AlfalfaGEDB | MS.gene31587

M. sativa cultivar XinJiangDaYe / MS.gene31587

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31587.t1	XP_003588608.1	88.9	289	32	0	19	307	91	379	1.70E-159	572

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31587.t1	G7I558	88.9	289	32	0	19	307	91	379	1.2e-159	572.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene041491	MS.gene31587	PPI
MS.gene31587	MS.gene036581	PPI
MS.gene31587	MS.gene019507	PPI
MS.gene31587	MS.gene033431	PPI
MS.gene059096	MS.gene31587	PPI
MS.gene31587	MS.gene000036	PPI
MS.gene31587	MS.gene50320	PPI
MS.gene31587	MS.gene58314	PPI
MS.gene31587	MS.gene87557	PPI
MS.gene006711	MS.gene31587	PPI
MS.gene31587	MS.gene51199	PPI
MS.gene31587	MS.gene035263	PPI
MS.gene58716	MS.gene31587	PPI
MS.gene064091	MS.gene31587	PPI
MS.gene019505	MS.gene31587	PPI
MS.gene31587	MS.gene67501	PPI
MS.gene31587	MS.gene96406	PPI
MS.gene045476	MS.gene31587	PPI
MS.gene31587	MS.gene27285	PPI
MS.gene58785	MS.gene31587	PPI
MS.gene31587	MS.gene51201	PPI
MS.gene50307	MS.gene31587	PPI
MS.gene31587	MS.gene77857	PPI
MS.gene034690	MS.gene31587	PPI
MS.gene31587	MS.gene50336	PPI
MS.gene31587	MS.gene57526	PPI
MS.gene31587	MS.gene069075	PPI
MS.gene036760	MS.gene31587	PPI
MS.gene77857	MS.gene31587	PPI
MS.gene57527	MS.gene31587	PPI
MS.gene51191	MS.gene31587	PPI
MS.gene31587	MS.gene047279	PPI
MS.gene31587	MS.gene060370	PPI
MS.gene31587	MS.gene50305	PPI
MS.gene31587	MS.gene024002	PPI
MS.gene033426	MS.gene31587	PPI
MS.gene31587	MS.gene032969	PPI
MS.gene50298	MS.gene31587	PPI
MS.gene31587	MS.gene68890	PPI
MS.gene31587	MS.gene041392	PPI
MS.gene67687	MS.gene31587	PPI
MS.gene31587	MS.gene50297	PPI
MS.gene31587	MS.gene42445	PPI
MS.gene31587	MS.gene86273	PPI
MS.gene31587	MS.gene26830	PPI
MS.gene31587	MS.gene40985	PPI
MS.gene31587	MS.gene22715	PPI
MS.gene31587	MS.gene038756	PPI
MS.gene31587	MS.gene92376	PPI
MS.gene31587	MS.gene51207	PPI
MS.gene31587	MS.gene63657	PPI
MS.gene31587	MS.gene059157	PPI
MS.gene31587	MS.gene023996	PPI
MS.gene96448	MS.gene31587	PPI
MS.gene31587	MS.gene57527	PPI
MS.gene058692	MS.gene31587	PPI
MS.gene041392	MS.gene31587	PPI
MS.gene31587	MS.gene070462	PPI
MS.gene31587	MS.gene061240	PPI
MS.gene31587	MS.gene54049	PPI
MS.gene69309	MS.gene31587	PPI
MS.gene31587	MS.gene031590	PPI
MS.gene63658	MS.gene31587	PPI
MS.gene31587	MS.gene064086	PPI
MS.gene034686	MS.gene31587	PPI
MS.gene31587	MS.gene035234	PPI
MS.gene31587	MS.gene064090	PPI
MS.gene070461	MS.gene31587	PPI
MS.gene31587	MS.gene24212	PPI
MS.gene31587	MS.gene066639	PPI
MS.gene31587	MS.gene50332	PPI
MS.gene31587	MS.gene024979	PPI
MS.gene87559	MS.gene31587	PPI
MS.gene31587	MS.gene041475	PPI
MS.gene31587	MS.gene43789	PPI
MS.gene31587	MS.gene64203	PPI
MS.gene31587	MS.gene24826	PPI
MS.gene31587	MS.gene40904	PPI
MS.gene31587	MS.gene43790	PPI
MS.gene041475	MS.gene31587	PPI
MS.gene31587	MS.gene032970	PPI
MS.gene31587	MS.gene57537	PPI
MS.gene81242	MS.gene31587	PPI
MS.gene31587	MS.gene40982	PPI
MS.gene31587	MS.gene59637	PPI
MS.gene31587	MS.gene033426	PPI
MS.gene51202	MS.gene31587	PPI
MS.gene31587	MS.gene27022	PPI
MS.gene31587	MS.gene57530	PPI
MS.gene31587	MS.gene97996	PPI
MS.gene31587	MS.gene87585	PPI
MS.gene31587	MS.gene024009	PPI
MS.gene064111	MS.gene31587	PPI
MS.gene31587	MS.gene036599	PPI
