AlfalfaGEDB | MS.gene57538

M. sativa cultivar XinJiangDaYe / MS.gene57538

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57538.t1	RHN40013.1	72.3	177	40	3	2	171	217	391	3.20E-65	258.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57538.t1	Q8GXC7	29.2	130	79	6	9	132	252	374	3.7e-06	53.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57538.t1	G7LCP4	72.3	177	40	3	2	171	196	370	2.3e-65	258.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene011679	MS.gene57538	PPI
MS.gene87554	MS.gene57538	PPI
MS.gene57538	MS.gene058696	PPI
MS.gene060370	MS.gene57538	PPI
MS.gene033079	MS.gene57538	PPI
MS.gene57538	MS.gene009893	PPI
MS.gene64001	MS.gene57538	PPI
MS.gene57533	MS.gene57538	PPI
MS.gene51190	MS.gene57538	PPI
MS.gene032970	MS.gene57538	PPI
MS.gene035238	MS.gene57538	PPI
MS.gene77856	MS.gene57538	PPI
MS.gene24826	MS.gene57538	PPI
MS.gene57532	MS.gene57538	PPI
MS.gene68890	MS.gene57538	PPI
MS.gene40887	MS.gene57538	PPI
MS.gene80610	MS.gene57538	PPI
MS.gene034688	MS.gene57538	PPI
MS.gene51188	MS.gene57538	PPI
MS.gene060366	MS.gene57538	PPI
MS.gene047279	MS.gene57538	PPI
MS.gene48221	MS.gene57538	PPI
MS.gene57529	MS.gene57538	PPI
MS.gene80884	MS.gene57538	PPI
MS.gene57538	MS.gene045473	PPI
MS.gene041395	MS.gene57538	PPI
MS.gene40886	MS.gene57538	PPI
MS.gene40902	MS.gene57538	PPI
MS.gene03060	MS.gene57538	PPI
MS.gene57538	MS.gene40984	PPI
MS.gene27051	MS.gene57538	PPI
MS.gene060368	MS.gene57538	PPI
MS.gene033875	MS.gene57538	PPI
MS.gene57538	MS.gene016220	PPI
MS.gene77704	MS.gene57538	PPI
MS.gene058696	MS.gene57538	PPI
MS.gene27020	MS.gene57538	PPI
MS.gene066620	MS.gene57538	PPI
MS.gene035236	MS.gene57538	PPI
MS.gene50305	MS.gene57538	PPI
MS.gene86273	MS.gene57538	PPI
MS.gene041394	MS.gene57538	PPI
MS.gene059157	MS.gene57538	PPI
MS.gene51208	MS.gene57538	PPI
MS.gene57525	MS.gene57538	PPI
MS.gene028390	MS.gene57538	PPI
MS.gene011106	MS.gene57538	PPI
MS.gene62398	MS.gene57538	PPI
MS.gene60027	MS.gene57538	PPI
MS.gene57538	MS.gene58240	PPI
MS.gene064083	MS.gene57538	PPI
MS.gene28758	MS.gene57538	PPI
MS.gene045475	MS.gene57538	PPI
MS.gene57538	MS.gene27284	PPI
MS.gene88776	MS.gene57538	PPI
MS.gene57538	MS.gene034680	PPI
MS.gene35068	MS.gene57538	PPI
MS.gene041390	MS.gene57538	PPI
MS.gene90744	MS.gene57538	PPI
MS.gene24286	MS.gene57538	PPI
MS.gene51204	MS.gene57538	PPI
MS.gene58783	MS.gene57538	PPI
MS.gene058693	MS.gene57538	PPI
MS.gene92376	MS.gene57538	PPI
MS.gene000035	MS.gene57538	PPI
MS.gene50329	MS.gene57538	PPI
MS.gene070462	MS.gene57538	PPI
MS.gene31637	MS.gene57538	PPI
MS.gene87573	MS.gene57538	PPI
MS.gene57537	MS.gene57538	PPI
MS.gene42447	MS.gene57538	PPI
MS.gene019504	MS.gene57538	PPI
MS.gene034762	MS.gene57538	PPI
MS.gene064114	MS.gene57538	PPI
MS.gene059156	MS.gene57538	PPI
MS.gene041468	MS.gene57538	PPI
MS.gene57538	MS.gene033442	PPI
MS.gene82082	MS.gene57538	PPI
MS.gene22715	MS.gene57538	PPI
MS.gene033444	MS.gene57538	PPI
MS.gene50306	MS.gene57538	PPI
MS.gene58316	MS.gene57538	PPI
MS.gene38220	MS.gene57538	PPI
MS.gene26949	MS.gene57538	PPI
MS.gene012215	MS.gene57538	PPI
