Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03060.t1 | XP_013441647.1 | 71.3 | 289 | 70 | 4 | 1 | 277 | 1 | 288 | 1.60E-111 | 412.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03060.t1 | Q9SU30 | 32.7 | 303 | 157 | 11 | 3 | 277 | 2 | 285 | 1.3e-29 | 131.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03060.t1 | A0A072TE54 | 71.3 | 289 | 70 | 4 | 1 | 277 | 1 | 288 | 1.1e-111 | 412.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03060.t1 | MTR_0667s0010 | 71.280 | 289 | 70 | 4 | 1 | 277 | 1 | 288 | 1.18e-144 | 412 |
MS.gene03060.t1 | MTR_2g028130 | 68.792 | 298 | 71 | 5 | 1 | 277 | 1 | 297 | 3.45e-135 | 389 |
MS.gene03060.t1 | MTR_2g028110 | 70.714 | 280 | 75 | 4 | 3 | 277 | 2 | 279 | 1.53e-131 | 378 |
MS.gene03060.t1 | MTR_2g425980 | 66.327 | 294 | 82 | 3 | 1 | 277 | 1 | 294 | 1.50e-128 | 372 |
MS.gene03060.t1 | MTR_2g028140 | 65.017 | 303 | 80 | 6 | 1 | 277 | 1 | 303 | 9.59e-127 | 367 |
MS.gene03060.t1 | MTR_2g426090 | 66.781 | 292 | 82 | 6 | 1 | 277 | 1 | 292 | 9.99e-125 | 362 |
MS.gene03060.t1 | MTR_2g426060 | 65.101 | 298 | 81 | 7 | 1 | 277 | 1 | 296 | 9.04e-124 | 359 |
MS.gene03060.t1 | MTR_4g070550 | 63.973 | 297 | 87 | 5 | 1 | 277 | 1 | 297 | 7.75e-123 | 357 |
MS.gene03060.t1 | MTR_2g426070 | 64.527 | 296 | 85 | 7 | 1 | 277 | 1 | 295 | 9.97e-123 | 356 |
MS.gene03060.t1 | MTR_8g099460 | 68.310 | 284 | 82 | 4 | 1 | 277 | 1 | 283 | 3.98e-122 | 355 |
MS.gene03060.t1 | MTR_2g426020 | 64.828 | 290 | 88 | 6 | 1 | 277 | 1 | 289 | 4.59e-122 | 355 |
MS.gene03060.t1 | MTR_2g025420 | 63.607 | 305 | 82 | 7 | 1 | 277 | 1 | 304 | 9.56e-122 | 355 |
MS.gene03060.t1 | MTR_3g083010 | 62.623 | 305 | 84 | 8 | 1 | 277 | 1 | 303 | 2.69e-120 | 351 |
MS.gene03060.t1 | MTR_2g024100 | 66.790 | 271 | 77 | 2 | 20 | 277 | 22 | 292 | 1.29e-117 | 343 |
MS.gene03060.t1 | MTR_2g028160 | 60.667 | 300 | 94 | 6 | 1 | 277 | 1 | 299 | 2.21e-117 | 343 |
MS.gene03060.t1 | MTR_2g021050 | 61.856 | 291 | 73 | 5 | 1 | 277 | 1 | 267 | 8.23e-111 | 325 |
MS.gene03060.t1 | MTR_2g031640 | 58.763 | 291 | 92 | 8 | 1 | 277 | 1 | 277 | 1.52e-107 | 317 |
MS.gene03060.t1 | MTR_2g031720 | 59.655 | 290 | 86 | 9 | 5 | 277 | 6 | 281 | 2.05e-104 | 310 |
MS.gene03060.t1 | MTR_1g068835 | 58.947 | 285 | 94 | 7 | 3 | 277 | 2 | 273 | 4.76e-102 | 303 |
MS.gene03060.t1 | MTR_2g031680 | 59.582 | 287 | 93 | 6 | 1 | 277 | 1 | 274 | 6.02e-100 | 298 |
MS.gene03060.t1 | MTR_1g068875 | 57.597 | 283 | 100 | 5 | 3 | 277 | 2 | 272 | 9.93e-95 | 284 |
MS.gene03060.t1 | MTR_2g026010 | 56.701 | 291 | 97 | 7 | 3 | 277 | 2 | 279 | 4.99e-94 | 283 |
MS.gene03060.t1 | MTR_2g031700 | 60.569 | 246 | 83 | 5 | 1 | 245 | 1 | 233 | 1.20e-92 | 276 |
MS.gene03060.t1 | MTR_1g068860 | 56.294 | 286 | 102 | 7 | 3 | 277 | 2 | 275 | 1.24e-91 | 276 |
MS.gene03060.t1 | MTR_2g024110 | 51.379 | 290 | 110 | 9 | 3 | 277 | 2 | 275 | 2.82e-87 | 265 |
MS.gene03060.t1 | MTR_2g025960 | 64.141 | 198 | 62 | 3 | 88 | 277 | 1 | 197 | 6.73e-83 | 252 |
MS.gene03060.t1 | MTR_4g133170 | 43.214 | 280 | 144 | 4 | 3 | 277 | 2 | 271 | 1.76e-70 | 223 |
MS.gene03060.t1 | MTR_4g006270 | 44.406 | 286 | 117 | 9 | 3 | 277 | 2 | 256 | 1.10e-65 | 211 |
MS.gene03060.t1 | MTR_1g068905 | 48.763 | 283 | 99 | 9 | 3 | 282 | 2 | 241 | 2.65e-64 | 204 |
MS.gene03060.t1 | MTR_2g040050 | 40.000 | 230 | 93 | 7 | 60 | 277 | 10 | 206 | 5.76e-42 | 145 |
MS.gene03060.t1 | MTR_5g083940 | 41.441 | 222 | 76 | 7 | 3 | 224 | 2 | 169 | 1.73e-39 | 140 |
MS.gene03060.t1 | MTR_2g022170 | 52.482 | 141 | 55 | 3 | 3 | 143 | 2 | 130 | 1.77e-39 | 135 |
MS.gene03060.t1 | MTR_7g110360 | 45.143 | 175 | 78 | 3 | 4 | 169 | 38 | 203 | 1.76e-35 | 130 |
MS.gene03060.t1 | MTR_2g037520 | 75.676 | 74 | 14 | 1 | 208 | 277 | 1 | 74 | 8.15e-30 | 111 |
MS.gene03060.t1 | MTR_3g086970 | 42.529 | 174 | 73 | 6 | 43 | 216 | 24 | 170 | 4.36e-28 | 106 |
MS.gene03060.t1 | MTR_2g021190 | 28.674 | 279 | 163 | 10 | 5 | 266 | 21 | 280 | 4.01e-25 | 103 |
MS.gene03060.t1 | MTR_2g021150 | 28.421 | 285 | 168 | 8 | 5 | 271 | 14 | 280 | 5.22e-25 | 102 |
MS.gene03060.t1 | MTR_3g036290 | 31.408 | 277 | 145 | 11 | 5 | 266 | 22 | 268 | 6.70e-25 | 102 |
MS.gene03060.t1 | MTR_3g058440 | 29.195 | 298 | 172 | 13 | 1 | 279 | 31 | 308 | 4.72e-24 | 99.4 |
MS.gene03060.t1 | MTR_3g007330 | 28.763 | 299 | 169 | 13 | 5 | 284 | 48 | 321 | 6.29e-24 | 100 |
MS.gene03060.t1 | MTR_4g061340 | 28.523 | 298 | 181 | 9 | 5 | 284 | 26 | 309 | 9.28e-24 | 99.8 |
MS.gene03060.t1 | MTR_6g065980 | 29.670 | 273 | 151 | 10 | 5 | 266 | 16 | 258 | 1.07e-23 | 99.4 |
MS.gene03060.t1 | MTR_3g010390 | 30.164 | 305 | 171 | 15 | 5 | 285 | 33 | 319 | 1.99e-23 | 99.0 |
MS.gene03060.t1 | MTR_3g014540 | 27.000 | 300 | 180 | 11 | 5 | 284 | 29 | 309 | 2.73e-23 | 98.2 |
MS.gene03060.t1 | MTR_3g006670 | 27.703 | 296 | 184 | 9 | 5 | 284 | 49 | 330 | 4.97e-23 | 97.8 |
MS.gene03060.t1 | MTR_3g009260 | 28.912 | 294 | 173 | 8 | 5 | 284 | 41 | 312 | 7.69e-23 | 97.1 |
MS.gene03060.t1 | MTR_3g007410 | 31.293 | 294 | 169 | 15 | 8 | 284 | 55 | 332 | 9.91e-23 | 97.1 |
