AlfalfaGEDB | MS.gene045140

M. sativa cultivar XinJiangDaYe / MS.gene045140

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF00646.36

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045140.t1	XP_013462883.1	53.4	264	99	7	1	242	1	262	4.00E-63	251.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045140.t1	Q8GXC7	26.5	279	136	9	4	221	36	306	2.0e-15	84.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045140.t1	A0A072V6F7	53.4	264	99	7	1	242	1	262	2.9e-63	251.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene045140	MS.gene024009	PPI
MS.gene58313	MS.gene045140	PPI
MS.gene045140	MS.gene009892	PPI
MS.gene066622	MS.gene045140	PPI
MS.gene045140	MS.gene006705	PPI
MS.gene63655	MS.gene045140	PPI
MS.gene44883	MS.gene045140	PPI
MS.gene045140	MS.gene061241	PPI
MS.gene045140	MS.gene51188	PPI
MS.gene41046	MS.gene045140	PPI
MS.gene87588	MS.gene045140	PPI
MS.gene017412	MS.gene045140	PPI
MS.gene57529	MS.gene045140	PPI
MS.gene045140	MS.gene38220	PPI
MS.gene045140	MS.gene40986	PPI
MS.gene80884	MS.gene045140	PPI
MS.gene045140	MS.gene041394	PPI
MS.gene045140	MS.gene03060	PPI
MS.gene51192	MS.gene045140	PPI
MS.gene045140	MS.gene033440	PPI
MS.gene009883	MS.gene045140	PPI
MS.gene045140	MS.gene024011	PPI
MS.gene045140	MS.gene58241	PPI
MS.gene58317	MS.gene045140	PPI
MS.gene045140	MS.gene064109	PPI
MS.gene044563	MS.gene045140	PPI
MS.gene069075	MS.gene045140	PPI
MS.gene045140	MS.gene058696	PPI
MS.gene033427	MS.gene045140	PPI
MS.gene045140	MS.gene035238	PPI
MS.gene045140	MS.gene85043	PPI
MS.gene045140	MS.gene064114	PPI
MS.gene40985	MS.gene045140	PPI
MS.gene041474	MS.gene045140	PPI
MS.gene27020	MS.gene045140	PPI
MS.gene066620	MS.gene045140	PPI
MS.gene035236	MS.gene045140	PPI
MS.gene045140	MS.gene80610	PPI
MS.gene041388	MS.gene045140	PPI
MS.gene045140	MS.gene033083	PPI
MS.gene062698	MS.gene045140	PPI
MS.gene96126	MS.gene045140	PPI
MS.gene51208	MS.gene045140	PPI
MS.gene016524	MS.gene045140	PPI
MS.gene50304	MS.gene045140	PPI
MS.gene045140	MS.gene40886	PPI
MS.gene045475	MS.gene045140	PPI
MS.gene88776	MS.gene045140	PPI
MS.gene59943	MS.gene045140	PPI
MS.gene35068	MS.gene045140	PPI
MS.gene90744	MS.gene045140	PPI
MS.gene045140	MS.gene041391	PPI
MS.gene51204	MS.gene045140	PPI
MS.gene045140	MS.gene033443	PPI
MS.gene036557	MS.gene045140	PPI
MS.gene041393	MS.gene045140	PPI
MS.gene50329	MS.gene045140	PPI
MS.gene57537	MS.gene045140	PPI
MS.gene045140	MS.gene045474	PPI
MS.gene059156	MS.gene045140	PPI
MS.gene045140	MS.gene058701	PPI
MS.gene045140	MS.gene036558	PPI
MS.gene84698	MS.gene045140	PPI
MS.gene045140	MS.gene87554	PPI
MS.gene045140	MS.gene009891	PPI
MS.gene045140	MS.gene27051	PPI
MS.gene045140	MS.gene40984	PPI
MS.gene009891	MS.gene045140	PPI
MS.gene045140	MS.gene064108	PPI
MS.gene82082	MS.gene045140	PPI
MS.gene045140	MS.gene048193	PPI
MS.gene045140	MS.gene016220	PPI
MS.gene045140	MS.gene024008	PPI
MS.gene57535	MS.gene045140	PPI
MS.gene87200	MS.gene045140	PPI
MS.gene045140	MS.gene58240	PPI
MS.gene045140	MS.gene27284	PPI
MS.gene033432	MS.gene045140	PPI
MS.gene045140	MS.gene57717	PPI
MS.gene045140	MS.gene48221	PPI
MS.gene44885	MS.gene045140	PPI
MS.gene045140	MS.gene50327	PPI
MS.gene045140	MS.gene066626	PPI
MS.gene060370	MS.gene045140	PPI
MS.gene50327	MS.gene045140	PPI
MS.gene066635	MS.gene045140	PPI
MS.gene045140	MS.gene063474	PPI
MS.gene045140	MS.gene51190	PPI
MS.gene045140	MS.gene58319	PPI
MS.gene010758	MS.gene045140	PPI
MS.gene045140	MS.gene044426	PPI
MS.gene045140	MS.gene034681	PPI
MS.gene87586	MS.gene045140	PPI
MS.gene57530	MS.gene045140	PPI
MS.gene045140	MS.gene57532	PPI
MS.gene045140	MS.gene033442	PPI
MS.gene51200	MS.gene045140	PPI
MS.gene40887	MS.gene045140	PPI
MS.gene50339	MS.gene045140	PPI
MS.gene046958	MS.gene045140	PPI
MS.gene060366	MS.gene045140	PPI
MS.gene045140	MS.gene44428	PPI
MS.gene045140	MS.gene058669	PPI
MS.gene045140	MS.gene066120	PPI
MS.gene88774	MS.gene045140	PPI
MS.gene045140	MS.gene035235	PPI
MS.gene42452	MS.gene045140	PPI
MS.gene045140	MS.gene041489	PPI
MS.gene063414	MS.gene045140	PPI
MS.gene045140	MS.gene024000	PPI
MS.gene045140	MS.gene034688	PPI
MS.gene045140	MS.gene24213	PPI
MS.gene045140	MS.gene033079	PPI
MS.gene045140	MS.gene034677	PPI
MS.gene40902	MS.gene045140	PPI
MS.gene045140	MS.gene055694	PPI
MS.gene045140	MS.gene059101	PPI
MS.gene57526	MS.gene045140	PPI
MS.gene045140	MS.gene58316	PPI
MS.gene021553	MS.gene045140	PPI
MS.gene26957	MS.gene045140	PPI
MS.gene060368	MS.gene045140	PPI
MS.gene033875	MS.gene045140	PPI
MS.gene97996	MS.gene045140	PPI
MS.gene045140	MS.gene87584	PPI
MS.gene045140	MS.gene58321	PPI
MS.gene036582	MS.gene045140	PPI
MS.gene27021	MS.gene045140	PPI
MS.gene58320	MS.gene045140	PPI
MS.gene045140	MS.gene87564	PPI
MS.gene045140	MS.gene58315	PPI
MS.gene58781	MS.gene045140	PPI
MS.gene045140	MS.gene90743	PPI
MS.gene028390	MS.gene045140	PPI
MS.gene011106	MS.gene045140	PPI
MS.gene033440	MS.gene045140	PPI
MS.gene62398	MS.gene045140	PPI
MS.gene60027	MS.gene045140	PPI
