386	1.65e-36	129
MS.gene046958.t1	MTR_4g023150	51.370	146	61	5	1	140	217	358	5.76e-36	127
MS.gene046958.t1	MTR_4g118400	50.000	136	54	2	1	136	173	294	3.21e-35	123
MS.gene046958.t1	MTR_4g023440	60.377	106	40	1	37	142	229	332	2.79e-34	122
MS.gene046958.t1	MTR_4g117530	58.000	100	39	1	43	142	157	253	3.22e-34	120
MS.gene046958.t1	MTR_4g122860	50.000	128	57	2	19	142	196	320	3.64e-34	122
MS.gene046958.t1	MTR_7g079450	46.853	143	69	4	1	142	1	137	2.68e-32	111
MS.gene046958.t1	MTR_1g055250	48.031	127	61	3	3	129	132	253	6.24e-32	115
MS.gene046958.t1	MTR_8g102520	44.138	145	74	4	1	142	182	322	1.15e-30	112
MS.gene046958.t1	MTR_7g079400	45.270	148	70	4	2	142	194	337	4.44e-30	111
MS.gene046958.t1	MTR_7g117720	63.218	87	28	2	55	137	186	272	4.96e-27	102
MS.gene046958.t1	MTR_8g098830	46.957	115	54	4	1	113	87	196	9.56e-24	92.4
MS.gene046958.t1	MTR_7g079370	44.203	138	71	4	1	136	217	350	4.07e-23	92.8
MS.gene046958.t1	MTR_4g121580	47.107	121	52	4	13	132	230	339	6.24e-23	92.8
MS.gene046958.t1	MTR_4g122840	40.441	136	45	3	8	142	164	264	8.88e-23	90.5
MS.gene046958.t1	MTR_4g114700	53.608	97	40	2	40	133	124	218	1.73e-22	89.4
MS.gene046958.t1	MTR_7g079420	39.041	146	79	5	2	142	1004	1144	2.31e-21	89.4
MS.gene046958.t1	MTR_4g023430	50.617	81	37	1	65	142	142	222	2.11e-19	80.9
MS.gene046958.t1	MTR_8g013005	61.017	59	23	0	84	142	1	59	5.73e-19	75.5
MS.gene046958.t1	MTR_2g048580	38.194	144	74	5	2	142	211	342	3.40e-18	79.3
MS.gene046958.t1	MTR_4g023100	57.143	56	22	1	86	141	65	118	1.10e-13	63.5
MS.gene046958.t1	MTR_4g109290	58.491	53	22	0	90	142	136	188	4.62e-13	63.5
MS.gene046958.t1	MTR_2g064960	58.140	43	18	0	100	142	17	59	6.38e-11	54.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 27 sgRNAs with CRISPR-Local

