AlfalfaGEDB | MS.gene033079

M. sativa cultivar XinJiangDaYe / MS.gene033079

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene033079.t1	KEH31985.1	61.5	192	68	4	10	195	173	364	8.30E-56	226.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene033079.t1	Q8GXC7	28.3	184	118	4	12	187	242	419	7.0e-11	68.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene033079.t1	A0A072V1J3	61.5	192	68	4	10	195	173	364	6.0e-56	226.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene033079	MS.gene058989	PPI
MS.gene57529	MS.gene033079	PPI
MS.gene033079	MS.gene57538	PPI
MS.gene033079	MS.gene041468	PPI
MS.gene033079	MS.gene058693	PPI
MS.gene033079	MS.gene041395	PPI
MS.gene033079	MS.gene42447	PPI
MS.gene033079	MS.gene51189	PPI
MS.gene40886	MS.gene033079	PPI
MS.gene40902	MS.gene033079	PPI
MS.gene27051	MS.gene033079	PPI
MS.gene021553	MS.gene033079	PPI
MS.gene033079	MS.gene044425	PPI
MS.gene060368	MS.gene033079	PPI
MS.gene033875	MS.gene033079	PPI
MS.gene036582	MS.gene033079	PPI
MS.gene27021	MS.gene033079	PPI
MS.gene066620	MS.gene033079	PPI
MS.gene035236	MS.gene033079	PPI
MS.gene033079	MS.gene40988	PPI
MS.gene033079	MS.gene59637	PPI
MS.gene033079	MS.gene24173	PPI
MS.gene059157	MS.gene033079	PPI
MS.gene58781	MS.gene033079	PPI
MS.gene57717	MS.gene033079	PPI
MS.gene028390	MS.gene033079	PPI
MS.gene011106	MS.gene033079	PPI
MS.gene033440	MS.gene033079	PPI
MS.gene033079	MS.gene27022	PPI
MS.gene62398	MS.gene033079	PPI
MS.gene60027	MS.gene033079	PPI
MS.gene038756	MS.gene033079	PPI
MS.gene88776	MS.gene033079	PPI
MS.gene033079	MS.gene87585	PPI
MS.gene35068	MS.gene033079	PPI
MS.gene033079	MS.gene023999	PPI
MS.gene041390	MS.gene033079	PPI
MS.gene24286	MS.gene033079	PPI
MS.gene92376	MS.gene033079	PPI
MS.gene000035	MS.gene033079	PPI
MS.gene50329	MS.gene033079	PPI
MS.gene070462	MS.gene033079	PPI
MS.gene31637	MS.gene033079	PPI
MS.gene87573	MS.gene033079	PPI
MS.gene033079	MS.gene036581	PPI
MS.gene033079	MS.gene035237	PPI
MS.gene57537	MS.gene033079	PPI
MS.gene019504	MS.gene033079	PPI
MS.gene034762	MS.gene033079	PPI
MS.gene059156	MS.gene033079	PPI
MS.gene033079	MS.gene000036	PPI
MS.gene033079	MS.gene50320	PPI
MS.gene033079	MS.gene87557	PPI
MS.gene033079	MS.gene035263	PPI
MS.gene58716	MS.gene033079	PPI
MS.gene68580	MS.gene033079	PPI
MS.gene033444	MS.gene033079	PPI
MS.gene019505	MS.gene033079	PPI
MS.gene50306	MS.gene033079	PPI
MS.gene033079	MS.gene053257	PPI
MS.gene58785	MS.gene033079	PPI
MS.gene033079	MS.gene51201	PPI
MS.gene066639	MS.gene033079	PPI
MS.gene033079	MS.gene009893	PPI
MS.gene26949	MS.gene033079	PPI
MS.gene033079	MS.gene50336	PPI
MS.gene50309	MS.gene033079	PPI
MS.gene036760	MS.gene033079	PPI
MS.gene033079	MS.gene77704	PPI
MS.gene58311	MS.gene033079	PPI
MS.gene57527	MS.gene033079	PPI
MS.gene033432	MS.gene033079	PPI
MS.gene033079	MS.gene047279	PPI
MS.gene033079	MS.gene50305	PPI
MS.gene033426	MS.gene033079	PPI
MS.gene59639	MS.gene033079	PPI
MS.gene033079	MS.gene68890	PPI
MS.gene50327	MS.gene033079	PPI
MS.gene035261	MS.gene033079	PPI
MS.gene033079	MS.gene86273	PPI
MS.gene033079	MS.gene036663	PPI
MS.gene033079	MS.gene68580	PPI
MS.gene010758	MS.gene033079	PPI
MS.gene063670	MS.gene033079	PPI
MS.gene033079	MS.gene63657	PPI
MS.gene57530	MS.gene033079	PPI
