AlfalfaGEDB | MS.gene28758

M. sativa cultivar XinJiangDaYe / MS.gene28758

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28758.t1	XP_013457251.1	79.1	134	26	1	1	132	231	364	2.60E-53	218

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28758.t1	A0A072UNK5	79.1	134	26	1	1	132	231	364	1.9e-53	218.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene041468	MS.gene28758	PPI
MS.gene009891	MS.gene28758	PPI
MS.gene82082	MS.gene28758	PPI
MS.gene22715	MS.gene28758	PPI
MS.gene50306	MS.gene28758	PPI
MS.gene90742	MS.gene28758	PPI
MS.gene58316	MS.gene28758	PPI
MS.gene38220	MS.gene28758	PPI
MS.gene57535	MS.gene28758	PPI
MS.gene012215	MS.gene28758	PPI
MS.gene024008	MS.gene28758	PPI
MS.gene87200	MS.gene28758	PPI
MS.gene58319	MS.gene28758	PPI
MS.gene058669	MS.gene28758	PPI
MS.gene59637	MS.gene28758	PPI
MS.gene26830	MS.gene28758	PPI
MS.gene033432	MS.gene28758	PPI
MS.gene28758	MS.gene058703	PPI
MS.gene044425	MS.gene28758	PPI
MS.gene041489	MS.gene28758	PPI
MS.gene59639	MS.gene28758	PPI
MS.gene44885	MS.gene28758	PPI
MS.gene031590	MS.gene28758	PPI
MS.gene060370	MS.gene28758	PPI
MS.gene50327	MS.gene28758	PPI
MS.gene066635	MS.gene28758	PPI
MS.gene010758	MS.gene28758	PPI
MS.gene28758	MS.gene22715	PPI
MS.gene96406	MS.gene28758	PPI
MS.gene87586	MS.gene28758	PPI
MS.gene57530	MS.gene28758	PPI
MS.gene50326	MS.gene28758	PPI
MS.gene28758	MS.gene36595	PPI
MS.gene42451	MS.gene28758	PPI
MS.gene51200	MS.gene28758	PPI
MS.gene50339	MS.gene28758	PPI
MS.gene54541	MS.gene28758	PPI
MS.gene046958	MS.gene28758	PPI
MS.gene28758	MS.gene061240	PPI
MS.gene87564	MS.gene28758	PPI
MS.gene88774	MS.gene28758	PPI
MS.gene28758	MS.gene50311	PPI
MS.gene28758	MS.gene058989	PPI
MS.gene42452	MS.gene28758	PPI
MS.gene28758	MS.gene57538	PPI
MS.gene40986	MS.gene28758	PPI
MS.gene28758	MS.gene041468	PPI
MS.gene063414	MS.gene28758	PPI
MS.gene28758	MS.gene27319	PPI
MS.gene69307	MS.gene28758	PPI
MS.gene009892	MS.gene28758	PPI
MS.gene57526	MS.gene28758	PPI
MS.gene021553	MS.gene28758	PPI
MS.gene051820	MS.gene28758	PPI
MS.gene26957	MS.gene28758	PPI
MS.gene97996	MS.gene28758	PPI
MS.gene28758	MS.gene044425	PPI
MS.gene036582	MS.gene28758	PPI
MS.gene27021	MS.gene28758	PPI
MS.gene034680	MS.gene28758	PPI
MS.gene035235	MS.gene28758	PPI
MS.gene58320	MS.gene28758	PPI
MS.gene26101	MS.gene28758	PPI
MS.gene066120	MS.gene28758	PPI
MS.gene27283	MS.gene28758	PPI
MS.gene63657	MS.gene28758	PPI
MS.gene053299	MS.gene28758	PPI
MS.gene28758	MS.gene24173	PPI
MS.gene58781	MS.gene28758	PPI
MS.gene57717	MS.gene28758	PPI
MS.gene028390	MS.gene28758	PPI
MS.gene011106	MS.gene28758	PPI
MS.gene033440	MS.gene28758	PPI
MS.gene28758	MS.gene27022	PPI
MS.gene44886	MS.gene28758	PPI
MS.gene064083	MS.gene28758	PPI
MS.gene066623	MS.gene28758	PPI
MS.gene038756	MS.gene28758	PPI
MS.gene40904	MS.gene28758	PPI
MS.gene24286	MS.gene28758	PPI