MS.gene03060.t1 | MTR_7g013590 | 28.671 | 286 | 175 | 12 | 1 | 272 | 32 | 302 | 1.69e-22 | 96.3 |
MS.gene03060.t1 | MTR_3g009310 | 27.181 | 298 | 180 | 9 | 5 | 284 | 42 | 320 | 2.72e-22 | 95.9 |
MS.gene03060.t1 | MTR_1g097560 | 28.276 | 290 | 155 | 13 | 2 | 272 | 33 | 288 | 3.14e-22 | 95.5 |
MS.gene03060.t1 | MTR_3g014570 | 24.746 | 295 | 193 | 8 | 5 | 284 | 29 | 309 | 3.27e-22 | 95.5 |
MS.gene03060.t1 | MTR_6g053260 | 30.961 | 281 | 156 | 16 | 4 | 266 | 336 | 596 | 3.31e-22 | 96.7 |
MS.gene03060.t1 | MTR_3g007360 | 30.375 | 293 | 173 | 14 | 8 | 284 | 55 | 332 | 3.78e-22 | 95.5 |
MS.gene03060.t1 | MTR_3g007270 | 25.581 | 301 | 193 | 8 | 5 | 284 | 47 | 337 | 4.46e-22 | 95.1 |
MS.gene03060.t1 | MTR_2g078900 | 29.391 | 279 | 154 | 11 | 5 | 266 | 33 | 285 | 6.06e-22 | 94.4 |
MS.gene03060.t1 | MTR_5g011200 | 27.640 | 322 | 160 | 14 | 2 | 285 | 14 | 300 | 6.11e-22 | 94.4 |
MS.gene03060.t1 | MTR_3g009240 | 27.759 | 299 | 173 | 11 | 5 | 284 | 36 | 310 | 6.92e-22 | 94.4 |
MS.gene03060.t1 | MTR_2g029990 | 28.058 | 278 | 164 | 11 | 6 | 266 | 52 | 310 | 7.02e-22 | 94.7 |
MS.gene03060.t1 | MTR_2g021155 | 30.576 | 278 | 163 | 11 | 5 | 269 | 36 | 296 | 1.51e-21 | 94.7 |
MS.gene03060.t1 | MTR_4g116330 | 29.688 | 256 | 148 | 8 | 5 | 249 | 23 | 257 | 1.67e-21 | 93.2 |
MS.gene03060.t1 | MTR_2g046900 | 30.142 | 282 | 158 | 12 | 5 | 266 | 28 | 290 | 1.75e-21 | 93.2 |
MS.gene03060.t1 | MTR_4g130330 | 27.987 | 318 | 181 | 13 | 2 | 280 | 4 | 312 | 1.88e-21 | 93.2 |
MS.gene03060.t1 | MTR_4g031770 | 25.879 | 313 | 168 | 10 | 5 | 285 | 4 | 284 | 3.52e-21 | 92.4 |
MS.gene03060.t1 | MTR_7g407070 | 26.059 | 307 | 184 | 13 | 5 | 285 | 32 | 321 | 4.38e-21 | 92.4 |
MS.gene03060.t1 | MTR_1g088120 | 28.528 | 326 | 165 | 13 | 8 | 284 | 13 | 319 | 7.16e-21 | 92.0 |
MS.gene03060.t1 | MTR_3g436150 | 29.180 | 305 | 171 | 12 | 5 | 285 | 32 | 315 | 1.42e-20 | 90.9 |
MS.gene03060.t1 | MTR_3g013770 | 25.497 | 302 | 186 | 9 | 5 | 284 | 33 | 317 | 2.60e-20 | 90.1 |
MS.gene03060.t1 | MTR_4g023120 | 28.137 | 263 | 150 | 10 | 4 | 251 | 2 | 240 | 2.61e-20 | 89.7 |
MS.gene03060.t1 | MTR_1g056710 | 27.203 | 261 | 159 | 8 | 2 | 249 | 31 | 273 | 4.34e-20 | 89.4 |
MS.gene03060.t1 | MTR_5g046300 | 25.773 | 291 | 179 | 10 | 5 | 285 | 4 | 267 | 4.97e-20 | 89.0 |
MS.gene03060.t1 | MTR_5g046290 | 25.773 | 291 | 179 | 10 | 5 | 285 | 4 | 267 | 4.97e-20 | 89.0 |
MS.gene03060.t1 | MTR_3g024130 | 26.733 | 202 | 128 | 4 | 89 | 284 | 57 | 244 | 5.13e-20 | 88.6 |
MS.gene03060.t1 | MTR_3g007430 | 26.756 | 299 | 177 | 10 | 7 | 284 | 45 | 322 | 5.88e-20 | 89.0 |
MS.gene03060.t1 | MTR_3g006570 | 27.957 | 279 | 168 | 9 | 5 | 269 | 21 | 280 | 8.66e-20 | 88.6 |
MS.gene03060.t1 | MTR_4g102410 | 25.466 | 322 | 181 | 13 | 5 | 279 | 61 | 370 | 1.04e-19 | 89.0 |
MS.gene03060.t1 | MTR_3g009300 | 28.276 | 290 | 153 | 14 | 7 | 284 | 36 | 282 | 1.75e-19 | 87.4 |
MS.gene03060.t1 | MTR_3g024040 | 29.310 | 290 | 163 | 14 | 11 | 285 | 37 | 299 | 2.77e-19 | 87.0 |
MS.gene03060.t1 | MTR_7g017170 | 25.316 | 316 | 184 | 12 | 4 | 280 | 17 | 319 | 3.70e-19 | 87.0 |
MS.gene03060.t1 | MTR_7g017130 | 25.316 | 316 | 184 | 12 | 4 | 280 | 17 | 319 | 3.86e-19 | 86.7 |
MS.gene03060.t1 | MTR_1g097490 | 27.402 | 281 | 177 | 8 | 1 | 272 | 45 | 307 | 4.47e-19 | 86.7 |
MS.gene03060.t1 | MTR_3g034180 | 26.966 | 267 | 155 | 9 | 5 | 249 | 123 | 371 | 6.32e-19 | 86.7 |
MS.gene03060.t1 | MTR_3g011100 | 25.914 | 301 | 188 | 10 | 5 | 285 | 235 | 520 | 7.96e-19 | 86.7 |
MS.gene03060.t1 | MTR_6g053240 | 29.110 | 292 | 152 | 14 | 4 | 266 | 27 | 292 | 9.83e-19 | 85.9 |
MS.gene03060.t1 | MTR_3g464500 | 28.667 | 300 | 165 | 13 | 2 | 271 | 24 | 304 | 1.21e-18 | 85.5 |
MS.gene03060.t1 | MTR_7g070440 | 27.935 | 247 | 164 | 8 | 8 | 248 | 10 | 248 | 1.27e-18 | 85.1 |
MS.gene03060.t1 | MTR_4g019990 | 25.305 | 328 | 182 | 14 | 2 | 285 | 3 | 311 | 1.95e-18 | 84.7 |
MS.gene03060.t1 | MTR_4g023070 | 27.090 | 299 | 174 | 13 | 4 | 285 | 2 | 273 | 2.09e-18 | 84.3 |
MS.gene03060.t1 | MTR_3g034160 | 27.239 | 268 | 153 | 10 | 5 | 249 | 9 | 257 | 2.36e-18 | 84.3 |
MS.gene03060.t1 | MTR_4g116330 | 29.694 | 229 | 131 | 7 | 5 | 222 | 23 | 232 | 2.43e-18 | 84.0 |
MS.gene03060.t1 | MTR_8g013010 | 29.555 | 247 | 143 | 9 | 5 | 238 | 54 | 282 | 2.70e-18 | 83.6 |
MS.gene03060.t1 | MTR_4g030830 | 25.776 | 322 | 179 | 13 | 5 | 285 | 9 | 311 | 2.82e-18 | 84.3 |
MS.gene03060.t1 | MTR_5g057710 | 26.948 | 308 | 168 | 15 | 5 | 284 | 46 | 324 | 3.40e-18 | 84.0 |
MS.gene03060.t1 | MTR_8g101580 | 28.986 | 276 | 164 | 9 | 4 | 266 | 44 | 300 | 3.64e-18 | 84.0 |
MS.gene03060.t1 | MTR_2g034700 | 25.424 | 295 | 189 | 9 | 5 | 280 | 14 | 296 | 6.11e-18 | 83.2 |
MS.gene03060.t1 | MTR_5g096630 | 24.922 | 321 | 185 | 14 | 4 | 279 | 17 | 326 | 6.16e-18 | 83.6 |
MS.gene03060.t1 | MTR_3g011650 | 29.646 | 226 | 129 | 6 | 7 | 223 | 81 | 285 | 6.39e-18 | 82.0 |
MS.gene03060.t1 | MTR_2g046920 | 27.402 | 281 | 159 | 9 | 5 | 266 | 24 | 278 | 6.64e-18 | 83.2 |
MS.gene03060.t1 | MTR_3g464470 | 28.146 | 302 | 161 | 13 | 2 | 271 | 4 | 281 | 7.40e-18 | 83.2 |
MS.gene03060.t1 | MTR_2g046830 | 25.979 | 281 | 157 | 10 | 8 | 266 | 28 | 279 | 8.03e-18 | 83.2 |
