AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44885


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44885.t1 MTR_5g070080 88.372 387 40 2 1 383 1 386 0.0 664
MS.gene44885.t1 MTR_5g070088 65.891 387 122 6 5 383 2 386 4.15e-165 468
MS.gene44885.t1 MTR_5g070130 63.010 392 112 6 5 383 6 377 1.63e-161 458
MS.gene44885.t1 MTR_3g103020 56.806 382 136 7 9 383 19 378 1.88e-134 389
MS.gene44885.t1 MTR_3g034180 50.125 399 154 10 3 382 116 488 1.91e-112 337
MS.gene44885.t1 MTR_4g109270 51.026 390 142 13 10 383 8 364 6.91e-107 318
MS.gene44885.t1 MTR_3g034160 50.877 399 151 12 3 382 2 374 8.74e-107 319
MS.gene44885.t1 MTR_4g109280 50.653 383 151 10 9 383 7 359 1.76e-106 317
MS.gene44885.t1 MTR_1g055135 50.000 394 156 11 5 383 8 375 2.13e-106 318
MS.gene44885.t1 MTR_3g034130 49.610 385 151 9 3 368 2 362 4.23e-106 317
MS.gene44885.t1 MTR_6g060650 52.320 388 158 12 5 382 2 372 1.28e-105 316
MS.gene44885.t1 MTR_4g023090 47.487 398 160 12 8 382 14 385 3.54e-103 310
MS.gene44885.t1 MTR_4g023080 48.670 376 156 9 9 379 8 351 1.65e-102 307
MS.gene44885.t1 MTR_5g097210 48.187 386 157 14 5 377 3 358 2.45e-100 302
MS.gene44885.t1 MTR_4g117770 49.741 386 157 11 8 383 9 367 3.84e-99 299
MS.gene44885.t1 MTR_4g117810 49.741 386 157 11 8 383 9 367 3.84e-99 299
MS.gene44885.t1 MTR_4g117780 48.187 386 163 10 8 383 9 367 1.54e-98 297
MS.gene44885.t1 MTR_4g117850 49.869 381 150 10 8 375 21 373 4.61e-98 296
MS.gene44885.t1 MTR_4g094365 46.234 385 167 12 4 376 2 358 1.36e-96 292
MS.gene44885.t1 MTR_4g021785 48.042 383 156 12 9 383 8 355 1.92e-96 291
MS.gene44885.t1 MTR_4g117720 47.179 390 130 12 9 383 50 378 3.78e-96 291
MS.gene44885.t1 MTR_4g116330 48.731 394 160 14 3 383 16 380 5.75e-96 291
MS.gene44885.t1 MTR_4g117750 49.741 386 142 11 9 376 2 353 4.99e-95 292
MS.gene44885.t1 MTR_4g117750 54.464 112 50 1 267 377 367 478 8.72e-25 105
MS.gene44885.t1 MTR_4g118380 49.189 370 156 9 4 355 2 357 4.51e-94 286
MS.gene44885.t1 MTR_4g023440 47.632 380 132 14 8 383 16 332 2.62e-91 278
MS.gene44885.t1 MTR_4g023380 46.411 418 146 16 1 383 5 379 2.66e-90 277
MS.gene44885.t1 MTR_4g122850 45.968 372 162 12 21 377 12 359 9.39e-90 275
MS.gene44885.t1 MTR_4g023070 45.202 396 156 14 10 377 3 365 8.85e-88 270
MS.gene44885.t1 MTR_8g433040 44.444 396 167 13 1 383 9 364 5.42e-87 268
MS.gene44885.t1 MTR_8g032380 44.444 396 167 13 1 383 9 364 5.42e-87 268
MS.gene44885.t1 MTR_4g023120 44.472 398 160 13 10 379 3 367 9.08e-86 265
MS.gene44885.t1 MTR_8g032390 44.072 388 160 9 1 378 31 371 2.87e-85 264
MS.gene44885.t1 MTR_4g023190 45.220 387 169 12 1 377 1 354 1.65e-83 259
MS.gene44885.t1 MTR_4g023150 44.703 387 172 12 1 377 1 355 6.35e-83 257
MS.gene44885.t1 MTR_1g055165 42.051 390 147 10 1 383 1 318 9.82e-83 255
MS.gene44885.t1 MTR_8g013010 49.819 277 116 5 9 282 53 309 4.29e-82 253
MS.gene44885.t1 MTR_4g116330 45.641 390 139 15 3 383 16 341 2.53e-81 253
MS.gene44885.t1 MTR_4g023200 45.055 364 158 12 24 377 24 355 1.05e-80 251
MS.gene44885.t1 MTR_4g023130 42.147 382 143 10 3 379 2 310 1.57e-78 244
MS.gene44885.t1 MTR_4g121580 44.588 388 147 18 3 372 2 339 4.45e-73 233
MS.gene44885.t1 MTR_1g055195 46.835 316 135 10 77 376 174 472 9.65e-73 235
MS.gene44885.t1 MTR_7g079370 41.209 364 163 15 39 378 16 352 1.34e-61 202
MS.gene44885.t1 MTR_2g048580 36.598 388 181 19 9 383 7 342 5.43e-59 195
MS.gene44885.t1 MTR_4g118400 43.972 282 124 8 103 376 39 294 9.01e-59 193
MS.gene44885.t1 MTR_4g117870 40.764 314 124 9 69 377 6 262 9.79e-59 192
MS.gene44885.t1 MTR_8g102520 37.275 389 157 16 9 383 7 322 6.94e-58 191
MS.gene44885.t1 MTR_4g118370 45.968 248 99 8 140 377 33 255 6.56e-57 187
MS.gene44885.t1 MTR_7g079400 40.498 321 157 11 77 378 28 333 3.63e-54 182
MS.gene44885.t1 MTR_4g116320 52.113 213 90 6 173 376 43 252 5.47e-54 179
MS.gene44885.t1 MTR_8g433030 49.541 218 98 6 169 378 125 338 6.04e-53 179
MS.gene44885.t1 MTR_8g433030 56.977 86 36 1 1 86 31 115 3.79e-19 87.8
MS.gene44885.t1 MTR_4g116340 42.629 251 101 7 8 252 34 247 3.59e-52 174
MS.gene44885.t1 MTR_6g463430 47.115 208 96 5 184 383 1 202 1.25e-46 158
MS.gene44885.t1 MTR_4g117530 45.872 218 80 6 167 383 73 253 4.90e-46 158
MS.gene44885.t1 MTR_1g055175 47.716 197 91 7 196 383 8 201 1.29e-45 155
MS.gene44885.t1 MTR_1g055250 45.238 210 96 8 162 356 37 242 5.52e-45 158
MS.gene44885.t1 MTR_8g040935 45.455 209 104 5 184 383 1 208 6.96e-40 141
MS.gene44885.t1 MTR_4g117430 49.689 161 66 5 128 283 3 153 5.12e-39 137
MS.gene44885.t1 MTR_7g079420 37.584 298 126 13 107 383 886 1144 1.05e-37 145
MS.gene44885.t1 MTR_7g117720 41.096 219 80 8 1 211 1 178 3.02e-35 130
MS.gene44885.t1 MTR_7g117720 53.271 107 42 3 279 377 166 272 3.89e-22 95.1
MS.gene44885.t1 MTR_4g114700 40.541 259 99 11 124 373 6 218 9.68e-35 128
MS.gene44885.t1 MTR_4g109290 42.308 182 47 5 8 184 7 135 1.06e-31 119
MS.gene44885.t1 MTR_1g097490 29.024 379 218 15 10 374 49 390 1.47e-30 120
MS.gene44885.t1 MTR_1g097330 29.653 317 184 8 5 312 11 297 1.68e-30 121
MS.gene44885.t1 MTR_5g022420 29.450 309 177 13 8 310 25 298 2.70e-30 120
MS.gene44885.t1 MTR_5g023000 62.500 96 34 2 289 383 5 99 1.14e-29 110
MS.gene44885.t1 MTR_5g069120 39.698 199 85 7 20 205 1 177 1.36e-29 112
MS.gene44885.t1 MTR_3g036290 31.962 316 166 14 7 313 19 294 1.25e-28 115
MS.gene44885.t1 MTR_2g021150 26.440 382 241 13 8 374 12 368 4.60e-28 113