MS.gene033079	MS.gene059157	PPI
MS.gene066626	MS.gene033079	PPI
MS.gene033079	MS.gene023996	PPI
MS.gene019506	MS.gene033079	PPI
MS.gene033079	MS.gene030114	PPI
MS.gene50326	MS.gene033079	PPI
MS.gene033079	MS.gene045473	PPI
MS.gene51200	MS.gene033079	PPI
MS.gene033079	MS.gene50301	PPI
MS.gene033079	MS.gene070462	PPI
MS.gene033079	MS.gene031590	PPI
MS.gene024002	MS.gene033079	PPI
MS.gene88774	MS.gene033079	PPI
MS.gene033079	MS.gene066623	PPI
MS.gene033079	MS.gene064086	PPI
MS.gene034686	MS.gene033079	PPI
MS.gene033079	MS.gene064090	PPI
MS.gene40982	MS.gene033079	PPI
MS.gene42452	MS.gene033079	PPI
MS.gene063414	MS.gene033079	PPI
MS.gene033079	MS.gene90742	PPI
MS.gene033079	MS.gene24212	PPI
MS.gene033079	MS.gene50332	PPI
MS.gene033079	MS.gene024979	PPI
MS.gene036662	MS.gene033079	PPI
MS.gene87563	MS.gene033079	PPI
MS.gene57526	MS.gene033079	PPI
MS.gene24212	MS.gene033079	PPI
MS.gene033079	MS.gene24826	PPI
MS.gene033079	MS.gene063472	PPI
MS.gene033079	MS.gene43790	PPI
MS.gene051820	MS.gene033079	PPI
MS.gene26957	MS.gene033079	PPI
MS.gene97996	MS.gene033079	PPI
MS.gene035235	MS.gene033079	PPI
MS.gene58320	MS.gene033079	PPI
MS.gene81242	MS.gene033079	PPI
MS.gene26101	MS.gene033079	PPI
MS.gene27283	MS.gene033079	PPI
MS.gene64203	MS.gene033079	PPI
MS.gene045140	MS.gene033079	PPI
MS.gene024004	MS.gene033079	PPI
MS.gene42444	MS.gene033079	PPI
MS.gene51202	MS.gene033079	PPI
MS.gene033079	MS.gene88416	PPI
MS.gene059101	MS.gene033079	PPI
MS.gene44886	MS.gene033079	PPI
MS.gene87562	MS.gene033079	PPI
MS.gene066623	MS.gene033079	PPI
MS.gene033079	MS.gene003076	PPI
MS.gene40904	MS.gene033079	PPI
MS.gene033079	MS.gene024009	PPI
MS.gene033079	MS.gene036599	PPI
MS.gene033079	MS.gene009892	PPI
MS.gene87569	MS.gene033079	PPI
MS.gene064104	MS.gene033079	PPI
MS.gene033079	MS.gene006705	PPI
MS.gene033079	MS.gene061241	PPI
MS.gene041491	MS.gene033079	PPI
MS.gene033079	MS.gene51188	PPI
MS.gene033443	MS.gene033079	PPI
MS.gene50337	MS.gene033079	PPI
MS.gene059096	MS.gene033079	PPI
MS.gene57528	MS.gene033079	PPI
MS.gene50297	MS.gene033079	PPI
MS.gene033079	MS.gene38220	PPI
MS.gene033079	MS.gene40986	PPI
MS.gene006711	MS.gene033079	PPI
MS.gene033079	MS.gene041394	PPI
MS.gene27285	MS.gene033079	PPI
MS.gene064091	MS.gene033079	PPI
MS.gene033079	MS.gene03060	PPI
MS.gene064112	MS.gene033079	PPI
MS.gene033079	MS.gene036664	PPI
MS.gene033079	MS.gene024011	PPI
MS.gene045476	MS.gene033079	PPI
MS.gene033079	MS.gene58241	PPI
MS.gene24208	MS.gene033079	PPI
MS.gene50307	MS.gene033079	PPI
MS.gene033079	MS.gene064109	PPI
MS.gene034690	MS.gene033079	PPI
MS.gene033079	MS.gene058696	PPI
MS.gene044429	MS.gene033079	PPI
MS.gene96407	MS.gene033079	PPI
MS.gene77857	MS.gene033079	PPI
MS.gene51191	MS.gene033079	PPI
MS.gene033430	MS.gene033079	PPI
MS.gene50298	MS.gene033079	PPI
MS.gene033079	MS.gene40886	PPI
MS.gene67687	MS.gene033079	PPI
MS.gene036583	MS.gene033079	PPI
MS.gene055694	MS.gene033079	PPI
MS.gene033079	MS.gene041391	PPI
MS.gene033079	MS.gene57525	PPI
MS.gene71159	MS.gene033079	PPI
MS.gene96448	MS.gene033079	PPI
MS.gene77858	MS.gene033079	PPI
MS.gene058692	MS.gene033079	PPI
MS.gene041392	MS.gene033079	PPI
MS.gene033083	MS.gene033079	PPI
MS.gene033079	MS.gene045474	PPI
MS.gene033079	MS.gene058701	PPI