MS.gene024008	MS.gene57538	PPI
MS.gene50309	MS.gene57538	PPI
MS.gene87200	MS.gene57538	PPI
MS.gene57538	MS.gene041489	PPI
MS.gene58311	MS.gene57538	PPI
MS.gene58319	MS.gene57538	PPI
MS.gene058669	MS.gene57538	PPI
MS.gene59637	MS.gene57538	PPI
MS.gene26830	MS.gene57538	PPI
MS.gene033432	MS.gene57538	PPI
MS.gene044425	MS.gene57538	PPI
MS.gene041489	MS.gene57538	PPI
MS.gene59639	MS.gene57538	PPI
MS.gene031590	MS.gene57538	PPI
MS.gene50327	MS.gene57538	PPI
MS.gene57538	MS.gene035238	PPI
MS.gene066635	MS.gene57538	PPI
MS.gene010758	MS.gene57538	PPI
MS.gene96406	MS.gene57538	PPI
MS.gene87586	MS.gene57538	PPI
MS.gene57530	MS.gene57538	PPI
MS.gene066626	MS.gene57538	PPI
MS.gene57538	MS.gene80610	PPI
MS.gene50326	MS.gene57538	PPI
MS.gene42451	MS.gene57538	PPI
MS.gene51200	MS.gene57538	PPI
MS.gene50339	MS.gene57538	PPI
MS.gene54541	MS.gene57538	PPI
MS.gene046958	MS.gene57538	PPI
MS.gene87564	MS.gene57538	PPI
MS.gene88774	MS.gene57538	PPI
MS.gene57538	MS.gene041391	PPI
MS.gene42452	MS.gene57538	PPI
MS.gene40986	MS.gene57538	PPI
MS.gene063414	MS.gene57538	PPI
MS.gene69307	MS.gene57538	PPI
MS.gene009892	MS.gene57538	PPI
MS.gene036662	MS.gene57538	PPI
MS.gene87563	MS.gene57538	PPI
MS.gene57538	MS.gene064083	PPI
MS.gene57526	MS.gene57538	PPI
MS.gene021553	MS.gene57538	PPI
MS.gene051820	MS.gene57538	PPI
MS.gene26957	MS.gene57538	PPI
MS.gene97996	MS.gene57538	PPI
MS.gene036582	MS.gene57538	PPI
MS.gene27021	MS.gene57538	PPI
MS.gene034680	MS.gene57538	PPI
MS.gene57538	MS.gene024008	PPI
MS.gene035235	MS.gene57538	PPI
MS.gene40988	MS.gene57538	PPI
MS.gene26101	MS.gene57538	PPI
MS.gene066120	MS.gene57538	PPI
MS.gene27283	MS.gene57538	PPI
MS.gene045140	MS.gene57538	PPI
MS.gene63657	MS.gene57538	PPI
MS.gene053299	MS.gene57538	PPI
MS.gene024004	MS.gene57538	PPI
MS.gene58781	MS.gene57538	PPI
MS.gene57538	MS.gene28758	PPI
MS.gene57717	MS.gene57538	PPI
MS.gene033440	MS.gene57538	PPI
MS.gene44886	MS.gene57538	PPI
MS.gene87562	MS.gene57538	PPI
MS.gene066623	MS.gene57538	PPI
MS.gene038756	MS.gene57538	PPI
MS.gene40904	MS.gene57538	PPI
MS.gene40984	MS.gene57538	PPI
MS.gene033442	MS.gene57538	PPI
MS.gene024420	MS.gene57538	PPI
MS.gene87569	MS.gene57538	PPI
MS.gene041491	MS.gene57538	PPI
MS.gene51201	MS.gene57538	PPI
MS.gene88416	MS.gene57538	PPI
MS.gene033443	MS.gene57538	PPI
MS.gene51207	MS.gene57538	PPI
MS.gene50311	MS.gene57538	PPI
MS.gene059096	MS.gene57538	PPI
MS.gene57528	MS.gene57538	PPI
MS.gene50297	MS.gene57538	PPI
MS.gene006711	MS.gene57538	PPI
MS.gene27285	MS.gene57538	PPI
MS.gene58716	MS.gene57538	PPI
MS.gene68580	MS.gene57538	PPI
MS.gene019505	MS.gene57538	PPI
MS.gene053257	MS.gene57538	PPI
MS.gene045476	MS.gene57538	PPI
MS.gene58785	MS.gene57538	PPI
MS.gene24208	MS.gene57538	PPI
MS.gene50307	MS.gene57538	PPI
MS.gene034690	MS.gene57538	PPI
MS.gene044429	MS.gene57538	PPI
MS.gene024009	MS.gene57538	PPI
MS.gene066639	MS.gene57538	PPI
MS.gene51189	MS.gene57538	PPI
MS.gene036599	MS.gene57538	PPI
MS.gene044426	MS.gene57538	PPI
MS.gene85454	MS.gene57538	PPI
MS.gene96407	MS.gene57538	PPI
MS.gene036558	MS.gene57538	PPI
