AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064104


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064104.t1 MTR_4g023150 86.885 366 40 1 1 366 1 358 0.0 617
MS.gene064104.t1 MTR_4g023190 85.792 366 43 1 1 366 1 357 0.0 608
MS.gene064104.t1 MTR_4g023200 85.246 366 46 1 1 366 1 358 0.0 596
MS.gene064104.t1 MTR_4g023080 63.836 365 117 6 3 366 2 352 1.91e-155 441
MS.gene064104.t1 MTR_4g021785 63.760 367 115 6 3 366 2 353 1.96e-154 439
MS.gene064104.t1 MTR_4g023090 60.000 385 124 8 2 366 8 382 2.25e-150 429
MS.gene064104.t1 MTR_4g023120 59.151 377 123 6 10 366 3 368 6.67e-144 412
MS.gene064104.t1 MTR_4g023070 58.886 377 124 6 10 366 3 368 3.93e-143 410
MS.gene064104.t1 MTR_4g023380 57.252 393 117 10 2 366 8 377 7.69e-133 385
MS.gene064104.t1 MTR_4g023130 56.438 365 103 7 3 366 2 311 6.13e-128 370
MS.gene064104.t1 MTR_3g103020 54.642 377 143 11 4 366 14 376 2.65e-123 360
MS.gene064104.t1 MTR_4g023440 55.851 376 103 10 2 366 7 330 9.84e-123 357
MS.gene064104.t1 MTR_3g034180 54.427 384 143 11 3 366 116 487 9.80e-122 360
MS.gene064104.t1 MTR_3g034160 53.665 382 147 12 3 365 2 372 6.30e-114 336
MS.gene064104.t1 MTR_4g109270 53.581 377 149 11 1 366 1 362 3.72e-112 332
MS.gene064104.t1 MTR_4g094365 52.116 378 153 11 1 366 1 362 3.89e-112 331
MS.gene064104.t1 MTR_4g122850 53.699 365 136 15 21 366 12 362 6.30e-110 326
MS.gene064104.t1 MTR_3g034130 52.732 366 140 11 3 348 2 354 2.24e-108 322
MS.gene064104.t1 MTR_4g116330 51.724 377 155 10 2 365 15 377 2.43e-108 322
MS.gene064104.t1 MTR_4g117770 52.128 376 159 10 1 366 1 365 1.35e-107 320
MS.gene064104.t1 MTR_4g117810 52.128 376 159 10 1 366 1 365 1.35e-107 320
MS.gene064104.t1 MTR_4g109280 51.337 374 153 10 4 366 2 357 2.50e-107 319
MS.gene064104.t1 MTR_5g070130 49.867 377 167 12 4 365 5 374 1.65e-102 308
MS.gene064104.t1 MTR_4g117850 51.206 373 148 13 9 365 22 376 1.84e-101 305
MS.gene064104.t1 MTR_4g117780 50.532 376 165 11 1 366 1 365 1.59e-99 299
MS.gene064104.t1 MTR_8g433040 49.474 380 152 12 1 366 9 362 4.81e-99 298
MS.gene064104.t1 MTR_8g032380 49.474 380 152 12 1 366 9 362 4.81e-99 298
MS.gene064104.t1 MTR_6g060650 52.185 389 145 15 1 366 1 371 5.24e-98 296
MS.gene064104.t1 MTR_5g070088 45.038 393 174 10 5 366 2 383 7.78e-98 296
MS.gene064104.t1 MTR_5g097210 49.211 380 153 13 3 364 2 359 1.24e-95 290
MS.gene064104.t1 MTR_5g070080 45.939 394 172 11 1 365 1 382 2.03e-94 287
MS.gene064104.t1 MTR_1g055135 46.825 378 165 13 9 366 12 373 3.48e-94 286
MS.gene064104.t1 MTR_4g117750 50.928 377 143 14 8 364 1 355 7.74e-92 283
MS.gene064104.t1 MTR_4g117750 53.571 112 46 4 258 366 373 481 1.55e-24 104
MS.gene064104.t1 MTR_8g032390 46.277 376 153 10 1 363 31 370 1.85e-91 279
MS.gene064104.t1 MTR_4g118380 49.866 373 141 13 1 343 1 357 6.31e-91 277
MS.gene064104.t1 MTR_4g117720 46.354 384 137 13 1 365 42 375 4.19e-89 273
MS.gene064104.t1 MTR_4g116330 46.419 377 136 10 2 365 15 338 3.94e-88 269
MS.gene064104.t1 MTR_8g433030 43.432 373 135 9 1 363 31 337 3.45e-81 251
MS.gene064104.t1 MTR_1g055165 43.836 365 141 11 9 366 9 316 1.65e-80 249
MS.gene064104.t1 MTR_8g013010 50.186 269 110 6 4 261 48 303 1.04e-76 239
MS.gene064104.t1 MTR_4g121580 43.947 380 150 18 1 358 1 339 7.18e-68 219
MS.gene064104.t1 MTR_4g117870 44.518 301 110 9 74 364 10 263 4.71e-67 213
MS.gene064104.t1 MTR_1g055195 43.421 304 156 8 67 365 183 475 1.67e-65 215
MS.gene064104.t1 MTR_4g116320 54.626 227 76 7 152 365 43 255 2.00e-65 208
MS.gene064104.t1 MTR_4g118400 43.403 288 116 11 87 362 42 294 1.05e-58 192
MS.gene064104.t1 MTR_2g048580 38.147 367 189 15 4 363 2 337 2.53e-56 187
MS.gene064104.t1 MTR_7g079370 42.286 350 161 17 39 362 16 350 1.24e-55 186
MS.gene064104.t1 MTR_7g117720 50.943 212 68 7 1 197 1 191 2.17e-52 175
MS.gene064104.t1 MTR_7g117720 45.690 116 56 3 253 363 159 272 1.19e-17 82.4
MS.gene064104.t1 MTR_4g118370 45.525 257 95 12 121 365 34 257 4.99e-51 171
MS.gene064104.t1 MTR_8g040935 47.867 211 94 6 162 366 6 206 8.80e-50 166
MS.gene064104.t1 MTR_7g079400 41.034 290 142 11 93 366 59 335 1.94e-49 169
MS.gene064104.t1 MTR_6g463430 50.732 205 81 7 166 366 12 200 9.67e-49 163
MS.gene064104.t1 MTR_4g116340 45.082 244 96 7 3 231 27 247 6.27e-48 162
MS.gene064104.t1 MTR_8g102520 35.789 380 170 15 1 366 1 320 6.43e-46 160
MS.gene064104.t1 MTR_4g117530 41.700 247 97 7 125 366 47 251 6.87e-41 144
MS.gene064104.t1 MTR_1g055175 43.128 211 104 9 160 366 1 199 1.80e-39 139
MS.gene064104.t1 MTR_4g114700 37.828 267 94 8 108 359 9 218 3.73e-39 139
MS.gene064104.t1 MTR_4g117430 53.061 147 59 4 121 267 16 152 7.83e-38 133
MS.gene064104.t1 MTR_1g055250 39.352 216 113 8 147 355 49 253 1.12e-37 138
MS.gene064104.t1 MTR_5g022420 30.595 353 196 17 5 336 22 346 2.17e-34 130
MS.gene064104.t1 MTR_1g097490 32.162 370 204 17 10 360 49 390 1.79e-33 128
MS.gene064104.t1 MTR_1g097560 30.137 365 214 14 10 360 36 373 4.43e-33 127
MS.gene064104.t1 MTR_1g097330 31.742 356 197 16 5 338 11 342 1.01e-32 127
MS.gene064104.t1 MTR_7g079420 36.900 271 119 10 107 362 905 1138 2.01e-32 129
MS.gene064104.t1 MTR_4g023430 66.304 92 31 0 1 92 32 123 6.73e-32 120
MS.gene064104.t1 MTR_4g023430 47.967 123 42 5 252 366 112 220 2.14e-20 89.0
MS.gene064104.t1 MTR_2g021150 32.239 335 193 17 7 322 11 330 1.49e-30 120