MS.gene44886	MS.gene045140	PPI
MS.gene038756	MS.gene045140	PPI
MS.gene045140	MS.gene85454	PPI
MS.gene40904	MS.gene045140	PPI
MS.gene045140	MS.gene036556	PPI
MS.gene041390	MS.gene045140	PPI
MS.gene045140	MS.gene57538	PPI
MS.gene92376	MS.gene045140	PPI
MS.gene000035	MS.gene045140	PPI
MS.gene045140	MS.gene058693	PPI
MS.gene045140	MS.gene27319	PPI
MS.gene87569	MS.gene045140	PPI
MS.gene31637	MS.gene045140	PPI
MS.gene87573	MS.gene045140	PPI
MS.gene041491	MS.gene045140	PPI
MS.gene019504	MS.gene045140	PPI
MS.gene034762	MS.gene045140	PPI
MS.gene059096	MS.gene045140	PPI
MS.gene50297	MS.gene045140	PPI
MS.gene045140	MS.gene064083	PPI
MS.gene58716	MS.gene045140	PPI
MS.gene045140	MS.gene58783	PPI
MS.gene033444	MS.gene045140	PPI
MS.gene019505	MS.gene045140	PPI
MS.gene045140	MS.gene024420	PPI
MS.gene50306	MS.gene045140	PPI
MS.gene045140	MS.gene50337	PPI
MS.gene58785	MS.gene045140	PPI
MS.gene045140	MS.gene54541	PPI
MS.gene045140	MS.gene39265	PPI
MS.gene034690	MS.gene045140	PPI
MS.gene045140	MS.gene036584	PPI
MS.gene045140	MS.gene036662	PPI
MS.gene066639	MS.gene045140	PPI
MS.gene26949	MS.gene045140	PPI
MS.gene045140	MS.gene060368	PPI
MS.gene045140	MS.gene053299	PPI
MS.gene96407	MS.gene045140	PPI
MS.gene50309	MS.gene045140	PPI
MS.gene036760	MS.gene045140	PPI
MS.gene045140	MS.gene28758	PPI
MS.gene045140	MS.gene044429	PPI
MS.gene045140	MS.gene42451	PPI
MS.gene77857	MS.gene045140	PPI
MS.gene58311	MS.gene045140	PPI
MS.gene57527	MS.gene045140	PPI
MS.gene045140	MS.gene69307	PPI
MS.gene033426	MS.gene045140	PPI
MS.gene59639	MS.gene045140	PPI
MS.gene50298	MS.gene045140	PPI
MS.gene67687	MS.gene045140	PPI
MS.gene045140	MS.gene019507	PPI
MS.gene045140	MS.gene033431	PPI
MS.gene035261	MS.gene045140	PPI
MS.gene045140	MS.gene034762	PPI
MS.gene045140	MS.gene59943	PPI
MS.gene063670	MS.gene045140	PPI
MS.gene045140	MS.gene58314	PPI
MS.gene019506	MS.gene045140	PPI
MS.gene50326	MS.gene045140	PPI
MS.gene045140	MS.gene67501	PPI
MS.gene045140	MS.gene96406	PPI
MS.gene058692	MS.gene045140	PPI
MS.gene045140	MS.gene035262	PPI
MS.gene69309	MS.gene045140	PPI
MS.gene045140	MS.gene028390	PPI
MS.gene024002	MS.gene045140	PPI
MS.gene045140	MS.gene40878	PPI
MS.gene034686	MS.gene045140	PPI
MS.gene045140	MS.gene058703	PPI
MS.gene40982	MS.gene045140	PPI
MS.gene070461	MS.gene045140	PPI
MS.gene045140	MS.gene047279	PPI
MS.gene045140	MS.gene012215	PPI
MS.gene045140	MS.gene032969	PPI
MS.gene036662	MS.gene045140	PPI
MS.gene045140	MS.gene42445	PPI
MS.gene87563	MS.gene045140	PPI
MS.gene033431	MS.gene045140	PPI
MS.gene045140	MS.gene26830	PPI
MS.gene045140	MS.gene22715	PPI
MS.gene051820	MS.gene045140	PPI
MS.gene045140	MS.gene51207	PPI
MS.gene045140	MS.gene36595	PPI
MS.gene81242	MS.gene045140	PPI
MS.gene26101	MS.gene045140	PPI
MS.gene27283	MS.gene045140	PPI
MS.gene64203	MS.gene045140	PPI
MS.gene045140	MS.gene024004	PPI
MS.gene024004	MS.gene045140	PPI
MS.gene045140	MS.gene061240	PPI
MS.gene42444	MS.gene045140	PPI
MS.gene51202	MS.gene045140	PPI
MS.gene045140	MS.gene041473	PPI
MS.gene87562	MS.gene045140	PPI
MS.gene045140	MS.gene50311	PPI
MS.gene045140	MS.gene035234	PPI
MS.gene045140	MS.gene058989	PPI
MS.gene045140	MS.gene041468	PPI
MS.gene064104	MS.gene045140	PPI
MS.gene045140	MS.gene041395	PPI
MS.gene045140	MS.gene42447	PPI
MS.gene045140	MS.gene51189	PPI
MS.gene033443	MS.gene045140	PPI
MS.gene54049	MS.gene045140	PPI
MS.gene43789	MS.gene045140	PPI
MS.gene045140	MS.gene046958	PPI
MS.gene57528	MS.gene045140	PPI
MS.gene045140	MS.gene24286	PPI
MS.gene045140	MS.gene044425	PPI
MS.gene006711	MS.gene045140	PPI
MS.gene27285	MS.gene045140	PPI
MS.gene072177	MS.gene045140	PPI
MS.gene064091	MS.gene045140	PPI
MS.gene064112	MS.gene045140	PPI
MS.gene045476	MS.gene045140	PPI
MS.gene045140	MS.gene40988	PPI
MS.gene24208	MS.gene045140	PPI
MS.gene50307	MS.gene045140	PPI
MS.gene045140	MS.gene59637	PPI
MS.gene43796	MS.gene045140	PPI
MS.gene045140	MS.gene24173	PPI
MS.gene58312	MS.gene045140	PPI
MS.gene045140	MS.gene27022	PPI
MS.gene045140	MS.gene035261	PPI
MS.gene045140	MS.gene87585	PPI
MS.gene51191	MS.gene045140	PPI
MS.gene045140	MS.gene023999	PPI
MS.gene045140	MS.gene036599	PPI
MS.gene44887	MS.gene045140	PPI
MS.gene85043	MS.gene045140	PPI
MS.gene033430	MS.gene045140	PPI
MS.gene045140	MS.gene036581	PPI
MS.gene045140	MS.gene035237	PPI
MS.gene036583	MS.gene045140	PPI
MS.gene88780	MS.gene045140	PPI
MS.gene045140	MS.gene000036	PPI
MS.gene045140	MS.gene50309	PPI
MS.gene045140	MS.gene50320	PPI
MS.gene045140	MS.gene87557	PPI
MS.gene045140	MS.gene035263	PPI
MS.gene71159	MS.gene045140	PPI
MS.gene96448	MS.gene045140	PPI
MS.gene77858	MS.gene045140	PPI
MS.gene045140	MS.gene036664	PPI
MS.gene041392	MS.gene045140	PPI
MS.gene045140	MS.gene053257	PPI
MS.gene045140	MS.gene77858	PPI
MS.gene045140	MS.gene51201	PPI
MS.gene033083	MS.gene045140	PPI
MS.gene045140	MS.gene009893	PPI
MS.gene63658	MS.gene045140	PPI
MS.gene033081	MS.gene045140	PPI
MS.gene045140	MS.gene50336	PPI