MS.gene036760	MS.gene57538	PPI
MS.gene57538	MS.gene058703	PPI
MS.gene77857	MS.gene57538	PPI
MS.gene27022	MS.gene57538	PPI
MS.gene43790	MS.gene57538	PPI
MS.gene57527	MS.gene57538	PPI
MS.gene51191	MS.gene57538	PPI
MS.gene57538	MS.gene024000	PPI
MS.gene033426	MS.gene57538	PPI
MS.gene035237	MS.gene57538	PPI
MS.gene016220	MS.gene57538	PPI
MS.gene064086	MS.gene57538	PPI
MS.gene034681	MS.gene57538	PPI
MS.gene034677	MS.gene57538	PPI
MS.gene50298	MS.gene57538	PPI
MS.gene036584	MS.gene57538	PPI
MS.gene67687	MS.gene57538	PPI
MS.gene035261	MS.gene57538	PPI
MS.gene063670	MS.gene57538	PPI
MS.gene27319	MS.gene57538	PPI
MS.gene57538	MS.gene36595	PPI
MS.gene71159	MS.gene57538	PPI
MS.gene019506	MS.gene57538	PPI
MS.gene77858	MS.gene57538	PPI
MS.gene006705	MS.gene57538	PPI
MS.gene058692	MS.gene57538	PPI
MS.gene57538	MS.gene061240	PPI
MS.gene033083	MS.gene57538	PPI
MS.gene69309	MS.gene57538	PPI
MS.gene63658	MS.gene57538	PPI
MS.gene024002	MS.gene57538	PPI
MS.gene033081	MS.gene57538	PPI
MS.gene036581	MS.gene57538	PPI
MS.gene57538	MS.gene50311	PPI
MS.gene57538	MS.gene058989	PPI
MS.gene035263	MS.gene57538	PPI
MS.gene57538	MS.gene041468	PPI
MS.gene035262	MS.gene57538	PPI
MS.gene034686	MS.gene57538	PPI
MS.gene40982	MS.gene57538	PPI
MS.gene57538	MS.gene27319	PPI
MS.gene070461	MS.gene57538	PPI
MS.gene003076	MS.gene57538	PPI
MS.gene51199	MS.gene57538	PPI
MS.gene064108	MS.gene57538	PPI
MS.gene58315	MS.gene57538	PPI
MS.gene058703	MS.gene57538	PPI
MS.gene87557	MS.gene57538	PPI
MS.gene030114	MS.gene57538	PPI
MS.gene87559	MS.gene57538	PPI
MS.gene036663	MS.gene57538	PPI
MS.gene033431	MS.gene57538	PPI
MS.gene57538	MS.gene044425	PPI
MS.gene064109	MS.gene57538	PPI
MS.gene24212	MS.gene57538	PPI
MS.gene041475	MS.gene57538	PPI
MS.gene81242	MS.gene57538	PPI
MS.gene57538	MS.gene24173	PPI
MS.gene64203	MS.gene57538	PPI
MS.gene060367	MS.gene57538	PPI
MS.gene42444	MS.gene57538	PPI
MS.gene51202	MS.gene57538	PPI
MS.gene44428	MS.gene57538	PPI
MS.gene059101	MS.gene57538	PPI
MS.gene036664	MS.gene57538	PPI
MS.gene57538	MS.gene023999	PPI
MS.gene58320	MS.gene57538	PPI
MS.gene064111	MS.gene57538	PPI
MS.gene041391	MS.gene57538	PPI
MS.gene87584	MS.gene57538	PPI
MS.gene26829	MS.gene57538	PPI
MS.gene064104	MS.gene57538	PPI
MS.gene40878	MS.gene57538	PPI
MS.gene053256	MS.gene57538	PPI
MS.gene36595	MS.gene57538	PPI
MS.gene75875	MS.gene57538	PPI
MS.gene57538	MS.gene000036	PPI
MS.gene035234	MS.gene57538	PPI
MS.gene54049	MS.gene57538	PPI
MS.gene50337	MS.gene57538	PPI
MS.gene43789	MS.gene57538	PPI
MS.gene061240	MS.gene57538	PPI
MS.gene57538	MS.gene50320	PPI
MS.gene27284	MS.gene57538	PPI
MS.gene50332	MS.gene57538	PPI
MS.gene072177	MS.gene57538	PPI
MS.gene58722	MS.gene57538	PPI
MS.gene064091	MS.gene57538	PPI
MS.gene064112	MS.gene57538	PPI
MS.gene061241	MS.gene57538	PPI
MS.gene24213	MS.gene57538	PPI
MS.gene43796	MS.gene57538	PPI
MS.gene58312	MS.gene57538	PPI
MS.gene36704	MS.gene57538	PPI
MS.gene57538	MS.gene50305	PPI
MS.gene24173	MS.gene57538	PPI
MS.gene036556	MS.gene57538	PPI
MS.gene58313	MS.gene57538	PPI
MS.gene57538	MS.gene032969	PPI