MS.gene064104.t1 MTR_2g047832 29.775 356 211 16 9 334 28 374 2.50e-30 120
MS.gene064104.t1 MTR_2g055970 27.487 382 228 16 3 360 204 560 2.79e-30 122
MS.gene064104.t1 MTR_8g101580 27.733 375 238 12 2 360 37 394 3.17e-30 119
MS.gene064104.t1 MTR_3g014540 31.105 344 189 14 10 333 29 344 1.28e-29 117
MS.gene064104.t1 MTR_5g057790 31.965 341 198 16 10 334 46 368 1.70e-29 117
MS.gene064104.t1 MTR_3g013740 30.130 385 213 18 10 360 44 406 3.23e-29 117
MS.gene064104.t1 MTR_5g057710 30.925 346 196 16 10 334 46 369 4.66e-29 116
MS.gene064104.t1 MTR_2g046920 27.616 344 214 12 9 334 23 349 1.37e-28 114
MS.gene064104.t1 MTR_1g094210 30.925 346 197 14 10 339 57 376 3.20e-28 114
MS.gene064104.t1 MTR_4g107820 29.355 310 175 11 10 300 36 320 3.39e-28 114
MS.gene064104.t1 MTR_4g107780 29.355 310 175 11 10 300 36 320 3.39e-28 114
MS.gene064104.t1 MTR_4g107820 29.355 310 175 11 10 300 36 320 4.30e-28 114
MS.gene064104.t1 MTR_4g107780 29.355 310 175 11 10 300 36 320 4.34e-28 114
MS.gene064104.t1 MTR_3g014570 29.412 374 217 14 10 360 29 378 6.15e-28 113
MS.gene064104.t1 MTR_4g122860 40.196 204 66 9 176 366 158 318 7.01e-28 112
MS.gene064104.t1 MTR_1g094210 30.163 368 214 15 10 360 57 398 7.27e-28 113
MS.gene064104.t1 MTR_5g023000 61.702 94 32 3 275 366 6 97 1.11e-27 105
MS.gene064104.t1 MTR_3g009310 32.268 313 173 14 4 298 36 327 5.08e-27 110
MS.gene064104.t1 MTR_4g109290 41.718 163 60 3 3 161 2 133 5.70e-27 105
MS.gene064104.t1 MTR_6g065980 28.610 367 222 15 10 360 16 358 1.05e-26 109
MS.gene064104.t1 MTR_5g057690 31.686 344 185 18 10 334 46 358 3.65e-26 108
MS.gene064104.t1 MTR_5g069120 42.222 180 80 8 20 178 1 177 4.08e-26 103
MS.gene064104.t1 MTR_8g467140 29.431 299 191 9 4 293 26 313 4.39e-26 107
MS.gene064104.t1 MTR_4g118360 55.752 113 38 6 258 365 18 123 1.20e-25 100
MS.gene064104.t1 MTR_2g046830 28.144 334 203 14 9 323 24 339 1.37e-25 107
MS.gene064104.t1 MTR_7g407070 27.532 385 233 12 7 360 29 398 2.00e-25 106
MS.gene064104.t1 MTR_2g046900 27.221 349 217 14 9 334 27 361 3.80e-25 105
MS.gene064104.t1 MTR_5g057020 29.967 307 181 13 10 309 46 325 5.00e-25 104
MS.gene064104.t1 MTR_4g133170 27.089 347 206 14 10 333 4 326 6.72e-25 104
MS.gene064104.t1 MTR_4g108820 29.003 331 156 13 9 318 41 313 2.03e-24 102
MS.gene064104.t1 MTR_3g036290 29.971 347 205 15 10 344 22 342 2.58e-24 102
MS.gene064104.t1 MTR_3g010390 28.191 376 209 13 10 346 33 386 4.08e-24 102
MS.gene064104.t1 MTR_5g011200 28.571 315 164 16 10 293 17 301 8.36e-24 101
MS.gene064104.t1 MTR_3g013770 28.721 383 221 14 6 360 29 387 9.28e-24 101
MS.gene064104.t1 MTR_3g006670 27.990 393 219 16 5 360 44 409 1.26e-23 101
MS.gene064104.t1 MTR_1g050542 26.087 368 234 13 10 360 58 404 1.34e-23 101
MS.gene064104.t1 MTR_3g072470 27.926 376 197 15 13 336 22 375 1.64e-23 101
MS.gene064104.t1 MTR_3g007330 30.323 310 166 14 10 298 48 328 1.79e-23 100
MS.gene064104.t1 MTR_2g021190 27.035 344 207 12 10 335 21 338 2.51e-23 100
MS.gene064104.t1 MTR_3g007360 29.134 381 206 17 13 361 55 403 2.52e-23 100
MS.gene064104.t1 MTR_6g053260 31.013 316 170 15 2 293 329 620 2.94e-23 101
MS.gene064104.t1 MTR_0044s0300 26.984 378 223 17 10 360 38 389 3.71e-23 99.8
MS.gene064104.t1 MTR_3g007410 29.396 381 205 17 13 361 55 403 4.60e-23 99.8
MS.gene064104.t1 MTR_7g062100 27.708 397 217 12 10 360 24 396 5.48e-23 99.4
MS.gene064104.t1 MTR_4g055060 29.114 316 182 12 6 298 26 322 8.79e-23 99.0
MS.gene064104.t1 MTR_4g037465 29.793 386 196 20 10 347 21 379 1.27e-22 98.6
MS.gene064104.t1 MTR_6g021880 27.882 373 214 15 21 360 31 381 1.80e-22 97.8
MS.gene064104.t1 MTR_4g061340 28.889 315 174 12 10 298 26 316 2.03e-22 97.4
MS.gene064104.t1 MTR_5g046300 28.457 376 215 20 10 360 4 350 2.59e-22 97.1
MS.gene064104.t1 MTR_5g046290 28.457 376 215 20 10 360 4 350 2.59e-22 97.1
MS.gene064104.t1 MTR_2g021252 27.869 366 217 16 13 361 50 385 2.79e-22 97.4
MS.gene064104.t1 MTR_0128s0020 26.289 388 218 14 8 354 16 376 3.76e-22 97.1
MS.gene064104.t1 MTR_3g036430 27.034 381 198 14 6 360 16 342 4.16e-22 96.3
MS.gene064104.t1 MTR_4g030830 26.685 371 209 14 1 325 1 354 4.39e-22 97.1
MS.gene064104.t1 MTR_7g070880 27.568 370 196 13 10 321 21 376 5.34e-22 97.1
MS.gene064104.t1 MTR_8g073550 36.000 200 105 7 7 189 27 220 5.82e-22 93.6
MS.gene064104.t1 MTR_2g078900 31.475 305 166 17 7 293 30 309 6.16e-22 95.9
MS.gene064104.t1 MTR_2g029990 28.610 374 220 19 11 360 52 402 7.72e-22 96.3
MS.gene064104.t1 MTR_6g034720 39.881 168 64 7 131 278 53 203 8.07e-22 92.8
MS.gene064104.t1 MTR_3g011060 27.415 383 220 16 10 359 28 385 1.62e-21 95.1
MS.gene064104.t1 MTR_2g021155 26.923 364 196 14 4 332 30 358 1.65e-21 96.7
MS.gene064104.t1 MTR_6g053240 28.076 317 167 14 10 293 28 316 2.00e-21 95.1
MS.gene064104.t1 MTR_3g009260 28.611 360 210 15 13 357 44 371 2.86e-21 94.4
MS.gene064104.t1 MTR_3g083640 26.667 375 230 16 7 360 52 402 2.90e-21 94.7
MS.gene064104.t1 MTR_7g066840 25.964 389 246 14 8 363 21 400 4.90e-21 94.0
MS.gene064104.t1 MTR_7g070830 27.322 366 202 12 10 321 21 376 6.46e-21 93.6
MS.gene064104.t1 MTR_0707s0020 26.697 442 219 22 7 362 23 445 7.45e-21 94.0
MS.gene064104.t1 MTR_2g024110 26.452 310 178 11 10 293 4 289 8.11e-21 92.8
MS.gene064104.t1 MTR_3g009240 27.614 373 204 14 10 356 36 368 1.08e-20 92.8
MS.gene064104.t1 MTR_6g027910 27.792 403 210 19 6 360 5 374 1.40e-20 92.4