Find 33 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATTGTGATGTGTGGGTATT+TGG	0.202909	5.4:+258335	MS.gene046958:CDS
TTGGAGAATTTCTCAGTATA+TGG	0.237144	5.4:+258354	MS.gene046958:CDS
CTAATGATACACTTGAAATA+TGG	0.280671	5.4:+258390	MS.gene046958:CDS
GCTTCATAGTCAATATCAAT+TGG	0.392804	5.4:-258308	None:intergenic
TGGAGAATTTCTCAGTATAT+GGG	0.404173	5.4:+258355	MS.gene046958:CDS
TGCCTTTGATTTAATCAAAA+GGG	0.415367	5.4:+258265	MS.gene046958:CDS
TTGCCTTTGATTTAATCAAA+AGG	0.422457	5.4:+258264	MS.gene046958:CDS
AACAGAAGATGGATGGAAAT+TGG	0.423122	5.4:+258532	MS.gene046958:CDS
GGTGACAGTGACCAAGCTTA+AGG	0.452041	5.4:+258659	MS.gene046958:CDS
GAGTCTCTGCTTTCACTCCC+TGG	0.452167	5.4:+258638	MS.gene046958:CDS
AATACAAAGTGCATTCCTCT+TGG	0.461402	5.4:+258423	MS.gene046958:CDS
ATTTCTCAGTATATGGGCTA+TGG	0.479112	5.4:+258361	MS.gene046958:CDS
GATATCATTGGAACAGAAGA+TGG	0.479823	5.4:+258521	MS.gene046958:CDS
TATTGGGGAAAACAGCTTAG+TGG	0.491914	5.4:-258480	None:intergenic
TTGTGTCATCTCCTTAAGCT+TGG	0.494818	5.4:-258670	None:intergenic
TAATGATACACTTGAAATAT+GGG	0.496908	5.4:+258391	MS.gene046958:CDS
CTTCATAGTCAATATCAATT+GGG	0.498545	5.4:-258307	None:intergenic
TAAGCTTGGTCACTGTCACC+AGG	0.500905	5.4:-258656	None:intergenic
CTCTGTATAAAGAGCCACTT+CGG	0.548132	5.4:-258618	None:intergenic
TCATTGGAACAGAAGATGGA+TGG	0.571754	5.4:+258525	MS.gene046958:CDS
TACTATTCTGACAGTACACA+TGG	0.588984	5.4:+258593	MS.gene046958:CDS
AAGCTTGGTCACTGTCACCA+GGG	0.590911	5.4:-258655	None:intergenic
AGCTACAAATTGTGATGTGT+GGG	0.604681	5.4:+258328	MS.gene046958:CDS
AAGCTACAAATTGTGATGTG+TGG	0.622283	5.4:+258327	MS.gene046958:CDS
TTGGTGAAGTATAATGACAA+AGG	0.632256	5.4:+258551	MS.gene046958:CDS
ACAAAGGACAGTTGATAGAG+TGG	0.633105	5.4:+258567	MS.gene046958:CDS
CAGTACACATGGAACCGAAG+TGG	0.667775	5.4:+258604	MS.gene046958:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATGATACACTTGAAATAT+GGG	+	chr5.4:258391-258410	MS.gene046958:CDS	20.0%
!	CTAATGATACACTTGAAATA+TGG	+	chr5.4:258390-258409	MS.gene046958:CDS	25.0%
!	CTTCATAGTCAATATCAATT+GGG	-	chr5.4:258310-258329	None:intergenic	25.0%
!!	ACTTTTTGTAGAACATATTG+GGG	-	chr5.4:258498-258517	None:intergenic	25.0%
!!	TGCCTTTGATTTAATCAAAA+GGG	+	chr5.4:258265-258284	MS.gene046958:CDS	25.0%
!!	TTGCCTTTGATTTAATCAAA+AGG	+	chr5.4:258264-258283	MS.gene046958:CDS	25.0%
!!!	CACTTTTTGTAGAACATATT+GGG	-	chr5.4:258499-258518	None:intergenic	25.0%
!!!	TTCCCTTTTGATTAAATCAA+AGG	-	chr5.4:258270-258289	None:intergenic	25.0%
	ACAAAAAGTGGTGATATCAT+TGG	+	chr5.4:258509-258528	MS.gene046958:CDS	30.0%
	CCAATATGTTCTACAAAAAG+TGG	+	chr5.4:258497-258516	MS.gene046958:CDS	30.0%
	GCTTCATAGTCAATATCAAT+TGG	-	chr5.4:258311-258330	None:intergenic	30.0%
	TGGAGAATTTCTCAGTATAT+GGG	+	chr5.4:258355-258374	MS.gene046958:CDS	30.0%
	TTGGAGAATTTCTCAGTATA+TGG	+	chr5.4:258354-258373	MS.gene046958:CDS	30.0%
	TTGGTGAAGTATAATGACAA+AGG	+	chr5.4:258551-258570	MS.gene046958:CDS	30.0%
!!!	ACTCTTGTTTTGTCTATTGA+CGG	+	chr5.4:258452-258471	MS.gene046958:CDS	30.0%
!!!	CCACTTTTTGTAGAACATAT+TGG	-	chr5.4:258500-258519	None:intergenic	30.0%
	AACAGAAGATGGATGGAAAT+TGG	+	chr5.4:258532-258551	MS.gene046958:CDS	35.0%
	AAGCTACAAATTGTGATGTG+TGG	+	chr5.4:258327-258346	MS.gene046958:CDS	35.0%
	AATACAAAGTGCATTCCTCT+TGG	+	chr5.4:258423-258442	MS.gene046958:CDS	35.0%
	AATTGTGATGTGTGGGTATT+TGG	+	chr5.4:258335-258354	MS.gene046958:CDS	35.0%
	AGCTACAAATTGTGATGTGT+GGG	+	chr5.4:258328-258347	MS.gene046958:CDS	35.0%
	GATATCATTGGAACAGAAGA+TGG	+	chr5.4:258521-258540	MS.gene046958:CDS	35.0%
	TACTATTCTGACAGTACACA+TGG	+	chr5.4:258593-258612	MS.gene046958:CDS	35.0%
!	AACAAGAGTTTTTGTCCAAG+AGG	-	chr5.4:258441-258460	None:intergenic	35.0%
!	ATTTCTCAGTATATGGGCTA+TGG	+	chr5.4:258361-258380	MS.gene046958:CDS	35.0%
	CTCTGTATAAAGAGCCACTT+CGG	-	chr5.4:258621-258640	None:intergenic	40.0%
	TATTGGGGAAAACAGCTTAG+TGG	-	chr5.4:258483-258502	None:intergenic	40.0%
	TCATTGGAACAGAAGATGGA+TGG	+	chr5.4:258525-258544	MS.gene046958:CDS	40.0%
!!	ACAAAGGACAGTTGATAGAG+TGG	+	chr5.4:258567-258586	MS.gene046958:CDS	40.0%
	AAGCTTGGTCACTGTCACCA+GGG	-	chr5.4:258658-258677	None:intergenic	50.0%
	CAGTACACATGGAACCGAAG+TGG	+	chr5.4:258604-258623	MS.gene046958:CDS	50.0%
	TAAGCTTGGTCACTGTCACC+AGG	-	chr5.4:258659-258678	None:intergenic	50.0%
	GAGTCTCTGCTTTCACTCCC+TGG	+	chr5.4:258638-258657	MS.gene046958:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	258251	258679	258251	ID=MS.gene046958
chr5.4	mRNA	258251	258679	258251	ID=MS.gene046958.t1;Parent=MS.gene046958
chr5.4	exon	258251	258679	258251	ID=MS.gene046958.t1.exon1;Parent=MS.gene046958.t1
chr5.4	CDS	258251	258679	258251	ID=cds.MS.gene046958.t1;Parent=MS.gene046958.t1