MS.gene066622	MS.gene57538	PPI
MS.gene44887	MS.gene57538	PPI
MS.gene85043	MS.gene57538	PPI
MS.gene39265	MS.gene57538	PPI
MS.gene63655	MS.gene57538	PPI
MS.gene033430	MS.gene57538	PPI
MS.gene57538	MS.gene42445	PPI
MS.gene44883	MS.gene57538	PPI
MS.gene57538	MS.gene22715	PPI
MS.gene036583	MS.gene57538	PPI
MS.gene88780	MS.gene57538	PPI
MS.gene41046	MS.gene57538	PPI
MS.gene063472	MS.gene57538	PPI
MS.gene87588	MS.gene57538	PPI
MS.gene055694	MS.gene57538	PPI
MS.gene57538	MS.gene63657	PPI
MS.gene017412	MS.gene57538	PPI
MS.gene58314	MS.gene57538	PPI
MS.gene045473	MS.gene57538	PPI
MS.gene57538	MS.gene023996	PPI
MS.gene024000	MS.gene57538	PPI
MS.gene50320	MS.gene57538	PPI
MS.gene96448	MS.gene57538	PPI
MS.gene51192	MS.gene57538	PPI
MS.gene87585	MS.gene57538	PPI
MS.gene009883	MS.gene57538	PPI
MS.gene041392	MS.gene57538	PPI
MS.gene42445	MS.gene57538	PPI
MS.gene58317	MS.gene57538	PPI
MS.gene58240	MS.gene57538	PPI
MS.gene044563	MS.gene57538	PPI
MS.gene069075	MS.gene57538	PPI
MS.gene033427	MS.gene57538	PPI
MS.gene40985	MS.gene57538	PPI
MS.gene031591	MS.gene57538	PPI
MS.gene57538	MS.gene035234	PPI
MS.gene041474	MS.gene57538	PPI
MS.gene50301	MS.gene57538	PPI
MS.gene58321	MS.gene57538	PPI
MS.gene041388	MS.gene57538	PPI
MS.gene062698	MS.gene57538	PPI
MS.gene57536	MS.gene57538	PPI
MS.gene96126	MS.gene57538	PPI
MS.gene019503	MS.gene57538	PPI
MS.gene016524	MS.gene57538	PPI
MS.gene50304	MS.gene57538	PPI
MS.gene041473	MS.gene57538	PPI
MS.gene50336	MS.gene57538	PPI
MS.gene009893	MS.gene57538	PPI
MS.gene59943	MS.gene57538	PPI
MS.gene31587	MS.gene57538	PPI
MS.gene036557	MS.gene57538	PPI
MS.gene041393	MS.gene57538	PPI
MS.gene033441	MS.gene57538	PPI
MS.gene063474	MS.gene57538	PPI
MS.gene048193	MS.gene57538	PPI
MS.gene023996	MS.gene57538	PPI
MS.gene063826	MS.gene57538	PPI
MS.gene57538	MS.gene27022	PPI
MS.gene84698	MS.gene57538	PPI
MS.gene44892	MS.gene57538	PPI
MS.gene009891	MS.gene57538	PPI
MS.gene58239	MS.gene57538	PPI
MS.gene023999	MS.gene57538	PPI
MS.gene066641	MS.gene57538	PPI
MS.gene57538	MS.gene024009	PPI
MS.gene57538	MS.gene036599	PPI
MS.gene024011	MS.gene57538	PPI
MS.gene000038	MS.gene57538	PPI
MS.gene57531	MS.gene57538	PPI
MS.gene67501	MS.gene57538	PPI
MS.gene90742	MS.gene57538	PPI
MS.gene57538	MS.gene006705	PPI
MS.gene39262	MS.gene57538	PPI
MS.gene58241	MS.gene57538	PPI
MS.gene57535	MS.gene57538	PPI
MS.gene025887	MS.gene57538	PPI
MS.gene019507	MS.gene57538	PPI
MS.gene045474	MS.gene57538	PPI
MS.gene041470	MS.gene57538	PPI
MS.gene058694	MS.gene57538	PPI
MS.gene064090	MS.gene57538	PPI
MS.gene024979	MS.gene57538	PPI
MS.gene57538	MS.gene38220	PPI
MS.gene058701	MS.gene57538	PPI
MS.gene058989	MS.gene57538	PPI
MS.gene032969	MS.gene57538	PPI
MS.gene000036	MS.gene57538	PPI
MS.gene015089	MS.gene57538	PPI
MS.gene006710	MS.gene57538	PPI
MS.gene90743	MS.gene57538	PPI
MS.gene44885	MS.gene57538	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57538.t1	MTR_8g433030	72.316	177	40	3	2	171	163	337	1.67e-83	250
MS.gene57538.t1	MTR_8g032390	72.316	177	40	3	2	171	196	370	4.03e-83	250
MS.gene57538.t1	MTR_8g433040	67.956	181	41	3	2	176	195	364	8.89e-78	236