MS.gene064104.t1 MTR_5g069760 27.763 389 224 18 8 361 4 370 1.44e-20 92.0
MS.gene064104.t1 MTR_3g030250 28.032 371 219 16 10 360 37 379 1.46e-20 92.4
MS.gene064104.t1 MTR_3g011020 27.062 388 209 19 5 359 23 369 1.62e-20 92.0
MS.gene064104.t1 MTR_5g057643 33.047 233 136 8 10 231 46 269 1.64e-20 90.5
MS.gene064104.t1 MTR_1g055145 48.696 115 48 4 1 106 18 130 1.67e-20 90.5
MS.gene064104.t1 MTR_1g055145 41.176 85 46 2 200 284 122 202 2.58e-11 63.9
MS.gene064104.t1 MTR_2g031720 25.000 380 248 12 10 366 6 371 1.79e-20 92.0
MS.gene064104.t1 MTR_3g023930 26.316 380 221 16 2 360 26 367 2.00e-20 91.7
MS.gene064104.t1 MTR_2g021800 24.878 410 239 13 9 361 15 412 2.65e-20 92.0
MS.gene064104.t1 MTR_3g007270 28.075 374 204 19 6 340 43 390 2.81e-20 91.7
MS.gene064104.t1 MTR_7g055977 28.431 408 209 21 7 361 4 381 3.26e-20 91.3
MS.gene064104.t1 MTR_3g036335 26.923 390 220 20 5 360 36 394 3.51e-20 91.3
MS.gene064104.t1 MTR_4g013180 25.526 380 221 13 6 340 7 369 5.13e-20 91.7
MS.gene064104.t1 MTR_3g010870 29.180 305 165 14 10 293 37 311 5.15e-20 90.9
MS.gene064104.t1 MTR_2g104340 25.672 409 245 11 1 366 5 397 5.15e-20 90.9
MS.gene064104.t1 MTR_8g098830 35.176 199 115 7 165 362 30 215 5.37e-20 88.2
MS.gene064104.t1 MTR_7g079640 27.297 381 223 16 4 354 7 363 6.08e-20 90.5
MS.gene064104.t1 MTR_3g436150 26.509 381 230 12 10 360 32 392 7.45e-20 90.5
MS.gene064104.t1 MTR_2g021950 24.433 397 252 13 2 361 8 393 8.30e-20 90.1
MS.gene064104.t1 MTR_3g011100 28.244 393 220 16 7 360 232 601 1.23e-19 90.9
MS.gene064104.t1 MTR_6g086920 25.551 454 223 21 7 362 35 471 1.35e-19 90.5
MS.gene064104.t1 MTR_5g069390 24.880 418 238 17 4 365 20 417 1.46e-19 90.1
MS.gene064104.t1 MTR_3g007430 27.027 333 197 15 13 325 46 352 1.48e-19 89.4
MS.gene064104.t1 MTR_7g056760 25.758 396 239 16 8 360 21 404 1.59e-19 89.7
MS.gene064104.t1 MTR_5g069930 26.184 359 203 16 6 324 2 338 1.88e-19 89.0
MS.gene064104.t1 MTR_0097s0030 27.348 362 216 15 8 340 12 355 2.16e-19 89.0
MS.gene064104.t1 MTR_2g047240 27.348 362 216 15 8 340 12 355 2.16e-19 89.0
MS.gene064104.t1 MTR_7g007300 28.289 304 178 13 8 297 101 378 2.20e-19 89.4
MS.gene064104.t1 MTR_0115s0020 25.359 418 232 18 1 361 1 395 2.36e-19 89.0
MS.gene064104.t1 MTR_7g069550 25.547 411 228 18 1 357 5 391 2.58e-19 89.0
MS.gene064104.t1 MTR_4g024890 25.123 406 236 18 1 360 1 384 3.18e-19 88.6
MS.gene064104.t1 MTR_7g028660 27.190 331 177 13 8 298 9 315 3.43e-19 88.2
MS.gene064104.t1 MTR_3g030240 25.745 369 225 13 10 360 40 377 3.50e-19 88.2
MS.gene064104.t1 MTR_7g056290 27.083 384 192 19 13 337 25 379 3.58e-19 88.6
MS.gene064104.t1 MTR_2g028130 27.195 353 200 14 10 321 5 341 3.80e-19 88.6
MS.gene064104.t1 MTR_4g129190 25.496 353 216 13 10 324 6 349 4.19e-19 88.2
MS.gene064104.t1 MTR_3g006570 26.448 397 217 18 4 360 15 376 5.06e-19 87.8
MS.gene064104.t1 MTR_3g010430 26.913 379 197 18 4 340 30 370 5.16e-19 88.2
MS.gene064104.t1 MTR_7g061060 27.848 316 192 11 8 298 11 315 5.31e-19 87.8
MS.gene064104.t1 MTR_7g061050 27.794 349 208 12 8 325 11 346 7.42e-19 87.4
MS.gene064104.t1 MTR_7g445890 27.507 349 196 14 8 321 14 340 8.41e-19 87.4
MS.gene064104.t1 MTR_6g016285 25.776 419 229 16 6 360 17 417 1.02e-18 87.4
MS.gene064104.t1 MTR_7g078860 26.630 368 211 13 5 330 4 354 1.08e-18 87.0
MS.gene064104.t1 MTR_5g057040 33.871 186 109 6 10 183 46 229 1.30e-18 88.2
MS.gene064104.t1 MTR_5g046260 27.575 301 162 15 10 302 4 256 1.60e-18 85.5
MS.gene064104.t1 MTR_7g055930 27.621 391 211 17 1 327 6 388 1.68e-18 86.7
MS.gene064104.t1 MTR_1g054725 29.967 307 178 12 7 293 17 306 1.72e-18 86.3
MS.gene064104.t1 MTR_7g066850 25.189 397 246 14 8 363 21 407 2.11e-18 86.7
MS.gene064104.t1 MTR_7g070440 25.000 356 202 12 8 324 5 334 2.41e-18 85.9
MS.gene064104.t1 MTR_7g060940 24.874 398 228 13 8 359 20 392 2.44e-18 85.9
MS.gene064104.t1 MTR_5g072060 28.022 364 207 16 9 340 5 345 2.79e-18 86.7
MS.gene064104.t1 MTR_2g021770 26.730 419 235 17 3 365 5 407 2.81e-18 85.9
MS.gene064104.t1 MTR_3g010590 27.660 376 224 18 7 360 36 385 3.57e-18 85.5
MS.gene064104.t1 MTR_0464s0020 25.935 428 226 18 6 360 19 428 3.59e-18 85.9
MS.gene064104.t1 MTR_7g013590 29.870 308 163 12 13 293 39 320 3.67e-18 85.5
MS.gene064104.t1 MTR_5g059430 24.480 433 226 18 4 363 20 424 4.90e-18 85.5
MS.gene064104.t1 MTR_7g079450 41.379 145 72 6 225 366 1 135 4.93e-18 80.1
MS.gene064104.t1 MTR_1g054575 27.469 324 197 15 10 316 52 354 5.26e-18 85.9
MS.gene064104.t1 MTR_3g011650 32.735 223 117 9 13 221 82 285 5.81e-18 83.6
MS.gene064104.t1 MTR_2g461450 27.222 360 215 13 6 340 14 351 7.43e-18 84.3
MS.gene064104.t1 MTR_7g056170 24.324 407 206 13 1 340 66 437 8.17e-18 84.7
MS.gene064104.t1 MTR_1g055070 27.839 273 159 10 2 245 41 304 8.82e-18 84.3
MS.gene064104.t1 MTR_6g048120 26.912 353 211 16 10 338 36 365 1.05e-17 84.3
MS.gene064104.t1 MTR_7g066000 27.864 323 189 13 8 298 23 333 1.05e-17 84.3
MS.gene064104.t1 MTR_2g022000 23.971 413 230 14 9 357 15 407 1.15e-17 84.3
MS.gene064104.t1 MTR_0128s0070 25.641 390 238 15 8 359 20 395 1.17e-17 84.0
MS.gene064104.t1 MTR_1g058190 25.949 316 168 11 6 297 31 304 1.29e-17 83.6
MS.gene064104.t1 MTR_1g068875 24.501 351 219 14 10 337 4 331 1.34e-17 83.6
MS.gene064104.t1 MTR_6g090180 24.515 412 239 14 4 361 41 434 1.36e-17 84.0