MS.gene03060.t1 | MTR_4g024890 | 28.378 | 296 | 167 | 14 | 3 | 271 | 8 | 285 | 1.05e-17 | 82.8 |
MS.gene03060.t1 | MTR_1g097330 | 28.627 | 255 | 150 | 9 | 5 | 250 | 16 | 247 | 1.06e-17 | 82.8 |
MS.gene03060.t1 | MTR_7g066850 | 25.545 | 321 | 171 | 12 | 5 | 284 | 23 | 316 | 1.10e-17 | 82.8 |
MS.gene03060.t1 | MTR_4g055060 | 26.148 | 283 | 160 | 7 | 5 | 261 | 30 | 289 | 1.60e-17 | 82.0 |
MS.gene03060.t1 | MTR_3g058480 | 28.413 | 271 | 153 | 12 | 4 | 254 | 38 | 287 | 1.69e-17 | 81.6 |
MS.gene03060.t1 | MTR_7g007300 | 28.114 | 281 | 148 | 12 | 5 | 266 | 103 | 348 | 2.10e-17 | 82.0 |
MS.gene03060.t1 | MTR_1g050542 | 28.044 | 271 | 163 | 9 | 5 | 266 | 58 | 305 | 2.15e-17 | 82.0 |
MS.gene03060.t1 | MTR_3g013740 | 25.850 | 294 | 175 | 12 | 1 | 266 | 40 | 318 | 2.18e-17 | 82.0 |
MS.gene03060.t1 | MTR_1g055070 | 25.912 | 274 | 162 | 10 | 2 | 249 | 46 | 304 | 2.36e-17 | 81.6 |
MS.gene03060.t1 | MTR_4g023080 | 26.459 | 257 | 150 | 8 | 5 | 250 | 9 | 237 | 3.07e-17 | 80.9 |
MS.gene03060.t1 | MTR_3g058470 | 28.708 | 209 | 120 | 5 | 4 | 195 | 36 | 232 | 3.12e-17 | 81.3 |
MS.gene03060.t1 | MTR_4g030090 | 25.705 | 319 | 189 | 13 | 1 | 285 | 10 | 314 | 4.25e-17 | 80.9 |
MS.gene03060.t1 | MTR_0044s0300 | 25.091 | 275 | 172 | 9 | 5 | 266 | 38 | 291 | 5.56e-17 | 80.5 |
MS.gene03060.t1 | MTR_7g077070 | 26.582 | 316 | 181 | 12 | 5 | 278 | 16 | 322 | 1.35e-16 | 79.7 |
MS.gene03060.t1 | MTR_8g467140 | 24.055 | 291 | 171 | 10 | 5 | 274 | 32 | 293 | 1.53e-16 | 79.0 |
MS.gene03060.t1 | MTR_5g057020 | 27.113 | 284 | 145 | 11 | 5 | 265 | 46 | 290 | 1.62e-16 | 79.0 |
MS.gene03060.t1 | MTR_7g062100 | 27.302 | 315 | 181 | 14 | 1 | 284 | 20 | 317 | 1.68e-16 | 79.3 |
MS.gene03060.t1 | MTR_3g010450 | 28.261 | 276 | 158 | 13 | 9 | 275 | 1 | 245 | 1.80e-16 | 77.4 |
MS.gene03060.t1 | MTR_4g014370 | 26.384 | 307 | 178 | 14 | 5 | 266 | 11 | 314 | 1.86e-16 | 79.3 |
MS.gene03060.t1 | MTR_8g066440 | 27.329 | 322 | 179 | 15 | 5 | 284 | 23 | 331 | 1.95e-16 | 79.0 |
MS.gene03060.t1 | MTR_1g054575 | 27.899 | 276 | 160 | 10 | 5 | 266 | 52 | 302 | 2.10e-16 | 79.3 |
MS.gene03060.t1 | MTR_3g011060 | 24.490 | 294 | 168 | 9 | 5 | 266 | 28 | 299 | 2.25e-16 | 79.0 |
MS.gene03060.t1 | MTR_0128s0010 | 24.839 | 310 | 190 | 8 | 5 | 284 | 21 | 317 | 2.36e-16 | 79.0 |
MS.gene03060.t1 | MTR_3g024110 | 26.545 | 275 | 157 | 12 | 5 | 264 | 101 | 345 | 2.70e-16 | 79.0 |
MS.gene03060.t1 | MTR_3g009250 | 29.956 | 227 | 128 | 7 | 5 | 222 | 41 | 245 | 3.15e-16 | 76.6 |
MS.gene03060.t1 | MTR_0760s0010 | 29.856 | 278 | 139 | 14 | 10 | 266 | 52 | 294 | 3.51e-16 | 78.2 |
MS.gene03060.t1 | MTR_7g016930 | 27.208 | 283 | 173 | 10 | 5 | 270 | 16 | 282 | 3.59e-16 | 77.8 |
MS.gene03060.t1 | MTR_2g047832 | 25.914 | 301 | 158 | 11 | 5 | 266 | 29 | 303 | 3.85e-16 | 78.2 |
MS.gene03060.t1 | MTR_2g078850 | 25.993 | 277 | 171 | 11 | 7 | 269 | 32 | 288 | 6.03e-16 | 77.4 |
MS.gene03060.t1 | MTR_4g028510 | 25.461 | 271 | 165 | 10 | 8 | 248 | 19 | 282 | 6.44e-16 | 77.8 |
MS.gene03060.t1 | MTR_7g070830 | 27.157 | 313 | 141 | 15 | 1 | 251 | 17 | 304 | 7.27e-16 | 77.4 |
MS.gene03060.t1 | MTR_4g107820 | 26.199 | 271 | 155 | 9 | 1 | 254 | 32 | 274 | 8.03e-16 | 77.0 |
MS.gene03060.t1 | MTR_4g107780 | 26.199 | 271 | 155 | 9 | 1 | 254 | 32 | 274 | 8.03e-16 | 77.0 |
MS.gene03060.t1 | MTR_4g107780 | 26.199 | 271 | 155 | 9 | 1 | 254 | 32 | 274 | 8.11e-16 | 77.4 |
MS.gene03060.t1 | MTR_5g007610 | 25.914 | 301 | 193 | 10 | 5 | 285 | 41 | 331 | 8.48e-16 | 77.0 |
MS.gene03060.t1 | MTR_4g107820 | 26.199 | 271 | 155 | 9 | 1 | 254 | 32 | 274 | 8.67e-16 | 77.0 |
MS.gene03060.t1 | MTR_8g062660 | 25.347 | 288 | 167 | 12 | 5 | 266 | 22 | 287 | 1.01e-15 | 77.4 |
MS.gene03060.t1 | MTR_4g011660 | 24.260 | 338 | 184 | 12 | 2 | 284 | 16 | 336 | 1.04e-15 | 77.0 |
MS.gene03060.t1 | MTR_8g064890 | 26.821 | 302 | 182 | 9 | 8 | 280 | 19 | 310 | 1.08e-15 | 76.6 |
MS.gene03060.t1 | MTR_3g030310 | 23.776 | 286 | 180 | 9 | 5 | 271 | 21 | 287 | 1.19e-15 | 76.6 |
MS.gene03060.t1 | MTR_3g006530 | 26.316 | 266 | 153 | 10 | 5 | 249 | 40 | 283 | 1.30e-15 | 76.6 |
MS.gene03060.t1 | MTR_5g096710 | 28.479 | 309 | 179 | 17 | 5 | 284 | 23 | 318 | 1.41e-15 | 76.6 |
MS.gene03060.t1 | MTR_2g437190 | 42.361 | 144 | 55 | 7 | 6 | 144 | 23 | 143 | 2.09e-15 | 72.8 |
MS.gene03060.t1 | MTR_4g094365 | 29.762 | 252 | 151 | 8 | 5 | 248 | 8 | 241 | 2.16e-15 | 75.9 |
MS.gene03060.t1 | MTR_2g055970 | 25.175 | 286 | 174 | 11 | 5 | 274 | 211 | 472 | 2.25e-15 | 76.3 |
MS.gene03060.t1 | MTR_7g017040 | 29.752 | 242 | 126 | 12 | 5 | 218 | 16 | 241 | 2.55e-15 | 75.9 |
MS.gene03060.t1 | MTR_3g009290 | 26.908 | 249 | 151 | 8 | 5 | 245 | 35 | 260 | 2.67e-15 | 74.3 |
MS.gene03060.t1 | MTR_3g103020 | 27.715 | 267 | 152 | 9 | 5 | 254 | 20 | 262 | 3.46e-15 | 75.1 |
MS.gene03060.t1 | MTR_5g057790 | 28.070 | 285 | 156 | 12 | 5 | 265 | 46 | 305 | 3.58e-15 | 75.5 |
MS.gene03060.t1 | MTR_1g094210 | 26.855 | 283 | 153 | 11 | 5 | 266 | 57 | 306 | 3.61e-15 | 75.5 |
MS.gene03060.t1 | MTR_5g057690 | 26.316 | 285 | 151 | 11 | 5 | 265 | 46 | 295 | 3.84e-15 | 75.1 |