MS.gene57538.t1	MTR_8g032380	67.956	181	41	3	2	176	195	364	8.89e-78	236
MS.gene57538.t1	MTR_6g060650	56.522	184	63	8	2	175	196	372	1.64e-56	182
MS.gene57538.t1	MTR_3g103020	55.851	188	65	8	2	176	196	378	2.90e-54	176
MS.gene57538.t1	MTR_4g094365	54.595	185	70	6	2	176	184	364	3.43e-52	171
MS.gene57538.t1	MTR_4g023130	53.226	186	65	8	2	175	137	312	1.12e-51	168
MS.gene57538.t1	MTR_4g109280	52.151	186	72	8	2	176	180	359	1.97e-51	169
MS.gene57538.t1	MTR_4g116320	54.396	182	68	7	1	172	78	254	8.76e-51	164
MS.gene57538.t1	MTR_4g023080	52.151	186	67	8	2	175	178	353	1.25e-49	164
MS.gene57538.t1	MTR_4g117720	54.688	192	63	10	2	176	194	378	4.85e-49	163
MS.gene57538.t1	MTR_4g122850	54.255	188	72	8	5	182	187	370	1.17e-48	162
MS.gene57538.t1	MTR_4g023070	49.246	199	66	8	2	175	181	369	3.90e-47	158
MS.gene57538.t1	MTR_4g021785	51.630	184	76	9	1	176	177	355	5.86e-47	157
MS.gene57538.t1	MTR_4g023090	50.251	199	69	9	2	176	194	386	8.44e-47	157
MS.gene57538.t1	MTR_4g109270	50.000	184	76	8	4	176	186	364	4.19e-46	155
MS.gene57538.t1	MTR_8g040935	48.936	188	82	6	1	176	23	208	1.20e-45	149
MS.gene57538.t1	MTR_3g034180	52.601	173	68	7	12	176	323	489	1.92e-45	156
MS.gene57538.t1	MTR_4g023380	49.275	207	67	10	2	176	179	379	1.11e-44	152
MS.gene57538.t1	MTR_6g463430	50.000	184	76	7	2	176	26	202	1.20e-44	147
MS.gene57538.t1	MTR_5g097210	50.267	187	73	7	15	185	190	372	1.68e-44	151
MS.gene57538.t1	MTR_4g116330	48.925	186	80	6	2	176	199	380	4.75e-44	150
MS.gene57538.t1	MTR_4g023190	50.267	187	70	7	2	174	180	357	1.31e-43	148
MS.gene57538.t1	MTR_4g023120	47.449	196	76	7	2	176	181	370	1.55e-43	149
MS.gene57538.t1	MTR_3g034160	50.526	190	71	9	2	175	192	374	2.16e-43	148
MS.gene57538.t1	MTR_4g117850	48.925	186	78	8	1	173	195	376	1.18e-42	146
MS.gene57538.t1	MTR_4g023150	50.000	188	70	8	2	174	180	358	5.84e-41	141
MS.gene57538.t1	MTR_4g023200	47.594	187	76	7	2	174	180	358	5.91e-40	139
MS.gene57538.t1	MTR_4g118380	53.614	166	51	9	2	149	198	355	8.58e-40	138
MS.gene57538.t1	MTR_3g034130	50.932	161	64	7	12	163	209	363	3.99e-39	137
MS.gene57538.t1	MTR_1g055175	45.026	191	79	7	2	175	19	200	3.80e-38	130
MS.gene57538.t1	MTR_5g070130	47.716	197	84	10	2	181	188	382	1.19e-37	134
MS.gene57538.t1	MTR_5g070080	47.312	186	82	9	2	176	206	386	2.48e-35	127
MS.gene57538.t1	MTR_1g055165	49.045	157	69	5	28	175	163	317	7.67e-35	125
MS.gene57538.t1	MTR_1g055195	49.398	166	70	8	27	182	323	484	5.34e-34	125
MS.gene57538.t1	MTR_4g117780	46.032	189	83	10	2	176	184	367	2.54e-33	122
MS.gene57538.t1	MTR_1g055135	49.689	161	65	7	28	175	217	374	2.68e-32	119
MS.gene57538.t1	MTR_4g118370	43.548	186	67	9	1	173	97	257	8.62e-32	115
MS.gene57538.t1	MTR_4g118400	47.222	180	64	11	1	169	134	293	5.36e-31	114
MS.gene57538.t1	MTR_4g117770	46.032	189	83	10	2	176	184	367	6.52e-31	115
MS.gene57538.t1	MTR_4g117810	46.032	189	83	10	2	176	184	367	6.52e-31	115
MS.gene57538.t1	MTR_4g117870	51.562	128	53	4	57	176	141	267	5.81e-30	110
MS.gene57538.t1	MTR_1g055250	41.206	199	96	11	1	185	87	278	1.61e-29	111
MS.gene57538.t1	MTR_4g121580	43.787	169	60	6	4	166	200	339	3.20e-29	111