MS.gene064104.t1 MTR_7g055870 25.926 405 200 17 1 327 6 388 1.39e-17 84.0
MS.gene064104.t1 MTR_2g006360 29.508 305 152 14 7 302 44 294 1.52e-17 83.2
MS.gene064104.t1 MTR_7g016930 27.950 322 177 12 3 294 9 305 1.74e-17 82.8
MS.gene064104.t1 MTR_3g009250 32.579 221 117 9 13 220 44 245 1.80e-17 81.3
MS.gene064104.t1 MTR_1g114700 26.571 350 204 15 7 332 26 346 1.90e-17 83.2
MS.gene064104.t1 MTR_6g004660 29.073 313 185 10 10 298 16 315 2.16e-17 83.2
MS.gene064104.t1 MTR_3g007300 29.487 312 152 17 10 305 49 308 2.19e-17 82.8
MS.gene064104.t1 MTR_0760s0010 28.621 290 175 10 15 294 52 319 2.53e-17 82.8
MS.gene064104.t1 MTR_0649s0020 24.675 385 248 15 10 360 11 387 2.60e-17 82.8
MS.gene064104.t1 MTR_3g010870 30.544 239 123 10 10 229 37 251 3.07e-17 82.0
MS.gene064104.t1 MTR_3g006500 27.436 390 219 18 4 360 11 369 3.23e-17 82.4
MS.gene064104.t1 MTR_2g028160 26.184 359 213 15 10 329 5 350 3.29e-17 82.8
MS.gene064104.t1 MTR_7g066100 27.052 329 191 16 8 298 9 326 3.32e-17 82.8
MS.gene064104.t1 MTR_7g017040 26.603 421 224 21 2 366 8 399 4.14e-17 82.4
MS.gene064104.t1 MTR_3g464500 25.691 362 207 13 6 325 23 364 4.22e-17 82.4
MS.gene064104.t1 MTR_7g055987 28.080 349 166 17 13 315 23 332 4.33e-17 82.0
MS.gene064104.t1 MTR_2g025420 24.691 405 233 17 10 360 6 392 5.33e-17 82.4
MS.gene064104.t1 MTR_3g010520 25.393 382 219 17 4 360 19 359 5.46e-17 81.6
MS.gene064104.t1 MTR_2g425980 25.500 400 233 16 10 365 5 383 6.08e-17 82.0
MS.gene064104.t1 MTR_5g008530 61.538 65 23 1 3 67 11 73 6.61e-17 75.1
MS.gene064104.t1 MTR_4g030980 24.936 393 200 12 10 325 15 389 8.44e-17 81.6
MS.gene064104.t1 MTR_2g047200 24.934 377 223 15 8 343 18 375 9.20e-17 81.3
MS.gene064104.t1 MTR_5g007610 27.812 320 187 13 5 298 36 337 9.38e-17 81.3
MS.gene064104.t1 MTR_6g080680 24.755 408 239 16 1 359 1 389 9.85e-17 81.3
MS.gene064104.t1 MTR_3g464470 25.967 362 203 13 6 325 3 341 1.01e-16 81.3
MS.gene064104.t1 MTR_8g039500 25.496 353 216 13 4 328 6 339 1.02e-16 80.9
MS.gene064104.t1 MTR_3g010620 27.946 297 164 13 13 293 39 301 1.33e-16 80.9
MS.gene064104.t1 MTR_3g023940 26.735 389 208 17 10 360 34 383 1.35e-16 80.9
MS.gene064104.t1 MTR_3g010920 27.778 378 206 21 10 360 44 381 1.45e-16 80.5
MS.gene064104.t1 MTR_7g056200 26.076 395 216 15 8 360 21 381 1.47e-16 80.5
MS.gene064104.t1 MTR_4g028510 24.634 410 244 15 2 363 8 400 1.59e-16 80.9
MS.gene064104.t1 MTR_2g021210 27.003 337 212 13 10 335 84 397 1.84e-16 80.5
MS.gene064104.t1 MTR_5g096710 26.382 398 228 15 8 360 21 398 2.32e-16 80.1
MS.gene064104.t1 MTR_3g010970 26.133 375 216 17 13 360 51 391 2.41e-16 80.1
MS.gene064104.t1 MTR_3g024110 27.119 295 182 12 10 293 101 373 2.70e-16 80.1
MS.gene064104.t1 MTR_2g034700 27.374 358 182 16 3 319 7 327 2.77e-16 79.7
MS.gene064104.t1 MTR_4g023100 73.585 53 13 1 313 365 65 116 2.78e-16 74.7
MS.gene064104.t1 MTR_0667s0010 24.022 358 222 12 10 335 6 345 2.84e-16 80.1
MS.gene064104.t1 MTR_5g009060 27.681 401 213 22 10 360 25 398 3.13e-16 79.7
MS.gene064104.t1 MTR_3g058480 30.325 277 135 13 10 253 39 290 3.63e-16 79.0
MS.gene064104.t1 MTR_5g097330 25.424 413 232 16 3 361 9 399 4.09e-16 79.3
MS.gene064104.t1 MTR_1g055375 25.253 396 224 18 7 360 1 366 4.22e-16 79.3
MS.gene064104.t1 MTR_7g050520 26.400 375 192 18 8 333 20 359 4.51e-16 79.3
MS.gene064104.t1 MTR_4g028660 24.069 403 248 16 2 361 8 395 4.75e-16 79.3
MS.gene064104.t1 MTR_4g027450 24.069 403 248 16 2 361 8 395 4.75e-16 79.3
MS.gene064104.t1 MTR_6g017280 24.930 357 209 15 7 321 6 345 4.94e-16 79.0
MS.gene064104.t1 MTR_7g056003 25.945 397 209 19 13 347 18 391 5.90e-16 79.0
MS.gene064104.t1 MTR_1g055055 25.215 349 213 15 7 339 23 339 6.36e-16 78.2
MS.gene064104.t1 MTR_4g030760 23.209 349 217 13 4 325 67 391 7.84e-16 79.0
MS.gene064104.t1 MTR_7g077970 25.444 338 200 11 10 305 7 334 8.92e-16 78.6
MS.gene064104.t1 MTR_4g028750 26.330 376 205 17 3 329 9 361 9.31e-16 78.6
MS.gene064104.t1 MTR_4g031770 25.484 310 191 10 7 297 1 289 1.01e-15 78.2
MS.gene064104.t1 MTR_6g048140 27.726 321 167 15 6 293 35 323 1.11e-15 78.2
MS.gene064104.t1 MTR_7g078900 24.272 412 235 16 1 355 3 394 1.13e-15 78.2
MS.gene064104.t1 MTR_3g030330 27.090 299 177 13 10 293 20 292 1.18e-15 77.8
MS.gene064104.t1 MTR_5g043160 25.995 377 206 14 13 328 53 417 1.72e-15 77.8
MS.gene064104.t1 MTR_4g030090 26.032 315 185 10 10 291 14 313 1.76e-15 77.4
MS.gene064104.t1 MTR_4g013185 24.936 389 213 16 1 324 1 375 1.88e-15 77.8
MS.gene064104.t1 MTR_7g061090 25.148 338 189 14 6 298 18 336 1.89e-15 77.4
MS.gene064104.t1 MTR_4g031020 24.936 389 205 12 10 325 15 389 1.94e-15 77.4
MS.gene064104.t1 MTR_2g028140 25.602 332 180 13 10 293 5 317 2.04e-15 77.4
MS.gene064104.t1 MTR_6g017270 29.703 202 118 6 7 186 6 205 2.20e-15 76.6
MS.gene064104.t1 MTR_2g066200 23.892 406 238 15 4 363 6 386 2.35e-15 77.0
MS.gene064104.t1 MTR_1g068860 24.722 360 224 12 7 341 1 338 2.41e-15 77.0
MS.gene064104.t1 MTR_3g030350 25.130 386 224 18 10 360 35 390 2.51e-15 77.0
MS.gene064104.t1 MTR_3g083010 23.741 417 227 14 10 362 6 395 2.51e-15 77.0
MS.gene064104.t1 MTR_7g067680 27.778 342 183 14 10 327 49 350 2.77e-15 77.0
MS.gene064104.t1 MTR_2g426070 24.384 365 219 13 11 336 7 353 2.89e-15 77.0
MS.gene064104.t1 MTR_7g066030 26.503 366 229 13 5 339 16 372 2.96e-15 77.0