Gene Sequence

>MS.gene046958

ATGGATCTTATTCTTGCCTTTGATTTAATCAAAAGGGAACTTTTTGAGATTCATCTCCCAATTGATATTGACTATGAAGCTACAAATTGTGATGTGTGGGTATTTGGAGAATTTCTCAGTATATGGGCTATGGATTATGCTAATGATACACTTGAAATATGGGTGATGAAAGAATACAAAGTGCATTCCTCTTGGACAAAAACTCTTGTTTTGTCTATTGACGGCATTTCCACTAAGCTGTTTTCCCCAATATGTTCTACAAAAAGTGGTGATATCATTGGAACAGAAGATGGATGGAAATTGGTGAAGTATAATGACAAAGGACAGTTGATAGAGTGGCACTACTATTCTGACAGTACACATGGAACCGAAGTGGCTCTTTATACAGAGTCTCTGCTTTCACTCCCTGGTGACAGTGACCAAGCTTAA

Protein sequence

>MS.gene046958.t1

MDLILAFDLIKRELFEIHLPIDIDYEATNCDVWVFGEFLSIWAMDYANDTLEIWVMKEYKVHSSWTKTLVLSIDGISTKLFSPICSTKSGDIIGTEDGWKLVKYNDKGQLIEWHYYSDSTHGTEVALYTESLLSLPGDSDQA