MS.gene57538.t1	MTR_7g079400	42.408	191	90	8	2	176	151	337	7.66e-29	109
MS.gene57538.t1	MTR_5g070088	44.211	190	86	10	1	176	203	386	8.39e-28	107
MS.gene57538.t1	MTR_8g102520	39.572	187	97	8	2	176	140	322	1.83e-27	105
MS.gene57538.t1	MTR_4g117750	42.408	191	83	8	13	180	177	363	7.47e-26	103
MS.gene57538.t1	MTR_4g117750	51.376	109	44	4	75	174	373	481	3.81e-22	92.8
MS.gene57538.t1	MTR_4g023440	42.077	183	55	8	2	176	193	332	3.16e-25	99.8
MS.gene57538.t1	MTR_4g118360	47.656	128	52	6	60	175	1	125	7.15e-25	94.0
MS.gene57538.t1	MTR_7g079370	40.223	179	92	8	2	169	175	349	8.10e-25	99.4
MS.gene57538.t1	MTR_8g098830	42.675	157	76	8	2	149	45	196	2.09e-24	95.5
MS.gene57538.t1	MTR_4g122860	39.362	188	72	9	2	176	162	320	3.38e-24	97.4
MS.gene57538.t1	MTR_7g079420	41.899	179	82	10	12	174	971	1143	1.77e-23	97.1
MS.gene57538.t1	MTR_5g023000	55.102	98	35	4	88	176	2	99	3.16e-22	86.3
MS.gene57538.t1	MTR_4g117530	38.043	184	68	8	2	176	107	253	5.97e-22	89.7
MS.gene57538.t1	MTR_4g116330	36.022	186	65	6	2	176	199	341	3.91e-20	86.3
MS.gene57538.t1	MTR_2g048580	37.363	182	100	9	2	176	168	342	7.10e-20	85.5
MS.gene57538.t1	MTR_8g013010	54.217	83	30	3	2	84	235	309	2.08e-18	81.3
MS.gene57538.t1	MTR_4g117430	53.012	83	34	3	2	84	75	152	5.10e-18	77.0
MS.gene57538.t1	MTR_4g122840	40.310	129	46	4	51	176	164	264	1.60e-15	72.8
MS.gene57538.t1	MTR_4g023430	42.857	105	46	5	85	176	119	222	8.01e-13	64.7
MS.gene57538.t1	MTR_1g055145	54.930	71	29	3	28	98	132	199	2.23e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 41 sgRNAs with CRISPR-Local

Find 48 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATTGTTGTCTTTGATTTAA+TGG	0.084690	8.3:-62193677	MS.gene57538:CDS
GACCATGATCCTATGTATTA+TGG	0.204606	8.3:-62193616	MS.gene57538:CDS
TATTATGGTTTGTGGGTATT+TGG	0.218240	8.3:-62193601	MS.gene57538:CDS
ATAATTGGACGGTTGAAATA+TGG	0.285135	8.3:-62193546	MS.gene57538:CDS
TTGGAGAATTTCTCAGTCTA+TGG	0.288501	8.3:-62193582	MS.gene57538:CDS
TAATCCTGCTCTAGAAGCTT+TGG	0.343636	8.3:+62193759	None:intergenic
TCTTCAATGGGGCTATTCAT+TGG	0.385937	8.3:-62193735	MS.gene57538:CDS
CAATGGGGCTATTCATTGGT+TGG	0.407106	8.3:-62193731	MS.gene57538:CDS
AATCCTGCTCTAGAAGCTTT+GGG	0.420953	8.3:+62193760	None:intergenic
AGAGCAGGATTATTCTTCAA+TGG	0.421802	8.3:-62193748	MS.gene57538:CDS
GAGCAGGATTATTCTTCAAT+GGG	0.421969	8.3:-62193747	MS.gene57538:CDS
ATGGCAACTTCAGATGCCTT+TGG	0.428120	8.3:+62193355	None:intergenic
AATTTCTCAGTCTATGGAAT+AGG	0.433887	8.3:-62193576	MS.gene57538:CDS
GGATCATGGTCGAAATCATC+TGG	0.438205	8.3:+62193628	None:intergenic
GAGTCTATGCTTTCACTCTC+CGG	0.448136	8.3:-62193325	MS.gene57538:CDS
ATCCTATGTATTATGGTTTG+TGG	0.452973	8.3:-62193609	MS.gene57538:CDS
TAATTGGACGGTTGAAATAT+GGG	0.484830	8.3:-62193545	MS.gene57538:CDS
AATACAAACAACATTCGTCT+TGG	0.508117	8.3:-62193516	MS.gene57538:CDS
GGTATTCATATAAGTGAAGC+GGG	0.509050	8.3:+62193792	None:intergenic
TCCTATGTATTATGGTTTGT+GGG	0.509991	8.3:-62193608	MS.gene57538:CDS
TATCCCAAAGCTTCTAGAGC+AGG	0.512637	8.3:-62193763	MS.gene57538:CDS
TTGTCTTTGATTTAATGGAA+AGG	0.526787	8.3:-62193672	MS.gene57538:CDS