MS.gene40984	MS.gene28758	PPI
MS.gene92376	MS.gene28758	PPI
MS.gene28758	MS.gene023999	PPI
MS.gene033442	MS.gene28758	PPI
MS.gene000035	MS.gene28758	PPI
MS.gene024420	MS.gene28758	PPI
MS.gene87569	MS.gene28758	PPI
MS.gene87573	MS.gene28758	PPI
MS.gene041491	MS.gene28758	PPI
MS.gene019504	MS.gene28758	PPI
MS.gene51207	MS.gene28758	PPI
MS.gene50311	MS.gene28758	PPI
MS.gene059096	MS.gene28758	PPI
MS.gene57528	MS.gene28758	PPI
MS.gene28758	MS.gene000036	PPI
MS.gene50297	MS.gene28758	PPI
MS.gene28758	MS.gene50320	PPI
MS.gene006711	MS.gene28758	PPI
MS.gene27285	MS.gene28758	PPI
MS.gene58716	MS.gene28758	PPI
MS.gene68580	MS.gene28758	PPI
MS.gene033444	MS.gene28758	PPI
MS.gene019505	MS.gene28758	PPI
MS.gene053257	MS.gene28758	PPI
MS.gene045476	MS.gene28758	PPI
MS.gene58785	MS.gene28758	PPI
MS.gene034690	MS.gene28758	PPI
MS.gene024009	MS.gene28758	PPI
MS.gene066639	MS.gene28758	PPI
MS.gene26949	MS.gene28758	PPI
MS.gene51189	MS.gene28758	PPI
MS.gene036599	MS.gene28758	PPI
MS.gene044426	MS.gene28758	PPI
MS.gene85454	MS.gene28758	PPI
MS.gene96407	MS.gene28758	PPI
MS.gene036558	MS.gene28758	PPI
MS.gene50309	MS.gene28758	PPI
MS.gene036760	MS.gene28758	PPI
MS.gene77857	MS.gene28758	PPI
MS.gene27022	MS.gene28758	PPI
MS.gene58311	MS.gene28758	PPI
MS.gene43790	MS.gene28758	PPI
MS.gene57527	MS.gene28758	PPI
MS.gene51191	MS.gene28758	PPI
MS.gene28758	MS.gene50305	PPI
MS.gene033426	MS.gene28758	PPI
MS.gene035237	MS.gene28758	PPI
MS.gene016220	MS.gene28758	PPI
MS.gene064086	MS.gene28758	PPI
MS.gene28758	MS.gene032969	PPI
MS.gene034681	MS.gene28758	PPI
MS.gene034677	MS.gene28758	PPI
MS.gene50298	MS.gene28758	PPI
MS.gene036584	MS.gene28758	PPI
MS.gene67687	MS.gene28758	PPI
MS.gene035261	MS.gene28758	PPI
MS.gene28758	MS.gene42445	PPI
MS.gene063670	MS.gene28758	PPI
MS.gene27319	MS.gene28758	PPI
MS.gene28758	MS.gene63657	PPI
MS.gene066626	MS.gene28758	PPI
MS.gene019506	MS.gene28758	PPI
MS.gene28758	MS.gene023996	PPI
MS.gene006705	MS.gene28758	PPI
MS.gene058692	MS.gene28758	PPI
MS.gene28758	MS.gene045473	PPI
MS.gene033083	MS.gene28758	PPI
MS.gene69309	MS.gene28758	PPI
MS.gene63658	MS.gene28758	PPI
MS.gene024002	MS.gene28758	PPI
MS.gene033081	MS.gene28758	PPI
MS.gene036581	MS.gene28758	PPI
MS.gene035263	MS.gene28758	PPI
MS.gene57538	MS.gene28758	PPI
MS.gene035262	MS.gene28758	PPI
MS.gene034686	MS.gene28758	PPI
MS.gene28758	MS.gene035234	PPI
MS.gene40982	MS.gene28758	PPI
MS.gene070461	MS.gene28758	PPI
MS.gene003076	MS.gene28758	PPI
MS.gene58315	MS.gene28758	PPI
MS.gene058703	MS.gene28758	PPI
MS.gene87557	MS.gene28758	PPI
MS.gene030114	MS.gene28758	PPI
MS.gene036662	MS.gene28758	PPI
MS.gene036663	MS.gene28758	PPI
MS.gene87563	MS.gene28758	PPI
MS.gene033431	MS.gene28758	PPI
MS.gene064109	MS.gene28758	PPI
MS.gene24212	MS.gene28758	PPI