MS.gene69309	MS.gene033079	PPI
MS.gene033079	MS.gene036558	PPI
MS.gene63658	MS.gene033079	PPI
MS.gene033081	MS.gene033079	PPI
MS.gene033079	MS.gene87554	PPI
MS.gene033079	MS.gene40984	PPI
MS.gene031591	MS.gene033079	PPI
MS.gene033079	MS.gene064108	PPI
MS.gene033079	MS.gene048193	PPI
MS.gene035262	MS.gene033079	PPI
MS.gene033079	MS.gene016220	PPI
MS.gene070461	MS.gene033079	PPI
MS.gene51199	MS.gene033079	PPI
MS.gene87559	MS.gene033079	PPI
MS.gene033079	MS.gene58240	PPI
MS.gene033431	MS.gene033079	PPI
MS.gene033079	MS.gene27284	PPI
MS.gene033079	MS.gene57717	PPI
MS.gene033079	MS.gene034680	PPI
MS.gene041475	MS.gene033079	PPI
MS.gene033441	MS.gene033079	PPI
MS.gene033079	MS.gene48221	PPI
MS.gene033079	MS.gene066626	PPI
MS.gene063826	MS.gene033079	PPI
MS.gene060367	MS.gene033079	PPI
MS.gene033079	MS.gene063474	PPI
MS.gene033079	MS.gene51190	PPI
MS.gene44892	MS.gene033079	PPI
MS.gene033079	MS.gene58319	PPI
MS.gene033079	MS.gene044426	PPI
MS.gene033079	MS.gene034681	PPI
MS.gene033079	MS.gene57532	PPI
MS.gene033079	MS.gene033442	PPI
MS.gene57531	MS.gene033079	PPI
MS.gene064111	MS.gene033079	PPI
MS.gene26829	MS.gene033079	PPI
MS.gene39262	MS.gene033079	PPI
MS.gene053256	MS.gene033079	PPI
MS.gene033079	MS.gene44428	PPI
MS.gene033079	MS.gene058669	PPI
MS.gene75875	MS.gene033079	PPI
MS.gene033079	MS.gene066120	PPI
MS.gene058694	MS.gene033079	PPI
MS.gene064090	MS.gene033079	PPI
MS.gene54049	MS.gene033079	PPI
MS.gene43789	MS.gene033079	PPI
MS.gene033079	MS.gene035235	PPI
MS.gene033079	MS.gene041489	PPI
MS.gene006710	MS.gene033079	PPI
MS.gene033079	MS.gene024000	PPI
MS.gene033079	MS.gene034688	PPI
MS.gene072177	MS.gene033079	PPI
MS.gene58722	MS.gene033079	PPI
MS.gene033079	MS.gene24213	PPI
MS.gene033079	MS.gene034677	PPI
MS.gene24213	MS.gene033079	PPI
MS.gene64001	MS.gene033079	PPI
MS.gene43796	MS.gene033079	PPI
MS.gene033079	MS.gene055694	PPI
MS.gene033079	MS.gene059101	PPI
MS.gene033079	MS.gene035238	PPI
MS.gene033079	MS.gene58316	PPI
MS.gene58312	MS.gene033079	PPI
MS.gene36704	MS.gene033079	PPI
MS.gene033079	MS.gene064114	PPI
MS.gene032970	MS.gene033079	PPI
MS.gene033079	MS.gene87584	PPI
MS.gene77856	MS.gene033079	PPI
MS.gene033079	MS.gene58315	PPI
MS.gene036556	MS.gene033079	PPI
MS.gene033079	MS.gene80610	PPI
MS.gene58313	MS.gene033079	PPI
MS.gene066622	MS.gene033079	PPI
MS.gene44887	MS.gene033079	PPI
MS.gene85043	MS.gene033079	PPI
MS.gene033079	MS.gene90743	PPI
MS.gene39265	MS.gene033079	PPI
MS.gene51188	MS.gene033079	PPI
MS.gene63655	MS.gene033079	PPI
MS.gene44883	MS.gene033079	PPI
MS.gene033079	MS.gene85454	PPI
MS.gene88780	MS.gene033079	PPI
MS.gene033079	MS.gene036556	PPI
MS.gene41046	MS.gene033079	PPI
MS.gene87588	MS.gene033079	PPI
MS.gene017412	MS.gene033079	PPI
MS.gene033079	MS.gene27319	PPI
MS.gene80884	MS.gene033079	PPI
MS.gene51192	MS.gene033079	PPI
MS.gene009883	MS.gene033079	PPI
MS.gene58317	MS.gene033079	PPI
MS.gene044563	MS.gene033079	PPI
MS.gene069075	MS.gene033079	PPI
MS.gene033427	MS.gene033079	PPI
MS.gene033079	MS.gene064083	PPI
MS.gene40985	MS.gene033079	PPI
MS.gene041474	MS.gene033079	PPI
MS.gene27020	MS.gene033079	PPI
MS.gene033079	MS.gene58783	PPI
MS.gene033079	MS.gene024420	PPI
MS.gene033079	MS.gene024008	PPI