MS.gene03060.t1 | MTR_2g066200 | 26.282 | 312 | 181 | 14 | 5 | 280 | 12 | 310 | 4.71e-15 | 75.1 |
MS.gene03060.t1 | MTR_3g034130 | 26.592 | 267 | 154 | 10 | 5 | 248 | 9 | 256 | 5.25e-15 | 74.7 |
MS.gene03060.t1 | MTR_1g094210 | 26.855 | 283 | 153 | 11 | 5 | 266 | 57 | 306 | 5.53e-15 | 74.7 |
MS.gene03060.t1 | MTR_3g036430 | 25.287 | 261 | 157 | 9 | 5 | 264 | 20 | 243 | 5.71e-15 | 74.3 |
MS.gene03060.t1 | MTR_3g010430 | 26.804 | 291 | 158 | 10 | 5 | 269 | 36 | 297 | 6.60e-15 | 74.7 |
MS.gene03060.t1 | MTR_5g070080 | 28.125 | 288 | 130 | 11 | 5 | 248 | 10 | 264 | 7.89e-15 | 74.3 |
MS.gene03060.t1 | MTR_0054s0100 | 25.325 | 308 | 188 | 10 | 13 | 280 | 25 | 330 | 8.53e-15 | 74.3 |
MS.gene03060.t1 | MTR_8g054320 | 32.022 | 178 | 81 | 7 | 116 | 285 | 76 | 221 | 8.70e-15 | 73.6 |
MS.gene03060.t1 | MTR_2g065860 | 26.246 | 301 | 170 | 14 | 5 | 270 | 12 | 295 | 8.95e-15 | 73.9 |
MS.gene03060.t1 | MTR_7g066840 | 24.691 | 324 | 174 | 13 | 5 | 284 | 23 | 320 | 9.92e-15 | 73.9 |
MS.gene03060.t1 | MTR_7g078900 | 25.649 | 308 | 172 | 13 | 8 | 271 | 15 | 309 | 1.04e-14 | 73.9 |
MS.gene03060.t1 | MTR_4g021785 | 26.744 | 258 | 149 | 8 | 5 | 250 | 9 | 238 | 1.08e-14 | 73.6 |
MS.gene03060.t1 | MTR_4g117850 | 27.481 | 262 | 151 | 12 | 5 | 251 | 23 | 260 | 1.10e-14 | 73.9 |
MS.gene03060.t1 | MTR_6g080680 | 27.215 | 316 | 181 | 18 | 1 | 280 | 15 | 317 | 1.18e-14 | 73.9 |
MS.gene03060.t1 | MTR_7g055870 | 27.103 | 321 | 161 | 14 | 8 | 271 | 16 | 320 | 1.64e-14 | 73.6 |
MS.gene03060.t1 | MTR_7g061060 | 26.780 | 295 | 171 | 9 | 5 | 271 | 13 | 290 | 1.67e-14 | 73.6 |
MS.gene03060.t1 | MTR_4g023090 | 24.806 | 258 | 163 | 7 | 5 | 251 | 16 | 253 | 1.70e-14 | 73.2 |
MS.gene03060.t1 | MTR_4g023440 | 28.458 | 253 | 142 | 11 | 5 | 242 | 18 | 246 | 1.76e-14 | 72.8 |
MS.gene03060.t1 | MTR_7g078840 | 27.812 | 320 | 168 | 14 | 5 | 271 | 10 | 319 | 2.42e-14 | 73.2 |
MS.gene03060.t1 | MTR_7g070880 | 26.667 | 315 | 144 | 15 | 1 | 253 | 17 | 306 | 2.76e-14 | 72.8 |
MS.gene03060.t1 | MTR_4g013185 | 26.269 | 335 | 173 | 15 | 8 | 284 | 13 | 331 | 2.85e-14 | 72.8 |
MS.gene03060.t1 | MTR_6g048120 | 26.460 | 291 | 161 | 16 | 5 | 266 | 36 | 302 | 3.15e-14 | 72.8 |
MS.gene03060.t1 | MTR_7g055987 | 26.804 | 291 | 159 | 13 | 8 | 271 | 23 | 286 | 3.16e-14 | 72.4 |
MS.gene03060.t1 | MTR_3g030240 | 26.449 | 276 | 154 | 12 | 5 | 266 | 40 | 280 | 3.42e-14 | 72.4 |
MS.gene03060.t1 | MTR_5g097330 | 25.879 | 313 | 175 | 15 | 13 | 280 | 24 | 324 | 3.80e-14 | 72.4 |
MS.gene03060.t1 | MTR_6g017280 | 22.896 | 297 | 186 | 11 | 5 | 274 | 9 | 289 | 5.36e-14 | 72.0 |
MS.gene03060.t1 | MTR_6g086825 | 25.846 | 325 | 180 | 14 | 5 | 280 | 70 | 382 | 5.61e-14 | 72.0 |
MS.gene03060.t1 | MTR_7g061050 | 27.336 | 289 | 174 | 9 | 5 | 280 | 13 | 278 | 5.74e-14 | 71.6 |
MS.gene03060.t1 | MTR_8g012090 | 26.531 | 294 | 160 | 14 | 13 | 280 | 24 | 287 | 5.95e-14 | 71.2 |
MS.gene03060.t1 | MTR_4g109280 | 27.273 | 253 | 155 | 10 | 5 | 249 | 8 | 239 | 8.14e-14 | 71.2 |
MS.gene03060.t1 | MTR_7g056760 | 26.433 | 314 | 188 | 16 | 5 | 284 | 23 | 327 | 8.65e-14 | 71.2 |
MS.gene03060.t1 | MTR_7g056290 | 25.559 | 313 | 150 | 13 | 8 | 267 | 25 | 307 | 9.56e-14 | 71.2 |
MS.gene03060.t1 | MTR_4g023130 | 26.104 | 249 | 120 | 8 | 5 | 250 | 9 | 196 | 1.03e-13 | 70.5 |
MS.gene03060.t1 | MTR_8g039500 | 26.159 | 302 | 183 | 11 | 5 | 280 | 12 | 299 | 1.15e-13 | 70.5 |
MS.gene03060.t1 | MTR_1g054725 | 24.262 | 305 | 188 | 13 | 5 | 285 | 20 | 305 | 1.20e-13 | 70.9 |
MS.gene03060.t1 | MTR_7g066010 | 26.299 | 308 | 181 | 11 | 5 | 280 | 21 | 314 | 1.24e-13 | 70.5 |
MS.gene03060.t1 | MTR_6g021880 | 25.188 | 266 | 167 | 9 | 16 | 263 | 31 | 282 | 1.30e-13 | 70.5 |
MS.gene03060.t1 | MTR_4g117780 | 27.935 | 247 | 142 | 13 | 4 | 238 | 10 | 232 | 1.30e-13 | 70.5 |
MS.gene03060.t1 | MTR_0054s0090 | 26.592 | 267 | 164 | 9 | 13 | 250 | 25 | 288 | 1.40e-13 | 70.9 |
MS.gene03060.t1 | MTR_2g047892 | 25.000 | 292 | 170 | 11 | 5 | 265 | 22 | 295 | 1.47e-13 | 70.5 |
MS.gene03060.t1 | MTR_2g025995 | 73.469 | 49 | 12 | 1 | 1 | 48 | 1 | 49 | 2.29e-13 | 68.6 |
MS.gene03060.t1 | MTR_4g116340 | 29.279 | 222 | 126 | 11 | 5 | 219 | 36 | 233 | 2.67e-13 | 68.6 |
MS.gene03060.t1 | MTR_1g055135 | 26.384 | 307 | 160 | 11 | 5 | 277 | 13 | 287 | 3.35e-13 | 69.3 |
MS.gene03060.t1 | MTR_2g021252 | 25.000 | 280 | 154 | 12 | 7 | 266 | 49 | 292 | 3.60e-13 | 69.3 |
MS.gene03060.t1 | MTR_2g022000 | 24.290 | 317 | 168 | 13 | 5 | 266 | 16 | 315 | 4.58e-13 | 69.3 |
MS.gene03060.t1 | MTR_7g022600 | 23.313 | 326 | 190 | 13 | 8 | 284 | 26 | 340 | 4.62e-13 | 69.3 |
MS.gene03060.t1 | MTR_7g055930 | 25.545 | 321 | 166 | 14 | 8 | 271 | 16 | 320 | 5.35e-13 | 68.9 |
MS.gene03060.t1 | MTR_6g027910 | 24.653 | 288 | 181 | 14 | 5 | 266 | 9 | 286 | 5.82e-13 | 68.6 |
MS.gene03060.t1 | MTR_7g056820 | 26.087 | 299 | 165 | 13 | 5 | 270 | 7 | 282 | 6.16e-13 | 68.6 |
MS.gene03060.t1 | MTR_5g043605 | 25.170 | 294 | 155 | 13 | 1 | 281 | 21 | 262 | 6.59e-13 | 68.6 |
MS.gene03060.t1 | MTR_4g129190 | 25.076 | 327 | 178 | 13 | 2 | 284 | 3 | 306 | 6.95e-13 | 68.6 |