MS.gene44885.t1 MTR_1g094210 28.219 365 206 17 4 351 51 376 9.70e-28 113
MS.gene44885.t1 MTR_4g118360 55.357 112 43 4 268 376 13 120 1.06e-27 106
MS.gene44885.t1 MTR_1g094210 28.134 359 202 17 4 345 51 370 9.84e-27 110
MS.gene44885.t1 MTR_8g098830 40.123 162 84 4 199 351 37 194 2.01e-26 105
MS.gene44885.t1 MTR_1g097560 29.810 369 197 18 1 350 27 352 2.17e-26 108
MS.gene44885.t1 MTR_2g055970 29.052 327 188 11 9 324 210 503 2.44e-26 110
MS.gene44885.t1 MTR_5g011200 28.115 313 187 11 10 310 17 303 3.22e-26 108
MS.gene44885.t1 MTR_7g070830 28.241 432 213 18 10 375 21 421 6.12e-26 108
MS.gene44885.t1 MTR_2g028140 28.490 351 187 14 10 320 5 331 6.41e-26 108
MS.gene44885.t1 MTR_2g028160 29.494 356 201 15 10 334 5 341 1.10e-25 107
MS.gene44885.t1 MTR_2g021190 26.684 386 232 15 8 374 19 372 1.90e-25 106
MS.gene44885.t1 MTR_2g024110 27.077 325 172 13 10 308 4 289 1.99e-25 106
MS.gene44885.t1 MTR_1g050542 27.941 340 199 14 5 331 53 359 2.48e-25 106
MS.gene44885.t1 MTR_4g061340 27.941 340 166 13 8 314 24 317 3.40e-25 105
MS.gene44885.t1 MTR_4g133170 27.548 363 196 14 10 345 4 326 3.41e-25 105
MS.gene44885.t1 MTR_4g023430 59.574 94 35 2 1 93 32 123 4.62e-25 102
MS.gene44885.t1 MTR_4g023430 54.217 83 33 3 305 383 141 222 2.99e-16 77.4
MS.gene44885.t1 MTR_7g070880 27.083 432 218 18 10 375 21 421 8.56e-25 105
MS.gene44885.t1 MTR_8g467140 29.712 313 185 10 9 312 31 317 1.06e-24 103
MS.gene44885.t1 MTR_5g057790 27.523 327 189 14 10 322 46 338 1.29e-24 104
MS.gene44885.t1 MTR_1g054725 29.358 327 182 16 9 316 19 315 1.53e-24 103
MS.gene44885.t1 MTR_3g030250 29.841 315 172 13 8 312 35 310 1.64e-24 103
MS.gene44885.t1 MTR_2g046920 28.086 324 190 12 6 317 20 312 1.95e-24 103
MS.gene44885.t1 MTR_3g009310 27.011 348 216 9 8 347 40 357 2.05e-24 103
MS.gene44885.t1 MTR_2g046900 29.448 326 191 13 6 317 24 324 2.11e-24 103
MS.gene44885.t1 MTR_2g078900 29.299 314 174 15 8 308 31 309 2.44e-24 103
MS.gene44885.t1 MTR_4g108820 28.846 312 152 12 8 312 40 288 3.04e-24 102
MS.gene44885.t1 MTR_5g057710 28.221 326 186 15 10 321 46 337 3.35e-24 103
MS.gene44885.t1 MTR_3g007410 29.070 344 195 15 13 341 55 364 3.79e-24 103
MS.gene44885.t1 MTR_2g021155 28.933 356 203 15 8 345 34 357 4.15e-24 104
MS.gene44885.t1 MTR_3g010390 27.964 329 199 12 4 313 27 336 7.83e-24 102
MS.gene44885.t1 MTR_4g107820 27.673 318 179 11 10 312 36 317 8.43e-24 102
MS.gene44885.t1 MTR_4g107780 27.673 318 179 11 10 312 36 317 8.43e-24 102
MS.gene44885.t1 MTR_4g107780 27.673 318 179 11 10 312 36 317 1.09e-23 102
MS.gene44885.t1 MTR_4g107820 27.673 318 179 11 10 312 36 317 1.19e-23 102
MS.gene44885.t1 MTR_2g426090 29.226 349 188 16 7 324 4 324 1.99e-23 101
MS.gene44885.t1 MTR_3g083010 28.698 338 176 13 10 308 6 317 2.12e-23 101
MS.gene44885.t1 MTR_3g007330 28.440 327 179 13 8 318 46 333 2.33e-23 100
MS.gene44885.t1 MTR_3g007360 28.205 351 202 15 13 344 55 374 2.87e-23 100
MS.gene44885.t1 MTR_6g065980 28.664 307 175 14 8 308 14 282 3.87e-23 99.8
MS.gene44885.t1 MTR_4g129190 28.696 345 180 14 10 319 6 319 4.24e-23 100
MS.gene44885.t1 MTR_1g056710 27.990 393 219 18 10 375 34 389 5.50e-23 99.8
MS.gene44885.t1 MTR_0064s0160 26.010 396 253 13 9 378 41 422 5.51e-23 100
MS.gene44885.t1 MTR_7g079450 45.390 141 68 6 247 383 2 137 5.79e-23 94.0
MS.gene44885.t1 MTR_3g006670 27.019 359 203 14 8 346 47 366 6.14e-23 99.8
MS.gene44885.t1 MTR_3g014570 28.182 330 189 14 8 321 27 324 6.76e-23 99.4
MS.gene44885.t1 MTR_8g101580 25.833 360 216 10 2 344 37 362 8.79e-23 99.4
MS.gene44885.t1 MTR_3g009240 28.349 321 180 11 8 314 34 318 9.80e-23 99.0
MS.gene44885.t1 MTR_3g006500 28.616 318 182 12 8 312 15 300 1.12e-22 98.6
MS.gene44885.t1 MTR_2g046830 29.630 324 185 16 6 317 21 313 1.15e-22 99.0
MS.gene44885.t1 MTR_2g031720 26.131 398 243 12 6 380 2 371 1.20e-22 99.0
MS.gene44885.t1 MTR_2g047832 29.586 338 187 15 6 317 25 337 2.21e-22 98.2
MS.gene44885.t1 MTR_3g014540 28.969 359 193 18 8 345 27 344 2.29e-22 97.8
MS.gene44885.t1 MTR_2g426070 28.011 357 178 14 11 324 7 327 3.13e-22 97.8
MS.gene44885.t1 MTR_2g025420 27.807 374 189 15 10 334 6 347 3.22e-22 97.8
MS.gene44885.t1 MTR_1g068835 26.625 323 184 13 10 313 4 292 3.67e-22 97.1
MS.gene44885.t1 MTR_4g070550 28.614 332 179 12 10 308 5 311 4.38e-22 97.4
MS.gene44885.t1 MTR_7g007300 26.935 323 177 13 10 316 103 382 5.18e-22 97.4
MS.gene44885.t1 MTR_4g055060 29.118 340 172 16 3 313 23 322 6.64e-22 96.7
MS.gene44885.t1 MTR_0667s0010 25.852 352 177 13 10 320 6 314 8.62e-22 96.3
MS.gene44885.t1 MTR_7g067680 27.184 309 173 12 8 308 47 311 9.94e-22 96.3
MS.gene44885.t1 MTR_3g083640 25.000 380 242 12 8 374 53 402 1.15e-21 95.9
MS.gene44885.t1 MTR_1g115160 27.974 311 179 14 9 310 21 295 1.33e-21 95.5
MS.gene44885.t1 MTR_5g057690 26.935 323 186 13 10 322 46 328 1.37e-21 95.5
MS.gene44885.t1 MTR_4g028510 26.024 415 224 19 13 377 19 400 1.50e-21 96.3
MS.gene44885.t1 MTR_2g028130 28.152 341 179 15 10 313 5 316 1.66e-21 95.5
MS.gene44885.t1 MTR_5g046300 26.154 325 193 13 8 320 2 291 1.68e-21 94.7
MS.gene44885.t1 MTR_5g046290 26.154 325 193 13 8 320 2 291 1.68e-21 94.7
MS.gene44885.t1 MTR_3g036335 26.727 333 189 13 8 321 39 335 1.70e-21 95.5
MS.gene44885.t1 MTR_3g011100 24.937 397 240 12 8 374 233 601 1.86e-21 96.7
MS.gene44885.t1 MTR_3g023930 29.126 309 169 14 6 308 30 294 2.57e-21 94.7