MS.gene064104.t1 MTR_7g056503 23.441 401 235 16 9 360 20 397 4.30e-15 76.3
MS.gene064104.t1 MTR_5g048160 24.812 399 239 18 10 361 4 388 4.51e-15 76.3
MS.gene064104.t1 MTR_2g426090 23.691 401 241 17 8 366 5 382 4.68e-15 76.3
MS.gene064104.t1 MTR_5g068040 29.487 234 138 9 2 226 8 223 5.20e-15 75.9
MS.gene064104.t1 MTR_8g063440 26.230 366 217 12 9 340 11 357 5.41e-15 75.9
MS.gene064104.t1 MTR_1g115160 25.228 329 204 15 8 321 20 321 5.51e-15 75.9
MS.gene064104.t1 MTR_8g012090 25.373 335 199 14 13 325 19 324 6.17e-15 75.5
MS.gene064104.t1 MTR_6g086825 24.638 414 235 19 9 366 69 461 7.82e-15 75.9
MS.gene064104.t1 MTR_4g019990 26.471 408 220 20 8 359 4 387 7.92e-15 75.5
MS.gene064104.t1 MTR_2g426060 24.235 392 224 16 10 361 6 364 1.08e-14 75.1
MS.gene064104.t1 MTR_0064s0160 24.181 397 253 16 7 366 39 424 1.08e-14 75.5
MS.gene064104.t1 MTR_4g055820 25.936 374 205 15 1 322 6 359 1.08e-14 74.7
MS.gene064104.t1 MTR_7g050480 25.606 371 200 17 8 333 20 359 1.14e-14 75.1
MS.gene064104.t1 MTR_3g058470 26.000 350 163 15 10 321 37 328 1.47e-14 74.7
MS.gene064104.t1 MTR_2g078850 28.188 298 176 13 13 293 33 309 1.49e-14 74.7
MS.gene064104.t1 MTR_2g031680 23.077 351 224 12 10 337 6 333 1.60e-14 74.7
MS.gene064104.t1 MTR_2g047892 23.784 370 227 14 8 339 20 372 1.97e-14 74.3
MS.gene064104.t1 MTR_1g442850 26.667 345 185 15 9 316 4 317 2.39e-14 73.9
MS.gene064104.t1 MTR_6g055210 24.432 352 195 14 3 307 15 342 2.51e-14 74.3
MS.gene064104.t1 MTR_2g104280 24.878 410 248 15 5 366 9 406 3.00e-14 73.9
MS.gene064104.t1 MTR_4g030110 23.618 398 216 16 1 347 21 381 3.11e-14 73.6
MS.gene064104.t1 MTR_7g078040 27.350 351 194 14 6 305 5 345 3.38e-14 73.9
MS.gene064104.t1 MTR_3g024040 26.349 315 197 15 18 321 39 329 3.62e-14 73.6
MS.gene064104.t1 MTR_0242s0060 27.434 339 196 13 6 305 5 332 3.79e-14 73.6
MS.gene064104.t1 MTR_0242s0040 27.434 339 196 13 6 305 5 332 3.79e-14 73.6
MS.gene064104.t1 MTR_7g017130 25.245 408 239 15 4 366 12 398 3.82e-14 73.6
MS.gene064104.t1 MTR_5g056020 25.058 431 216 21 10 360 17 420 3.97e-14 73.9
MS.gene064104.t1 MTR_0267s0050 25.886 367 220 18 13 340 9 362 4.41e-14 73.2
MS.gene064104.t1 MTR_1g055200 46.914 81 33 2 104 176 5 83 4.44e-14 68.2
MS.gene064104.t1 MTR_4g033495 24.444 360 213 14 10 330 27 366 5.71e-14 73.2
MS.gene064104.t1 MTR_8g062660 23.971 413 208 20 5 360 17 380 6.83e-14 73.6
MS.gene064104.t1 MTR_7g057270 27.492 331 181 14 10 298 26 339 7.85e-14 72.8
MS.gene064104.t1 MTR_6g007135 25.402 311 193 10 10 297 26 320 8.05e-14 72.4
MS.gene064104.t1 MTR_2g426020 23.192 401 240 16 10 365 6 383 1.00e-13 72.4
MS.gene064104.t1 MTR_7g077070 24.665 373 210 16 8 321 14 374 1.11e-13 72.4
MS.gene064104.t1 MTR_2g028110 25.126 398 221 17 10 366 4 365 1.17e-13 72.0
MS.gene064104.t1 MTR_8g046310 27.020 396 227 18 3 362 6 375 1.20e-13 72.0
MS.gene064104.t1 MTR_6g092560 25.121 414 225 19 8 362 10 397 1.39e-13 72.0
MS.gene064104.t1 MTR_7g077990 24.033 362 209 14 3 322 10 347 2.13e-13 71.2
MS.gene064104.t1 MTR_7g056710 26.875 320 184 13 9 300 17 314 2.42e-13 70.9
MS.gene064104.t1 MTR_7g078840 25.414 362 202 12 1 305 1 351 2.66e-13 71.2
MS.gene064104.t1 MTR_1g015740 23.913 322 185 10 10 324 8 276 2.72e-13 70.5
MS.gene064104.t1 MTR_7g052670 24.942 429 235 19 2 360 13 424 2.79e-13 71.2
MS.gene064104.t1 MTR_7g035295 33.690 187 93 7 2 163 8 188 3.30e-13 70.5
MS.gene064104.t1 MTR_3g009300 26.239 343 184 15 13 335 37 330 3.56e-13 70.5
MS.gene064104.t1 MTR_7g056820 25.258 388 239 16 6 359 3 373 3.72e-13 70.5
MS.gene064104.t1 MTR_2g046860 24.790 238 149 9 101 321 5 229 3.78e-13 70.1
MS.gene064104.t1 MTR_5g023570 37.168 113 57 3 7 114 34 137 4.54e-13 66.6
MS.gene064104.t1 MTR_7g017170 25.203 369 213 13 4 329 12 360 4.68e-13 70.1
MS.gene064104.t1 MTR_7g091630 27.419 248 141 11 3 224 25 259 5.55e-13 70.1
MS.gene064104.t1 MTR_3g013950 24.069 403 237 17 8 362 5 386 5.68e-13 70.1
MS.gene064104.t1 MTR_8g013005 62.069 58 19 2 311 366 1 57 5.86e-13 63.5
MS.gene064104.t1 MTR_3g010440 31.061 132 87 2 10 137 26 157 6.13e-13 69.3
MS.gene064104.t1 MTR_7g066010 27.801 241 144 9 5 218 16 253 8.06e-13 69.3
MS.gene064104.t1 MTR_6g013270 23.636 330 219 12 10 321 29 343 8.14e-13 69.3
MS.gene064104.t1 MTR_6g079810 22.093 430 252 16 1 366 54 464 1.06e-12 69.3
MS.gene064104.t1 MTR_8g041270 25.120 418 241 15 3 366 8 407 1.48e-12 68.6
MS.gene064104.t1 MTR_0831s0010 24.363 353 216 11 9 328 49 383 1.51e-12 68.9
MS.gene064104.t1 MTR_8g063370 23.841 302 187 9 18 291 32 318 1.85e-12 68.6
MS.gene064104.t1 MTR_3g058440 28.870 239 123 10 10 220 35 254 2.66e-12 67.4
MS.gene064104.t1 MTR_5g046280 29.119 261 139 16 119 360 20 253 2.68e-12 66.6
MS.gene064104.t1 MTR_4g080200 36.875 160 79 6 10 161 3 148 3.74e-12 67.0
MS.gene064104.t1 MTR_3g096250 26.888 331 168 13 10 326 47 317 5.10e-12 66.6
MS.gene064104.t1 MTR_1g112930 25.559 313 177 15 10 299 25 304 5.81e-12 66.6
MS.gene064104.t1 MTR_7g022600 25.974 385 219 15 8 343 21 388 6.88e-12 66.6
MS.gene064104.t1 MTR_7g037670 30.833 240 128 9 10 233 23 240 6.92e-12 66.2
MS.gene064104.t1 MTR_1g056710 26.235 324 180 15 2 297 26 318 7.96e-12 66.2
MS.gene064104.t1 MTR_8g099460 25.610 328 177 15 8 297 3 301 7.98e-12 66.6
MS.gene064104.t1 MTR_7g079160 23.598 428 236 17 6 358 4 415 8.17e-12 66.6
MS.gene064104.t1 MTR_4g013175 27.041 392 187 20 8 324 8 375 9.80e-12 66.2