MS.gene03060.t1 | MTR_7g077970 | 26.748 | 329 | 177 | 16 | 5 | 284 | 7 | 320 | 8.78e-13 | 68.2 |
MS.gene03060.t1 | MTR_0464s0020 | 23.693 | 287 | 155 | 10 | 8 | 249 | 26 | 293 | 8.91e-13 | 68.2 |
MS.gene03060.t1 | MTR_2g021770 | 26.370 | 292 | 150 | 15 | 3 | 248 | 14 | 286 | 9.55e-13 | 68.2 |
MS.gene03060.t1 | MTR_7g028660 | 26.752 | 314 | 182 | 14 | 5 | 285 | 11 | 309 | 1.40e-12 | 67.8 |
MS.gene03060.t1 | MTR_5g069760 | 26.875 | 320 | 163 | 16 | 5 | 284 | 6 | 294 | 1.58e-12 | 67.4 |
MS.gene03060.t1 | MTR_3g030350 | 25.806 | 279 | 169 | 12 | 5 | 269 | 35 | 289 | 1.73e-12 | 67.4 |
MS.gene03060.t1 | MTR_7g060940 | 26.974 | 304 | 151 | 11 | 5 | 267 | 22 | 295 | 1.89e-12 | 67.4 |
MS.gene03060.t1 | MTR_4g109270 | 25.574 | 305 | 176 | 14 | 3 | 283 | 6 | 283 | 2.25e-12 | 67.0 |
MS.gene03060.t1 | MTR_4g030110 | 25.874 | 286 | 152 | 12 | 5 | 251 | 30 | 294 | 2.27e-12 | 67.0 |
MS.gene03060.t1 | MTR_5g022420 | 24.912 | 285 | 159 | 13 | 5 | 270 | 27 | 275 | 2.69e-12 | 66.6 |
MS.gene03060.t1 | MTR_4g024870 | 26.545 | 275 | 157 | 11 | 6 | 251 | 45 | 303 | 3.05e-12 | 66.6 |
MS.gene03060.t1 | MTR_0649s0020 | 26.756 | 299 | 160 | 14 | 5 | 266 | 11 | 287 | 3.09e-12 | 66.6 |
MS.gene03060.t1 | MTR_3g437520 | 24.483 | 290 | 152 | 10 | 8 | 249 | 26 | 296 | 3.19e-12 | 66.6 |
MS.gene03060.t1 | MTR_2g065840 | 24.028 | 283 | 190 | 9 | 9 | 270 | 16 | 294 | 3.67e-12 | 66.2 |
MS.gene03060.t1 | MTR_7g066030 | 26.568 | 271 | 164 | 12 | 5 | 248 | 21 | 283 | 3.67e-12 | 66.6 |
MS.gene03060.t1 | MTR_4g117550 | 24.172 | 302 | 164 | 13 | 5 | 268 | 17 | 291 | 4.17e-12 | 66.2 |
MS.gene03060.t1 | MTR_1g007430 | 23.944 | 284 | 159 | 10 | 15 | 266 | 6 | 264 | 4.50e-12 | 65.9 |
MS.gene03060.t1 | MTR_3g010920 | 25.725 | 276 | 154 | 11 | 5 | 266 | 44 | 282 | 4.82e-12 | 65.9 |
MS.gene03060.t1 | MTR_4g121580 | 27.686 | 242 | 124 | 10 | 5 | 218 | 11 | 229 | 4.99e-12 | 65.9 |
MS.gene03060.t1 | MTR_3g030330 | 25.540 | 278 | 162 | 11 | 5 | 266 | 20 | 268 | 6.01e-12 | 65.9 |
MS.gene03060.t1 | MTR_5g046260 | 23.368 | 291 | 156 | 11 | 5 | 285 | 4 | 237 | 6.61e-12 | 65.1 |
MS.gene03060.t1 | MTR_7g055977 | 26.646 | 319 | 169 | 15 | 5 | 284 | 7 | 299 | 6.68e-12 | 65.5 |
MS.gene03060.t1 | MTR_2g021950 | 24.723 | 271 | 153 | 13 | 13 | 248 | 24 | 278 | 8.22e-12 | 65.5 |
MS.gene03060.t1 | MTR_4g031020 | 23.410 | 346 | 188 | 13 | 5 | 285 | 15 | 348 | 8.99e-12 | 65.5 |
MS.gene03060.t1 | MTR_4g033495 | 25.157 | 318 | 186 | 13 | 3 | 284 | 25 | 326 | 1.07e-11 | 65.1 |
MS.gene03060.t1 | MTR_4g122850 | 28.235 | 255 | 142 | 14 | 16 | 250 | 12 | 245 | 1.07e-11 | 65.1 |
MS.gene03060.t1 | MTR_4g030760 | 26.710 | 307 | 162 | 13 | 8 | 285 | 76 | 348 | 1.11e-11 | 65.1 |
MS.gene03060.t1 | MTR_4g117770 | 26.446 | 242 | 144 | 9 | 8 | 238 | 14 | 232 | 1.21e-11 | 64.7 |
MS.gene03060.t1 | MTR_4g117810 | 26.446 | 242 | 144 | 9 | 8 | 238 | 14 | 232 | 1.21e-11 | 64.7 |
MS.gene03060.t1 | MTR_1g007410 | 23.292 | 322 | 185 | 14 | 5 | 280 | 22 | 327 | 1.55e-11 | 64.7 |
MS.gene03060.t1 | MTR_2g021210 | 28.472 | 288 | 153 | 13 | 5 | 272 | 84 | 338 | 1.74e-11 | 64.3 |
MS.gene03060.t1 | MTR_8g046310 | 26.490 | 302 | 172 | 14 | 8 | 280 | 19 | 299 | 2.11e-11 | 63.9 |
MS.gene03060.t1 | MTR_6g461660 | 23.962 | 313 | 187 | 12 | 8 | 280 | 22 | 323 | 2.48e-11 | 63.9 |
MS.gene03060.t1 | MTR_6g004210 | 24.068 | 295 | 172 | 10 | 16 | 272 | 36 | 316 | 2.80e-11 | 63.9 |
MS.gene03060.t1 | MTR_5g097210 | 25.379 | 264 | 155 | 9 | 5 | 251 | 9 | 247 | 3.01e-11 | 63.5 |
MS.gene03060.t1 | MTR_7g066000 | 25.676 | 296 | 171 | 13 | 5 | 267 | 25 | 304 | 3.26e-11 | 63.5 |
MS.gene03060.t1 | MTR_3g036335 | 25.714 | 280 | 168 | 11 | 5 | 266 | 41 | 298 | 3.56e-11 | 63.5 |
MS.gene03060.t1 | MTR_5g092850 | 24.643 | 280 | 165 | 11 | 8 | 251 | 19 | 288 | 3.73e-11 | 63.5 |
MS.gene03060.t1 | MTR_6g048140 | 26.224 | 286 | 158 | 13 | 5 | 264 | 39 | 297 | 3.75e-11 | 63.5 |
MS.gene03060.t1 | MTR_7g052150 | 29.279 | 222 | 106 | 11 | 5 | 204 | 22 | 214 | 4.39e-11 | 63.2 |
MS.gene03060.t1 | MTR_5g069930 | 27.174 | 276 | 147 | 14 | 5 | 251 | 6 | 256 | 4.46e-11 | 63.2 |
MS.gene03060.t1 | MTR_7g056710 | 26.101 | 318 | 167 | 14 | 5 | 284 | 18 | 305 | 4.51e-11 | 63.2 |
MS.gene03060.t1 | MTR_8g063350 | 23.944 | 284 | 168 | 11 | 8 | 279 | 17 | 264 | 5.25e-11 | 62.8 |
MS.gene03060.t1 | MTR_4g023380 | 24.806 | 258 | 148 | 8 | 5 | 251 | 16 | 238 | 5.33e-11 | 62.8 |
MS.gene03060.t1 | MTR_3g023930 | 24.164 | 269 | 161 | 9 | 5 | 264 | 34 | 268 | 5.71e-11 | 62.8 |
MS.gene03060.t1 | MTR_2g010950 | 26.006 | 323 | 181 | 19 | 3 | 284 | 18 | 323 | 6.36e-11 | 62.8 |
MS.gene03060.t1 | MTR_7g056260 | 23.794 | 311 | 155 | 13 | 8 | 271 | 17 | 292 | 6.74e-11 | 62.4 |
MS.gene03060.t1 | MTR_0831s0010 | 26.408 | 284 | 145 | 13 | 5 | 253 | 50 | 304 | 7.06e-11 | 62.8 |
MS.gene03060.t1 | MTR_5g094350 | 24.242 | 264 | 173 | 7 | 8 | 250 | 16 | 273 | 7.22e-11 | 62.0 |
MS.gene03060.t1 | MTR_5g096910 | 24.922 | 321 | 178 | 15 | 2 | 280 | 14 | 313 | 7.31e-11 | 62.4 |
MS.gene03060.t1 | MTR_1g071010 | 22.713 | 317 | 189 | 13 | 5 | 284 | 15 | 312 | 8.19e-11 | 62.4 |