MS.gene033079	MS.gene50337	PPI
MS.gene58321	MS.gene033079	PPI
MS.gene041388	MS.gene033079	PPI
MS.gene033079	MS.gene54541	PPI
MS.gene033079	MS.gene39265	PPI
MS.gene033079	MS.gene036584	PPI
MS.gene062698	MS.gene033079	PPI
MS.gene57536	MS.gene033079	PPI
MS.gene96126	MS.gene033079	PPI
MS.gene019503	MS.gene033079	PPI
MS.gene51208	MS.gene033079	PPI
MS.gene033079	MS.gene053299	PPI
MS.gene016524	MS.gene033079	PPI
MS.gene50304	MS.gene033079	PPI
MS.gene033079	MS.gene28758	PPI
MS.gene033079	MS.gene044429	PPI
MS.gene033079	MS.gene42451	PPI
MS.gene045475	MS.gene033079	PPI
MS.gene59943	MS.gene033079	PPI
MS.gene90744	MS.gene033079	PPI
MS.gene51204	MS.gene033079	PPI
MS.gene31587	MS.gene033079	PPI
MS.gene036557	MS.gene033079	PPI
MS.gene041393	MS.gene033079	PPI
MS.gene033079	MS.gene69307	PPI
MS.gene033079	MS.gene019507	PPI
MS.gene84698	MS.gene033079	PPI
MS.gene033079	MS.gene58314	PPI
MS.gene009891	MS.gene033079	PPI
MS.gene58239	MS.gene033079	PPI
MS.gene066641	MS.gene033079	PPI
MS.gene82082	MS.gene033079	PPI
MS.gene033079	MS.gene67501	PPI
MS.gene000038	MS.gene033079	PPI
MS.gene033079	MS.gene96406	PPI
MS.gene57535	MS.gene033079	PPI
MS.gene025887	MS.gene033079	PPI
MS.gene033079	MS.gene40878	PPI
MS.gene019507	MS.gene033079	PPI
MS.gene041470	MS.gene033079	PPI
MS.gene87200	MS.gene033079	PPI
MS.gene058701	MS.gene033079	PPI
MS.gene033079	MS.gene058703	PPI
MS.gene015089	MS.gene033079	PPI
MS.gene90743	MS.gene033079	PPI
MS.gene033079	MS.gene012215	PPI
MS.gene033079	MS.gene032969	PPI
MS.gene44885	MS.gene033079	PPI
MS.gene011679	MS.gene033079	PPI
MS.gene060370	MS.gene033079	PPI
MS.gene066635	MS.gene033079	PPI
MS.gene033079	MS.gene42445	PPI
MS.gene57533	MS.gene033079	PPI
MS.gene033079	MS.gene26830	PPI
MS.gene033079	MS.gene22715	PPI
MS.gene033079	MS.gene51207	PPI
MS.gene87586	MS.gene033079	PPI
MS.gene033079	MS.gene58321	PPI
MS.gene033079	MS.gene87564	PPI
MS.gene033079	MS.gene36595	PPI
MS.gene40887	MS.gene033079	PPI
MS.gene50339	MS.gene033079	PPI
MS.gene046958	MS.gene033079	PPI
MS.gene033079	MS.gene061240	PPI
MS.gene034688	MS.gene033079	PPI
MS.gene060366	MS.gene033079	PPI
MS.gene033079	MS.gene041473	PPI
MS.gene033079	MS.gene50311	PPI
MS.gene033079	MS.gene035234	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene033079.t1	MTR_4g109270	61.458	192	68	4	10	195	173	364	2.57e-70	218
MS.gene033079.t1	MTR_3g103020	56.186	194	76	5	10	195	186	378	1.89e-62	198
MS.gene033079.t1	MTR_6g060650	55.155	194	83	4	4	194	180	372	9.78e-61	193
MS.gene033079.t1	MTR_4g117720	54.592	196	78	6	10	195	184	378	1.47e-58	188
MS.gene033079.t1	MTR_4g109280	53.403	191	83	4	10	195	170	359	1.07e-57	185
MS.gene033079.t1	MTR_8g040935	50.739	203	86	6	4	195	9	208	2.44e-56	177
MS.gene033079.t1	MTR_3g034180	53.093	194	81	5	10	194	296	488	4.10e-56	184
MS.gene033079.t1	MTR_4g116330	52.041	196	80	5	10	195	189	380	4.98e-56	181
MS.gene033079.t1	MTR_3g034160	51.813	193	85	3	10	194	182	374	9.45e-54	176
MS.gene033079.t1	MTR_4g117850	54.167	192	78	5	10	192	186	376	1.45e-53	175
MS.gene033079.t1	MTR_4g122850	50.777	193	88	5	10	195	172	364	4.84e-53	174
MS.gene033079.t1	MTR_3g034130	52.486	181	77	4	10	181	182	362	1.05e-52	172
MS.gene033079.t1	MTR_4g116320	50.000	192	82	5	10	192	69	255	1.62e-51	166