MS.gene44885.t1 MTR_2g029990 24.934 381 239 16 11 374 52 402 3.39e-21 94.7
MS.gene44885.t1 MTR_6g021880 27.245 323 191 11 21 324 31 328 3.43e-21 94.4
MS.gene44885.t1 MTR_0044s0300 28.308 325 164 13 8 308 36 315 3.46e-21 94.4
MS.gene44885.t1 MTR_4g013180 26.521 411 232 12 9 374 10 395 3.52e-21 95.1
MS.gene44885.t1 MTR_0115s0020 24.146 410 249 16 10 378 10 398 3.90e-21 94.4
MS.gene44885.t1 MTR_8g073550 30.189 212 116 6 8 211 28 215 4.36e-21 91.3
MS.gene44885.t1 MTR_6g053240 26.582 316 192 13 8 308 26 316 5.63e-21 94.0
MS.gene44885.t1 MTR_1g055070 28.058 278 157 12 10 266 49 304 7.29e-21 93.6
MS.gene44885.t1 MTR_4g028660 24.460 417 229 20 9 375 15 395 7.41e-21 93.6
MS.gene44885.t1 MTR_4g027450 24.460 417 229 20 9 375 15 395 7.41e-21 93.6
MS.gene44885.t1 MTR_3g072470 27.595 395 198 18 13 366 22 369 8.03e-21 93.6
MS.gene44885.t1 MTR_3g013740 26.606 327 204 10 10 320 44 350 1.06e-20 93.2
MS.gene44885.t1 MTR_5g007610 26.331 357 210 14 8 343 39 363 1.14e-20 93.2
MS.gene44885.t1 MTR_3g007270 24.540 326 200 11 8 313 45 344 1.27e-20 93.2
MS.gene44885.t1 MTR_5g057020 26.154 325 181 13 10 322 46 323 2.39e-20 91.7
MS.gene44885.t1 MTR_7g077970 27.778 342 208 11 8 321 5 335 2.43e-20 92.4
MS.gene44885.t1 MTR_5g069760 26.023 342 197 11 9 326 5 314 2.44e-20 91.7
MS.gene44885.t1 MTR_1g114700 26.801 347 217 13 8 344 27 346 3.17e-20 91.7
MS.gene44885.t1 MTR_2g046800 27.893 337 209 13 8 322 12 336 3.28e-20 91.7
MS.gene44885.t1 MTR_7g078860 28.035 346 191 14 9 321 8 328 4.45e-20 91.3
MS.gene44885.t1 MTR_1g068875 26.667 345 199 15 10 334 4 314 4.68e-20 91.3
MS.gene44885.t1 MTR_3g030330 30.218 321 162 16 6 308 16 292 5.95e-20 90.9
MS.gene44885.t1 MTR_7g060940 29.191 346 162 15 10 314 22 325 7.14e-20 90.9
MS.gene44885.t1 MTR_6g027910 26.065 399 228 17 10 374 9 374 8.95e-20 90.1
MS.gene44885.t1 MTR_0464s0020 28.286 350 187 16 13 321 26 352 9.59e-20 90.5
MS.gene44885.t1 MTR_0760s0010 28.333 300 178 11 15 309 52 319 1.06e-19 90.1
MS.gene44885.t1 MTR_0128s0020 27.566 341 188 13 10 321 18 328 1.17e-19 90.1
MS.gene44885.t1 MTR_8g099460 27.928 333 174 14 10 312 5 301 1.20e-19 90.1
MS.gene44885.t1 MTR_6g053260 26.688 311 193 13 8 308 335 620 1.22e-19 91.3
MS.gene44885.t1 MTR_3g011060 30.556 360 192 19 8 343 26 351 1.24e-19 90.1
MS.gene44885.t1 MTR_2g426060 27.841 352 186 14 10 324 6 326 1.34e-19 90.1
MS.gene44885.t1 MTR_2g426020 26.933 375 200 15 10 347 6 343 1.37e-19 90.1
MS.gene44885.t1 MTR_4g031770 26.235 324 188 12 10 316 4 293 1.47e-19 89.4
MS.gene44885.t1 MTR_2g026010 27.907 344 183 13 10 324 4 311 1.70e-19 89.7
MS.gene44885.t1 MTR_3g036430 25.066 379 218 14 8 374 18 342 2.30e-19 88.6
MS.gene44885.t1 MTR_7g056290 28.613 346 184 16 13 321 25 344 2.47e-19 89.4
MS.gene44885.t1 MTR_3g013770 28.704 324 181 14 8 312 31 323 2.53e-19 89.0
MS.gene44885.t1 MTR_5g022040 27.123 365 200 16 10 315 40 397 2.53e-19 89.7
MS.gene44885.t1 MTR_7g056390 28.895 353 174 16 13 321 21 340 2.64e-19 89.4
MS.gene44885.t1 MTR_7g079640 25.668 374 234 13 4 358 7 355 2.90e-19 89.0
MS.gene44885.t1 MTR_7g055870 26.966 356 195 14 13 321 16 353 3.05e-19 89.4
MS.gene44885.t1 MTR_5g046260 24.214 318 170 11 8 316 2 257 3.06e-19 87.4
MS.gene44885.t1 MTR_3g010430 26.257 358 209 14 8 348 34 353 3.11e-19 89.0
MS.gene44885.t1 MTR_2g021210 25.776 322 193 12 5 316 79 364 3.24e-19 89.0
MS.gene44885.t1 MTR_3g030350 26.042 384 241 12 8 374 33 390 4.59e-19 88.2
MS.gene44885.t1 MTR_8g046310 25.581 387 241 14 13 379 19 378 4.76e-19 88.2
MS.gene44885.t1 MTR_5g048160 25.783 415 235 18 10 378 4 391 5.14e-19 88.2
MS.gene44885.t1 MTR_4g122860 36.667 180 89 3 201 376 156 314 5.46e-19 87.4
MS.gene44885.t1 MTR_4g122860 55.000 80 33 2 8 86 68 145 2.84e-14 73.6
MS.gene44885.t1 MTR_1g055200 51.190 84 36 2 124 205 5 85 5.60e-19 82.0
MS.gene44885.t1 MTR_2g024100 27.190 331 170 12 14 308 11 306 6.56e-19 88.2
MS.gene44885.t1 MTR_7g017130 26.570 414 230 19 10 382 18 398 7.33e-19 87.8
MS.gene44885.t1 MTR_1g068860 26.006 323 188 12 10 313 4 294 7.88e-19 87.4
MS.gene44885.t1 MTR_4g122840 41.538 130 37 2 254 378 165 260 9.01e-19 85.5
MS.gene44885.t1 MTR_4g030830 25.974 385 195 14 3 334 2 349 9.88e-19 87.4
MS.gene44885.t1 MTR_3g007430 27.019 322 174 15 13 312 46 328 1.03e-18 87.4
MS.gene44885.t1 MTR_3g030310 26.433 314 192 10 8 308 19 306 1.06e-18 87.4
MS.gene44885.t1 MTR_7g066850 25.182 413 236 16 10 377 23 407 1.09e-18 87.8
MS.gene44885.t1 MTR_3g024110 25.987 304 193 10 8 308 99 373 1.21e-18 87.4
MS.gene44885.t1 MTR_4g019990 26.406 409 231 16 9 373 5 387 1.24e-18 87.0
MS.gene44885.t1 MTR_3g011020 28.399 331 180 13 8 322 26 315 1.28e-18 86.7
MS.gene44885.t1 MTR_2g021050 27.964 329 163 15 10 312 5 285 1.30e-18 87.0
MS.gene44885.t1 MTR_7g050480 28.963 328 169 12 9 308 21 312 1.37e-18 87.0
MS.gene44885.t1 MTR_7g070440 27.746 346 192 13 5 323 2 316 1.41e-18 86.7
MS.gene44885.t1 MTR_0054s0090 23.445 418 242 14 9 377 16 404 1.41e-18 87.0
MS.gene44885.t1 MTR_1g088120 26.225 347 193 11 13 321 13 334 1.47e-18 87.0
MS.gene44885.t1 MTR_2g031640 26.271 354 198 17 10 337 6 322 1.69e-18 86.7
MS.gene44885.t1 MTR_4g013175 27.446 419 222 16 13 368 13 412 1.90e-18 86.7
MS.gene44885.t1 MTR_7g017170 26.757 370 207 16 10 346 18 356 2.05e-18 86.7
MS.gene44885.t1 MTR_2g043410 30.205 341 180 17 13 321 25 339 2.39e-18 86.3
MS.gene44885.t1 MTR_2g425980 26.087 345 176 15 10 312 5 312 3.45e-18 85.9