MS.gene031591	MS.gene045140	PPI
MS.gene045140	MS.gene77704	PPI
MS.gene035262	MS.gene045140	PPI
MS.gene51199	MS.gene045140	PPI
MS.gene045140	MS.gene50305	PPI
MS.gene57536	MS.gene045140	PPI
MS.gene019503	MS.gene045140	PPI
MS.gene045140	MS.gene68890	PPI
MS.gene87559	MS.gene045140	PPI
MS.gene045140	MS.gene86273	PPI
MS.gene045140	MS.gene036663	PPI
MS.gene045140	MS.gene68580	PPI
MS.gene041475	MS.gene045140	PPI
MS.gene31587	MS.gene045140	PPI
MS.gene045140	MS.gene57525	PPI
MS.gene033441	MS.gene045140	PPI
MS.gene045140	MS.gene63657	PPI
MS.gene045140	MS.gene059157	PPI
MS.gene045140	MS.gene023996	PPI
MS.gene045140	MS.gene030114	PPI
MS.gene045140	MS.gene045473	PPI
MS.gene045140	MS.gene50301	PPI
MS.gene063826	MS.gene045140	PPI
MS.gene045140	MS.gene070462	PPI
MS.gene060367	MS.gene045140	PPI
MS.gene045140	MS.gene031590	PPI
MS.gene44892	MS.gene045140	PPI
MS.gene58239	MS.gene045140	PPI
MS.gene045140	MS.gene066623	PPI
MS.gene066641	MS.gene045140	PPI
MS.gene045140	MS.gene064086	PPI
MS.gene045140	MS.gene064090	PPI
MS.gene000038	MS.gene045140	PPI
MS.gene57531	MS.gene045140	PPI
MS.gene064111	MS.gene045140	PPI
MS.gene045140	MS.gene58317	PPI
MS.gene045140	MS.gene90742	PPI
MS.gene26829	MS.gene045140	PPI
MS.gene39262	MS.gene045140	PPI
MS.gene053256	MS.gene045140	PPI
MS.gene045140	MS.gene24212	PPI
MS.gene025887	MS.gene045140	PPI
MS.gene045140	MS.gene50332	PPI
MS.gene045140	MS.gene024979	PPI
MS.gene75875	MS.gene045140	PPI
MS.gene041470	MS.gene045140	PPI
MS.gene058694	MS.gene045140	PPI
MS.gene045140	MS.gene24826	PPI
MS.gene045140	MS.gene063472	PPI
MS.gene045140	MS.gene43790	PPI
MS.gene015089	MS.gene045140	PPI
MS.gene006710	MS.gene045140	PPI
MS.gene045140	MS.gene034680	PPI
MS.gene58722	MS.gene045140	PPI
MS.gene011679	MS.gene045140	PPI
MS.gene64001	MS.gene045140	PPI
MS.gene57533	MS.gene045140	PPI
MS.gene36704	MS.gene045140	PPI
MS.gene045140	MS.gene88416	PPI
MS.gene032970	MS.gene045140	PPI
MS.gene045140	MS.gene57530	PPI
MS.gene045140	MS.gene003076	PPI
MS.gene77856	MS.gene045140	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045140.t1	MTR_2g024110	53.409	264	99	7	1	242	1	262	5.88e-82	250
MS.gene045140.t1	MTR_5g083940	67.476	206	37	5	1	206	1	176	1.29e-80	245
MS.gene045140.t1	MTR_2g028110	50.735	272	103	8	1	242	1	271	5.03e-76	235
MS.gene045140.t1	MTR_1g068875	50.936	267	103	8	1	242	1	264	8.01e-75	232
MS.gene045140.t1	MTR_2g031680	53.435	262	98	6	4	242	6	266	9.98e-75	232
MS.gene045140.t1	MTR_2g031640	53.008	266	97	8	4	242	6	270	5.49e-74	230
MS.gene045140.t1	MTR_2g031720	51.471	272	101	9	1	242	1	271	3.89e-73	228
MS.gene045140.t1	MTR_4g006270	51.938	258	87	8	1	239	1	240	1.13e-71	224
MS.gene045140.t1	MTR_2g031700	54.585	229	88	4	4	217	6	233	1.55e-71	221
MS.gene045140.t1	MTR_1g068835	49.064	267	109	8	1	242	1	265	4.44e-71	223
MS.gene045140.t1	MTR_1g068860	50.186	269	105	8	1	242	1	267	6.90e-71	222
MS.gene045140.t1	MTR_2g026010	50.916	273	101	8	1	242	1	271	1.46e-69	219
MS.gene045140.t1	MTR_2g028130	47.203	286	103	8	2	240	3	287	2.29e-69	219
MS.gene045140.t1	MTR_3g086970	63.684	190	48	4	1	189	1	170	6.34e-69	210
MS.gene045140.t1	MTR_0667s0010	47.101	276	108	8	4	242	6	280	4.50e-68	216
MS.gene045140.t1	MTR_2g426090	47.292	277	104	8	7	242	9	284	4.18e-67	213
MS.gene045140.t1	MTR_2g425980	45.965	285	109	10	2	242	3	286	8.62e-65	207
MS.gene045140.t1	MTR_2g021050	48.669	263	107	9	2	242	3	259	2.44e-64	205
MS.gene045140.t1	MTR_8g099460	47.426	272	107	10	3	240	4	273	7.08e-64	204
MS.gene045140.t1	MTR_2g426060	45.775	284	108	12	4	242	6	288	3.45e-62	200
MS.gene045140.t1	MTR_2g025420	43.151	292	112	10	4	242	6	296	6.32e-61	197
MS.gene045140.t1	MTR_2g024100	46.970	264	99	9	19	242	22	284	1.92e-60	196
MS.gene045140.t1	MTR_3g083010	44.108	297	108	11	1	242	1	294	3.67e-60	195
MS.gene045140.t1	MTR_2g426020	43.165	278	117	8	4	242	6	281	3.79e-60	195
MS.gene045140.t1	MTR_2g426070	44.251	287	109	11	2	240	3	286	3.39e-57	187
MS.gene045140.t1	MTR_2g028140	42.612	291	113	10	2	239	3	292	4.75e-57	187
MS.gene045140.t1	MTR_2g028160	40.972	288	120	8	2	240	3	289	1.87e-55	183
MS.gene045140.t1	MTR_1g068905	45.643	241	94	7	1	222	1	223	4.67e-54	177
MS.gene045140.t1	MTR_4g070550	41.608	286	119	10	2	240	3	287	5.41e-53	176
MS.gene045140.t1	MTR_4g133170	38.433	268	142	6	1	246	1	267	1.21e-52	175
MS.gene045140.t1	MTR_2g022170	68.595	121	34	2	1	117	1	121	2.20e-51	164
MS.gene045140.t1	MTR_2g025960	42.105	190	75	7	85	242	3	189	1.13e-34	126
MS.gene045140.t1	MTR_2g040050	41.791	201	73	8	64	242	15	193	5.92e-33	120
MS.gene045140.t1	MTR_7g110360	45.833	168	64	4	1	141	36	203	1.26e-31	119
MS.gene045140.t1	MTR_3g014540	25.564	266	172	7	4	243	29	294	5.35e-25	102
MS.gene045140.t1	MTR_4g061340	29.630	270	148	12	4	237	26	289	5.94e-24	99.0
MS.gene045140.t1	MTR_4g031770	27.863	262	165	9	1	239	1	261	1.32e-23	98.2
MS.gene045140.t1	MTR_2g021155	27.203	261	162	9	7	242	39	296	2.25e-22	96.3
MS.gene045140.t1	MTR_3g014570	25.564	266	172	7	4	243	29	294	9.81e-22	93.2