MS.gene041475	MS.gene28758	PPI
MS.gene40988	MS.gene28758	PPI
MS.gene81242	MS.gene28758	PPI
MS.gene64203	MS.gene28758	PPI
MS.gene045140	MS.gene28758	PPI
MS.gene024004	MS.gene28758	PPI
MS.gene42444	MS.gene28758	PPI
MS.gene51202	MS.gene28758	PPI
MS.gene44428	MS.gene28758	PPI
MS.gene059101	MS.gene28758	PPI
MS.gene87562	MS.gene28758	PPI
MS.gene041391	MS.gene28758	PPI
MS.gene28758	MS.gene024009	PPI
MS.gene28758	MS.gene036599	PPI
MS.gene26829	MS.gene28758	PPI
MS.gene064104	MS.gene28758	PPI
MS.gene40878	MS.gene28758	PPI
MS.gene28758	MS.gene006705	PPI
MS.gene36595	MS.gene28758	PPI
MS.gene51201	MS.gene28758	PPI
MS.gene88416	MS.gene28758	PPI
MS.gene033443	MS.gene28758	PPI
MS.gene035234	MS.gene28758	PPI
MS.gene54049	MS.gene28758	PPI
MS.gene50337	MS.gene28758	PPI
MS.gene43789	MS.gene28758	PPI
MS.gene061240	MS.gene28758	PPI
MS.gene28758	MS.gene38220	PPI
MS.gene50332	MS.gene28758	PPI
MS.gene072177	MS.gene28758	PPI
MS.gene58722	MS.gene28758	PPI
MS.gene064091	MS.gene28758	PPI
MS.gene064112	MS.gene28758	PPI
MS.gene24208	MS.gene28758	PPI
MS.gene061241	MS.gene28758	PPI
MS.gene50307	MS.gene28758	PPI
MS.gene24213	MS.gene28758	PPI
MS.gene43796	MS.gene28758	PPI
MS.gene044429	MS.gene28758	PPI
MS.gene28758	MS.gene058696	PPI
MS.gene28758	MS.gene009893	PPI
MS.gene58312	MS.gene28758	PPI
MS.gene36704	MS.gene28758	PPI
MS.gene24173	MS.gene28758	PPI
MS.gene036556	MS.gene28758	PPI
MS.gene58313	MS.gene28758	PPI
MS.gene066622	MS.gene28758	PPI
MS.gene44887	MS.gene28758	PPI
MS.gene85043	MS.gene28758	PPI
MS.gene39265	MS.gene28758	PPI
MS.gene033430	MS.gene28758	PPI
MS.gene036583	MS.gene28758	PPI
MS.gene88780	MS.gene28758	PPI
MS.gene87588	MS.gene28758	PPI
MS.gene055694	MS.gene28758	PPI
MS.gene58314	MS.gene28758	PPI
MS.gene28758	MS.gene041391	PPI
MS.gene045473	MS.gene28758	PPI
MS.gene71159	MS.gene28758	PPI
MS.gene96448	MS.gene28758	PPI
MS.gene77858	MS.gene28758	PPI
MS.gene041392	MS.gene28758	PPI
MS.gene58317	MS.gene28758	PPI
MS.gene58240	MS.gene28758	PPI
MS.gene069075	MS.gene28758	PPI
MS.gene40985	MS.gene28758	PPI
MS.gene031591	MS.gene28758	PPI
MS.gene28758	MS.gene40984	PPI
MS.gene50301	MS.gene28758	PPI
MS.gene28758	MS.gene016220	PPI
MS.gene51199	MS.gene28758	PPI
MS.gene58321	MS.gene28758	PPI
MS.gene041388	MS.gene28758	PPI
MS.gene064108	MS.gene28758	PPI
MS.gene062698	MS.gene28758	PPI
MS.gene57536	MS.gene28758	PPI
MS.gene96126	MS.gene28758	PPI
MS.gene019503	MS.gene28758	PPI
MS.gene016524	MS.gene28758	PPI
MS.gene87559	MS.gene28758	PPI
MS.gene50304	MS.gene28758	PPI
MS.gene041473	MS.gene28758	PPI
MS.gene50336	MS.gene28758	PPI
MS.gene28758	MS.gene58240	PPI
MS.gene59943	MS.gene28758	PPI
MS.gene28758	MS.gene27284	PPI
MS.gene31587	MS.gene28758	PPI
MS.gene041393	MS.gene28758	PPI
MS.gene033441	MS.gene28758	PPI
MS.gene28758	MS.gene034680	PPI
MS.gene063474	MS.gene28758	PPI
MS.gene048193	MS.gene28758	PPI