MS.gene44885.t1 MTR_7g055930 25.698 358 197 13 13 321 16 353 3.46e-18 85.9
MS.gene44885.t1 MTR_0627s0010 24.737 380 228 15 10 356 38 392 3.52e-18 85.9
MS.gene44885.t1 MTR_2g461450 29.503 322 168 15 10 314 18 297 3.74e-18 85.1
MS.gene44885.t1 MTR_2g043400 28.698 338 189 15 13 321 26 340 3.79e-18 85.9
MS.gene44885.t1 MTR_8g046200 24.408 422 258 13 7 379 13 422 4.27e-18 85.9
MS.gene44885.t1 MTR_7g061090 26.000 350 188 16 9 317 21 340 4.58e-18 85.5
MS.gene44885.t1 MTR_2g078850 27.124 306 184 11 13 308 33 309 5.06e-18 85.1
MS.gene44885.t1 MTR_5g021880 25.215 349 202 10 10 308 39 378 5.36e-18 85.9
MS.gene44885.t1 MTR_2g021800 26.150 413 244 19 9 375 15 412 6.03e-18 85.1
MS.gene44885.t1 MTR_1g112930 26.710 307 188 13 8 307 23 299 6.10e-18 84.7
MS.gene44885.t1 MTR_5g021880 25.215 349 202 10 10 308 39 378 6.11e-18 85.9
MS.gene44885.t1 MTR_5g021880 25.215 349 202 10 10 308 39 378 6.21e-18 85.5
MS.gene44885.t1 MTR_7g062060 26.705 352 200 15 9 322 11 342 7.80e-18 84.7
MS.gene44885.t1 MTR_7g013590 26.176 340 202 15 3 322 24 334 8.41e-18 84.7
MS.gene44885.t1 MTR_5g022090 28.135 327 166 15 4 309 25 303 9.70e-18 84.3
MS.gene44885.t1 MTR_7g066000 25.641 351 188 15 9 320 24 340 1.00e-17 84.3
MS.gene44885.t1 MTR_5g027330 23.641 368 223 13 14 357 44 377 1.07e-17 84.7
MS.gene44885.t1 MTR_5g027370 23.641 368 223 13 14 357 33 366 1.13e-17 84.7
MS.gene44885.t1 MTR_1g054575 26.567 335 193 16 5 325 47 342 1.50e-17 84.7
MS.gene44885.t1 MTR_5g008530 71.930 57 14 1 10 66 18 72 1.72e-17 76.6
MS.gene44885.t1 MTR_7g050520 28.354 328 171 12 9 308 21 312 1.74e-17 83.6
MS.gene44885.t1 MTR_6g086825 24.940 417 238 17 9 377 69 458 1.85e-17 84.0
MS.gene44885.t1 MTR_7g052150 28.614 339 182 16 10 321 22 327 1.86e-17 83.6
MS.gene44885.t1 MTR_3g024040 25.321 312 190 12 17 321 38 313 1.89e-17 83.6
MS.gene44885.t1 MTR_2g031680 24.085 328 183 11 10 312 6 292 1.90e-17 83.6
MS.gene44885.t1 MTR_3g024150 26.282 312 177 14 13 308 38 312 2.40e-17 83.2
MS.gene44885.t1 MTR_1g058190 25.617 324 177 11 9 316 34 309 2.92e-17 82.8
MS.gene44885.t1 MTR_4g014370 23.716 409 261 14 9 377 10 407 3.12e-17 83.2
MS.gene44885.t1 MTR_4g013185 26.773 437 223 19 13 375 13 426 3.50e-17 83.2
MS.gene44885.t1 MTR_3g437520 28.000 350 191 15 13 321 26 355 3.99e-17 83.2
MS.gene44885.t1 MTR_5g059430 24.578 415 252 19 9 377 25 424 5.61e-17 82.4
MS.gene44885.t1 MTR_7g016930 25.595 336 183 15 9 317 15 310 6.59e-17 81.3
MS.gene44885.t1 MTR_7g057270 25.937 347 189 14 10 317 26 343 7.00e-17 82.0
MS.gene44885.t1 MTR_3g023940 25.231 325 179 11 8 308 32 316 7.20e-17 81.6
MS.gene44885.t1 MTR_4g024890 26.471 374 214 14 1 339 1 348 7.36e-17 81.6
MS.gene44885.t1 MTR_1g442850 26.190 336 190 14 13 320 8 313 7.82e-17 81.6
MS.gene44885.t1 MTR_1g055375 24.149 323 197 12 13 316 7 300 1.14e-16 80.9
MS.gene44885.t1 MTR_3g007300 27.692 325 164 15 8 322 47 310 1.21e-16 80.9
MS.gene44885.t1 MTR_1g055145 50.562 89 44 0 13 101 36 124 1.34e-16 79.7
MS.gene44885.t1 MTR_7g056003 28.125 352 172 16 13 321 18 331 1.34e-16 81.3
MS.gene44885.t1 MTR_4g130330 24.757 412 247 19 5 377 2 389 1.36e-16 80.9
MS.gene44885.t1 MTR_4g055820 23.988 346 213 11 3 312 7 338 1.40e-16 80.9
MS.gene44885.t1 MTR_7g079160 28.421 380 202 19 13 334 11 378 1.45e-16 81.3
MS.gene44885.t1 MTR_0054s0100 22.619 420 245 13 9 377 16 406 1.64e-16 80.9
MS.gene44885.t1 MTR_0242s0060 25.287 348 203 13 9 321 8 333 1.75e-16 80.9
MS.gene44885.t1 MTR_0242s0040 25.287 348 203 13 9 321 8 333 1.75e-16 80.9
MS.gene44885.t1 MTR_0128s0070 26.239 343 195 13 7 321 19 331 1.88e-16 80.5
MS.gene44885.t1 MTR_4g028750 27.405 343 192 18 2 308 8 329 2.05e-16 80.5
MS.gene44885.t1 MTR_6g055210 26.000 350 195 14 8 320 20 342 2.54e-16 80.5
MS.gene44885.t1 MTR_7g052670 25.234 428 235 17 9 374 20 424 2.56e-16 80.5
MS.gene44885.t1 MTR_2g022000 25.320 391 232 18 9 353 15 391 3.27e-16 80.1
MS.gene44885.t1 MTR_7g017040 25.899 417 234 20 9 382 15 399 3.30e-16 80.1
MS.gene44885.t1 MTR_5g069930 25.872 344 182 11 9 317 5 310 3.59e-16 79.7
MS.gene44885.t1 MTR_7g078840 27.606 355 204 15 9 321 9 352 3.77e-16 80.1
MS.gene44885.t1 MTR_7g445890 25.000 384 197 13 10 351 16 350 3.84e-16 79.7
MS.gene44885.t1 MTR_4g117550 26.617 402 223 20 9 381 16 374 4.34e-16 79.3
MS.gene44885.t1 MTR_1g061330 23.192 401 233 13 10 379 4 360 4.48e-16 79.3
MS.gene44885.t1 MTR_6g034720 40.833 120 63 4 151 264 53 170 5.24e-16 76.6
MS.gene44885.t1 MTR_3g010520 26.837 313 168 13 8 308 23 286 5.75e-16 79.0
MS.gene44885.t1 MTR_6g090180 23.786 412 256 12 4 375 41 434 6.56e-16 79.3
MS.gene44885.t1 MTR_3g009260 26.250 320 185 11 8 314 39 320 6.95e-16 79.0
MS.gene44885.t1 MTR_3g010970 26.885 305 175 14 13 308 51 316 8.37e-16 78.6
MS.gene44885.t1 MTR_6g013270 27.052 329 175 13 8 310 27 316 8.76e-16 78.6
MS.gene44885.t1 MTR_2g104340 22.881 354 215 11 1 318 5 336 8.78e-16 78.6
MS.gene44885.t1 MTR_6g048120 27.273 319 194 14 5 308 31 326 8.94e-16 78.6
MS.gene44885.t1 MTR_7g066100 25.882 425 219 17 9 376 10 395 1.01e-15 78.6
MS.gene44885.t1 MTR_7g078900 26.124 356 188 14 13 321 15 342 1.41e-15 78.2
MS.gene44885.t1 MTR_5g096900 29.044 272 164 9 9 265 11 268 1.67e-15 77.0
MS.gene44885.t1 MTR_5g096710 26.822 343 188 14 10 321 23 333 1.73e-15 77.8
MS.gene44885.t1 MTR_2g025960 29.954 217 117 9 125 312 5 215 1.82e-15 77.0
MS.gene44885.t1 MTR_5g057643 27.935 247 145 10 10 249 46 266 2.40e-15 75.9