MS.gene045140.t1	MTR_3g007330	28.244	262	156	9	4	239	48	303	1.21e-21	92.8
MS.gene045140.t1	MTR_6g065980	25.969	258	162	8	4	243	16	262	3.06e-21	91.3
MS.gene045140.t1	MTR_3g006670	28.947	266	157	10	4	239	49	312	4.10e-21	91.7
MS.gene045140.t1	MTR_2g021190	27.925	265	157	12	4	239	21	280	4.18e-21	91.3
MS.gene045140.t1	MTR_3g013770	26.766	269	164	11	4	240	33	300	8.98e-21	90.5
MS.gene045140.t1	MTR_3g009240	27.969	261	159	12	4	239	36	292	2.76e-20	89.0
MS.gene045140.t1	MTR_2g021150	27.925	265	159	11	4	239	14	275	5.48e-20	88.2
MS.gene045140.t1	MTR_3g007360	28.333	240	145	9	7	220	55	293	4.45e-19	85.9
MS.gene045140.t1	MTR_3g010390	27.899	276	156	10	4	240	33	304	4.82e-19	85.5
MS.gene045140.t1	MTR_2g029990	26.515	264	160	12	5	239	52	310	5.21e-19	85.5
MS.gene045140.t1	MTR_2g046900	26.545	275	167	10	4	247	28	298	5.84e-19	85.5
MS.gene045140.t1	MTR_3g007410	27.917	240	146	9	7	220	55	293	9.71e-19	84.7
MS.gene045140.t1	MTR_5g011200	25.091	275	165	9	4	245	17	283	1.46e-18	84.0
MS.gene045140.t1	MTR_3g034180	25.818	275	169	11	4	244	123	396	1.60e-18	84.7
MS.gene045140.t1	MTR_0044s0300	24.907	269	154	9	4	239	38	291	1.87e-18	84.0
MS.gene045140.t1	MTR_0760s0010	28.854	253	146	11	10	239	53	294	2.02e-18	84.0
MS.gene045140.t1	MTR_3g007430	26.360	239	150	7	7	220	46	283	2.74e-18	83.6
MS.gene045140.t1	MTR_7g017130	28.014	282	130	13	3	225	17	284	3.61e-18	83.2
MS.gene045140.t1	MTR_7g017170	28.014	282	130	13	3	225	17	284	3.84e-18	83.2
MS.gene045140.t1	MTR_3g013740	26.619	278	161	13	4	240	44	319	4.77e-18	82.8
MS.gene045140.t1	MTR_2g078900	27.376	263	154	14	4	239	33	285	1.19e-17	81.3
MS.gene045140.t1	MTR_8g467140	24.521	261	169	8	4	240	32	288	1.28e-17	80.9
MS.gene045140.t1	MTR_3g036290	27.519	258	154	11	4	239	22	268	1.57e-17	80.9
MS.gene045140.t1	MTR_2g046830	27.509	269	158	10	7	247	28	287	1.66e-17	81.3
MS.gene045140.t1	MTR_1g094210	27.778	270	141	12	4	239	57	306	2.14e-17	80.9
MS.gene045140.t1	MTR_1g094210	27.778	270	141	12	4	239	57	306	2.33e-17	80.9
MS.gene045140.t1	MTR_1g056710	26.800	250	149	10	1	222	31	274	4.59e-17	80.1
MS.gene045140.t1	MTR_1g054725	25.818	275	171	12	1	245	17	288	4.76e-17	79.7
MS.gene045140.t1	MTR_2g437190	50.000	98	42	3	46	136	56	153	5.31e-17	76.3
MS.gene045140.t1	MTR_7g013590	26.820	261	160	11	7	239	39	296	5.53e-17	79.7
MS.gene045140.t1	MTR_3g036430	25.600	250	154	7	1	239	17	245	6.68e-17	79.0
MS.gene045140.t1	MTR_1g055070	27.027	259	149	10	1	220	46	303	7.97e-17	79.3
MS.gene045140.t1	MTR_5g046300	23.954	263	168	10	1	239	1	255	1.30e-16	78.2
MS.gene045140.t1	MTR_5g046290	23.954	263	168	10	1	239	1	255	1.30e-16	78.2
MS.gene045140.t1	MTR_1g097560	26.515	264	155	12	2	240	34	283	1.73e-16	78.2
MS.gene045140.t1	MTR_2g047832	24.579	297	157	10	4	247	29	311	1.86e-16	78.2
MS.gene045140.t1	MTR_2g055970	24.903	257	173	7	4	240	211	467	1.90e-16	78.6
MS.gene045140.t1	MTR_2g046920	26.259	278	156	12	4	247	24	286	2.05e-16	77.8
MS.gene045140.t1	MTR_6g053260	25.632	277	154	11	1	239	334	596	2.26e-16	78.6
MS.gene045140.t1	MTR_1g097330	27.311	238	150	10	4	223	16	248	3.05e-16	77.8
MS.gene045140.t1	MTR_3g006570	25.660	265	166	9	4	242	21	280	3.66e-16	77.4
MS.gene045140.t1	MTR_8g101580	27.170	265	161	13	1	239	42	300	3.86e-16	77.4
MS.gene045140.t1	MTR_3g034160	24.324	259	162	9	4	229	9	266	4.03e-16	77.0
MS.gene045140.t1	MTR_3g103020	26.984	252	136	8	4	221	20	257	4.37e-16	77.0
MS.gene045140.t1	MTR_4g055060	25.275	273	169	11	4	242	30	301	7.10e-16	76.6
MS.gene045140.t1	MTR_4g023120	27.309	249	152	8	3	227	2	245	7.21e-16	76.3
MS.gene045140.t1	MTR_5g022420	28.511	235	142	8	4	221	27	252	9.55e-16	76.3
MS.gene045140.t1	MTR_3g011060	23.571	280	162	9	4	239	28	299	9.75e-16	76.3
MS.gene045140.t1	MTR_4g107820	25.197	254	138	8	2	221	34	269	1.11e-15	75.9
MS.gene045140.t1	MTR_4g107780	25.197	254	138	8	2	221	34	269	1.11e-15	75.9
MS.gene045140.t1	MTR_1g054575	25.468	267	170	10	4	248	52	311	1.13e-15	76.3
MS.gene045140.t1	MTR_4g107820	25.197	254	138	8	2	221	34	269	1.24e-15	75.9
MS.gene045140.t1	MTR_4g107780	25.197	254	138	8	2	221	34	269	1.59e-15	75.5
MS.gene045140.t1	MTR_5g007610	24.621	264	166	6	4	234	41	304	1.69e-15	75.5
MS.gene045140.t1	MTR_1g055375	24.638	276	175	11	1	245	1	274	2.85e-15	74.7
MS.gene045140.t1	MTR_3g086960	92.105	38	3	0	203	240	9	46	4.36e-15	70.9
MS.gene045140.t1	MTR_1g088120	27.336	289	151	12	7	240	13	297	4.53e-15	74.3
MS.gene045140.t1	MTR_3g024040	26.459	257	163	11	10	248	37	285	4.78e-15	73.9
MS.gene045140.t1	MTR_4g023070	26.236	263	162	8	3	242	2	255	4.83e-15	73.9
MS.gene045140.t1	MTR_4g116330	28.862	246	136	10	4	221	23	257	5.13e-15	73.9
MS.gene045140.t1	MTR_8g013010	26.971	241	134	9	4	212	54	284	5.85e-15	73.2
MS.gene045140.t1	MTR_4g019990	25.597	293	166	14	4	247	6	295	6.78e-15	73.6
MS.gene045140.t1	MTR_2g021210	27.652	264	160	10	4	245	84	338	6.78e-15	73.9
MS.gene045140.t1	MTR_3g010590	25.670	261	152	12	4	239	39	282	6.80e-15	73.6
MS.gene045140.t1	MTR_4g023080	25.210	238	146	8	4	220	9	235	1.01e-14	73.2