MS.gene023996	MS.gene28758	PPI
MS.gene063826	MS.gene28758	PPI
MS.gene060367	MS.gene28758	PPI
MS.gene44892	MS.gene28758	PPI
MS.gene036664	MS.gene28758	PPI
MS.gene58239	MS.gene28758	PPI
MS.gene023999	MS.gene28758	PPI
MS.gene066641	MS.gene28758	PPI
MS.gene024011	MS.gene28758	PPI
MS.gene000038	MS.gene28758	PPI
MS.gene57531	MS.gene28758	PPI
MS.gene064111	MS.gene28758	PPI
MS.gene28758	MS.gene033442	PPI
MS.gene87584	MS.gene28758	PPI
MS.gene67501	MS.gene28758	PPI
MS.gene39262	MS.gene28758	PPI
MS.gene58241	MS.gene28758	PPI
MS.gene053256	MS.gene28758	PPI
MS.gene025887	MS.gene28758	PPI
MS.gene019507	MS.gene28758	PPI
MS.gene045474	MS.gene28758	PPI
MS.gene75875	MS.gene28758	PPI
MS.gene041470	MS.gene28758	PPI
MS.gene058694	MS.gene28758	PPI
MS.gene064090	MS.gene28758	PPI
MS.gene024979	MS.gene28758	PPI
MS.gene058701	MS.gene28758	PPI
MS.gene27284	MS.gene28758	PPI
MS.gene058989	MS.gene28758	PPI
MS.gene032969	MS.gene28758	PPI
MS.gene000036	MS.gene28758	PPI
MS.gene28758	MS.gene041489	PPI
MS.gene015089	MS.gene28758	PPI
MS.gene006710	MS.gene28758	PPI
MS.gene90743	MS.gene28758	PPI
MS.gene28758	MS.gene024000	PPI
MS.gene011679	MS.gene28758	PPI
MS.gene87554	MS.gene28758	PPI
MS.gene033079	MS.gene28758	PPI
MS.gene64001	MS.gene28758	PPI
MS.gene57533	MS.gene28758	PPI
MS.gene51190	MS.gene28758	PPI
MS.gene28758	MS.gene035238	PPI
MS.gene032970	MS.gene28758	PPI
MS.gene035238	MS.gene28758	PPI
MS.gene77856	MS.gene28758	PPI
MS.gene24826	MS.gene28758	PPI
MS.gene57532	MS.gene28758	PPI
MS.gene68890	MS.gene28758	PPI
MS.gene40887	MS.gene28758	PPI
MS.gene28758	MS.gene80610	PPI
MS.gene80610	MS.gene28758	PPI
MS.gene034688	MS.gene28758	PPI
MS.gene51188	MS.gene28758	PPI
MS.gene63655	MS.gene28758	PPI
MS.gene44883	MS.gene28758	PPI
MS.gene060366	MS.gene28758	PPI
MS.gene047279	MS.gene28758	PPI
MS.gene48221	MS.gene28758	PPI
MS.gene41046	MS.gene28758	PPI
MS.gene063472	MS.gene28758	PPI
MS.gene017412	MS.gene28758	PPI
MS.gene57529	MS.gene28758	PPI
MS.gene024000	MS.gene28758	PPI
MS.gene80884	MS.gene28758	PPI
MS.gene50320	MS.gene28758	PPI
MS.gene51192	MS.gene28758	PPI
MS.gene87585	MS.gene28758	PPI
MS.gene009883	MS.gene28758	PPI
MS.gene42445	MS.gene28758	PPI
MS.gene041395	MS.gene28758	PPI
MS.gene40886	MS.gene28758	PPI
MS.gene40902	MS.gene28758	PPI
MS.gene044563	MS.gene28758	PPI
MS.gene033427	MS.gene28758	PPI
MS.gene03060	MS.gene28758	PPI
MS.gene27051	MS.gene28758	PPI
MS.gene28758	MS.gene064083	PPI
MS.gene060368	MS.gene28758	PPI
MS.gene033875	MS.gene28758	PPI
MS.gene041474	MS.gene28758	PPI
MS.gene77704	MS.gene28758	PPI
MS.gene058696	MS.gene28758	PPI
MS.gene27020	MS.gene28758	PPI
MS.gene066620	MS.gene28758	PPI
MS.gene035236	MS.gene28758	PPI
MS.gene50305	MS.gene28758	PPI
MS.gene28758	MS.gene024008	PPI
MS.gene86273	MS.gene28758	PPI
MS.gene041394	MS.gene28758	PPI