MS.gene03060.t1 | MTR_6g090180 | 24.839 | 310 | 172 | 14 | 5 | 266 | 47 | 343 | 9.11e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03060.t1 | AT4G12560 | 32.673 | 303 | 157 | 11 | 3 | 277 | 2 | 285 | 1.18e-36 | 135 |
MS.gene03060.t1 | AT4G12560 | 32.673 | 303 | 157 | 11 | 3 | 277 | 2 | 285 | 1.18e-36 | 135 |
MS.gene03060.t1 | AT4G12560 | 32.673 | 303 | 157 | 11 | 3 | 277 | 2 | 285 | 1.18e-36 | 135 |
MS.gene03060.t1 | AT4G22390 | 28.094 | 299 | 172 | 12 | 3 | 277 | 2 | 281 | 6.26e-22 | 94.7 |
MS.gene03060.t1 | AT4G22390 | 28.094 | 299 | 172 | 12 | 3 | 277 | 2 | 281 | 6.52e-22 | 94.7 |
MS.gene03060.t1 | AT3G07870 | 26.910 | 301 | 174 | 12 | 5 | 277 | 28 | 310 | 1.19e-15 | 77.0 |
MS.gene03060.t1 | AT4G04690 | 23.938 | 259 | 174 | 8 | 5 | 262 | 11 | 247 | 3.95e-15 | 75.1 |
MS.gene03060.t1 | AT3G16210 | 26.357 | 258 | 144 | 12 | 1 | 248 | 1 | 222 | 2.12e-13 | 70.1 |
MS.gene03060.t1 | AT3G10430 | 29.084 | 251 | 150 | 11 | 1 | 245 | 1 | 229 | 2.28e-13 | 70.1 |
Find 79 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTCCTAAAATTGATGTTT+TGG | 0.185892 | 2.1:-60870967 | MS.gene03060:CDS |
GAATTTGTGGGTATCAATTA+AGG | 0.230825 | 2.1:+60871679 | None:intergenic |
TGAAATTCATATTGCTGTTT+TGG | 0.244535 | 2.1:-60871021 | MS.gene03060:CDS |
CTGACATGTGGATCATAATA+AGG | 0.252870 | 2.1:+60871254 | None:intergenic |
GGAGGATGAGGTTGAAATTT+CGG | 0.286628 | 2.1:+60871633 | None:intergenic |
GAGGATGAGGTTGAAATTTC+GGG | 0.288904 | 2.1:+60871634 | None:intergenic |
ATCCGATGTTTATGCGTGTT+AGG | 0.333054 | 2.1:+60871419 | None:intergenic |
AAATTCTCTTCACTGGATAA+TGG | 0.337866 | 2.1:-60871141 | MS.gene03060:CDS |
GTGATAGGAAGAGGTAGAAA+AGG | 0.340274 | 2.1:+60871392 | None:intergenic |
GTGGAATCATCGATTTGGTT+AGG | 0.351784 | 2.1:+60871573 | None:intergenic |
GTTGTAGAATGTAATTTCAT+TGG | 0.351960 | 2.1:+60871442 | None:intergenic |
TACAAACTCCTCAGAATCTC+TGG | 0.358214 | 2.1:-60871296 | MS.gene03060:CDS |
AACTGCTGTTTATGCGTTCA+CGG | 0.361065 | 2.1:-60871347 | MS.gene03060:CDS |
TGTTTATGCGTTCACGGCTT+TGG | 0.364434 | 2.1:-60871341 | MS.gene03060:CDS |
CCTCAGAATCTCTGGGTTAA+CGG | 0.378899 | 2.1:-60871288 | MS.gene03060:CDS |
TTGTAGAATGTAATTTCATT+GGG | 0.380317 | 2.1:+60871443 | None:intergenic |
AGTTTGTAATCGGCAGATAA+TGG | 0.382925 | 2.1:+60871311 | None:intergenic |
AAGGATGCGCGAAAGCGATT+TGG | 0.394178 | 2.1:+60871471 | None:intergenic |
ATTGAGTGGAATCATCGATT+TGG | 0.397977 | 2.1:+60871568 | None:intergenic |
TGGTAAGCGGGAGAAGATTT+CGG | 0.401932 | 2.1:+60871748 | None:intergenic |
AGCCCCAACATCACTCTTAT+CGG | 0.405815 | 2.1:-60871527 | MS.gene03060:CDS |
TAGAGAGCGTAAGGCATACT+AGG | 0.422738 | 2.1:+60871194 | None:intergenic |
GATTGAGAACAAGGAGTGAT+AGG | 0.428990 | 2.1:+60871377 | None:intergenic |
TTGTTGAAAATTCTCTTCAC+TGG | 0.430675 | 2.1:-60871148 | MS.gene03060:CDS |
GATTCTGAGGAGTTTGTAAT+CGG | 0.432252 | 2.1:+60871301 | None:intergenic |
ATTTCACCTCCTACTTCATC+AGG | 0.432316 | 2.1:+60871038 | None:intergenic |
TCCACTCAATCATCCTTTCA+AGG | 0.436444 | 2.1:-60871555 | MS.gene03060:CDS |
TCCGATGTTTATGCGTGTTA+GGG | 0.443177 | 2.1:+60871420 | None:intergenic |
CACTGAAAATCTCAAGTGTT+AGG | 0.450765 | 2.1:+60871072 | None:intergenic |
GAACAAGGAGTGATAGGAAG+AGG | 0.453984 | 2.1:+60871383 | None:intergenic |
ACTTCGAGGTTGATCGGAAT+CGG | 0.454210 | 2.1:+60871711 | None:intergenic |
GAACCGATAAGAGTGATGTT+GGG | 0.454749 | 2.1:+60871524 | None:intergenic |
TGATAGGAAGAGGTAGAAAA+GGG | 0.455212 | 2.1:+60871393 | None:intergenic |
CTCTACTATGCTCAAACCAT+GGG | 0.461336 | 2.1:-60871176 | MS.gene03060:CDS |
AGCGATTTGGCCATTAGAAA+AGG | 0.471360 | 2.1:+60871484 | None:intergenic |
GGTGAAGATTGATGAATTTG+TGG | 0.476243 | 2.1:+60871666 | None:intergenic |
TGGAATCATCGATTTGGTTA+GGG | 0.478327 | 2.1:+60871574 | None:intergenic |
TCATCGATTTGGTTAGGGTA+GGG | 0.495127 | 2.1:+60871579 | None:intergenic |
TGAACCGATAAGAGTGATGT+TGG | 0.495326 | 2.1:+60871523 | None:intergenic |
GAATTGACTTCGAGGTTGAT+CGG | 0.497631 | 2.1:+60871705 | None:intergenic |
TGACATGTGGATCATAATAA+GGG | 0.502802 | 2.1:+60871255 | None:intergenic |
GTGAAGATTGATGAATTTGT+GGG | 0.508021 | 2.1:+60871667 | None:intergenic |
TCTCTACTATGCTCAAACCA+TGG | 0.524201 | 2.1:-60871177 | MS.gene03060:CDS |
CAGTGTTATAGCGGAGGATG+AGG | 0.525123 | 2.1:+60871621 | None:intergenic |
GAGTGATTGTACTGGTAAGC+GGG | 0.539612 | 2.1:+60871736 | None:intergenic |
TAAGGTTCGAATTGACTTCG+AGG | 0.540443 | 2.1:+60871697 | None:intergenic |
TGAGCATAGTAGAGAGCGTA+AGG | 0.540937 | 2.1:+60871185 | None:intergenic |
ACTCTTATCGGTTCATGTAA+CGG | 0.552247 | 2.1:-60871515 | MS.gene03060:CDS |
CCGTTAACCCAGAGATTCTG+AGG | 0.556465 | 2.1:+60871288 | None:intergenic |
CCTCCTACTTCATCAGGAAG+AGG | 0.563141 | 2.1:+60871044 | None:intergenic |
TTGGGGCTGTTACCCTTGAA+AGG | 0.568156 | 2.1:+60871542 | None:intergenic |
CCACTCAATCATCCTTTCAA+GGG | 0.570124 | 2.1:-60871554 | MS.gene03060:CDS |
GTTCCTCTTCCTGATGAAGT+AGG | 0.573216 | 2.1:-60871047 | MS.gene03060:CDS |
CCCTTGAAAGGATGATTGAG+TGG | 0.575591 | 2.1:+60871554 | None:intergenic |