MS.gene045140.t1	MTR_1g055135	27.092	251	153	11	4	228	13	259	1.04e-14	73.2
MS.gene045140.t1	MTR_1g442850	27.152	302	148	13	1	248	2	285	1.18e-14	72.8
MS.gene045140.t1	MTR_7g077990	26.923	286	146	14	4	240	17	288	1.65e-14	72.8
MS.gene045140.t1	MTR_3g058440	25.641	273	156	11	1	232	32	298	1.68e-14	72.0
MS.gene045140.t1	MTR_4g108820	24.454	229	139	9	4	223	42	245	1.72e-14	72.0
MS.gene045140.t1	MTR_7g056570	29.592	294	139	12	4	248	18	292	1.83e-14	72.4
MS.gene045140.t1	MTR_3g011100	25.912	274	164	10	4	242	235	504	1.92e-14	72.8
MS.gene045140.t1	MTR_1g097490	27.799	259	158	10	4	239	49	301	2.20e-14	72.0
MS.gene045140.t1	MTR_6g004660	25.632	277	165	9	4	242	16	289	2.36e-14	72.0
MS.gene045140.t1	MTR_7g070440	25.410	244	153	9	4	220	7	248	2.71e-14	72.0
MS.gene045140.t1	MTR_3g007300	27.273	231	136	10	1	219	46	256	2.78e-14	71.6
MS.gene045140.t1	MTR_3g006530	24.818	274	158	12	4	240	40	302	3.03e-14	72.0
MS.gene045140.t1	MTR_3g007270	23.913	276	167	9	4	239	47	319	3.23e-14	71.6
MS.gene045140.t1	MTR_4g102410	26.022	269	146	11	4	220	61	328	3.42e-14	71.6
MS.gene045140.t1	MTR_5g057710	23.985	271	159	9	4	238	46	305	3.75e-14	71.6
MS.gene045140.t1	MTR_3g009310	24.254	268	164	8	4	239	42	302	3.99e-14	71.6
MS.gene045140.t1	MTR_4g094365	26.007	273	165	10	4	247	8	272	4.17e-14	71.2
MS.gene045140.t1	MTR_4g023090	24.900	249	141	8	4	220	16	250	4.99e-14	71.2
MS.gene045140.t1	MTR_2g461450	25.373	268	173	9	1	248	15	275	5.13e-14	70.9
MS.gene045140.t1	MTR_3g034130	24.088	274	173	12	4	243	9	281	7.51e-14	70.5
MS.gene045140.t1	MTR_3g010870	24.809	262	160	8	4	239	37	287	9.59e-14	70.5
MS.gene045140.t1	MTR_8g073550	28.571	189	109	7	4	169	30	215	1.09e-13	68.6
MS.gene045140.t1	MTR_4g122850	27.160	243	131	12	15	221	12	244	1.13e-13	70.1
MS.gene045140.t1	MTR_4g023440	30.233	215	116	11	4	193	18	223	1.37e-13	69.7
MS.gene045140.t1	MTR_2g047892	24.497	298	156	10	4	247	22	304	1.49e-13	69.7
MS.gene045140.t1	MTR_5g096710	27.481	262	138	12	4	221	23	276	1.58e-13	69.7
MS.gene045140.t1	MTR_4g030830	25.352	284	161	12	2	238	7	286	1.81e-13	69.7
MS.gene045140.t1	MTR_3g009300	27.481	262	129	12	7	240	37	265	2.84e-13	68.9
MS.gene045140.t1	MTR_5g057790	24.907	269	159	9	4	238	46	305	2.97e-13	68.9
MS.gene045140.t1	MTR_3g058470	28.218	202	108	8	1	168	34	232	3.09e-13	68.9
MS.gene045140.t1	MTR_3g024150	27.206	272	138	14	7	239	38	288	3.21e-13	68.9
MS.gene045140.t1	MTR_4g030090	27.055	292	158	15	5	248	15	299	3.93e-13	68.6
MS.gene045140.t1	MTR_2g078850	23.077	260	174	11	7	243	33	289	4.01e-13	68.6
MS.gene045140.t1	MTR_7g056003	25.738	237	115	9	7	197	18	239	5.31e-13	68.2
MS.gene045140.t1	MTR_7g061060	23.906	297	159	9	4	248	13	294	5.45e-13	68.2
MS.gene045140.t1	MTR_6g027910	25.806	279	157	16	7	239	12	286	7.25e-13	67.8
MS.gene045140.t1	MTR_3g058480	27.500	240	127	10	1	197	36	271	7.78e-13	67.4
MS.gene045140.t1	MTR_7g079160	26.168	321	139	15	7	240	11	320	8.64e-13	67.8
MS.gene045140.t1	MTR_5g009060	24.828	290	164	11	4	240	25	313	1.09e-12	67.4
MS.gene045140.t1	MTR_4g116330	29.680	219	116	9	4	194	23	231	1.14e-12	67.0
MS.gene045140.t1	MTR_3g010920	25.781	256	153	11	4	239	44	282	1.89e-12	66.6
MS.gene045140.t1	MTR_3g083640	26.415	265	159	11	1	239	52	306	1.96e-12	66.6
MS.gene045140.t1	MTR_3g464470	26.606	218	132	10	4	198	7	219	2.00e-12	66.6
MS.gene045140.t1	MTR_4g023130	25.221	226	120	7	4	220	9	194	2.06e-12	65.9
MS.gene045140.t1	MTR_8g464770	27.099	262	135	14	4	219	12	263	2.25e-12	66.2
MS.gene045140.t1	MTR_7g061050	26.457	223	125	6	4	196	13	226	2.41e-12	66.2
MS.gene045140.t1	MTR_2g025995	70.455	44	13	0	4	47	6	49	2.47e-12	65.1
MS.gene045140.t1	MTR_7g007300	26.515	264	148	11	4	239	103	348	2.67e-12	66.2
MS.gene045140.t1	MTR_5g046260	23.922	255	148	9	1	239	1	225	2.94e-12	65.5
MS.gene045140.t1	MTR_7g061090	26.384	307	151	14	4	248	22	315	3.19e-12	65.9
MS.gene045140.t1	MTR_4g013180	25.087	287	155	13	5	240	12	289	3.74e-12	65.9
MS.gene045140.t1	MTR_7g055987	25.979	281	156	11	7	248	23	290	3.80e-12	65.5
MS.gene045140.t1	MTR_7g066850	25.714	280	150	11	4	238	23	289	3.90e-12	65.9
MS.gene045140.t1	MTR_7g066840	24.000	300	154	12	4	246	23	305	4.09e-12	65.5
MS.gene045140.t1	MTR_3g010430	25.000	280	151	11	4	242	36	297	4.47e-12	65.5
MS.gene045140.t1	MTR_7g078840	24.837	306	159	13	5	240	11	315	5.23e-12	65.5
MS.gene045140.t1	MTR_2g048580	26.160	237	142	10	4	221	8	230	5.28e-12	65.1
MS.gene045140.t1	MTR_4g117780	27.542	236	138	10	1	212	8	234	5.31e-12	65.1
MS.gene045140.t1	MTR_0054s0090	26.374	273	142	11	4	220	17	286	6.44e-12	65.1
MS.gene045140.t1	MTR_8g046310	27.132	258	150	10	1	225	13	265	6.49e-12	65.1
MS.gene045140.t1	MTR_2g021252	23.864	264	161	10	7	245	50	298	6.90e-12	64.7
MS.gene045140.t1	MTR_3g010870	27.692	195	106	6	4	173	37	221	7.30e-12	64.3
MS.gene045140.t1	MTR_3g464500	26.364	220	133	10	4	198	27	242	8.32e-12	64.7
MS.gene045140.t1	MTR_6g013270	24.908	273	163	11	4	242	29	293	9.09e-12	64.7
MS.gene045140.t1	MTR_1g007410	26.103	272	141	12	4	220	22	288	1.05e-11	64.3
MS.gene045140.t1	MTR_6g053240	23.571	280	161	12	1	239	25	292	1.21e-11	64.3