MS.gene059157	MS.gene28758	PPI
MS.gene51208	MS.gene28758	PPI
MS.gene57525	MS.gene28758	PPI
MS.gene62398	MS.gene28758	PPI
MS.gene60027	MS.gene28758	PPI
MS.gene045475	MS.gene28758	PPI
MS.gene88776	MS.gene28758	PPI
MS.gene009893	MS.gene28758	PPI
MS.gene35068	MS.gene28758	PPI
MS.gene041390	MS.gene28758	PPI
MS.gene90744	MS.gene28758	PPI
MS.gene51204	MS.gene28758	PPI
MS.gene58783	MS.gene28758	PPI
MS.gene058693	MS.gene28758	PPI
MS.gene036557	MS.gene28758	PPI
MS.gene50329	MS.gene28758	PPI
MS.gene070462	MS.gene28758	PPI
MS.gene31637	MS.gene28758	PPI
MS.gene57537	MS.gene28758	PPI
MS.gene42447	MS.gene28758	PPI
MS.gene034762	MS.gene28758	PPI
MS.gene064114	MS.gene28758	PPI
MS.gene059156	MS.gene28758	PPI
MS.gene84698	MS.gene28758	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28758.t1	MTR_4g094365	79.104	134	26	1	1	132	231	364	2.37e-69	213
MS.gene28758.t1	MTR_8g433040	61.364	132	49	1	1	132	235	364	1.39e-47	157
MS.gene28758.t1	MTR_8g032380	61.364	132	49	1	1	132	235	364	1.39e-47	157
MS.gene28758.t1	MTR_8g433030	62.992	127	44	2	1	126	212	336	4.90e-46	152
MS.gene28758.t1	MTR_8g032390	62.992	127	44	2	1	126	245	369	1.26e-45	152
MS.gene28758.t1	MTR_4g122850	57.463	134	54	3	1	132	232	364	8.49e-45	150
MS.gene28758.t1	MTR_4g116330	56.296	135	56	2	1	132	246	380	5.73e-44	147
MS.gene28758.t1	MTR_6g060650	56.061	132	55	2	1	131	243	372	1.82e-42	144
MS.gene28758.t1	MTR_8g040935	54.478	134	58	2	2	132	75	208	1.06e-41	137
MS.gene28758.t1	MTR_4g109270	56.391	133	57	1	1	132	232	364	2.15e-41	140
MS.gene28758.t1	MTR_3g103020	54.887	133	59	1	1	132	246	378	3.70e-41	140
MS.gene28758.t1	MTR_4g116320	55.725	131	55	2	1	129	126	255	4.27e-41	137
MS.gene28758.t1	MTR_4g109280	57.037	135	52	4	1	132	228	359	5.58e-41	139
MS.gene28758.t1	MTR_4g117870	51.562	128	61	1	5	132	141	267	6.66e-36	124
MS.gene28758.t1	MTR_4g117780	57.143	112	47	1	22	132	256	367	2.03e-35	125
MS.gene28758.t1	MTR_4g117770	57.143	112	47	1	22	132	256	367	2.48e-35	125
MS.gene28758.t1	MTR_4g117810	57.143	112	47	1	22	132	256	367	2.48e-35	125
MS.gene28758.t1	MTR_4g117720	51.515	132	56	4	1	126	242	371	3.28e-35	125
MS.gene28758.t1	MTR_4g023130	53.383	133	56	4	1	131	184	312	4.01e-35	123
MS.gene28758.t1	MTR_3g034180	52.632	133	59	3	1	132	360	489	4.20e-35	126
MS.gene28758.t1	MTR_4g117850	53.968	126	56	2	2	125	248	373	4.68e-35	124
MS.gene28758.t1	MTR_4g023080	51.880	133	58	4	1	131	225	353	1.05e-33	120
MS.gene28758.t1	MTR_4g118360	50.781	128	56	5	8	131	1	125	1.61e-33	114
MS.gene28758.t1	MTR_4g122860	52.344	128	53	3	10	132	196	320	1.79e-33	119
MS.gene28758.t1	MTR_5g097210	52.344	128	59	1	2	129	235	360	2.65e-33	120
MS.gene28758.t1	MTR_1g055175	47.727	132	67	2	1	131	70	200	2.78e-33	115
MS.gene28758.t1	MTR_4g023380	45.223	157	59	5	1	132	225	379	3.53e-33	119
MS.gene28758.t1	MTR_4g118370	50.769	130	59	3	1	129	132	257	1.40e-32	115