MS.gene064104.t1 MTR_4g024870 25.896 251 138 8 1 223 35 265 1.06e-11 66.2
MS.gene064104.t1 MTR_8g101940 27.731 238 120 9 10 220 2 214 1.11e-11 65.9
MS.gene064104.t1 MTR_2g024100 24.706 340 189 14 25 322 22 336 1.35e-11 65.9
MS.gene064104.t1 MTR_2g065860 25.203 246 143 9 3 216 5 241 1.41e-11 65.9
MS.gene064104.t1 MTR_0134s0060 25.899 278 130 12 4 222 6 266 1.70e-11 65.5
MS.gene064104.t1 MTR_0054s0100 21.445 429 248 14 1 363 1 406 1.89e-11 65.5
MS.gene064104.t1 MTR_7g050490 30.612 196 103 8 8 183 6 188 2.15e-11 62.8
MS.gene064104.t1 MTR_5g092850 25.414 362 218 13 9 330 15 364 3.28e-11 64.7
MS.gene064104.t1 MTR_2g437110 23.020 404 231 17 7 360 19 392 4.11e-11 64.7
MS.gene064104.t1 MTR_1g071010 23.708 329 203 13 10 306 15 327 4.40e-11 64.3
MS.gene064104.t1 MTR_1g009110 25.414 362 208 17 13 339 17 351 4.67e-11 63.9
MS.gene064104.t1 MTR_5g074800 25.316 316 164 14 90 357 45 336 5.80e-11 63.5
MS.gene064104.t1 MTR_5g097820 26.394 269 144 10 3 232 16 269 6.15e-11 62.8
MS.gene064104.t1 MTR_1g022200 23.204 362 219 15 7 339 12 343 6.49e-11 63.5
MS.gene064104.t1 MTR_4g011660 24.930 357 196 16 8 310 17 355 6.49e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064104.t1 AT4G12560 25.269 372 233 13 7 349 1 356 1.21e-23 101
MS.gene064104.t1 AT4G12560 25.269 372 233 13 7 349 1 356 1.21e-23 101
MS.gene064104.t1 AT4G12560 25.269 372 233 13 7 349 1 356 1.21e-23 101
MS.gene064104.t1 AT3G06240 25.122 410 222 14 10 360 36 419 9.83e-22 96.3
MS.gene064104.t1 AT3G23880 28.846 312 186 14 10 302 14 308 3.52e-20 90.9
MS.gene064104.t1 AT3G16590 27.920 351 194 17 10 325 5 331 9.29e-18 84.3
MS.gene064104.t1 AT3G16210 28.146 302 185 11 9 305 4 278 2.68e-16 79.7
MS.gene064104.t1 AT2G40910 23.276 348 225 12 2 322 61 393 4.06e-15 76.6
MS.gene064104.t1 AT2G40910 24.299 321 204 11 2 298 54 359 4.48e-15 76.6
MS.gene064104.t1 AT4G22390 25.000 400 228 18 7 364 1 370 9.68e-15 75.5
MS.gene064104.t1 AT4G22390 25.000 400 228 18 7 364 1 370 1.10e-14 75.1
MS.gene064104.t1 AT4G19940 24.859 354 212 13 2 322 27 359 1.87e-14 74.7
MS.gene064104.t1 AT5G62510 24.852 338 216 14 10 325 44 365 8.04e-14 72.8
MS.gene064104.t1 AT1G33530 26.174 298 184 12 8 294 95 367 5.05e-13 70.5
MS.gene064104.t1 AT3G10240 23.988 346 194 15 10 324 27 334 5.24e-13 70.1
MS.gene064104.t1 AT3G21120 25.000 264 165 13 8 252 1 250 2.65e-12 67.8
MS.gene064104.t1 AT2G40925 26.814 317 183 12 10 298 27 322 2.67e-12 68.2
MS.gene064104.t1 AT1G11620 23.885 381 237 19 10 363 6 360 2.93e-12 67.8
MS.gene064104.t1 AT5G49610 25.272 368 206 20 1 338 1 329 3.76e-11 64.3
MS.gene064104.t1 AT3G17570 23.790 248 164 7 10 249 5 235 5.10e-11 63.9
MS.gene064104.t1 AT3G18910 25.316 316 197 15 10 303 8 306 8.37e-11 63.5

Find 70 sgRNAs with CRISPR-Local

Find 83 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATACCTCTTCAAAATGATTT+TGG 0.149878 4.3:-75306672 MS.gene064104:CDS
ATAAATGGGTTGCTCTTTAA+TGG 0.166197 4.3:-75306780 MS.gene064104:CDS
TTGTCTTTGATTTAATTAAA+AGG 0.216028 4.3:-75306707 MS.gene064104:CDS
TCAAAAGGAAAATATGAATT+AGG 0.227164 4.3:+75307110 None:intergenic
AATACAAAGTGCATTCTTCT+TGG 0.230335 4.3:-75306542 MS.gene064104:CDS
TTGGCTTGTCGTCGTGATTT+AGG 0.260497 4.3:-75306744 MS.gene064104:CDS
TATGATAATCTGTATGGTTT+TGG 0.274613 4.3:-75306966 MS.gene064104:CDS
GATTCCGGTTTGTGGGTATT+TGG 0.277773 4.3:-75306630 MS.gene064104:CDS
AATTAGGAAGCAAGAAATTA+AGG 0.281563 4.3:+75307126 None:intergenic
ACACATACTCGTAGAATTAT+AGG 0.296175 4.3:-75307224 MS.gene064104:CDS
TTCCCATGTTTCATCACATT+TGG 0.328005 4.3:-75306904 MS.gene064104:CDS
GTCTTCCAGACATCTGCTTA+TGG 0.347737 4.3:-75307049 MS.gene064104:CDS
CTTACTTTAGATGCTGATTC+CGG 0.358213 4.3:-75306645 MS.gene064104:CDS
CAGATTATCATATAGTTTGT+TGG 0.362536 4.3:+75306977 None:intergenic
TGTTTCTTAAATCCAGTAGA+TGG 0.370350 4.3:+75307023 None:intergenic
CCATGTTTCATCACATTTGG+AGG 0.371492 4.3:-75306901 MS.gene064104:CDS
ATGGTGAAAGAATTGAAATA+TGG 0.371717 4.3:-75306575 MS.gene064104:CDS
GGGGAAACGTATAAGTTAAC+TGG 0.373785 4.3:+75306486 None:intergenic
TCAAGTGTGTTTGTAAATCA+TGG 0.375911 4.3:-75307304 MS.gene064104:CDS
TCTTTAATGGAGCTATTCAT+TGG 0.389826 4.3:-75306767 MS.gene064104:CDS
CACGACCCTTTGATTTCAAA+AGG 0.394860 4.3:+75307095 None:intergenic
ACTGGCAACCTCAACAAGAT+TGG 0.401622 4.3:+75307344 None:intergenic
GAGTCTCTGCTTTCACTCCC+TGG 0.410331 4.3:-75306327 MS.gene064104:CDS
ATCCAAAGTTGTCATGTATA+CGG 0.413606 4.3:-75306349 MS.gene064104:CDS
TAGATGCTGATTCCGGTTTG+TGG 0.421212 4.3:-75306638 MS.gene064104:CDS
TAATGGAGCTATTCATTGGT+TGG 0.432453 4.3:-75306763 MS.gene064104:CDS
AACAACTGATGGTACTATAT+TGG 0.437822 4.3:-75306427 MS.gene064104:CDS
TTGGCGAATCTCTAAGCATA+TGG 0.443629 4.3:-75306611 MS.gene064104:CDS
AGATGCTGATTCCGGTTTGT+GGG 0.448693 4.3:-75306637 MS.gene064104:CDS
TGCTTATGGAATCCATCTAC+TGG 0.449081 4.3:-75307035 MS.gene064104:CDS
GGATTCCATAAGCAGATGTC+TGG 0.451235 4.3:+75307044 None:intergenic
CTGGCAACCTCAACAAGATT+GGG 0.451878 4.3:+75307345 None:intergenic
AGTCTCTGCTTTCACTCCCT+GGG 0.462176 4.3:-75306326 MS.gene064104:CDS
TGGTGAAGTACAATAGTAAA+GGG 0.475980 4.3:-75306407 MS.gene064104:CDS
AAACTATATGATAATCTGTA+TGG 0.478779 4.3:-75306972 MS.gene064104:CDS
TTGGTGAAGTACAATAGTAA+AGG 0.490065 4.3:-75306408 MS.gene064104:CDS
CCTCCAAATGTGATGAAACA+TGG 0.491416 4.3:+75306901 None:intergenic