MS.gene033079.t1	MTR_4g023130	53.158	190	80	6	10	194	127	312	3.36e-51	167
MS.gene033079.t1	MTR_4g023080	52.128	188	83	5	10	193	168	352	6.93e-51	167
MS.gene033079.t1	MTR_8g433030	50.794	189	87	4	7	190	150	337	2.26e-50	166
MS.gene033079.t1	MTR_8g032390	51.613	186	84	4	10	190	186	370	7.13e-50	166
MS.gene033079.t1	MTR_4g021785	50.526	190	88	4	10	195	168	355	1.64e-49	164
MS.gene033079.t1	MTR_6g463430	49.231	195	82	5	10	195	16	202	3.57e-49	159
MS.gene033079.t1	MTR_8g433040	49.738	191	80	4	10	195	185	364	1.28e-48	162
MS.gene033079.t1	MTR_8g032380	49.738	191	80	4	10	195	185	364	1.28e-48	162
MS.gene033079.t1	MTR_4g117780	48.969	194	91	4	10	195	174	367	1.54e-48	162
MS.gene033079.t1	MTR_4g117770	48.969	194	91	4	10	195	174	367	6.52e-48	160
MS.gene033079.t1	MTR_4g117810	48.969	194	91	4	10	195	174	367	6.52e-48	160
MS.gene033079.t1	MTR_4g023090	47.317	205	85	7	10	194	184	385	1.77e-47	159
MS.gene033079.t1	MTR_4g094365	47.396	192	94	4	10	195	174	364	1.13e-46	157
MS.gene033079.t1	MTR_4g023380	46.262	214	84	7	10	195	169	379	1.19e-45	155
MS.gene033079.t1	MTR_4g023200	49.215	191	86	6	11	193	171	358	2.56e-45	153
MS.gene033079.t1	MTR_4g118380	50.877	171	72	4	10	169	188	357	6.06e-45	152
MS.gene033079.t1	MTR_4g023070	45.498	211	95	6	1	194	162	369	7.31e-45	152
MS.gene033079.t1	MTR_4g023120	44.828	203	92	5	10	195	171	370	2.33e-44	151
MS.gene033079.t1	MTR_4g023190	48.438	192	87	6	10	193	170	357	6.26e-44	149
MS.gene033079.t1	MTR_1g055175	44.041	193	101	4	10	195	9	201	4.65e-43	143
MS.gene033079.t1	MTR_4g023150	48.438	192	88	6	10	193	170	358	2.15e-42	145
MS.gene033079.t1	MTR_5g070080	46.354	192	96	5	10	195	196	386	4.15e-42	145
MS.gene033079.t1	MTR_4g118400	47.120	191	87	5	1	189	116	294	4.49e-42	143
MS.gene033079.t1	MTR_5g097210	47.594	187	92	5	10	191	174	359	7.95e-42	144
MS.gene033079.t1	MTR_5g070130	45.050	202	93	9	10	195	178	377	4.61e-41	143
MS.gene033079.t1	MTR_1g055195	43.689	206	104	7	1	195	274	478	8.67e-41	144
MS.gene033079.t1	MTR_4g117530	42.347	196	82	4	1	195	88	253	1.04e-39	136
MS.gene033079.t1	MTR_4g117870	43.386	189	69	4	10	195	114	267	1.65e-39	136
MS.gene033079.t1	MTR_4g118370	41.270	189	86	6	10	192	88	257	8.77e-37	129
MS.gene033079.t1	MTR_1g055135	42.929	198	95	7	12	195	182	375	2.07e-36	130
MS.gene033079.t1	MTR_5g070088	43.750	192	98	5	10	193	194	383	6.00e-36	129
MS.gene033079.t1	MTR_1g055165	44.444	162	86	2	38	195	157	318	1.00e-35	127
MS.gene033079.t1	MTR_4g117750	41.919	198	100	6	10	194	163	358	6.93e-35	128
MS.gene033079.t1	MTR_4g117750	55.963	109	43	3	90	193	373	481	1.57e-26	105
MS.gene033079.t1	MTR_4g116330	42.487	193	64	7	10	195	189	341	1.65e-34	125
MS.gene033079.t1	MTR_7g079400	41.919	198	102	7	10	195	141	337	2.92e-34	124
MS.gene033079.t1	MTR_4g023440	41.711	187	71	4	10	195	183	332	6.93e-34	123
MS.gene033079.t1	MTR_8g102520	38.144	194	111	5	10	195	130	322	5.23e-32	117
MS.gene033079.t1	MTR_5g023000	62.366	93	33	2	105	195	7	99	1.47e-31	110
MS.gene033079.t1	MTR_1g055250	40.782	179	97	6	10	182	78	253	1.66e-31	116
MS.gene033079.t1	MTR_4g118360	53.043	115	49	3	85	195	13	126	1.02e-30	109
MS.gene033079.t1	MTR_7g079370	41.237	194	92	8	10	189	165	350	3.20e-30	114
MS.gene033079.t1	MTR_2g048580	37.306	193	106	7	10	195	158	342	4.67e-27	105
MS.gene033079.t1	MTR_4g117430	52.174	92	42	1	10	101	65	154	2.18e-24	94.0