MS.gene28758.t1	MTR_4g023090	46.479	142	57	5	1	126	240	378	2.21e-32	117
MS.gene28758.t1	MTR_5g023000	55.556	99	43	1	35	132	1	99	2.47e-32	110
MS.gene28758.t1	MTR_4g116330	55.856	111	46	2	25	132	231	341	5.45e-32	115
MS.gene28758.t1	MTR_1g055165	47.727	132	67	2	1	131	187	317	6.90e-32	115
MS.gene28758.t1	MTR_4g117750	55.556	108	47	1	24	130	374	481	3.20e-31	115
MS.gene28758.t1	MTR_4g117750	46.281	121	60	3	12	131	242	358	1.27e-24	97.8
MS.gene28758.t1	MTR_4g021785	48.529	136	60	4	1	132	226	355	3.93e-31	114
MS.gene28758.t1	MTR_6g463430	50.000	134	60	4	1	132	74	202	4.08e-31	110
MS.gene28758.t1	MTR_1g055195	50.781	128	58	3	1	126	348	472	7.01e-31	115
MS.gene28758.t1	MTR_4g023070	45.833	144	62	4	2	131	228	369	1.77e-30	112
MS.gene28758.t1	MTR_3g034160	53.030	132	58	3	1	131	246	374	8.09e-30	110
MS.gene28758.t1	MTR_4g023120	44.595	148	60	4	2	132	228	370	2.18e-29	109
MS.gene28758.t1	MTR_1g055135	47.794	136	64	4	1	131	241	374	2.22e-29	109
MS.gene28758.t1	MTR_5g070080	48.413	126	63	2	2	126	255	379	5.24e-29	108
MS.gene28758.t1	MTR_3g034130	51.351	111	51	2	1	110	246	354	5.46e-29	108
MS.gene28758.t1	MTR_5g070130	46.875	128	66	2	1	126	243	370	1.64e-28	107
MS.gene28758.t1	MTR_4g023190	45.985	137	63	6	1	130	225	357	5.98e-28	105
MS.gene28758.t1	MTR_4g023200	45.985	137	63	6	1	130	226	358	1.34e-27	104
MS.gene28758.t1	MTR_4g118380	47.826	115	48	3	1	105	245	357	7.25e-27	102
MS.gene28758.t1	MTR_7g079450	46.212	132	65	4	2	132	11	137	1.09e-26	97.1
MS.gene28758.t1	MTR_4g023150	45.255	137	64	6	1	130	226	358	1.62e-26	101
MS.gene28758.t1	MTR_4g117530	51.376	109	47	3	25	132	150	253	1.75e-26	99.8
MS.gene28758.t1	MTR_8g102520	46.269	134	66	4	2	132	192	322	8.71e-26	99.4
MS.gene28758.t1	MTR_4g118400	45.238	126	54	3	2	126	183	294	1.57e-25	98.2
MS.gene28758.t1	MTR_5g070088	43.750	128	70	2	1	126	252	379	2.33e-24	96.3
MS.gene28758.t1	MTR_4g023440	56.383	94	36	3	41	132	242	332	2.86e-24	95.5
MS.gene28758.t1	MTR_1g055250	46.667	105	54	2	2	106	140	242	2.10e-23	92.8
MS.gene28758.t1	MTR_7g079400	43.478	138	68	5	2	132	203	337	9.55e-22	88.6
MS.gene28758.t1	MTR_4g114700	54.023	87	36	2	41	123	132	218	3.92e-20	82.8
MS.gene28758.t1	MTR_7g117720	55.814	86	33	3	46	126	186	271	6.85e-19	80.1
MS.gene28758.t1	MTR_4g122840	38.931	131	45	3	3	132	168	264	1.04e-18	79.3
MS.gene28758.t1	MTR_4g121580	41.221	131	62	5	4	131	230	348	1.08e-18	80.9
MS.gene28758.t1	MTR_8g013005	61.017	59	23	0	74	132	1	59	7.48e-17	69.7
MS.gene28758.t1	MTR_4g023430	53.659	82	32	3	56	132	142	222	2.00e-16	72.8
MS.gene28758.t1	MTR_7g079420	39.231	130	70	5	2	126	1013	1138	4.41e-16	73.9
MS.gene28758.t1	MTR_7g079370	41.085	129	67	5	2	126	227	350	4.63e-16	73.2
MS.gene28758.t1	MTR_8g098830	43.396	106	54	4	2	105	97	198	5.41e-16	71.6
MS.gene28758.t1	MTR_4g023100	56.140	57	23	1	76	132	65	119	1.30e-13	63.2