MS.gene44885.t1 MTR_3g096250 26.266 316 157 12 8 314 45 293 2.49e-15 77.0
MS.gene44885.t1 MTR_0097s0030 25.153 326 191 10 13 314 17 313 3.84e-15 76.6
MS.gene44885.t1 MTR_2g047240 25.153 326 191 10 13 314 17 313 3.84e-15 76.6
MS.gene44885.t1 MTR_5g009060 27.059 340 185 15 8 308 23 338 3.87e-15 76.6
MS.gene44885.t1 MTR_5g056020 25.404 433 230 18 8 374 15 420 4.29e-15 77.0
MS.gene44885.t1 MTR_0267s0050 24.211 380 222 16 13 352 9 362 5.26e-15 76.3
MS.gene44885.t1 MTR_7g077070 25.600 375 223 15 10 343 16 375 5.89e-15 76.3
MS.gene44885.t1 MTR_7g061050 26.979 341 189 10 9 321 12 320 7.04e-15 75.9
MS.gene44885.t1 MTR_2g047200 25.359 418 215 21 10 374 20 393 7.41e-15 75.9
MS.gene44885.t1 MTR_8g066440 25.366 410 238 18 7 375 20 402 8.06e-15 75.9
MS.gene44885.t1 MTR_7g022600 25.070 355 193 13 13 320 26 354 1.11e-14 75.5
MS.gene44885.t1 MTR_7g061010 28.358 335 173 17 10 314 22 319 1.24e-14 75.1
MS.gene44885.t1 MTR_5g069390 24.408 422 239 21 9 379 25 417 1.24e-14 75.5
MS.gene44885.t1 MTR_6g046320 25.723 346 200 13 10 309 39 373 1.29e-14 75.5
MS.gene44885.t1 MTR_6g048140 23.529 374 233 14 8 368 37 370 1.36e-14 75.1
MS.gene44885.t1 MTR_2g104280 26.024 415 237 18 9 377 13 403 1.44e-14 75.1
MS.gene44885.t1 MTR_2g078870 27.979 193 109 8 127 308 59 232 1.46e-14 74.3
MS.gene44885.t1 MTR_6g007135 25.836 329 184 13 13 315 29 323 1.47e-14 75.1
MS.gene44885.t1 MTR_2g021770 24.138 406 252 14 13 377 15 405 1.70e-14 74.7
MS.gene44885.t1 MTR_6g016285 23.733 434 225 14 10 374 21 417 1.94e-14 74.7
MS.gene44885.t1 MTR_5g037680 24.088 411 223 19 13 374 11 381 2.00e-14 74.7
MS.gene44885.t1 MTR_5g043160 26.211 351 194 16 13 317 53 384 2.02e-14 74.7
MS.gene44885.t1 MTR_1g029650 26.190 336 196 15 13 321 11 321 2.09e-14 74.7
MS.gene44885.t1 MTR_3g058480 27.007 274 158 10 8 266 37 283 2.36e-14 73.9
MS.gene44885.t1 MTR_7g078040 25.937 347 213 12 10 321 9 346 2.51e-14 74.3
MS.gene44885.t1 MTR_4g028680 24.396 414 238 19 9 377 15 398 2.51e-14 74.3
MS.gene44885.t1 MTR_5g096630 23.112 437 231 16 10 380 18 415 2.97e-14 73.9
MS.gene44885.t1 MTR_7g056260 26.284 331 185 14 13 314 17 317 3.11e-14 73.2
MS.gene44885.t1 MTR_2g021252 23.262 374 238 11 13 375 50 385 3.30e-14 73.9
MS.gene44885.t1 MTR_7g069550 23.410 393 236 12 1 352 5 373 3.60e-14 73.9
MS.gene44885.t1 MTR_7g028660 25.000 348 196 11 9 320 10 328 4.55e-14 73.2
MS.gene44885.t1 MTR_2g064950 24.485 388 212 14 13 354 13 365 5.87e-14 73.2
MS.gene44885.t1 MTR_0707s0020 23.218 435 253 17 9 376 25 445 6.07e-14 73.2
MS.gene44885.t1 MTR_7g056797 25.735 408 234 17 9 374 22 402 6.22e-14 73.2
MS.gene44885.t1 MTR_7g066030 24.789 355 200 12 2 317 13 339 6.75e-14 73.2
MS.gene44885.t1 MTR_7g055987 28.779 344 163 17 13 321 23 319 9.43e-14 72.4
MS.gene44885.t1 MTR_7g056737 27.248 367 194 13 9 338 21 351 1.00e-13 72.4
MS.gene44885.t1 MTR_0129s0070 24.384 406 237 19 13 379 20 394 1.01e-13 72.4
MS.gene44885.t1 MTR_6g017280 25.664 339 199 13 10 321 9 321 1.15e-13 72.0
MS.gene44885.t1 MTR_4g030110 24.165 389 205 14 10 352 30 374 1.25e-13 72.0
MS.gene44885.t1 MTR_5g010660 25.325 308 191 10 10 308 34 311 1.50e-13 72.0
MS.gene44885.t1 MTR_5g023570 43.478 92 48 3 9 100 36 123 1.52e-13 67.8
MS.gene44885.t1 MTR_5g057040 29.665 209 116 9 10 211 46 230 1.52e-13 72.8
MS.gene44885.t1 MTR_4g033495 25.072 347 189 16 10 319 27 339 1.67e-13 72.0
MS.gene44885.t1 MTR_2g437110 24.773 331 213 10 10 322 22 334 1.79e-13 72.0
MS.gene44885.t1 MTR_7g056170 23.370 368 198 10 1 321 66 396 1.95e-13 71.6
MS.gene44885.t1 MTR_3g010440 25.625 320 153 11 8 322 24 263 2.08e-13 70.9
MS.gene44885.t1 MTR_7g062100 24.694 409 228 16 10 374 24 396 2.34e-13 71.2
MS.gene44885.t1 MTR_7g091640 24.484 339 195 13 9 314 34 344 3.06e-13 70.9
MS.gene44885.t1 MTR_4g102410 23.301 412 250 15 9 377 60 448 4.11e-13 70.9
MS.gene44885.t1 MTR_5g096910 23.529 408 241 14 9 377 16 391 4.42e-13 70.5
MS.gene44885.t1 MTR_7g055977 24.332 337 195 13 9 317 6 310 5.52e-13 70.1
MS.gene44885.t1 MTR_0649s0020 25.659 417 218 19 10 374 11 387 6.01e-13 70.1
MS.gene44885.t1 MTR_4g006350 25.770 357 208 14 10 332 494 827 6.70e-13 70.9
MS.gene44885.t1 MTR_3g011650 26.360 239 140 9 8 241 77 284 7.98e-13 68.6
MS.gene44885.t1 MTR_5g097330 24.311 399 248 14 13 375 19 399 8.69e-13 69.7
MS.gene44885.t1 MTR_8g101940 26.503 366 204 16 10 346 2 331 9.21e-13 69.3
MS.gene44885.t1 MTR_7g055850 30.928 194 102 7 13 183 16 200 1.00e-12 68.6
MS.gene44885.t1 MTR_6g086920 23.163 449 250 18 9 376 37 471 1.10e-12 69.7
MS.gene44885.t1 MTR_4g037465 25.000 360 208 16 8 334 19 349 1.44e-12 68.9
MS.gene44885.t1 MTR_1g115185 26.646 319 200 13 8 316 37 331 1.52e-12 68.9
MS.gene44885.t1 MTR_7g077990 25.150 334 199 13 10 319 17 323 1.65e-12 68.6
MS.gene44885.t1 MTR_3g009250 27.197 239 137 8 8 241 39 245 2.36e-12 66.6
MS.gene44885.t1 MTR_7g035295 26.154 390 191 19 13 359 19 354 3.01e-12 67.8
MS.gene44885.t1 MTR_6g017305 26.702 191 125 5 138 314 14 203 3.45e-12 66.6
MS.gene44885.t1 MTR_4g031020 25.843 356 198 16 10 314 15 355 4.62e-12 67.4
MS.gene44885.t1 MTR_8g039500 26.284 331 180 14 9 308 11 308 5.02e-12 67.0
MS.gene44885.t1 MTR_3g058440 25.869 259 150 10 10 254 35 265 5.83e-12 66.2
MS.gene44885.t1 MTR_5g043605 27.219 338 201 18 77 381 14 339 5.98e-12 67.0
MS.gene44885.t1 MTR_8g013005 61.404 57 20 2 328 383 4 59 6.77e-12 60.5
MS.gene44885.t1 MTR_2g021950 25.378 331 193 14 13 308 19 330 1.19e-11 66.2