AACCATAATACATAGGATCA+TGG	0.533187	8.3:+62193614	None:intergenic
GTAAACTTGCTCACGGTCAC+CGG	0.538352	8.3:+62193306	None:intergenic
AAAAGTGGTGATGGTGGTCA+TGG	0.546744	8.3:-62193430	MS.gene57538:CDS
AATATGTGGTATGAAATTGA+AGG	0.563922	8.3:-62193817	MS.gene57538:CDS
CTGTGGATAATGACATACCT+TGG	0.573000	8.3:-62193474	MS.gene57538:CDS
TGGTGATGGTGGTCATGGAT+TGG	0.576786	8.3:-62193425	MS.gene57538:CDS
CAAGGTATGTCATTATCCAC+AGG	0.577768	8.3:+62193475	None:intergenic
TGGTCGAAATCATCTGGAAG+AGG	0.577796	8.3:+62193634	None:intergenic
CCATCTTGTAAACTTGCTCA+CGG	0.588651	8.3:+62193299	None:intergenic
GTATCTTGAAATAGATCCAA+AGG	0.594270	8.3:-62193371	MS.gene57538:CDS
TAAATCTCTTGTAATTCCTG+TGG	0.594688	8.3:-62193491	MS.gene57538:CDS
AAGCATAGACTCTTTATACA+TGG	0.617292	8.3:+62193336	None:intergenic
TGGTATTCATATAAGTGAAG+CGG	0.623775	8.3:+62193791	None:intergenic
ACCCACAAACCATAATACAT+AGG	0.624621	8.3:+62193607	None:intergenic
AGAAGCTTTGGGATAATGCG+TGG	0.645032	8.3:+62193771	None:intergenic
CCGTGAGCAAGTTTACAAGA+TGG	0.648413	8.3:-62193299	MS.gene57538:CDS
AGCAGGATTATTCTTCAATG+GGG	0.698376	8.3:-62193746	MS.gene57538:CDS
GAGTATATAGGGGAAAACCA+AGG	0.732405	8.3:+62193457	None:intergenic
GTATTCATATAAGTGAAGCG+GGG	0.742587	8.3:+62193793	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATTGTTGTCTTTGATTTAA+TGG	-	chr8.3:62193416-62193435	MS.gene57538:CDS	20.0%
!!	ACTTTTTGTAGAGTATATAG+GGG	+	chr8.3:62193649-62193668	None:intergenic	25.0%
!!	TTGTCTTTGATTTAATGGAA+AGG	-	chr8.3:62193421-62193440	MS.gene57538:CDS	25.0%
!!!	CACTTTTTGTAGAGTATATA+GGG	+	chr8.3:62193650-62193669	None:intergenic	25.0%
!!!	GGAATAGGAATTTTGATAAT+TGG	-	chr8.3:62193532-62193551	MS.gene57538:CDS	25.0%
!!!	TAGGAATTTTGATAATTGGA+CGG	-	chr8.3:62193536-62193555	MS.gene57538:CDS	25.0%
	AACCATAATACATAGGATCA+TGG	+	chr8.3:62193482-62193501	None:intergenic	30.0%
	AAGCATAGACTCTTTATACA+TGG	+	chr8.3:62193760-62193779	None:intergenic	30.0%
	AATACAAACAACATTCGTCT+TGG	-	chr8.3:62193577-62193596	MS.gene57538:CDS	30.0%
	AATTTCTCAGTCTATGGAAT+AGG	-	chr8.3:62193517-62193536	MS.gene57538:CDS	30.0%
	ATAATTGGACGGTTGAAATA+TGG	-	chr8.3:62193547-62193566	MS.gene57538:CDS	30.0%
	ATCCTATGTATTATGGTTTG+TGG	-	chr8.3:62193484-62193503	MS.gene57538:CDS	30.0%
	CCTATATACTCTACAAAAAG+TGG	-	chr8.3:62193648-62193667	MS.gene57538:CDS	30.0%
	GTATCTTGAAATAGATCCAA+AGG	-	chr8.3:62193722-62193741	MS.gene57538:CDS	30.0%
	TAAATCTCTTGTAATTCCTG+TGG	-	chr8.3:62193602-62193621	MS.gene57538:CDS	30.0%
	TAATTGGACGGTTGAAATAT+GGG	-	chr8.3:62193548-62193567	MS.gene57538:CDS	30.0%
	TGGTATTCATATAAGTGAAG+CGG	+	chr8.3:62193305-62193324	None:intergenic	30.0%
!	TATTATGGTTTGTGGGTATT+TGG	-	chr8.3:62193492-62193511	MS.gene57538:CDS	30.0%
!	TCCTATGTATTATGGTTTGT+GGG	-	chr8.3:62193485-62193504	MS.gene57538:CDS	30.0%
!!!	CCACTTTTTGTAGAGTATAT+AGG	+	chr8.3:62193651-62193670	None:intergenic	30.0%
	ACCCACAAACCATAATACAT+AGG	+	chr8.3:62193489-62193508	None:intergenic	35.0%
	AGAGCAGGATTATTCTTCAA+TGG	-	chr8.3:62193345-62193364	MS.gene57538:CDS	35.0%
	AGCAGGATTATTCTTCAATG+GGG	-	chr8.3:62193347-62193366	MS.gene57538:CDS	35.0%