MS.gene033079.t1	MTR_8g098830	38.788	165	87	6	10	165	35	194	3.20e-24	95.5
MS.gene033079.t1	MTR_4g122860	36.126	191	85	8	15	195	157	320	4.95e-23	94.4
MS.gene033079.t1	MTR_7g079450	41.549	142	71	5	60	195	2	137	1.11e-22	89.0
MS.gene033079.t1	MTR_7g079420	36.667	180	100	7	27	195	968	1144	1.79e-21	91.7
MS.gene033079.t1	MTR_8g013010	51.579	95	31	3	10	99	225	309	2.57e-21	89.4
MS.gene033079.t1	MTR_4g114700	33.333	183	71	5	10	186	81	218	4.51e-19	82.0
MS.gene033079.t1	MTR_6g034720	56.716	67	28	1	10	76	104	169	8.31e-18	78.2
MS.gene033079.t1	MTR_4g121580	36.646	161	67	7	10	163	186	318	1.70e-17	79.7
MS.gene033079.t1	MTR_8g013005	55.932	59	25	1	138	195	1	59	9.25e-15	66.2
MS.gene033079.t1	MTR_4g023430	50.617	81	35	3	120	195	142	222	4.52e-14	68.2
MS.gene033079.t1	MTR_7g117720	50.575	87	37	3	110	190	186	272	9.34e-13	65.5
MS.gene033079.t1	MTR_4g109290	64.151	53	18	1	144	195	136	188	2.08e-12	63.2
MS.gene033079.t1	MTR_1g094210	26.842	190	114	7	11	187	221	398	7.13e-11	60.8
MS.gene033079.t1	MTR_4g116340	50.000	56	27	1	10	65	193	247	7.95e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene033079.t1	AT3G06240	28.261	184	118	4	12	187	242	419	6.26e-12	63.9

Find 47 sgRNAs with CRISPR-Local

Find 52 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAGCTGGGTTGTTCTTTAA+TGG	0.210542	8.3:+15331963	MS.gene033079:CDS
GATTCTGGTTTGTGGGTATT+TGG	0.239819	8.3:+15332107	MS.gene033079:CDS
AAACATGAACCTTACGATTC+TGG	0.242156	8.3:+15332092	MS.gene033079:CDS
TGGGTATTTGGAGAATTTCT+TGG	0.272087	8.3:+15332119	MS.gene033079:CDS
TTATACTTCACCAATCTATT+AGG	0.281531	8.3:-15332302	None:intergenic
GGTTCATGTTTAAGCTTATA+TGG	0.295734	8.3:-15332080	None:intergenic
AAGCTGGGTTGTTCTTTAAT+GGG	0.303358	8.3:+15331964	MS.gene033079:CDS
GAGTCTCTGCTTTCACTTCC+CGG	0.311578	8.3:+15332395	MS.gene033079:CDS
ATCGTGGTGCAGCTGAAATA+TGG	0.311591	8.3:+15332153	MS.gene033079:CDS
TAATACATGGAAACAAATTC+AGG	0.328938	8.3:+15331899	MS.gene033079:CDS
AGGTCCATATGATTCGTTAT+AGG	0.333106	8.3:-15332354	None:intergenic
TTGGAGAATTTCTTGGTTTG+TGG	0.336914	8.3:+15332126	MS.gene033079:CDS
TCTTTAATGGGGCTATTCAT+TGG	0.349624	8.3:+15331976	MS.gene033079:CDS
TGGAGAATTTCTTGGTTTGT+GGG	0.354642	8.3:+15332127	MS.gene033079:CDS
ATTAAAGAACAACCCAGCTT+TGG	0.366565	8.3:-15331961	None:intergenic
TCTGTATACACGGCCACTTC+AGG	0.389246	8.3:-15332374	None:intergenic
TTAAAGAACAACCCAGCTTT+GGG	0.389953	8.3:-15331960	None:intergenic
ACCTTACGATTCTGGTTTGT+GGG	0.398636	8.3:+15332100	MS.gene033079:CDS
TGCAGAGCATAAAGGAGAAA+AGG	0.417056	8.3:-15332249	None:intergenic
TAATGGGGCTATTCATTGGT+TGG	0.427301	8.3:+15331980	MS.gene033079:CDS
TCTGAACATGAGCCCAAAGC+TGG	0.430995	8.3:+15331948	MS.gene033079:CDS
AACCTTACGATTCTGGTTTG+TGG	0.435471	8.3:+15332099	MS.gene033079:CDS
TCATCTTCATACATGTCTCT+TGG	0.436970	8.3:+15331857	MS.gene033079:CDS
CGCTCCTATAACGAATCATA+TGG	0.447526	8.3:+15332350	MS.gene033079:CDS
TTAAGCTTGTTGATTGTCAC+CGG	0.464950	8.3:-15332414	None:intergenic
GCAGAGCATAAAGGAGAAAA+GGG	0.474610	8.3:-15332248	None:intergenic
TTTCCTTTCAATTAAATCAA+AGG	0.474723	8.3:-15332039	None:intergenic
AACAGATGATCCTAATAGAT+TGG	0.485016	8.3:+15332292	MS.gene033079:CDS
TGTTTAAGCTTATATGGCAC+AGG	0.490002	8.3:-15332074	None:intergenic