MS.gene44885.t1 MTR_3g006300 62.791 43 16 0 8 50 28 70 2.65e-11 60.1
MS.gene44885.t1 MTR_4g030090 26.627 338 173 14 10 308 14 315 2.74e-11 65.1
MS.gene44885.t1 MTR_7g056200 25.434 346 166 16 9 317 22 312 2.82e-11 64.7
MS.gene44885.t1 MTR_2g047892 25.305 328 188 13 10 308 22 321 3.02e-11 64.7
MS.gene44885.t1 MTR_5g072060 24.923 325 201 10 9 312 5 307 3.77e-11 65.1
MS.gene44885.t1 MTR_0831s0010 24.010 404 235 19 9 375 49 417 4.33e-11 64.3
MS.gene44885.t1 MTR_7g066080 26.301 346 193 15 10 320 16 334 6.27e-11 63.9
MS.gene44885.t1 MTR_7g050490 30.189 212 108 8 9 210 7 188 7.33e-11 61.2
MS.gene44885.t1 MTR_8g063310 24.852 338 206 14 3 313 15 331 8.09e-11 63.5
MS.gene44885.t1 MTR_5g046280 25.123 203 131 9 127 320 4 194 8.31e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44885.t1 AT3G23880 30.514 331 177 13 1 310 1 299 1.43e-26 109
MS.gene44885.t1 AT3G06240 26.901 342 198 12 6 311 32 357 1.81e-23 101
MS.gene44885.t1 AT4G12560 27.273 330 185 12 10 313 4 304 5.82e-21 94.0
MS.gene44885.t1 AT4G12560 27.273 330 185 12 10 313 4 304 5.82e-21 94.0
MS.gene44885.t1 AT4G12560 27.273 330 185 12 10 313 4 304 5.82e-21 94.0
MS.gene44885.t1 AT2G40925 26.667 330 191 14 4 312 21 320 1.37e-18 87.0
MS.gene44885.t1 AT2G40910 26.006 323 195 11 10 313 69 366 3.66e-18 86.3
MS.gene44885.t1 AT2G40910 26.006 323 195 11 10 313 62 359 4.86e-18 85.9
MS.gene44885.t1 AT2G16810 28.464 267 155 10 9 267 40 278 4.37e-17 81.3
MS.gene44885.t1 AT3G10240 26.269 335 206 13 10 334 27 330 1.32e-15 78.2
MS.gene44885.t1 AT3G21120 24.151 265 169 9 9 265 2 242 2.93e-15 77.0
MS.gene44885.t1 AT5G62510 26.462 325 201 12 8 320 42 340 1.94e-14 74.7
MS.gene44885.t1 AT3G52320 27.762 353 205 17 8 351 25 336 2.47e-14 74.3
MS.gene44885.t1 AT2G40920 26.168 321 191 16 15 313 59 355 3.00e-14 74.3
MS.gene44885.t1 AT3G16210 24.451 319 181 13 9 316 4 273 5.50e-14 73.2
MS.gene44885.t1 AT2G40920 26.935 323 184 17 16 313 1 296 9.15e-14 72.4
MS.gene44885.t1 AT5G62660 24.590 366 211 15 8 344 39 368 1.72e-13 71.6
MS.gene44885.t1 AT3G47150 54.545 55 25 0 9 63 11 65 1.06e-12 69.3
MS.gene44885.t1 AT3G17490 25.559 313 188 13 8 307 4 284 1.11e-12 69.3
MS.gene44885.t1 AT1G30790 26.523 279 166 12 3 266 2 256 2.55e-12 68.2
MS.gene44885.t1 AT1G50870 23.129 294 193 9 11 298 32 298 6.42e-12 67.0
MS.gene44885.t1 AT1G33530 26.994 326 183 16 10 324 97 378 6.96e-12 67.0
MS.gene44885.t1 AT2G04920 23.457 324 212 11 10 324 4 300 7.93e-12 66.6
MS.gene44885.t1 AT1G47790 24.497 298 183 12 10 298 25 289 1.14e-11 66.2
MS.gene44885.t1 AT5G42430 24.611 321 201 11 1 310 1 291 1.47e-11 65.9
MS.gene44885.t1 AT4G19940 26.198 313 181 12 8 298 33 317 1.68e-11 65.9
MS.gene44885.t1 AT1G32420 24.830 294 181 11 10 298 37 295 7.28e-11 63.2
MS.gene44885.t1 AT4G21240 24.691 324 194 14 10 318 36 324 7.87e-11 63.5

Find 71 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAATTATTTCTATGGTTT+TGG 0.152964 5.2:+59321705 MS.gene44885:CDS
AAGACTCTTGTTCTTTCTTT+TGG 0.207374 5.2:+59322137 MS.gene44885:CDS
GTCCTAGAGTGTATGATTTA+TGG 0.242282 5.2:+59322015 MS.gene44885:CDS
GAATCTTTGCTTTCACTTCC+TGG 0.245425 5.2:+59322323 MS.gene44885:CDS
GTTATTCAAGCCTTTATCTA+TGG 0.251337 5.2:+59321619 MS.gene44885:CDS
TTAGAAGCAAATTATTTCTA+TGG 0.288587 5.2:+59321699 MS.gene44885:CDS
AATACAACGTGCAATCTTCT+TGG 0.293336 5.2:+59322111 MS.gene44885:CDS
ATTAATTCAATAGGTAGATA+TGG 0.309314 5.2:-59321237 None:intergenic
ATAATGGTATAGTTGAAATA+TGG 0.314057 5.2:+59322078 MS.gene44885:CDS
GGATTTATGAACAAAATTCT+AGG 0.331838 5.2:-59321393 None:intergenic
TATGATTTATGGCTATTTAG+AGG 0.334732 5.2:+59322026 MS.gene44885:CDS
ACTTCACTGGTAACCTTAGT+AGG 0.359613 5.2:-59321269 None:intergenic
TAGATAAAGGCTTGAATAAC+CGG 0.360813 5.2:-59321616 None:intergenic
GAAATAATTTGCTTCTAAAT+CGG 0.363111 5.2:-59321694 None:intergenic
AGAGTAGATACACTCTTAAA+TGG 0.363309 5.2:+59321891 MS.gene44885:CDS
ATAGAGTTGCCTTTGCCTAA+TGG 0.368828 5.2:+59321993 MS.gene44885:CDS
TTGGCCAAGTATAATGATAA+AGG 0.374960 5.2:+59322236 MS.gene44885:CDS
TCTGATATGTACATTGATAA+TGG 0.380566 5.2:+59322062 MS.gene44885:CDS
GTGGTTTGTTATCTCACTTT+GGG 0.388159 5.2:+59321787 MS.gene44885:CDS
AGATCAACGAATGTTATTGT+TGG 0.399345 5.2:+59321945 MS.gene44885:CDS
CTGTCCTTTATCATTATACT+TGG 0.401300 5.2:-59322240 None:intergenic
GGTGGTTTGTTATCTCACTT+TGG 0.409078 5.2:+59321786 MS.gene44885:CDS
ATTTGAATGATTAATTCAAT+AGG 0.412441 5.2:-59321246 None:intergenic
ATAGATAGAGATTCAAGATC+TGG 0.413938 5.2:-59321414 None:intergenic
TCCTGGTGGTGACAGTGATC+AGG 0.428106 5.2:+59322340 MS.gene44885:CDS
TCAAGTGCGTTTGTAAGTCT+TGG 0.431776 5.2:+59321304 MS.gene44885:CDS
TGGATGGATTCCATAGATAA+AGG 0.434024 5.2:-59321629 None:intergenic
TTGGATTTCATTTAACAGAA+AGG 0.439356 5.2:+59321964 MS.gene44885:CDS
TCTTAAATGGTGTTATTCAC+TGG 0.442601 5.2:+59321904 MS.gene44885:CDS
TAATCATTCAAATCCTACTA+AGG 0.443687 5.2:+59321256 MS.gene44885:CDS
TTCTTCTTCTTCGTTGGACA+TGG 0.448943 5.2:+59321521 MS.gene44885:CDS
AAATGGTGTTATTCACTGGT+TGG 0.457182 5.2:+59321908 MS.gene44885:CDS
TGATAGTTCTTCTTCTTCGT+TGG 0.464322 5.2:+59321515 MS.gene44885:CDS
TCTAGGAGTGTGTGCGTTGG+CGG 0.479262 5.2:-59321376 None:intergenic
GGAATCATGAACAGTAGTAA+AGG 0.490153 5.2:-59321673 None:intergenic
GAATCATGAACAGTAGTAAA+GGG 0.494070 5.2:-59321672 None:intergenic
CGATAGTGCTTCTTATTCAC+CGG 0.504441 5.2:+59321461 MS.gene44885:CDS