	GACCATGATCCTATGTATTA+TGG	-	chr8.3:62193477-62193496	MS.gene57538:CDS	35.0%
	GAGCAGGATTATTCTTCAAT+GGG	-	chr8.3:62193346-62193365	MS.gene57538:CDS	35.0%
	GGTATTCATATAAGTGAAGC+GGG	+	chr8.3:62193304-62193323	None:intergenic	35.0%
	GTATTCATATAAGTGAAGCG+GGG	+	chr8.3:62193303-62193322	None:intergenic	35.0%
	TACTCTACAAAAAGTGGTGA+TGG	-	chr8.3:62193654-62193673	MS.gene57538:CDS	35.0%
	TTGGAGAATTTCTCAGTCTA+TGG	-	chr8.3:62193511-62193530	MS.gene57538:CDS	35.0%
	CAAGGTATGTCATTATCCAC+AGG	+	chr8.3:62193621-62193640	None:intergenic	40.0%
	CTGTGGATAATGACATACCT+TGG	-	chr8.3:62193619-62193638	MS.gene57538:CDS	40.0%
	GAGTATATAGGGGAAAACCA+AGG	+	chr8.3:62193639-62193658	None:intergenic	40.0%
	TCTTCAATGGGGCTATTCAT+TGG	-	chr8.3:62193358-62193377	MS.gene57538:CDS	40.0%
!	CCATCTTGTAAACTTGCTCA+CGG	+	chr8.3:62193797-62193816	None:intergenic	40.0%
!!	AATCCTGCTCTAGAAGCTTT+GGG	+	chr8.3:62193336-62193355	None:intergenic	40.0%
!!	TAATCCTGCTCTAGAAGCTT+TGG	+	chr8.3:62193337-62193356	None:intergenic	40.0%
!!	TCTACAAAAAGTGGTGATGG+TGG	-	chr8.3:62193657-62193676	MS.gene57538:CDS	40.0%
	ATGGCAACTTCAGATGCCTT+TGG	+	chr8.3:62193741-62193760	None:intergenic	45.0%
	CAATGGGGCTATTCATTGGT+TGG	-	chr8.3:62193362-62193381	MS.gene57538:CDS	45.0%
	CCGTGAGCAAGTTTACAAGA+TGG	-	chr8.3:62193794-62193813	MS.gene57538:CDS	45.0%
	GAGTCTATGCTTTCACTCTC+CGG	-	chr8.3:62193768-62193787	MS.gene57538:CDS	45.0%
	GGATCATGGTCGAAATCATC+TGG	+	chr8.3:62193468-62193487	None:intergenic	45.0%
	TGGTCGAAATCATCTGGAAG+AGG	+	chr8.3:62193462-62193481	None:intergenic	45.0%
!!	AAAAGTGGTGATGGTGGTCA+TGG	-	chr8.3:62193663-62193682	MS.gene57538:CDS	45.0%
!!	AGAAGCTTTGGGATAATGCG+TGG	+	chr8.3:62193325-62193344	None:intergenic	45.0%
!!	TATCCCAAAGCTTCTAGAGC+AGG	-	chr8.3:62193330-62193349	MS.gene57538:CDS	45.0%
!	GTAAACTTGCTCACGGTCAC+CGG	+	chr8.3:62193790-62193809	None:intergenic	50.0%
!!	TGGTGATGGTGGTCATGGAT+TGG	-	chr8.3:62193668-62193687	MS.gene57538:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	62193279	62193836	62193279	ID=MS.gene57538
chr8.3	mRNA	62193279	62193836	62193279	ID=MS.gene57538.t1;Parent=MS.gene57538
chr8.3	exon	62193279	62193836	62193279	ID=MS.gene57538.t1.exon1;Parent=MS.gene57538.t1
chr8.3	CDS	62193279	62193836	62193279	ID=cds.MS.gene57538.t1;Parent=MS.gene57538.t1

Gene Sequence

>MS.gene57538

ATGTGGTATGAAATTGAAGGTCCCCGCTTCACTTATATGAATACCACGCATTATCCCAAAGCTTCTAGAGCAGGATTATTCTTCAATGGGGCTATTCATTGGTTGGCTTCTCGTTATCATGATATGCGAGTGAAAGTTATTGTTGTCTTTGATTTAATGGAAAGGAAACTGTTAGAGATACCTCTTCCAGATGATTTCGACCATGATCCTATGTATTATGGTTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGAATAGGAATTTTGATAATTGGACGGTTGAAATATGGGTGATGAAATACAAACAACATTCGTCTTGGACTAAATCTCTTGTAATTCCTGTGGATAATGACATACCTTGGTTTTCCCCTATATACTCTACAAAAAGTGGTGATGGTGGTCATGGATTGGTGAAGTATAATAACAAAAGTCAACTGTTAGAGTATCTTGAAATAGATCCAAAGGCATCTGAAGTTGCCATGTATAAAGAGTCTATGCTTTCACTCTCCGGTGACCGTGAGCAAGTTTACAAGATGGCAAAAAATCACGAAGAATGA

Protein sequence

>MS.gene57538.t1

MWYEIEGPRFTYMNTTHYPKASRAGLFFNGAIHWLASRYHDMRVKVIVVFDLMERKLLEIPLPDDFDHDPMYYGLWVFGEFLSLWNRNFDNWTVEIWVMKYKQHSSWTKSLVIPVDNDIPWFSPIYSTKSGDGGHGLVKYNNKSQLLEYLEIDPKASEVAMYKESMLSLSGDREQVYKMAKNHEE