TATACAAAGTGCATAAGTCT+TGG	0.491874	8.3:+15332186	MS.gene033079:CDS
GGGTGTTGAATGCCATCAAA+AGG	0.508697	8.3:-15332227	None:intergenic
TTGCCTTTGATTTAATTGAA+AGG	0.515684	8.3:+15332036	MS.gene033079:CDS
TCTCATTGAGAACTAATACA+TGG	0.535970	8.3:+15331886	MS.gene033079:CDS
AGCTGGGTTGTTCTTTAATG+GGG	0.543964	8.3:+15331965	MS.gene033079:CDS
TCGTGGTGCAGCTGAAATAT+GGG	0.550093	8.3:+15332154	MS.gene033079:CDS
AATACATGGAAACAAATTCA+GGG	0.551639	8.3:+15331900	MS.gene033079:CDS
AGATTGGTGAAGTATAATCA+TGG	0.553410	8.3:+15332308	MS.gene033079:CDS
CGAATCATATGGACCTGAAG+TGG	0.577896	8.3:+15332361	MS.gene033079:CDS
CTGAACATGAGCCCAAAGCT+GGG	0.581867	8.3:+15331949	MS.gene033079:CDS
ACCCACAAACCAGAATCGTA+AGG	0.614833	8.3:-15332101	None:intergenic
GAGACATGTATGAAGATGAA+CGG	0.643604	8.3:-15331853	None:intergenic
AAGCAGAGACTCTGTATACA+CGG	0.652046	8.3:-15332384	None:intergenic
TAAGCTTGTTGATTGTCACC+GGG	0.663785	8.3:-15332413	None:intergenic
TTGGTGAAGTATAATCATGG+AGG	0.690121	8.3:+15332311	MS.gene033079:CDS
CTTGGTTTGTGGGCTCATCG+TGG	0.695842	8.3:+15332137	MS.gene033079:CDS
GCAGATGCATACATGCAATG+AGG	0.696847	8.3:-15331924	None:intergenic
CAGAGCATAAAGGAGAAAAG+GGG	0.698195	8.3:-15332247	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTCCTTTCAATTAAATCAA+AGG	-	chr8.3:15332042-15332061	None:intergenic	20.0%
!!!	GCAAAAAAAGGTATTATTAT+TGG	+	chr8.3:15332269-15332288	MS.gene033079:CDS	20.0%
!	AATACATGGAAACAAATTCA+GGG	+	chr8.3:15331900-15331919	MS.gene033079:CDS	25.0%
!	TAATACATGGAAACAAATTC+AGG	+	chr8.3:15331899-15331918	MS.gene033079:CDS	25.0%
!	TTATACTTCACCAATCTATT+AGG	-	chr8.3:15332305-15332324	None:intergenic	25.0%
!!	TTGCCTTTGATTTAATTGAA+AGG	+	chr8.3:15332036-15332055	MS.gene033079:CDS	25.0%
	AACAGATGATCCTAATAGAT+TGG	+	chr8.3:15332292-15332311	MS.gene033079:CDS	30.0%
	AGATTGGTGAAGTATAATCA+TGG	+	chr8.3:15332308-15332327	MS.gene033079:CDS	30.0%
	GGTTCATGTTTAAGCTTATA+TGG	-	chr8.3:15332083-15332102	None:intergenic	30.0%
	TATACAAAGTGCATAAGTCT+TGG	+	chr8.3:15332186-15332205	MS.gene033079:CDS	30.0%
	TCTCATTGAGAACTAATACA+TGG	+	chr8.3:15331886-15331905	MS.gene033079:CDS	30.0%
!	ACTCATGTTTTTCCTTTTGA+TGG	+	chr8.3:15332215-15332234	MS.gene033079:CDS	30.0%
!!!	TTTTCGTCTTGATTTGCTAA+AGG	+	chr8.3:15332004-15332023	MS.gene033079:CDS	30.0%
	AAACATGAACCTTACGATTC+TGG	+	chr8.3:15332092-15332111	MS.gene033079:CDS	35.0%
	AAAGCTGGGTTGTTCTTTAA+TGG	+	chr8.3:15331963-15331982	MS.gene033079:CDS	35.0%
	AAGCTGGGTTGTTCTTTAAT+GGG	+	chr8.3:15331964-15331983	MS.gene033079:CDS	35.0%
	AGGTCCATATGATTCGTTAT+AGG	-	chr8.3:15332357-15332376	None:intergenic	35.0%
	ATTAAAGAACAACCCAGCTT+TGG	-	chr8.3:15331964-15331983	None:intergenic	35.0%
	CCTTTATGCTCTGCAAAAAA+AGG	+	chr8.3:15332257-15332276	MS.gene033079:CDS	35.0%
	GAGACATGTATGAAGATGAA+CGG	-	chr8.3:15331856-15331875	None:intergenic	35.0%
	TCATCTTCATACATGTCTCT+TGG	+	chr8.3:15331857-15331876	MS.gene033079:CDS	35.0%
	TCTTTAATGGGGCTATTCAT+TGG	+	chr8.3:15331976-15331995	MS.gene033079:CDS	35.0%
	TGGGTATTTGGAGAATTTCT+TGG	+	chr8.3:15332119-15332138	MS.gene033079:CDS	35.0%
	TGTTTAAGCTTATATGGCAC+AGG	-	chr8.3:15332077-15332096	None:intergenic	35.0%
	TTAAAGAACAACCCAGCTTT+GGG	-	chr8.3:15331963-15331982	None:intergenic	35.0%
	TTGGTGAAGTATAATCATGG+AGG	+	chr8.3:15332311-15332330	MS.gene033079:CDS	35.0%