MS.gene045140.t1	MTR_7g078860	24.221	289	160	8	5	240	10	292	1.28e-11	63.9
MS.gene045140.t1	MTR_0129s0070	24.719	267	144	13	4	220	17	276	1.58e-11	63.9
MS.gene045140.t1	MTR_4g109270	31.383	188	95	9	3	166	7	184	1.74e-11	63.5
MS.gene045140.t1	MTR_4g116340	26.829	205	123	9	7	193	39	234	2.09e-11	62.4
MS.gene045140.t1	MTR_1g115160	25.194	258	159	13	4	239	22	267	2.18e-11	63.2
MS.gene045140.t1	MTR_6g048120	24.823	282	151	13	4	239	36	302	2.25e-11	63.5
MS.gene045140.t1	MTR_0242s0060	24.916	297	150	12	4	238	9	294	2.42e-11	63.2
MS.gene045140.t1	MTR_0242s0040	24.916	297	150	12	4	238	9	294	2.42e-11	63.2
MS.gene045140.t1	MTR_7g060940	28.054	221	116	9	4	196	22	227	2.59e-11	63.2
MS.gene045140.t1	MTR_5g070130	30.899	178	101	6	7	165	14	188	2.67e-11	63.2
MS.gene045140.t1	MTR_4g024890	34.109	129	61	5	5	110	11	138	2.68e-11	63.2
MS.gene045140.t1	MTR_6g060650	27.888	251	144	9	4	221	8	254	2.77e-11	63.2
MS.gene045140.t1	MTR_1g022200	23.200	250	168	5	1	226	12	261	3.78e-11	62.8
MS.gene045140.t1	MTR_7g016930	25.726	241	141	9	4	214	16	248	4.38e-11	62.4
MS.gene045140.t1	MTR_7g017040	28.936	235	111	14	4	191	16	241	5.06e-11	62.4
MS.gene045140.t1	MTR_7g066010	22.814	263	157	7	4	220	21	283	5.42e-11	62.0
MS.gene045140.t1	MTR_6g021880	26.275	255	152	12	15	236	31	282	5.62e-11	62.0
MS.gene045140.t1	MTR_5g097210	28.163	245	139	11	4	220	9	244	7.44e-11	61.6
MS.gene045140.t1	MTR_7g070830	24.468	282	150	12	2	221	19	299	8.39e-11	61.6
MS.gene045140.t1	MTR_4g024870	28.495	186	108	7	5	166	45	229	8.52e-11	61.6
MS.gene045140.t1	MTR_8g032390	24.473	237	140	6	4	221	40	256	9.36e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045140.t1	AT4G12560	29.496	278	159	12	1	242	1	277	1.75e-24	100
MS.gene045140.t1	AT4G12560	29.496	278	159	12	1	242	1	277	1.75e-24	100
MS.gene045140.t1	AT4G12560	29.496	278	159	12	1	242	1	277	1.75e-24	100
MS.gene045140.t1	AT3G06240	26.882	279	135	9	4	221	36	306	9.82e-20	87.8
MS.gene045140.t1	AT2G27520	31.466	232	124	9	3	220	5	215	3.33e-16	77.4
MS.gene045140.t1	AT4G22390	28.125	224	128	9	1	193	1	222	1.00e-15	76.3
MS.gene045140.t1	AT4G22390	24.911	281	176	11	1	248	1	279	1.12e-15	76.3
MS.gene045140.t1	AT3G17530	26.939	245	147	10	1	220	3	240	1.27e-15	75.9
MS.gene045140.t1	AT3G21170	26.087	276	160	10	2	239	5	274	7.03e-15	73.6
MS.gene045140.t1	AT3G22730	26.378	254	161	7	1	234	3	250	2.17e-13	69.3
MS.gene045140.t1	AT4G10190	27.197	239	149	10	3	220	8	242	2.84e-13	68.9
MS.gene045140.t1	AT1G12870	26.415	265	134	11	2	222	31	278	3.00e-13	68.9
MS.gene045140.t1	AT3G10430	27.273	231	149	8	2	217	3	229	4.44e-13	68.6
MS.gene045140.t1	AT1G32600	27.807	187	105	9	47	220	3	172	8.53e-13	67.0
MS.gene045140.t1	AT3G52320	25.417	240	156	7	1	220	24	260	1.17e-12	67.4
MS.gene045140.t1	AT2G04920	27.984	243	145	11	1	220	1	236	2.61e-12	66.2
MS.gene045140.t1	AT3G22700	25.101	247	156	9	1	223	2	243	3.77e-12	65.5
MS.gene045140.t1	AT3G08750	25.974	231	148	9	1	217	9	230	4.33e-12	65.5
MS.gene045140.t1	AT3G17480	25.306	245	141	8	1	214	9	242	1.91e-11	63.5
MS.gene045140.t1	AT1G47390	30.508	177	104	7	2	166	5	174	2.22e-11	63.5
MS.gene045140.t1	AT3G16210	24.464	233	145	9	4	220	5	222	2.41e-11	63.2

Find 60 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCTCTCTTGTATCTATTTC+AGG	0.179554	3.1:+69731389	None:intergenic
ACGGCCTTGATATCGCTTTC+TGG	0.193114	3.1:-69731757	MS.gene045140:CDS
GATTAAATGTGTTTCGCTTT+TGG	0.248289	3.1:-69731369	MS.gene045140:CDS
GAGTGATGATTACGGGTGTT+AGG	0.301404	3.1:+69731731	None:intergenic
CGAATTGCGGTGGTTAGGTT+AGG	0.301996	3.1:+69731848	None:intergenic
TCAGCTTCAAAACTAATTCA+TGG	0.306441	3.1:-69731574	MS.gene045140:CDS
GAAATCGAGTTGGTAGAAAT+TGG	0.311149	3.1:+69731871	None:intergenic
GAAGTTGTGGGAATCGATTA+TGG	0.340616	3.1:+69731949	None:intergenic
TGAAATCCTCTCCCGCTTAC+CGG	0.365871	3.1:-69732017	MS.gene045140:CDS
TAATTCATGGAAAGTACTTT+CGG	0.397495	3.1:-69731561	MS.gene045140:CDS
TATTTCGTCACCTGAAACCA+TGG	0.403375	3.1:-69731525	MS.gene045140:CDS
CACTCCATCCCTCACATAAT+CGG	0.411999	3.1:-69731713	MS.gene045140:CDS
TTCGAATCAACTATCCTTTG+AGG	0.429552	3.1:-69731829	MS.gene045140:CDS
AGGGGTGACATCTATCTCCT+TGG	0.434127	3.1:-69731809	MS.gene045140:CDS
TACAAACTTCTCAGAATCTC+TGG	0.436159	3.1:-69731647	MS.gene045140:CDS
GAGGGATTGCACCGGTAAGC+GGG	0.445609	3.1:+69732006	None:intergenic
AGGGATGGAGTGATGATTAC+GGG	0.451460	3.1:+69731724	None:intergenic
GAATTGCGGTGGTTAGGTTA+GGG	0.463201	3.1:+69731849	None:intergenic
TGATTCGAATTGCGGTGGTT+AGG	0.471462	3.1:+69731843	None:intergenic
AGTGATGATTACGGGTGTTA+GGG	0.480544	3.1:+69731732	None:intergenic
CTTGTATCTATTTCAGGAAG+AGG	0.483511	3.1:+69731395	None:intergenic
TCGAATCAACTATCCTTTGA+GGG	0.492239	3.1:-69731828	MS.gene045140:CDS
GAGGGATGGAGTGATGATTA+CGG	0.495477	3.1:+69731723	None:intergenic
AAGTTGATCGGAATCGGAGG+AGG	0.503234	3.1:+69731987	None:intergenic
ATTGCACCGGTAAGCGGGAG+AGG	0.515069	3.1:+69732011	None:intergenic
GGTTCCAGAAAGCGATATCA+AGG	0.517991	3.1:+69731753	None:intergenic