CTCCGTATACATGACAACTT+TGG 0.500853 4.3:+75306347 None:intergenic
ATTATTATTGTAACAACTGA+TGG 0.505632 4.3:-75306438 MS.gene064104:CDS
TCTCATTTAGAGATAATATG+TGG 0.506401 4.3:-75306875 MS.gene064104:CDS
TAAACTTACTCATTGTCCCC+AGG 0.510817 4.3:+75306309 None:intergenic
TTCGCCAAATACCCACAAAC+CGG 0.512143 4.3:+75306626 None:intergenic
GGAAGCAAGAAATTAAGGTT+CGG 0.517902 4.3:+75307131 None:intergenic
AAATTGTGAATTTGCAAAGG+TGG 0.527008 4.3:+75307262 None:intergenic
GTATACATGACAACTTTGGA+TGG 0.537797 4.3:+75306351 None:intergenic
AAATCAAAGGGTCGTGTCGA+GGG 0.545514 4.3:-75307088 MS.gene064104:CDS
ATATGGATATTAACTTCTGA+TGG 0.553516 4.3:-75306594 MS.gene064104:CDS
TGGTGAAAGAATTGAAATAT+GGG 0.553900 4.3:-75306574 MS.gene064104:CDS
AAACGTATAAGATACTTCAC+TGG 0.555636 4.3:+75307326 None:intergenic
TTGAAATTGTGAATTTGCAA+AGG 0.560927 4.3:+75307259 None:intergenic
AAACTTACTCATTGTCCCCA+GGG 0.563123 4.3:+75306310 None:intergenic
TGATAATCCCAATCTTGTTG+AGG 0.563764 4.3:-75307352 MS.gene064104:CDS
AATTGTGAATTTGCAAAGGT+GGG 0.564410 4.3:+75307263 None:intergenic
CCACGTAATCATCTCTTGAC+TGG 0.567011 4.3:+75306937 None:intergenic
AATATGTGGAAAGAAATTGA+TGG 0.574366 4.3:-75306861 MS.gene064104:CDS
GAAATCAAAGGGTCGTGTCG+AGG 0.574963 4.3:-75307089 MS.gene064104:CDS
CTCCAAATGTGATGAAACAT+GGG 0.581858 4.3:+75306902 None:intergenic
GATCTATAGATGTTGATGCA+TGG 0.606626 4.3:-75307175 MS.gene064104:CDS
AAGAAATTAAGGTTCGGTGA+AGG 0.609785 4.3:+75307137 None:intergenic
TTGTCGTCGTGATTTAGGAA+TGG 0.626764 4.3:-75306739 MS.gene064104:CDS
ATTGGGATTATCAAATCATG+AGG 0.629275 4.3:+75307362 None:intergenic
CATGGAAAAGAAGAAGACAT+TGG 0.639086 4.3:-75307393 MS.gene064104:CDS
ATAAGCAGATGTCTGGAAGA+CGG 0.646496 4.3:+75307051 None:intergenic
GTCTCTGCTTTCACTCCCTG+GGG 0.652268 4.3:-75306325 MS.gene064104:CDS
TTGGAATCAAAAGAAGACGC+GGG 0.654145 4.3:+75306996 None:intergenic
TCTACGAGTATGTGTTGCGG+CGG 0.680740 4.3:+75307232 None:intergenic
CCAGTCAAGAGATGATTACG+TGG 0.690893 4.3:-75306937 MS.gene064104:CDS
GTTGGAATCAAAAGAAGACG+CGG 0.694282 4.3:+75306995 None:intergenic
AATTCTACGAGTATGTGTTG+CGG 0.702642 4.3:+75307229 None:intergenic
GTCAAGAGATGATTACGTGG+TGG 0.708970 4.3:-75306934 MS.gene064104:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTCTTTGATTTAATTAAA+AGG - chr4.3:75306999-75307018 MS.gene064104:CDS 15.0%
!!! TTTGTTTTTTTGAAAGATAA+GGG + chr4.3:75306880-75306899 None:intergenic 15.0%
!!! TTTTGTTTTTTTGAAAGATA+AGG + chr4.3:75306881-75306900 None:intergenic 15.0%
!! AAACTATATGATAATCTGTA+TGG - chr4.3:75306734-75306753 MS.gene064104:CDS 20.0%
!! ATTATTATTGTAACAACTGA+TGG - chr4.3:75307268-75307287 MS.gene064104:CDS 20.0%
!! TCAAAAGGAAAATATGAATT+AGG + chr4.3:75306599-75306618 None:intergenic 20.0%
!! TTATGTGATCACAAAAATAA+GGG + chr4.3:75306910-75306929 None:intergenic 20.0%
!! TTTATGTGATCACAAAAATA+AGG + chr4.3:75306911-75306930 None:intergenic 20.0%
!!! AATAATTTCACCATTTTTTG+TGG + chr4.3:75307254-75307273 None:intergenic 20.0%
!!! ATTTTCCTTTTGAAATCAAA+GGG - chr4.3:75306606-75306625 MS.gene064104:CDS 20.0%
!!! ATTTTTGTGATCACATAAAT+GGG - chr4.3:75306912-75306931 MS.gene064104:CDS 20.0%
!!! TATTTTCCTTTTGAAATCAA+AGG - chr4.3:75306605-75306624 MS.gene064104:CDS 20.0%
!!! TATTTTTGTGATCACATAAA+TGG - chr4.3:75306911-75306930 MS.gene064104:CDS 20.0%
! AATATGTGGAAAGAAATTGA+TGG - chr4.3:75306845-75306864 MS.gene064104:CDS 25.0%
! AATTAGGAAGCAAGAAATTA+AGG + chr4.3:75306583-75306602 None:intergenic 25.0%
! ATATGGATATTAACTTCTGA+TGG - chr4.3:75307112-75307131 MS.gene064104:CDS 25.0%
! ATGGTGAAAGAATTGAAATA+TGG - chr4.3:75307131-75307150 MS.gene064104:CDS 25.0%
! TATGTGATCACAAAAATAAG+GGG + chr4.3:75306909-75306928 None:intergenic 25.0%
! TCTCATTTAGAGATAATATG+TGG - chr4.3:75306831-75306850 MS.gene064104:CDS 25.0%
! TGGTGAAAGAATTGAAATAT+GGG - chr4.3:75307132-75307151 MS.gene064104:CDS 25.0%
! TTGAAATTGTGAATTTGCAA+AGG + chr4.3:75306450-75306469 None:intergenic 25.0%
!! ATACCTCTTCAAAATGATTT+TGG - chr4.3:75307034-75307053 MS.gene064104:CDS 25.0%
!! CAGATTATCATATAGTTTGT+TGG + chr4.3:75306732-75306751 None:intergenic 25.0%
!! TATGATAATCTGTATGGTTT+TGG - chr4.3:75306740-75306759 MS.gene064104:CDS 25.0%
AAACGTATAAGATACTTCAC+TGG + chr4.3:75306383-75306402 None:intergenic 30.0%
AAATTGTGAATTTGCAAAGG+TGG + chr4.3:75306447-75306466 None:intergenic 30.0%
AACAACTGATGGTACTATAT+TGG - chr4.3:75307279-75307298 MS.gene064104:CDS 30.0%
AATACAAAGTGCATTCTTCT+TGG - chr4.3:75307164-75307183 MS.gene064104:CDS 30.0%
AATTGTGAATTTGCAAAGGT+GGG + chr4.3:75306446-75306465 None:intergenic 30.0%
ACACATACTCGTAGAATTAT+AGG - chr4.3:75306482-75306501 MS.gene064104:CDS 30.0%
ATCCAAAGTTGTCATGTATA+CGG - chr4.3:75307357-75307376 MS.gene064104:CDS 30.0%
ATTGGGATTATCAAATCATG+AGG + chr4.3:75306347-75306366 None:intergenic 30.0%
TCAAGTGTGTTTGTAAATCA+TGG - chr4.3:75306402-75306421 MS.gene064104:CDS 30.0%
TCTTTAATGGAGCTATTCAT+TGG - chr4.3:75306939-75306958 MS.gene064104:CDS 30.0%
TGGTGAAGTACAATAGTAAA+GGG - chr4.3:75307299-75307318 MS.gene064104:CDS 30.0%
TGTTTCTTAAATCCAGTAGA+TGG + chr4.3:75306686-75306705 None:intergenic 30.0%
TTGGTGAAGTACAATAGTAA+AGG - chr4.3:75307298-75307317 MS.gene064104:CDS 30.0%
!! ATAAATGGGTTGCTCTTTAA+TGG - chr4.3:75306926-75306945 MS.gene064104:CDS 30.0%
!!! ATTTTTTGTGGAGTACATAG+GGG + chr4.3:75307242-75307261 None:intergenic 30.0%