TTAATTCAATAGGTAGATAT+GGG 0.519095 5.2:-59321236 None:intergenic
TCTTACTCGGACCATGATGA+TGG 0.521538 5.2:+59322278 MS.gene44885:CDS
TCATACACTCTAGGACCATT+AGG 0.527398 5.2:-59322008 None:intergenic
TGGAACTGACGATAGTGTAT+TGG 0.529716 5.2:+59322217 MS.gene44885:CDS
TAATGGTATAGTTGAAATAT+GGG 0.533072 5.2:+59322079 MS.gene44885:CDS
TAATACGTGGAAGGAAATTG+AGG 0.533898 5.2:+59321827 MS.gene44885:CDS
CATAGCACATTGAAAGAACC+AGG 0.552532 5.2:-59321752 None:intergenic
GCCTGATCACTGTCACCACC+AGG 0.559608 5.2:-59322341 None:intergenic
TTTGGGCAAAAGTAGTGCAT+GGG 0.560044 5.2:-59322167 None:intergenic
TATCTATGGAATCCATCCAC+TGG 0.565657 5.2:+59321633 MS.gene44885:CDS
GATAACAAACCACCCGCACT+CGG 0.580473 5.2:-59321777 None:intergenic
ATGTGCTATGATCCGAGTGC+GGG 0.591052 5.2:+59321765 MS.gene44885:CDS
AAGCGTATAAGAGACTTCAC+TGG 0.591181 5.2:-59321282 None:intergenic
AATACGTGGAAGGAAATTGA+GGG 0.594846 5.2:+59321828 MS.gene44885:CDS
TGGCTATTTAGAGGATGCCT+CGG 0.603560 5.2:+59322035 MS.gene44885:CDS
ATTGAGAGCTAATACGTGGA+AGG 0.605761 5.2:+59321818 MS.gene44885:CDS
TGAGTCTACTGATGATTACC+TGG 0.607214 5.2:+59321734 MS.gene44885:CDS
TGTCTGTGAACTCCAGTGGA+TGG 0.608402 5.2:-59321645 None:intergenic
GATGTTAGAGGTGAATGTAG+AGG 0.609473 5.2:+59321579 MS.gene44885:CDS
AGCCATAAATCATACACTCT+AGG 0.618217 5.2:-59322017 None:intergenic
CCACTAGGGATCCATCATCA+TGG 0.620597 5.2:-59322289 None:intergenic
TGCTATGATCCGAGTGCGGG+TGG 0.623842 5.2:+59321768 MS.gene44885:CDS
TCTTTGCTTTCACTTCCTGG+TGG 0.625428 5.2:+59322326 MS.gene44885:CDS
ATTCTGTATACATAACCACT+AGG 0.630116 5.2:-59322304 None:intergenic
GCTAGAGCATCACTCTTACT+CGG 0.630676 5.2:+59322265 MS.gene44885:CDS
AATTCTAGGAGTGTGTGCGT+TGG 0.632309 5.2:-59321379 None:intergenic
ACGTGGAAGGAAATTGAGGG+TGG 0.636923 5.2:+59321831 MS.gene44885:CDS
TTCTGTATACATAACCACTA+GGG 0.637981 5.2:-59322303 None:intergenic
TATTTGTCTGTGAACTCCAG+TGG 0.657723 5.2:-59321649 None:intergenic
AATGTGCTATGATCCGAGTG+CGG 0.661055 5.2:+59321764 MS.gene44885:CDS
ACTCTAGGACCATTAGGCAA+AGG 0.668741 5.2:-59322002 None:intergenic
CCATGATGATGGATCCCTAG+TGG 0.673107 5.2:+59322289 MS.gene44885:CDS
TCTCATTGAGAGCTAATACG+TGG 0.692239 5.2:+59321814 MS.gene44885:CDS
TGTACATATCAGATAGACCG+AGG 0.709634 5.2:-59322052 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGAATGATTAATTCAAT+AGG - chr5.2:59321249-59321268 None:intergenic 15.0%
!! TCAAATAAAAAATTAATGTC+CGG - chr5.2:59321483-59321502 None:intergenic 15.0%
!! ACATCAAGATCTAAAAAATA+TGG - chr5.2:59321564-59321583 None:intergenic 20.0%
!! ATAATGGTATAGTTGAAATA+TGG + chr5.2:59322078-59322097 MS.gene44885:CDS 20.0%
!! ATTAATTCAATAGGTAGATA+TGG - chr5.2:59321240-59321259 None:intergenic 20.0%
!! CATCAAGATCTAAAAAATAT+GGG - chr5.2:59321563-59321582 None:intergenic 20.0%
!! TAATGGTATAGTTGAAATAT+GGG + chr5.2:59322079-59322098 MS.gene44885:CDS 20.0%
!! TTAATTCAATAGGTAGATAT+GGG - chr5.2:59321239-59321258 None:intergenic 20.0%
!!! CAAATTATTTCTATGGTTTT+GGG + chr5.2:59321706-59321725 MS.gene44885:CDS 20.0%
!!! CACTTTTTGTACAATATTTT+GGG - chr5.2:59322187-59322206 None:intergenic 20.0%
!!! GAAATAATTTGCTTCTAAAT+CGG - chr5.2:59321697-59321716 None:intergenic 20.0%
!!! GGACATTAATTTTTTATTTG+AGG + chr5.2:59321482-59321501 MS.gene44885:CDS 20.0%
!!! TTAGAAGCAAATTATTTCTA+TGG + chr5.2:59321699-59321718 MS.gene44885:CDS 20.0%
! CCAAAATATTGTACAAAAAG+TGG + chr5.2:59322185-59322204 MS.gene44885:CDS 25.0%
! GGATTTATGAACAAAATTCT+AGG - chr5.2:59321396-59321415 None:intergenic 25.0%
! TAATCATTCAAATCCTACTA+AGG + chr5.2:59321256-59321275 MS.gene44885:CDS 25.0%
! TATGATTTATGGCTATTTAG+AGG + chr5.2:59322026-59322045 MS.gene44885:CDS 25.0%
! TCTGATATGTACATTGATAA+TGG + chr5.2:59322062-59322081 MS.gene44885:CDS 25.0%
! TTGGATTTCATTTAACAGAA+AGG + chr5.2:59321964-59321983 MS.gene44885:CDS 25.0%
!! TTTTTAGATCTTGATGTTAG+AGG + chr5.2:59321567-59321586 MS.gene44885:CDS 25.0%
!!! CCACTTTTTGTACAATATTT+TGG - chr5.2:59322188-59322207 None:intergenic 25.0%
!!! GCAAATTATTTCTATGGTTT+TGG + chr5.2:59321705-59321724 MS.gene44885:CDS 25.0%
AGAGTAGATACACTCTTAAA+TGG + chr5.2:59321891-59321910 MS.gene44885:CDS 30.0%
AGATCAACGAATGTTATTGT+TGG + chr5.2:59321945-59321964 MS.gene44885:CDS 30.0%
ATAGATAGAGATTCAAGATC+TGG - chr5.2:59321417-59321436 None:intergenic 30.0%
ATTCTGTATACATAACCACT+AGG - chr5.2:59322307-59322326 None:intergenic 30.0%
CTGTCCTTTATCATTATACT+TGG - chr5.2:59322243-59322262 None:intergenic 30.0%
GAATCATGAACAGTAGTAAA+GGG - chr5.2:59321675-59321694 None:intergenic 30.0%
GTTATTCAAGCCTTTATCTA+TGG + chr5.2:59321619-59321638 MS.gene44885:CDS 30.0%
TAGATAAAGGCTTGAATAAC+CGG - chr5.2:59321619-59321638 None:intergenic 30.0%
TTCTGTATACATAACCACTA+GGG - chr5.2:59322306-59322325 None:intergenic 30.0%
TTGGCCAAGTATAATGATAA+AGG + chr5.2:59322236-59322255 MS.gene44885:CDS 30.0%
! AAGACTCTTGTTCTTTCTTT+TGG + chr5.2:59322137-59322156 MS.gene44885:CDS 30.0%
!! TCTTAAATGGTGTTATTCAC+TGG + chr5.2:59321904-59321923 MS.gene44885:CDS 30.0%
AATACAACGTGCAATCTTCT+TGG + chr5.2:59322111-59322130 MS.gene44885:CDS 35.0%
AATACGTGGAAGGAAATTGA+GGG + chr5.2:59321828-59321847 MS.gene44885:CDS 35.0%
ACAAAAAGTGGTGATATCGT+TGG + chr5.2:59322197-59322216 MS.gene44885:CDS 35.0%
AGCCATAAATCATACACTCT+AGG - chr5.2:59322020-59322039 None:intergenic 35.0%
GGAATCATGAACAGTAGTAA+AGG - chr5.2:59321676-59321695 None:intergenic 35.0%
GTCCTAGAGTGTATGATTTA+TGG + chr5.2:59322015-59322034 MS.gene44885:CDS 35.0%