GTAGCGAAAGTGTGGTGCTT+TGG	0.520871	3.1:+69731611	None:intergenic
CACATAATCGGTGGTGTCAG+TGG	0.547213	3.1:-69731701	MS.gene045140:CDS
AGGATAGTTGATTCGAATTG+CGG	0.555790	3.1:+69731835	None:intergenic
ATTTCGTCACCTGAAACCAT+GGG	0.555872	3.1:-69731524	MS.gene045140:CDS
TATCTCCTTGGTTCATGCAA+CGG	0.556612	3.1:-69731797	MS.gene045140:CDS
GGAGGGATTGCACCGGTAAG+CGG	0.565081	3.1:+69732005	None:intergenic
CTTGTGTTATGTTAAACGCA+AGG	0.568358	3.1:+69731435	None:intergenic
AGTGAAGGTTAGTGAAGTTG+TGG	0.573595	3.1:+69731936	None:intergenic
CAAGGCCGTTAGAGATGCAT+AGG	0.574361	3.1:+69731771	None:intergenic
AGAAATTGGAGTGGTGGAGA+AGG	0.582510	3.1:+69731885	None:intergenic
GGCCGTTAGAGATGCATAGG+AGG	0.585610	3.1:+69731774	None:intergenic
AGATAGATGTCACCCCTCAA+AGG	0.590584	3.1:+69731815	None:intergenic
GTTGGTAGAAATTGGAGTGG+TGG	0.596367	3.1:+69731879	None:intergenic
TTAGGTTAGGGAAATCGAGT+TGG	0.599385	3.1:+69731861	None:intergenic
TTGAAGTTGATCGGAATCGG+AGG	0.611579	3.1:+69731984	None:intergenic
GTGAAGGTTAGTGAAGTTGT+GGG	0.611975	3.1:+69731937	None:intergenic
CGAATCAACTATCCTTTGAG+GGG	0.613639	3.1:-69731827	MS.gene045140:CDS
TGGAGTGGTGGAGAAGGATG+AGG	0.615741	3.1:+69731891	None:intergenic
AGTTGATCGGAATCGGAGGA+GGG	0.616474	3.1:+69731988	None:intergenic
ACCACCGATTATGTGAGGGA+TGG	0.632773	3.1:+69731709	None:intergenic
ATTTCAGTGAATAAATCTGA+CGG	0.643833	3.1:+69732034	None:intergenic
ATAGTTGATTCGAATTGCGG+TGG	0.645324	3.1:+69731838	None:intergenic
TCCATCCCTCACATAATCGG+TGG	0.663170	3.1:-69731710	MS.gene045140:CDS
TTTCGTCACCTGAAACCATG+GGG	0.665249	3.1:-69731523	MS.gene045140:CDS
CTGACACCACCGATTATGTG+AGG	0.667554	3.1:+69731704	None:intergenic
TGACACCACCGATTATGTGA+GGG	0.668003	3.1:+69731705	None:intergenic
CGAGTTGGTAGAAATTGGAG+TGG	0.671959	3.1:+69731876	None:intergenic
GGCCTCCTATGCATCTCTAA+CGG	0.672081	3.1:-69731776	MS.gene045140:CDS
TCACTTGCGTAGCGAAAGTG+TGG	0.674991	3.1:+69731603	None:intergenic
TCAGGTGACGAAATAACGTA+CGG	0.678412	3.1:+69731533	None:intergenic
AACACAAGAGATATTCAATG+AGG	0.684796	3.1:-69731420	MS.gene045140:CDS
GGAGGCCGTTGCATGAACCA+AGG	0.689413	3.1:+69731792	None:intergenic
AATCGGAGGAGGGATTGCAC+CGG	0.690273	3.1:+69731998	None:intergenic
TTCGTCACCTGAAACCATGG+GGG	0.706521	3.1:-69731522	MS.gene045140:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAACTAATAAGTTTGATGTT+TGG	-	chr3.1:69731964-69731983	MS.gene045140:CDS	20.0%
!!	AACTAATAAGTTTGATGTTT+GGG	-	chr3.1:69731965-69731984	MS.gene045140:CDS	20.0%
!!!	GTAAATTGTTTACTTTTGTA+GGG	-	chr3.1:69732021-69732040	MS.gene045140:CDS	20.0%
!!!	TGTAAATTGTTTACTTTTGT+AGG	-	chr3.1:69732020-69732039	MS.gene045140:CDS	20.0%
!	AATATGGATTTAGAGATAGT+TGG	-	chr3.1:69731997-69732016	MS.gene045140:CDS	25.0%
!	ATTTCAGTGAATAAATCTGA+CGG	+	chr3.1:69731243-69731262	None:intergenic	25.0%
!!!	ATTAAATGTGTTTCGCTTTT+GGG	-	chr3.1:69731906-69731925	MS.gene045140:CDS	25.0%
!!!	TAAGTGATTTTGAAGTTGAT+CGG	+	chr3.1:69731302-69731321	None:intergenic	25.0%
!!!	TAATTCATGGAAAGTACTTT+CGG	-	chr3.1:69731713-69731732	MS.gene045140:CDS	25.0%
	AACACAAGAGATATTCAATG+AGG	-	chr3.1:69731854-69731873	MS.gene045140:CDS	30.0%
	ATCTCTCTTGTATCTATTTC+AGG	+	chr3.1:69731888-69731907	None:intergenic	30.0%
	TCAGCTTCAAAACTAATTCA+TGG	-	chr3.1:69731700-69731719	MS.gene045140:CDS	30.0%
!	GATTAAATGTGTTTCGCTTT+TGG	-	chr3.1:69731905-69731924	MS.gene045140:CDS	30.0%
!	TGCTGAGAATTCTTTTCATT+GGG	-	chr3.1:69731779-69731798	MS.gene045140:CDS	30.0%
!!!	ATTTTGAAGTTGATCGGAAT+CGG	+	chr3.1:69731296-69731315	None:intergenic	30.0%
!!!	TGAATGAGTTTTTGAAGTGA+AGG	+	chr3.1:69731356-69731375	None:intergenic	30.0%
	CTTGTATCTATTTCAGGAAG+AGG	+	chr3.1:69731882-69731901	None:intergenic	35.0%
	CTTGTGTTATGTTAAACGCA+AGG	+	chr3.1:69731842-69731861	None:intergenic	35.0%
	GTTTGGGTGATGAAAGAATA+TGG	-	chr3.1:69731981-69732000	MS.gene045140:CDS	35.0%
	TACAAACTTCTCAGAATCTC+TGG	-	chr3.1:69731627-69731646	MS.gene045140:CDS	35.0%
	TCGAATCAACTATCCTTTGA+GGG	-	chr3.1:69731446-69731465	MS.gene045140:CDS	35.0%
	TTCGAATCAACTATCCTTTG+AGG	-	chr3.1:69731445-69731464	MS.gene045140:CDS	35.0%
!	GTGCTGAGAATTCTTTTCAT+TGG	-	chr3.1:69731778-69731797	MS.gene045140:CDS	35.0%
!!	AGGATAGTTGATTCGAATTG+CGG	+	chr3.1:69731442-69731461	None:intergenic	35.0%
!!	GAAATCGAGTTGGTAGAAAT+TGG	+	chr3.1:69731406-69731425	None:intergenic	35.0%
!!	TGTTTACTTTTGTAGGGCAA+TGG	-	chr3.1:69732027-69732046	MS.gene045140:CDS	35.0%
	AGTGAAGGTTAGTGAAGTTG+TGG	+	chr3.1:69731341-69731360	None:intergenic	40.0%
	AGTGATGATTACGGGTGTTA+GGG	+	chr3.1:69731545-69731564	None:intergenic	40.0%
	ATTTCGTCACCTGAAACCAT+GGG	-	chr3.1:69731750-69731769	MS.gene045140:CDS	40.0%
	CGAATCAACTATCCTTTGAG+GGG	-	chr3.1:69731447-69731466	MS.gene045140:CDS	40.0%
	GAAGTTGTGGGAATCGATTA+TGG	+	chr3.1:69731328-69731347	None:intergenic	40.0%
	GTGAAGGTTAGTGAAGTTGT+GGG	+	chr3.1:69731340-69731359	None:intergenic	40.0%
	TATCTCCTTGGTTCATGCAA+CGG	-	chr3.1:69731477-69731496	MS.gene045140:CDS	40.0%
	TATTTCGTCACCTGAAACCA+TGG	-	chr3.1:69731749-69731768	MS.gene045140:CDS	40.0%