!!! CATTTTTTGTGGAGTACATA+GGG + chr4.3:75307243-75307262 None:intergenic 30.0%
AATTCTACGAGTATGTGTTG+CGG + chr4.3:75306480-75306499 None:intergenic 35.0%
CCTATGTACTCCACAAAAAA+TGG - chr4.3:75307241-75307260 MS.gene064104:CDS 35.0%
CTCCAAATGTGATGAAACAT+GGG + chr4.3:75306807-75306826 None:intergenic 35.0%
GATCTATAGATGTTGATGCA+TGG - chr4.3:75306531-75306550 MS.gene064104:CDS 35.0%
GGAAGCAAGAAATTAAGGTT+CGG + chr4.3:75306578-75306597 None:intergenic 35.0%
GTATACATGACAACTTTGGA+TGG + chr4.3:75307358-75307377 None:intergenic 35.0%
TAATGGAGCTATTCATTGGT+TGG - chr4.3:75306943-75306962 MS.gene064104:CDS 35.0%
TGATAATCCCAATCTTGTTG+AGG - chr4.3:75306354-75306373 MS.gene064104:CDS 35.0%
TTCCCATGTTTCATCACATT+TGG - chr4.3:75306802-75306821 MS.gene064104:CDS 35.0%
! CCTCTTCAAAATGATTTTGG+CGG - chr4.3:75307037-75307056 MS.gene064104:CDS 35.0%
!! AAGAAATTAAGGTTCGGTGA+AGG + chr4.3:75306572-75306591 None:intergenic 35.0%
!! CTTACTTTAGATGCTGATTC+CGG - chr4.3:75307061-75307080 MS.gene064104:CDS 35.0%
!!! CCATTTTTTGTGGAGTACAT+AGG + chr4.3:75307244-75307263 None:intergenic 35.0%
ATAAGCAGATGTCTGGAAGA+CGG + chr4.3:75306658-75306677 None:intergenic 40.0%
CCATGTTTCATCACATTTGG+AGG - chr4.3:75306805-75306824 MS.gene064104:CDS 40.0%
CCTCCAAATGTGATGAAACA+TGG + chr4.3:75306808-75306827 None:intergenic 40.0%
CTCCGTATACATGACAACTT+TGG + chr4.3:75307362-75307381 None:intergenic 40.0%
GGGGAAACGTATAAGTTAAC+TGG + chr4.3:75307223-75307242 None:intergenic 40.0%
GTTGGAATCAAAAGAAGACG+CGG + chr4.3:75306714-75306733 None:intergenic 40.0%
TGCTTATGGAATCCATCTAC+TGG - chr4.3:75306671-75306690 MS.gene064104:CDS 40.0%
TTGGAATCAAAAGAAGACGC+GGG + chr4.3:75306713-75306732 None:intergenic 40.0%
TTGGCGAATCTCTAAGCATA+TGG - chr4.3:75307095-75307114 MS.gene064104:CDS 40.0%
TTGTCGTCGTGATTTAGGAA+TGG - chr4.3:75306967-75306986 MS.gene064104:CDS 40.0%
! CACGACCCTTTGATTTCAAA+AGG + chr4.3:75306614-75306633 None:intergenic 40.0%
!! CCGCCAAAATCATTTTGAAG+AGG + chr4.3:75307040-75307059 None:intergenic 40.0%
AAATCAAAGGGTCGTGTCGA+GGG - chr4.3:75306618-75306637 MS.gene064104:CDS 45.0%
ACTGGCAACCTCAACAAGAT+TGG + chr4.3:75306365-75306384 None:intergenic 45.0%
CCACGTAATCATCTCTTGAC+TGG + chr4.3:75306772-75306791 None:intergenic 45.0%
CCAGTCAAGAGATGATTACG+TGG - chr4.3:75306769-75306788 MS.gene064104:CDS 45.0%
CTGGCAACCTCAACAAGATT+GGG + chr4.3:75306364-75306383 None:intergenic 45.0%
GGATTCCATAAGCAGATGTC+TGG + chr4.3:75306665-75306684 None:intergenic 45.0%
GTCAAGAGATGATTACGTGG+TGG - chr4.3:75306772-75306791 MS.gene064104:CDS 45.0%
GTCTTCCAGACATCTGCTTA+TGG - chr4.3:75306657-75306676 MS.gene064104:CDS 45.0%
TTCGCCAAATACCCACAAAC+CGG + chr4.3:75307083-75307102 None:intergenic 45.0%
! GATTCCGGTTTGTGGGTATT+TGG - chr4.3:75307076-75307095 MS.gene064104:CDS 45.0%
!! AGATGCTGATTCCGGTTTGT+GGG - chr4.3:75307069-75307088 MS.gene064104:CDS 45.0%
!! TAGATGCTGATTCCGGTTTG+TGG - chr4.3:75307068-75307087 MS.gene064104:CDS 45.0%
!! TTGGCTTGTCGTCGTGATTT+AGG - chr4.3:75306962-75306981 MS.gene064104:CDS 45.0%
AGTCTCTGCTTTCACTCCCT+GGG - chr4.3:75307380-75307399 MS.gene064104:CDS 50.0%
GAAATCAAAGGGTCGTGTCG+AGG - chr4.3:75306617-75306636 MS.gene064104:CDS 50.0%
TCTACGAGTATGTGTTGCGG+CGG + chr4.3:75306477-75306496 None:intergenic 50.0%
GAGTCTCTGCTTTCACTCCC+TGG - chr4.3:75307379-75307398 MS.gene064104:CDS 55.0%
GTCTCTGCTTTCACTCCCTG+GGG - chr4.3:75307381-75307400 MS.gene064104:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 75306314 75307414 75306314 ID=MS.gene064104
chr4.3 mRNA 75306314 75307414 75306314 ID=MS.gene064104.t1;Parent=MS.gene064104
chr4.3 exon 75306314 75307414 75306314 ID=MS.gene064104.t1.exon1;Parent=MS.gene064104.t1
chr4.3 CDS 75306314 75307414 75306314 ID=cds.MS.gene064104.t1;Parent=MS.gene064104.t1
Gene Sequence

>MS.gene064104

ATGGAAAAGAAGAAGACATTGGTGTATCTTCCTCATGATTTGATAATCCCAATCTTGTTGAGGTTGCCAGTGAAGTATCTTATACGTTTCAAGTGTGTTTGTAAATCATGGTTTTCTATTATCTCTGATCCCACCTTTGCAAATTCACAATTTCAATTCACCGCCGCAACACATACTCGTAGAATTATAGGCTTATCAGCTTTATCTCATGAAATTCGATCTATAGATGTTGATGCATGGCTTAACGATGATCTTCCTTCACCGAACCTTAATTTCTTGCTTCCTAATTCATATTTTCCTTTTGAAATCAAAGGGTCGTGTCGAGGGTTTTTATTTTTATACCGTCTTCCAGACATCTGCTTATGGAATCCATCTACTGGATTTAAGAAACAAATACCCGCGTCTTCTTTTGATTCCAACAAACTATATGATAATCTGTATGGTTTTGGTTATGACCAGTCAAGAGATGATTACGTGGTGGTTGTATTTTCCCATGTTTCATCACATTTGGAGGTTTTCTCATTTAGAGATAATATGTGGAAAGAAATTGATGGTATTCTATTCCCTTATCTTTCAAAAAAACAAAAAAAATCCCCTTATTTTTGTGATCACATAAATGGGTTGCTCTTTAATGGAGCTATTCATTGGTTGGCTTGTCGTCGTGATTTAGGAATGGATGTTATTATTGTCTTTGATTTAATTAAAAGGAAACTGATTGAAATACCTCTTCAAAATGATTTTGGCGGACTTACTTTAGATGCTGATTCCGGTTTGTGGGTATTTGGCGAATCTCTAAGCATATGGATATTAACTTCTGATGGTGAAAGAATTGAAATATGGGTGTTGAAAGAATACAAAGTGCATTCTTCTTGGAATAAAACTCTTGTTCTTTCTGTTGATTTCATTCCAGTTAACTTATACGTTTCCCCTATGTACTCCACAAAAAATGGTGAAATTATTATTGTAACAACTGATGGTACTATATTGGTGAAGTACAATAGTAAAGGGCAGCTGTTAGAGCATCAATCATTCTGTAACAGTCCATCCAAAGTTGTCATGTATACGGAGTCTCTGCTTTCACTCCCTGGGGACAATGAGTAA

Protein sequence

>MS.gene064104.t1

MEKKKTLVYLPHDLIIPILLRLPVKYLIRFKCVCKSWFSIISDPTFANSQFQFTAATHTRRIIGLSALSHEIRSIDVDAWLNDDLPSPNLNFLLPNSYFPFEIKGSCRGFLFLYRLPDICLWNPSTGFKKQIPASSFDSNKLYDNLYGFGYDQSRDDYVVVVFSHVSSHLEVFSFRDNMWKEIDGILFPYLSKKQKKSPYFCDHINGLLFNGAIHWLACRRDLGMDVIIVFDLIKRKLIEIPLQNDFGGLTLDADSGLWVFGESLSIWILTSDGERIEIWVLKEYKVHSSWNKTLVLSVDFIPVNLYVSPMYSTKNGEIIIVTTDGTILVKYNSKGQLLEHQSFCNSPSKVVMYTESLLSLPGDNE