TAATACGTGGAAGGAAATTG+AGG + chr5.2:59321827-59321846 MS.gene44885:CDS 35.0%
TGATAGTTCTTCTTCTTCGT+TGG + chr5.2:59321515-59321534 MS.gene44885:CDS 35.0%
! ACTCTTGTTCTTTCTTTTGG+TGG + chr5.2:59322140-59322159 MS.gene44885:CDS 35.0%
! TGGATGGATTCCATAGATAA+AGG - chr5.2:59321632-59321651 None:intergenic 35.0%
!! AAATGGTGTTATTCACTGGT+TGG + chr5.2:59321908-59321927 MS.gene44885:CDS 35.0%
!! AGAGGCTTTATACTTTTCTC+CGG + chr5.2:59321597-59321616 MS.gene44885:CDS 35.0%
!! GTGGTTTGTTATCTCACTTT+GGG + chr5.2:59321787-59321806 MS.gene44885:CDS 35.0%
AAGCGTATAAGAGACTTCAC+TGG - chr5.2:59321285-59321304 None:intergenic 40.0%
ACTTCACTGGTAACCTTAGT+AGG - chr5.2:59321272-59321291 None:intergenic 40.0%
ATAGAGTTGCCTTTGCCTAA+TGG + chr5.2:59321993-59322012 MS.gene44885:CDS 40.0%
ATTGAGAGCTAATACGTGGA+AGG + chr5.2:59321818-59321837 MS.gene44885:CDS 40.0%
CATAGCACATTGAAAGAACC+AGG - chr5.2:59321755-59321774 None:intergenic 40.0%
CGATAGTGCTTCTTATTCAC+CGG + chr5.2:59321461-59321480 MS.gene44885:CDS 40.0%
GAATCTTTGCTTTCACTTCC+TGG + chr5.2:59322323-59322342 MS.gene44885:CDS 40.0%
GATGTTAGAGGTGAATGTAG+AGG + chr5.2:59321579-59321598 MS.gene44885:CDS 40.0%
TATCTATGGAATCCATCCAC+TGG + chr5.2:59321633-59321652 MS.gene44885:CDS 40.0%
TATTTGTCTGTGAACTCCAG+TGG - chr5.2:59321652-59321671 None:intergenic 40.0%
TCAAGTGCGTTTGTAAGTCT+TGG + chr5.2:59321304-59321323 MS.gene44885:CDS 40.0%
TCTCATTGAGAGCTAATACG+TGG + chr5.2:59321814-59321833 MS.gene44885:CDS 40.0%
TGAGTCTACTGATGATTACC+TGG + chr5.2:59321734-59321753 MS.gene44885:CDS 40.0%
TGGAACTGACGATAGTGTAT+TGG + chr5.2:59322217-59322236 MS.gene44885:CDS 40.0%
TGTACATATCAGATAGACCG+AGG - chr5.2:59322055-59322074 None:intergenic 40.0%
TTCTTCTTCTTCGTTGGACA+TGG + chr5.2:59321521-59321540 MS.gene44885:CDS 40.0%
TTTGGGCAAAAGTAGTGCAT+GGG - chr5.2:59322170-59322189 None:intergenic 40.0%
! TTTTGGGCAAAAGTAGTGCA+TGG - chr5.2:59322171-59322190 None:intergenic 40.0%
!! GGTGGTTTGTTATCTCACTT+TGG + chr5.2:59321786-59321805 MS.gene44885:CDS 40.0%
!! TCATACACTCTAGGACCATT+AGG - chr5.2:59322011-59322030 None:intergenic 40.0%
AATGTGCTATGATCCGAGTG+CGG + chr5.2:59321764-59321783 MS.gene44885:CDS 45.0%
TCTTACTCGGACCATGATGA+TGG + chr5.2:59322278-59322297 MS.gene44885:CDS 45.0%
TCTTTGCTTTCACTTCCTGG+TGG + chr5.2:59322326-59322345 MS.gene44885:CDS 45.0%
TGGCTATTTAGAGGATGCCT+CGG + chr5.2:59322035-59322054 MS.gene44885:CDS 45.0%
! AATTCTAGGAGTGTGTGCGT+TGG - chr5.2:59321382-59321401 None:intergenic 45.0%
! GCTAGAGCATCACTCTTACT+CGG + chr5.2:59322265-59322284 MS.gene44885:CDS 45.0%
!! ACTCTAGGACCATTAGGCAA+AGG - chr5.2:59322005-59322024 None:intergenic 45.0%
ACGTGGAAGGAAATTGAGGG+TGG + chr5.2:59321831-59321850 MS.gene44885:CDS 50.0%
ATGTGCTATGATCCGAGTGC+GGG + chr5.2:59321765-59321784 MS.gene44885:CDS 50.0%
CCACTAGGGATCCATCATCA+TGG - chr5.2:59322292-59322311 None:intergenic 50.0%
GATAACAAACCACCCGCACT+CGG - chr5.2:59321780-59321799 None:intergenic 50.0%
TGTCTGTGAACTCCAGTGGA+TGG - chr5.2:59321648-59321667 None:intergenic 50.0%
!! CCATGATGATGGATCCCTAG+TGG + chr5.2:59322289-59322308 MS.gene44885:CDS 50.0%
! TCCTGGTGGTGACAGTGATC+AGG + chr5.2:59322340-59322359 MS.gene44885:CDS 55.0%
! TCTAGGAGTGTGTGCGTTGG+CGG - chr5.2:59321379-59321398 None:intergenic 55.0%
GCCTGATCACTGTCACCACC+AGG - chr5.2:59322344-59322363 None:intergenic 60.0%
TGCTATGATCCGAGTGCGGG+TGG + chr5.2:59321768-59321787 MS.gene44885:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 59321216 59322367 59321216 ID=MS.gene44885
chr5.2 mRNA 59321216 59322367 59321216 ID=MS.gene44885.t1;Parent=MS.gene44885
chr5.2 exon 59321216 59322367 59321216 ID=MS.gene44885.t1.exon1;Parent=MS.gene44885.t1
chr5.2 CDS 59321216 59322367 59321216 ID=cds.MS.gene44885.t1;Parent=MS.gene44885.t1
Gene Sequence

>MS.gene44885

ATGGATGAAGACGAAGAAGACCCATATCTACCTATTGAATTAATCATTCAAATCCTACTAAGGTTACCAGTGAAGTCTCTTATACGCTTCAAGTGCGTTTGTAAGTCTTGGTTTTCTCTCATATCTCAAAATCACTTTGCAAATTCTCATTTTCAACTTACCGCCAACGCACACACTCCTAGAATTTTGTTCATAAATCCAGATCTTGAATCTCTATCTATAGATTTAGAAGCATCTCTTAGCAACGATAGTGCTTCTTATTCACCGGACATTAATTTTTTATTTGAGGAATATGATTATGATAGTTCTTCTTCTTCGTTGGACATGGATTTTTCATCTTCTCACCCATATTTTTTAGATCTTGATGTTAGAGGTGAATGTAGAGGCTTTATACTTTTCTCCGGTTATTCAAGCCTTTATCTATGGAATCCATCCACTGGAGTTCACAGACAAATACCCTTTACTACTGTTCATGATTCCGATTTAGAAGCAAATTATTTCTATGGTTTTGGGTATGATGAGTCTACTGATGATTACCTGGTTCTTTCAATGTGCTATGATCCGAGTGCGGGTGGTTTGTTATCTCACTTTGGGCTTTTCTCATTGAGAGCTAATACGTGGAAGGAAATTGAGGGTGGTGACAATTTGCATTATTCACAGTCGTGTATGTATTCTAGAGTAGATACACTCTTAAATGGTGTTATTCACTGGTTGGCTTTTCGTAATGATAGATCAACGAATGTTATTGTTGGATTTCATTTAACAGAAAGGAAACTTATAGAGTTGCCTTTGCCTAATGGTCCTAGAGTGTATGATTTATGGCTATTTAGAGGATGCCTCGGTCTATCTGATATGTACATTGATAATGGTATAGTTGAAATATGGGTGATGAAAAAATACAACGTGCAATCTTCTTGGACTAAGACTCTTGTTCTTTCTTTTGGTGGCATTCCCATGCACTACTTTTGCCCAAAATATTGTACAAAAAGTGGTGATATCGTTGGAACTGACGATAGTGTATTGGCCAAGTATAATGATAAAGGACAGCTGCTAGAGCATCACTCTTACTCGGACCATGATGATGGATCCCTAGTGGTTATGTATACAGAATCTTTGCTTTCACTTCCTGGTGGTGACAGTGATCAGGCTTAA

Protein sequence

>MS.gene44885.t1

MDEDEEDPYLPIELIIQILLRLPVKSLIRFKCVCKSWFSLISQNHFANSHFQLTANAHTPRILFINPDLESLSIDLEASLSNDSASYSPDINFLFEEYDYDSSSSSLDMDFSSSHPYFLDLDVRGECRGFILFSGYSSLYLWNPSTGVHRQIPFTTVHDSDLEANYFYGFGYDESTDDYLVLSMCYDPSAGGLLSHFGLFSLRANTWKEIEGGDNLHYSQSCMYSRVDTLLNGVIHWLAFRNDRSTNVIVGFHLTERKLIELPLPNGPRVYDLWLFRGCLGLSDMYIDNGIVEIWVMKKYNVQSSWTKTLVLSFGGIPMHYFCPKYCTKSGDIVGTDDSVLAKYNDKGQLLEHHSYSDHDDGSLVVMYTESLLSLPGGDSDQA