MS.gene28758.t1	MTR_4g109290	62.264	53	20	0	80	132	136	188	4.93e-12	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 27 sgRNAs with CRISPR-Local

Find 35 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATCTTGGTTCGTGGGTATT+TGG	0.245938	4.3:+19842716	MS.gene28758:CDS
ATAGCCGTACACTTAAAATA+TGG	0.266688	4.3:+19842771	MS.gene28758:CDS
TAAACTTGCTCTCTATCAAC+AGG	0.362152	4.3:-19843034	None:intergenic
CACGATGGTCCTGCATATCT+TGG	0.377345	4.3:+19842701	MS.gene28758:CDS
ATTGGATCAGACGGTGGTCT+TGG	0.412575	4.3:+19842905	MS.gene28758:CDS
ACTGTAAACTGCATCCATCT+TGG	0.469118	4.3:+19842804	MS.gene28758:CDS
TCGTGATAATCATCTGGAAC+AGG	0.478738	4.3:-19842683	None:intergenic
TTGCCTTTAATTTAATGGAA+AGG	0.482467	4.3:+19842645	None:intergenic
GTCCTGCATATCTTGGTTCG+TGG	0.485547	4.3:+19842708	MS.gene28758:CDS
GGACCATCGTGATAATCATC+TGG	0.487786	4.3:-19842689	None:intergenic
TTGGTGAAGTATAATGATAA+AGG	0.492510	4.3:+19842929	MS.gene28758:CDS
TAGCCGTACACTTAAAATAT+GGG	0.498718	4.3:+19842772	MS.gene28758:CDS
CTCTGTATACACGATCGCTT+GGG	0.514295	4.3:-19842996	None:intergenic
ACTCTGTATACACGATCGCT+TGG	0.527545	4.3:-19842997	None:intergenic
ACAAGAGTCTTAGTCCAAGA+TGG	0.541795	4.3:-19842818	None:intergenic
ATCAGACGGTGGTCTTGGAT+TGG	0.544899	4.3:+19842910	MS.gene28758:CDS
ACCCACGAACCAAGATATGC+AGG	0.553874	4.3:-19842710	None:intergenic
TCCTGCATATCTTGGTTCGT+GGG	0.554694	4.3:+19842709	MS.gene28758:CDS
GGTGATATTATTGGATCAGA+CGG	0.605256	4.3:+19842896	MS.gene28758:CDS
TAGAGGGGAAAATATGCGAA+TGG	0.624574	4.3:-19842858	None:intergenic
ACGATCGCTTGGGACCTAAG+TGG	0.637531	4.3:-19842986	None:intergenic
CCTACCGTGACTATCCACTT+AGG	0.665619	4.3:+19842972	MS.gene28758:CDS
GGGACCTAAGTGGATAGTCA+CGG	0.675794	4.3:-19842976	None:intergenic
GTTCCAGATGATTATCACGA+TGG	0.682457	4.3:+19842686	MS.gene28758:CDS
GATATTATTGGATCAGACGG+TGG	0.700053	4.3:+19842899	MS.gene28758:CDS
AAACTTGCTCTCTATCAACA+GGG	0.707501	4.3:-19843033	None:intergenic
CCTAAGTGGATAGTCACGGT+AGG	0.708448	4.3:-19842972	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ACAAAAAGTGGTGATATTAT+TGG	+	chr4.3:19842887-19842906	MS.gene28758:CDS	25.0%
!	TTGGTGAAGTATAATGATAA+AGG	+	chr4.3:19842929-19842948	MS.gene28758:CDS	25.0%
	ATAGCCGTACACTTAAAATA+TGG	+	chr4.3:19842771-19842790	MS.gene28758:CDS	30.0%
	TAGCCGTACACTTAAAATAT+GGG	+	chr4.3:19842772-19842791	MS.gene28758:CDS	30.0%
!	ACTTTTTGTAGAACATAGAG+GGG	-	chr4.3:19842876-19842895	None:intergenic	30.0%
!!	CACTTTTTGTAGAACATAGA+GGG	-	chr4.3:19842877-19842896	None:intergenic	30.0%
!!	TCACCCATATTTTAAGTGTA+CGG	-	chr4.3:19842778-19842797	None:intergenic	30.0%
!!	TGGAGAATTTTTCAGTCTAT+GGG	+	chr4.3:19842736-19842755	MS.gene28758:CDS	30.0%
!!	TTGGAGAATTTTTCAGTCTA+TGG	+	chr4.3:19842735-19842754	MS.gene28758:CDS	30.0%
	CCTCTATGTTCTACAAAAAG+TGG	+	chr4.3:19842875-19842894	MS.gene28758:CDS	35.0%
	GGTGATATTATTGGATCAGA+CGG	+	chr4.3:19842896-19842915	MS.gene28758:CDS	35.0%