	TCAGGTGACGAAATAACGTA+CGG	+	chr3.1:69731744-69731763	None:intergenic	40.0%
	TTAGGTTAGGGAAATCGAGT+TGG	+	chr3.1:69731416-69731435	None:intergenic	40.0%
!!	ATAGTTGATTCGAATTGCGG+TGG	+	chr3.1:69731439-69731458	None:intergenic	40.0%
!!	TTACTTTTGTAGGGCAATGG+TGG	-	chr3.1:69732030-69732049	MS.gene045140:CDS	40.0%
	AGATAGATGTCACCCCTCAA+AGG	+	chr3.1:69731462-69731481	None:intergenic	45.0%
	AGGGATGGAGTGATGATTAC+GGG	+	chr3.1:69731553-69731572	None:intergenic	45.0%
	CACTCCATCCCTCACATAAT+CGG	-	chr3.1:69731561-69731580	MS.gene045140:CDS	45.0%
	GAATTGCGGTGGTTAGGTTA+GGG	+	chr3.1:69731428-69731447	None:intergenic	45.0%
	GAGGGATGGAGTGATGATTA+CGG	+	chr3.1:69731554-69731573	None:intergenic	45.0%
	GAGTGATGATTACGGGTGTT+AGG	+	chr3.1:69731546-69731565	None:intergenic	45.0%
	GGTTCCAGAAAGCGATATCA+AGG	+	chr3.1:69731524-69731543	None:intergenic	45.0%
	TGATTCGAATTGCGGTGGTT+AGG	+	chr3.1:69731434-69731453	None:intergenic	45.0%
	TTTCGTCACCTGAAACCATG+GGG	-	chr3.1:69731751-69731770	MS.gene045140:CDS	45.0%
!	AGAAATTGGAGTGGTGGAGA+AGG	+	chr3.1:69731392-69731411	None:intergenic	45.0%
!	GTTGGTAGAAATTGGAGTGG+TGG	+	chr3.1:69731398-69731417	None:intergenic	45.0%
!	TGACACCACCGATTATGTGA+GGG	+	chr3.1:69731572-69731591	None:intergenic	45.0%
!	TTGAAGTTGATCGGAATCGG+AGG	+	chr3.1:69731293-69731312	None:intergenic	45.0%
!!	CGAGTTGGTAGAAATTGGAG+TGG	+	chr3.1:69731401-69731420	None:intergenic	45.0%
	ACGGCCTTGATATCGCTTTC+TGG	-	chr3.1:69731517-69731536	MS.gene045140:CDS	50.0%
	AGGGGTGACATCTATCTCCT+TGG	-	chr3.1:69731465-69731484	MS.gene045140:CDS	50.0%
	AGTTGATCGGAATCGGAGGA+GGG	+	chr3.1:69731289-69731308	None:intergenic	50.0%
	ATTCTCAGCACAAACCCCCA+TGG	+	chr3.1:69731769-69731788	None:intergenic	50.0%
	CAAGGCCGTTAGAGATGCAT+AGG	+	chr3.1:69731506-69731525	None:intergenic	50.0%
	CGAATTGCGGTGGTTAGGTT+AGG	+	chr3.1:69731429-69731448	None:intergenic	50.0%
	GGCCTCCTATGCATCTCTAA+CGG	-	chr3.1:69731498-69731517	MS.gene045140:CDS	50.0%
	TCACTTGCGTAGCGAAAGTG+TGG	+	chr3.1:69731674-69731693	None:intergenic	50.0%
	TCCATCCCTCACATAATCGG+TGG	-	chr3.1:69731564-69731583	MS.gene045140:CDS	50.0%
	TGAAATCCTCTCCCGCTTAC+CGG	-	chr3.1:69731257-69731276	MS.gene045140:intron	50.0%
	TTCGTCACCTGAAACCATGG+GGG	-	chr3.1:69731752-69731771	MS.gene045140:CDS	50.0%
!	AAGTTGATCGGAATCGGAGG+AGG	+	chr3.1:69731290-69731309	None:intergenic	50.0%
!	ACCACCGATTATGTGAGGGA+TGG	+	chr3.1:69731568-69731587	None:intergenic	50.0%
!	CACATAATCGGTGGTGTCAG+TGG	-	chr3.1:69731573-69731592	MS.gene045140:CDS	50.0%
!	CTGACACCACCGATTATGTG+AGG	+	chr3.1:69731573-69731592	None:intergenic	50.0%
!	GTAGCGAAAGTGTGGTGCTT+TGG	+	chr3.1:69731666-69731685	None:intergenic	50.0%
	AATCGGAGGAGGGATTGCAC+CGG	+	chr3.1:69731279-69731298	None:intergenic	55.0%
	GCACAAACCCCCATGGTTTC+AGG	+	chr3.1:69731762-69731781	None:intergenic	55.0%
	GGCCGTTAGAGATGCATAGG+AGG	+	chr3.1:69731503-69731522	None:intergenic	55.0%
!	TGGAGTGGTGGAGAAGGATG+AGG	+	chr3.1:69731386-69731405	None:intergenic	55.0%
	GGAGGCCGTTGCATGAACCA+AGG	+	chr3.1:69731485-69731504	None:intergenic	60.0%
!	ATTGCACCGGTAAGCGGGAG+AGG	+	chr3.1:69731266-69731285	None:intergenic	60.0%
!	GAGGGATTGCACCGGTAAGC+GGG	+	chr3.1:69731271-69731290	None:intergenic	60.0%
!	GGAGGGATTGCACCGGTAAG+CGG	+	chr3.1:69731272-69731291	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	69731228	69732068	69731228	ID=MS.gene045140
chr3.1	mRNA	69731228	69732068	69731228	ID=MS.gene045140.t1;Parent=MS.gene045140
chr3.1	exon	69731349	69732068	69731349	ID=MS.gene045140.t1.exon1;Parent=MS.gene045140.t1
chr3.1	CDS	69731349	69732068	69731349	ID=cds.MS.gene045140.t1;Parent=MS.gene045140.t1
chr3.1	exon	69731228	69731254	69731228	ID=MS.gene045140.t1.exon2;Parent=MS.gene045140.t1
chr3.1	CDS	69731228	69731254	69731228	ID=cds.MS.gene045140.t1;Parent=MS.gene045140.t1

Gene Sequence

>MS.gene045140

ATGTCTGATATTCCGTCAGATTTATTCACTGAAATCCTCTCCCGCTTACCGGTGCAATCCCTCCTCCGATTCCGATCAACTTCAAAATCACTTAAATCCATAATCGATTCCCACAACTTCACTAACCTTCACTTCAAAAACTCATTCAACTTCAACCTCATCCTTCTCCACCACTCCAATTTCTACCAACTCGATTTCCCTAACCTAACCACCGCAATTCGAATCAACTATCCTTTGAGGGGTGACATCTATCTCCTTGGTTCATGCAACGGCCTCCTATGCATCTCTAACGGCCTTGATATCGCTTTCTGGAACCCTAACACCCGTAATCATCACTCCATCCCTCACATAATCGGTGGTGTCAGTGGCAGCTTTGCTTTCTATCAATTCGCTGACGATTACAAACTTCTCAGAATCTCTGGTTGTTTAATTGATCCAAAGCACCACACTTTCGCTACGCAAGTGACACTCTTCAGCTTCAAAACTAATTCATGGAAAGTACTTTCGGATATACCGTACGTTATTTCGTCACCTGAAACCATGGGGGTTTGTGCTGAGAATTCTTTTCATTGGGTAGTGACTGCGAATCTTTATACTTATACGTGTTTAATCCTTGCGTTTAACATAACACAAGAGATATTCAATGAGGTTCCTCTTCCTGAAATAGATACAAGAGAGATTAAATGTGTTTCGCTTTTGGGAAAGTGTCTTTGCATCACTGTGAGTTATTGTTATCAAACTAATAAGTTTGATGTTTGGGTGATGAAAGAATATGGATTTAGAGATAGTTGGTGTAAATTGTTTACTTTTGTAGGGCAATGGTGGTTCAAATCACCTTTAA

Protein sequence

>MS.gene045140.t1

MSDIPSDLFTEILSRLPVQSLLRFRSTSKSLKSIIDSHNFTNLHFKNSFNFNLILLHHSNFYQLDFPNLTTAIRINYPLRGDIYLLGSCNGLLCISNGLDIAFWNPNTRNHHSIPHIIGGVSGSFAFYQFADDYKLLRISGCLIDPKHHTFATQVTLFSFKTNSWKVLSDIPYVISSPETMGVCAENSFHWVVTANLYTYTCLILAFNITQEIFNEVPLPEIDTREIKCVSLLGKCLCITGNGGSNHL