!	TTGGAGAATTTCTTGGTTTG+TGG	+	chr8.3:15332126-15332145	MS.gene033079:CDS	35.0%
!!	TGGAGAATTTCTTGGTTTGT+GGG	+	chr8.3:15332127-15332146	MS.gene033079:CDS	35.0%
!!	TTAAGCTTGTTGATTGTCAC+CGG	-	chr8.3:15332417-15332436	None:intergenic	35.0%
!!!	CCTTTTTTTGCAGAGCATAA+AGG	-	chr8.3:15332260-15332279	None:intergenic	35.0%
	AAGCAGAGACTCTGTATACA+CGG	-	chr8.3:15332387-15332406	None:intergenic	40.0%
	AGCTGGGTTGTTCTTTAATG+GGG	+	chr8.3:15331965-15331984	MS.gene033079:CDS	40.0%
	CAGAGCATAAAGGAGAAAAG+GGG	-	chr8.3:15332250-15332269	None:intergenic	40.0%
	CGCTCCTATAACGAATCATA+TGG	+	chr8.3:15332350-15332369	MS.gene033079:CDS	40.0%
	GCAGAGCATAAAGGAGAAAA+GGG	-	chr8.3:15332251-15332270	None:intergenic	40.0%
	TAATGGGGCTATTCATTGGT+TGG	+	chr8.3:15331980-15331999	MS.gene033079:CDS	40.0%
	TGCAGAGCATAAAGGAGAAA+AGG	-	chr8.3:15332252-15332271	None:intergenic	40.0%
!!	AACCTTACGATTCTGGTTTG+TGG	+	chr8.3:15332099-15332118	MS.gene033079:CDS	40.0%
!!	ACCTTACGATTCTGGTTTGT+GGG	+	chr8.3:15332100-15332119	MS.gene033079:CDS	40.0%
!!	GATTCTGGTTTGTGGGTATT+TGG	+	chr8.3:15332107-15332126	MS.gene033079:CDS	40.0%
!!	TAAGCTTGTTGATTGTCACC+GGG	-	chr8.3:15332416-15332435	None:intergenic	40.0%
	ACCCACAAACCAGAATCGTA+AGG	-	chr8.3:15332104-15332123	None:intergenic	45.0%
	ATCGTGGTGCAGCTGAAATA+TGG	+	chr8.3:15332153-15332172	MS.gene033079:CDS	45.0%
	CGAATCATATGGACCTGAAG+TGG	+	chr8.3:15332361-15332380	MS.gene033079:CDS	45.0%
	GCAGATGCATACATGCAATG+AGG	-	chr8.3:15331927-15331946	None:intergenic	45.0%
	TCGTGGTGCAGCTGAAATAT+GGG	+	chr8.3:15332154-15332173	MS.gene033079:CDS	45.0%
!!	GGGTGTTGAATGCCATCAAA+AGG	-	chr8.3:15332230-15332249	None:intergenic	45.0%
	CTGAACATGAGCCCAAAGCT+GGG	+	chr8.3:15331949-15331968	MS.gene033079:CDS	50.0%
	GAGTCTCTGCTTTCACTTCC+CGG	+	chr8.3:15332395-15332414	MS.gene033079:CDS	50.0%
	TCTGAACATGAGCCCAAAGC+TGG	+	chr8.3:15331948-15331967	MS.gene033079:CDS	50.0%
	TCTGTATACACGGCCACTTC+AGG	-	chr8.3:15332377-15332396	None:intergenic	50.0%
!!	CTTGGTTTGTGGGCTCATCG+TGG	+	chr8.3:15332137-15332156	MS.gene033079:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	15331849	15332436	15331849	ID=MS.gene033079
chr8.3	mRNA	15331849	15332436	15331849	ID=MS.gene033079.t1;Parent=MS.gene033079
chr8.3	exon	15331849	15332436	15331849	ID=MS.gene033079.t1.exon1;Parent=MS.gene033079.t1
chr8.3	CDS	15331849	15332436	15331849	ID=cds.MS.gene033079.t1;Parent=MS.gene033079.t1

Gene Sequence

>MS.gene033079

ATGTCCGTTCATCTTCATACATGTCTCTTGGAGATTTTCTCATTGAGAACTAATACATGGAAACAAATTCAGGGTCCTCATTGCATGTATGCATCTGCTTCTGAACATGAGCCCAAAGCTGGGTTGTTCTTTAATGGGGCTATTCATTGGTTGGCTTTTCGTCTTGATTTGCTAAAGGATGTTATTGTTGCCTTTGATTTAATTGAAAGGAAATTTTTTTGTATGCCTGTGCCATATAAGCTTAAACATGAACCTTACGATTCTGGTTTGTGGGTATTTGGAGAATTTCTTGGTTTGTGGGCTCATCGTGGTGCAGCTGAAATATGGGTGATGAAAGTATACAAAGTGCATAAGTCTTGGACAAACACTCATGTTTTTCCTTTTGATGGCATTCAACACCCCTTTTCTCCTTTATGCTCTGCAAAAAAAGGTATTATTATTGGAACAGATGATCCTAATAGATTGGTGAAGTATAATCATGGAGGAAAGTTGTTAGAGTGTCGCTCCTATAACGAATCATATGGACCTGAAGTGGCCGTGTATACAGAGTCTCTGCTTTCACTTCCCGGTGACAATCAACAAGCTTAA

Protein sequence

>MS.gene033079.t1

MSVHLHTCLLEIFSLRTNTWKQIQGPHCMYASASEHEPKAGLFFNGAIHWLAFRLDLLKDVIVAFDLIERKFFCMPVPYKLKHEPYDSGLWVFGEFLGLWAHRGAAEIWVMKVYKVHKSWTNTHVFPFDGIQHPFSPLCSAKKGIIIGTDDPNRLVKYNHGGKLLECRSYNESYGPEVAVYTESLLSLPGDNQQA