AGCGGAAGATCAGCAGCCAT+CGG | 0.590835 | 2.1:+60871782 | None:intergenic |
ACAAACTCCTCAGAATCTCT+GGG | 0.596070 | 2.1:-60871295 | MS.gene03060:CDS |
TTCATGTCAGATTGAGAACA+AGG | 0.597981 | 2.1:+60871368 | None:intergenic |
TCAGCTTGAAAACAAACTCG+TGG | 0.600644 | 2.1:-60871226 | MS.gene03060:CDS |
TGTAGAATGTAATTTCATTG+GGG | 0.606865 | 2.1:+60871444 | None:intergenic |
TTAGGGTAGGGAAATCGAGT+TGG | 0.606868 | 2.1:+60871591 | None:intergenic |
AATCGGAGGAGTGATTGTAC+TGG | 0.607476 | 2.1:+60871728 | None:intergenic |
GGTAGAGATCAGTGTTATAG+CGG | 0.619529 | 2.1:+60871612 | None:intergenic |
CCTCTTCCTGATGAAGTAGG+AGG | 0.620683 | 2.1:-60871044 | MS.gene03060:CDS |
TCGAGGTTGATCGGAATCGG+AGG | 0.626817 | 2.1:+60871714 | None:intergenic |
ATCATCGATTTGGTTAGGGT+AGG | 0.627815 | 2.1:+60871578 | None:intergenic |
ACCCTAACACGCATAAACAT+CGG | 0.628118 | 2.1:-60871421 | MS.gene03060:CDS |
GTAGAATGTAATTTCATTGG+GGG | 0.628917 | 2.1:+60871445 | None:intergenic |
GGAGTGATTGTACTGGTAAG+CGG | 0.634284 | 2.1:+60871735 | None:intergenic |
TTTGGCCATTAGAAAAGGCG+AGG | 0.637140 | 2.1:+60871489 | None:intergenic |
TAATGGCGAAGAAACTCGAT+GGG | 0.639985 | 2.1:-60871124 | MS.gene03060:CDS |
ATAATGGCGAAGAAACTCGA+TGG | 0.645335 | 2.1:-60871125 | MS.gene03060:CDS |
AGAGATCAGTGTTATAGCGG+AGG | 0.646918 | 2.1:+60871615 | None:intergenic |
TCTACTATGCTCAAACCATG+GGG | 0.662795 | 2.1:-60871175 | MS.gene03060:CDS |
GGCCATTAGAAAAGGCGAGG+AGG | 0.663994 | 2.1:+60871492 | None:intergenic |
AACCGATAAGAGTGATGTTG+GGG | 0.668832 | 2.1:+60871525 | None:intergenic |
AAGCTGAAGAGTCTGACATG+TGG | 0.676232 | 2.1:+60871242 | None:intergenic |
ATTTCGGCAAGTATTTCGAG+CGG | 0.736183 | 2.1:+60871764 | None:intergenic |
CTACTATGCTCAAACCATGG+GGG | 0.755948 | 2.1:-60871174 | MS.gene03060:CDS |
TTAAATGCGACAATCAACAG+CGG | 0.771267 | 2.1:+60871095 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTGTAGAATGTAATTTCATT+GGG | + | chr2.1:60871283-60871302 | None:intergenic | 20.0% |
! | GTTGTAGAATGTAATTTCAT+TGG | + | chr2.1:60871284-60871303 | None:intergenic | 25.0% |
! | TGTAGAATGTAATTTCATTG+GGG | + | chr2.1:60871282-60871301 | None:intergenic | 25.0% |
!! | AACTCCTAAAATTGATGTTT+TGG | - | chr2.1:60871756-60871775 | MS.gene03060:CDS | 25.0% |
!! | ACTCCTAAAATTGATGTTTT+GGG | - | chr2.1:60871757-60871776 | MS.gene03060:CDS | 25.0% |
!!! | GAAATTCATATTGCTGTTTT+GGG | - | chr2.1:60871703-60871722 | MS.gene03060:CDS | 25.0% |
!!! | TGAAATTCATATTGCTGTTT+TGG | - | chr2.1:60871702-60871721 | MS.gene03060:CDS | 25.0% |
!!! | TGAAATTTCGGGAATTTTTT+AGG | + | chr2.1:60871081-60871100 | None:intergenic | 25.0% |
AAATTCTCTTCACTGGATAA+TGG | - | chr2.1:60871582-60871601 | MS.gene03060:CDS | 30.0% | |
GAATTTGTGGGTATCAATTA+AGG | + | chr2.1:60871047-60871066 | None:intergenic | 30.0% | |
GTAGAATGTAATTTCATTGG+GGG | + | chr2.1:60871281-60871300 | None:intergenic | 30.0% | |
GTGAAGATTGATGAATTTGT+GGG | + | chr2.1:60871059-60871078 | None:intergenic | 30.0% | |
TGACATGTGGATCATAATAA+GGG | + | chr2.1:60871471-60871490 | None:intergenic | 30.0% | |
TTGTTGAAAATTCTCTTCAC+TGG | - | chr2.1:60871575-60871594 | MS.gene03060:CDS | 30.0% | |
! | TCACCCAAAACATCAATTTT+AGG | + | chr2.1:60871763-60871782 | None:intergenic | 30.0% |
!! | TTTTGGGTGATGAAAGAATA+TGG | - | chr2.1:60871773-60871792 | MS.gene03060:CDS | 30.0% |
AGTTTGTAATCGGCAGATAA+TGG | + | chr2.1:60871415-60871434 | None:intergenic | 35.0% | |
CACTGAAAATCTCAAGTGTT+AGG | + | chr2.1:60871654-60871673 | None:intergenic | 35.0% | |
CTGACATGTGGATCATAATA+AGG | + | chr2.1:60871472-60871491 | None:intergenic | 35.0% | |
GGTGAAGATTGATGAATTTG+TGG | + | chr2.1:60871060-60871079 | None:intergenic | 35.0% | |
TGATAGGAAGAGGTAGAAAA+GGG | + | chr2.1:60871333-60871352 | None:intergenic | 35.0% | |
TTAAATGCGACAATCAACAG+CGG | + | chr2.1:60871631-60871650 | None:intergenic | 35.0% | |
TTCATGTCAGATTGAGAACA+AGG | + | chr2.1:60871358-60871377 | None:intergenic | 35.0% | |
! | AACACTTGAGATTTTCAGTG+AGG | - | chr2.1:60871654-60871673 | MS.gene03060:CDS | 35.0% |
! | ATTGAGTGGAATCATCGATT+TGG | + | chr2.1:60871158-60871177 | None:intergenic | 35.0% |
! | ATTTTCAACAAAAACCCCCA+TGG | + | chr2.1:60871566-60871585 | None:intergenic | 35.0% |
! | GATTCTGAGGAGTTTGTAAT+CGG | + | chr2.1:60871425-60871444 | None:intergenic | 35.0% |
!! | ACTCTTATCGGTTCATGTAA+CGG | - | chr2.1:60871208-60871227 | MS.gene03060:CDS | 35.0% |
!! | TGGAATCATCGATTTGGTTA+GGG | + | chr2.1:60871152-60871171 | None:intergenic | 35.0% |
!!! | ATTCATATTGCTGTTTTGGG+TGG | - | chr2.1:60871706-60871725 | MS.gene03060:CDS | 35.0% |
!!! | TTCATATTGCTGTTTTGGGT+GGG | - | chr2.1:60871707-60871726 | MS.gene03060:CDS | 35.0% |
AACCGATAAGAGTGATGTTG+GGG | + | chr2.1:60871201-60871220 | None:intergenic | 40.0% | |
ACAAACTCCTCAGAATCTCT+GGG | - | chr2.1:60871428-60871447 | MS.gene03060:CDS | 40.0% | |
ACCCTAACACGCATAAACAT+CGG | - | chr2.1:60871302-60871321 | MS.gene03060:CDS | 40.0% | |
ATAATGGCGAAGAAACTCGA+TGG | - | chr2.1:60871598-60871617 | MS.gene03060:CDS | 40.0% | |
ATCCGATGTTTATGCGTGTT+AGG | + | chr2.1:60871307-60871326 | None:intergenic | 40.0% | |