!	AAACTTGCTCTCTATCAACA+GGG	-	chr4.3:19843036-19843055	None:intergenic	35.0%
!	TAAACTTGCTCTCTATCAAC+AGG	-	chr4.3:19843037-19843056	None:intergenic	35.0%
!!	ATTTTTCAGTCTATGGGCTA+TGG	+	chr4.3:19842742-19842761	MS.gene28758:CDS	35.0%
!!!	CCACTTTTTGTAGAACATAG+AGG	-	chr4.3:19842878-19842897	None:intergenic	35.0%
	ACAAGAGTCTTAGTCCAAGA+TGG	-	chr4.3:19842821-19842840	None:intergenic	40.0%
	ACTGTAAACTGCATCCATCT+TGG	+	chr4.3:19842804-19842823	MS.gene28758:CDS	40.0%
	GATATTATTGGATCAGACGG+TGG	+	chr4.3:19842899-19842918	MS.gene28758:CDS	40.0%
	GTTCCAGATGATTATCACGA+TGG	+	chr4.3:19842686-19842705	MS.gene28758:CDS	40.0%
	TAGAGGGGAAAATATGCGAA+TGG	-	chr4.3:19842861-19842880	None:intergenic	40.0%
!	TATCTTGGTTCGTGGGTATT+TGG	+	chr4.3:19842716-19842735	MS.gene28758:CDS	40.0%
!	TCGTGATAATCATCTGGAAC+AGG	-	chr4.3:19842686-19842705	None:intergenic	40.0%
	ACTCTGTATACACGATCGCT+TGG	-	chr4.3:19843000-19843019	None:intergenic	45.0%
	CTCTGTATACACGATCGCTT+GGG	-	chr4.3:19842999-19843018	None:intergenic	45.0%
	GGACCATCGTGATAATCATC+TGG	-	chr4.3:19842692-19842711	None:intergenic	45.0%
!	TCCTGCATATCTTGGTTCGT+GGG	+	chr4.3:19842709-19842728	MS.gene28758:CDS	45.0%
	ACCCACGAACCAAGATATGC+AGG	-	chr4.3:19842713-19842732	None:intergenic	50.0%
	ATTGGATCAGACGGTGGTCT+TGG	+	chr4.3:19842905-19842924	MS.gene28758:CDS	50.0%
	CACGATGGTCCTGCATATCT+TGG	+	chr4.3:19842701-19842720	MS.gene28758:CDS	50.0%
	CCTAAGTGGATAGTCACGGT+AGG	-	chr4.3:19842975-19842994	None:intergenic	50.0%
	CCTACCGTGACTATCCACTT+AGG	+	chr4.3:19842972-19842991	MS.gene28758:CDS	50.0%
	GGGACCTAAGTGGATAGTCA+CGG	-	chr4.3:19842979-19842998	None:intergenic	50.0%
!	ATCAGACGGTGGTCTTGGAT+TGG	+	chr4.3:19842910-19842929	MS.gene28758:CDS	50.0%
!	GTCCTGCATATCTTGGTTCG+TGG	+	chr4.3:19842708-19842727	MS.gene28758:CDS	50.0%
	ACGATCGCTTGGGACCTAAG+TGG	-	chr4.3:19842989-19843008	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	19842659	19843057	19842659	ID=MS.gene28758
chr4.3	mRNA	19842659	19843057	19842659	ID=MS.gene28758.t1;Parent=MS.gene28758
chr4.3	exon	19842659	19843057	19842659	ID=MS.gene28758.t1.exon1;Parent=MS.gene28758.t1
chr4.3	CDS	19842659	19843057	19842659	ID=cds.MS.gene28758.t1;Parent=MS.gene28758.t1

Gene Sequence

>MS.gene28758

ATGGAAAGGAAACTGTTAGAGATACCTGTTCCAGATGATTATCACGATGGTCCTGCATATCTTGGTTCGTGGGTATTTGGAGAATTTTTCAGTCTATGGGCTATGGATCATTATAGCCGTACACTTAAAATATGGGTGATGAATGACTGTAAACTGCATCCATCTTGGACTAAGACTCTTGTTGTTCGTATTGATGATGCCATTCGCATATTTTCCCCTCTATGTTCTACAAAAAGTGGTGATATTATTGGATCAGACGGTGGTCTTGGATTGGTGAAGTATAATGATAAAGGACAACTCTTAGAGTATTGCGCCTACCGTGACTATCCACTTAGGTCCCAAGCGATCGTGTATACAGAGTCTCTGCTTTCACTCCCTGTTGATAGAGAGCAAGTTTAA

Protein sequence

>MS.gene28758.t1

MERKLLEIPVPDDYHDGPAYLGSWVFGEFFSLWAMDHYSRTLKIWVMNDCKLHPSWTKTLVVRIDDAIRIFSPLCSTKSGDIIGSDGGLGLVKYNDKGQLLEYCAYRDYPLRSQAIVYTESLLSLPVDREQV