ATTTCACCTCCTACTTCATC+AGG | + | chr2.1:60871688-60871707 | None:intergenic | 40.0% | |
ATTTCGGCAAGTATTTCGAG+CGG | + | chr2.1:60870962-60870981 | None:intergenic | 40.0% | |
CCACTCAATCATCCTTTCAA+GGG | - | chr2.1:60871169-60871188 | MS.gene03060:CDS | 40.0% | |
CTCTACTATGCTCAAACCAT+GGG | - | chr2.1:60871547-60871566 | MS.gene03060:CDS | 40.0% | |
GAACCGATAAGAGTGATGTT+GGG | + | chr2.1:60871202-60871221 | None:intergenic | 40.0% | |
GAGGATGAGGTTGAAATTTC+GGG | + | chr2.1:60871092-60871111 | None:intergenic | 40.0% | |
GATTGAGAACAAGGAGTGAT+AGG | + | chr2.1:60871349-60871368 | None:intergenic | 40.0% | |
GGAGGATGAGGTTGAAATTT+CGG | + | chr2.1:60871093-60871112 | None:intergenic | 40.0% | |
GGTAGAGATCAGTGTTATAG+CGG | + | chr2.1:60871114-60871133 | None:intergenic | 40.0% | |
GTGATAGGAAGAGGTAGAAA+AGG | + | chr2.1:60871334-60871353 | None:intergenic | 40.0% | |
TAATGGCGAAGAAACTCGAT+GGG | - | chr2.1:60871599-60871618 | MS.gene03060:CDS | 40.0% | |
TACAAACTCCTCAGAATCTC+TGG | - | chr2.1:60871427-60871446 | MS.gene03060:CDS | 40.0% | |
TCAGCTTGAAAACAAACTCG+TGG | - | chr2.1:60871497-60871516 | MS.gene03060:CDS | 40.0% | |
TCCACTCAATCATCCTTTCA+AGG | - | chr2.1:60871168-60871187 | MS.gene03060:CDS | 40.0% | |
TCCGATGTTTATGCGTGTTA+GGG | + | chr2.1:60871306-60871325 | None:intergenic | 40.0% | |
TCTACTATGCTCAAACCATG+GGG | - | chr2.1:60871548-60871567 | MS.gene03060:CDS | 40.0% | |
TCTCTACTATGCTCAAACCA+TGG | - | chr2.1:60871546-60871565 | MS.gene03060:CDS | 40.0% | |
TGAACCGATAAGAGTGATGT+TGG | + | chr2.1:60871203-60871222 | None:intergenic | 40.0% | |
! | AACTGCTGTTTATGCGTTCA+CGG | - | chr2.1:60871376-60871395 | MS.gene03060:CDS | 40.0% |
! | AGCGATTTGGCCATTAGAAA+AGG | + | chr2.1:60871242-60871261 | None:intergenic | 40.0% |
! | GAATTGACTTCGAGGTTGAT+CGG | + | chr2.1:60871021-60871040 | None:intergenic | 40.0% |
! | TAAGGTTCGAATTGACTTCG+AGG | + | chr2.1:60871029-60871048 | None:intergenic | 40.0% |
!! | ATCATCGATTTGGTTAGGGT+AGG | + | chr2.1:60871148-60871167 | None:intergenic | 40.0% |
!! | GTGGAATCATCGATTTGGTT+AGG | + | chr2.1:60871153-60871172 | None:intergenic | 40.0% |
!! | TCATCGATTTGGTTAGGGTA+GGG | + | chr2.1:60871147-60871166 | None:intergenic | 40.0% |
AAGCTGAAGAGTCTGACATG+TGG | + | chr2.1:60871484-60871503 | None:intergenic | 45.0% | |
AATCGGAGGAGTGATTGTAC+TGG | + | chr2.1:60870998-60871017 | None:intergenic | 45.0% | |
AGAGATCAGTGTTATAGCGG+AGG | + | chr2.1:60871111-60871130 | None:intergenic | 45.0% | |
AGCCCCAACATCACTCTTAT+CGG | - | chr2.1:60871196-60871215 | MS.gene03060:CDS | 45.0% | |
CCCTTGAAAGGATGATTGAG+TGG | + | chr2.1:60871172-60871191 | None:intergenic | 45.0% | |
CCTCAGAATCTCTGGGTTAA+CGG | - | chr2.1:60871435-60871454 | MS.gene03060:CDS | 45.0% | |
CTACTATGCTCAAACCATGG+GGG | - | chr2.1:60871549-60871568 | MS.gene03060:CDS | 45.0% | |
GAACAAGGAGTGATAGGAAG+AGG | + | chr2.1:60871343-60871362 | None:intergenic | 45.0% | |
GTTCCTCTTCCTGATGAAGT+AGG | - | chr2.1:60871676-60871695 | MS.gene03060:CDS | 45.0% | |
TGGTAAGCGGGAGAAGATTT+CGG | + | chr2.1:60870978-60870997 | None:intergenic | 45.0% | |
TGTTTATGCGTTCACGGCTT+TGG | - | chr2.1:60871382-60871401 | MS.gene03060:CDS | 45.0% | |
TTAGGGTAGGGAAATCGAGT+TGG | + | chr2.1:60871135-60871154 | None:intergenic | 45.0% | |
TTTGGCCATTAGAAAAGGCG+AGG | + | chr2.1:60871237-60871256 | None:intergenic | 45.0% | |
! | ACTTCGAGGTTGATCGGAAT+CGG | + | chr2.1:60871015-60871034 | None:intergenic | 45.0% |
! | GAGTGATTGTACTGGTAAGC+GGG | + | chr2.1:60870990-60871009 | None:intergenic | 45.0% |
! | GGAGTGATTGTACTGGTAAG+CGG | + | chr2.1:60870991-60871010 | None:intergenic | 45.0% |
! | GTAATTTCATTGGGGGCGTA+AGG | + | chr2.1:60871274-60871293 | None:intergenic | 45.0% |
! | TAGAGAGCGTAAGGCATACT+AGG | + | chr2.1:60871532-60871551 | None:intergenic | 45.0% |
! | TGAGCATAGTAGAGAGCGTA+AGG | + | chr2.1:60871541-60871560 | None:intergenic | 45.0% |
AAGGATGCGCGAAAGCGATT+TGG | + | chr2.1:60871255-60871274 | None:intergenic | 50.0% | |
CCGTTAACCCAGAGATTCTG+AGG | + | chr2.1:60871438-60871457 | None:intergenic | 50.0% | |
CCTCCTACTTCATCAGGAAG+AGG | + | chr2.1:60871682-60871701 | None:intergenic | 50.0% | |
CCTCTTCCTGATGAAGTAGG+AGG | - | chr2.1:60871679-60871698 | MS.gene03060:CDS | 50.0% | |
TTGGGGCTGTTACCCTTGAA+AGG | + | chr2.1:60871184-60871203 | None:intergenic | 50.0% | |
! | CAGTGTTATAGCGGAGGATG+AGG | + | chr2.1:60871105-60871124 | None:intergenic | 50.0% |
GGCCATTAGAAAAGGCGAGG+AGG | + | chr2.1:60871234-60871253 | None:intergenic | 55.0% | |
! | GGCCTCCTCGCCTTTTCTAA+TGG | - | chr2.1:60871229-60871248 | MS.gene03060:CDS | 55.0% |
! | TCGAGGTTGATCGGAATCGG+AGG | + | chr2.1:60871012-60871031 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 60870944 | 60871801 | 60870944 | ID=MS.gene03060 |
chr2.1 | mRNA | 60870944 | 60871801 | 60870944 | ID=MS.gene03060.t1;Parent=MS.gene03060 |
chr2.1 | exon | 60870944 | 60871801 | 60870944 | ID=MS.gene03060.t1.exon1;Parent=MS.gene03060.t1 |
chr2.1 | CDS | 60870944 | 60871801 | 60870944 | ID=cds.MS.gene03060.t1;Parent=MS.gene03060.t1 |
Gene Sequence |
Protein sequence |