MS.gene31587	MS.gene40887	PPI
MS.gene31587	MS.gene87200	PPI
MS.gene31587	MS.gene42444	PPI
MS.gene31587	MS.gene67687	PPI
MS.gene31587	MS.gene26101	PPI
MS.gene26829	MS.gene31587	PPI
MS.gene064104	MS.gene31587	PPI
MS.gene31587	MS.gene006705	PPI
MS.gene31587	MS.gene061241	PPI
MS.gene75875	MS.gene31587	PPI
MS.gene31587	MS.gene035237	PPI
MS.gene31587	MS.gene51188	PPI
MS.gene31587	MS.gene033875	PPI
MS.gene43789	MS.gene31587	PPI
MS.gene31587	MS.gene38220	PPI
MS.gene31587	MS.gene50309	PPI
MS.gene006710	MS.gene31587	PPI
MS.gene31587	MS.gene041394	PPI
MS.gene072177	MS.gene31587	PPI
MS.gene58722	MS.gene31587	PPI
MS.gene31587	MS.gene03060	PPI
MS.gene31587	MS.gene036664	PPI
MS.gene31587	MS.gene024011	PPI
MS.gene31587	MS.gene053257	PPI
MS.gene31587	MS.gene58241	PPI
MS.gene31587	MS.gene77858	PPI
MS.gene43796	MS.gene31587	PPI
MS.gene31587	MS.gene064109	PPI
MS.gene31587	MS.gene058696	PPI
MS.gene31587	MS.gene009893	PPI
MS.gene31587	MS.gene045475	PPI
MS.gene31587	MS.gene63655	PPI
MS.gene31587	MS.gene39262	PPI
MS.gene58312	MS.gene31587	PPI
MS.gene31587	MS.gene77704	PPI
MS.gene58313	MS.gene31587	PPI
MS.gene31587	MS.gene033083	PPI
MS.gene066622	MS.gene31587	PPI
MS.gene63655	MS.gene31587	PPI
MS.gene31587	MS.gene63658	PPI
MS.gene44883	MS.gene31587	PPI
MS.gene31587	MS.gene40886	PPI
MS.gene31587	MS.gene033081	PPI
MS.gene036583	MS.gene31587	PPI
MS.gene31587	MS.gene036663	PPI
MS.gene31587	MS.gene68580	PPI
MS.gene41046	MS.gene31587	PPI
MS.gene87588	MS.gene31587	PPI
MS.gene017412	MS.gene31587	PPI
MS.gene31587	MS.gene072177	PPI
MS.gene31587	MS.gene57525	PPI
MS.gene31587	MS.gene030114	PPI
MS.gene31587	MS.gene58716	PPI
MS.gene009883	MS.gene31587	PPI
MS.gene31587	MS.gene045473	PPI
MS.gene31587	MS.gene50301	PPI
MS.gene31587	MS.gene88774	PPI
MS.gene31587	MS.gene045474	PPI
MS.gene069075	MS.gene31587	PPI
MS.gene033427	MS.gene31587	PPI
MS.gene31587	MS.gene036558	PPI
MS.gene31587	MS.gene27051	PPI
MS.gene031591	MS.gene31587	PPI
MS.gene31587	MS.gene40984	PPI
MS.gene041474	MS.gene31587	PPI
MS.gene31587	MS.gene066623	PPI
MS.gene31587	MS.gene064108	PPI
MS.gene31587	MS.gene016220	PPI
MS.gene31587	MS.gene24208	PPI
MS.gene31587	MS.gene58317	PPI
MS.gene31587	MS.gene063670	PPI
MS.gene041388	MS.gene31587	PPI
MS.gene31587	MS.gene90742	PPI
MS.gene96126	MS.gene31587	PPI
MS.gene51208	MS.gene31587	PPI
MS.gene31587	MS.gene51191	PPI
MS.gene016524	MS.gene31587	PPI
MS.gene31587	MS.gene58240	PPI
MS.gene31587	MS.gene27284	PPI
MS.gene31587	MS.gene96448	PPI
MS.gene51204	MS.gene31587	PPI
MS.gene31587	MS.gene063472	PPI
MS.gene31587	MS.gene57717	PPI
MS.gene31587	MS.gene034680	PPI
MS.gene036557	MS.gene31587	PPI
MS.gene033441	MS.gene31587	PPI
MS.gene31587	MS.gene27021	PPI
MS.gene31587	MS.gene48221	PPI
MS.gene31587	MS.gene044563	PPI
MS.gene31587	MS.gene50327	PPI
MS.gene31587	MS.gene066626	PPI
MS.gene31587	MS.gene50339	PPI
MS.gene063826	MS.gene31587	PPI
MS.gene31587	MS.gene063474	PPI
MS.gene84698	MS.gene31587	PPI
MS.gene31587	MS.gene51190	PPI
MS.gene44892	MS.gene31587	PPI
MS.gene31587	MS.gene58785	PPI
MS.gene31587	MS.gene044426	PPI
MS.gene31587	MS.gene88416	PPI
MS.gene31587	MS.gene034681	PPI
MS.gene58239	MS.gene31587	PPI
MS.gene066641	MS.gene31587	PPI
MS.gene31587	MS.gene57532	PPI
MS.gene31587	MS.gene003076	PPI
MS.gene000038	MS.gene31587	PPI
MS.gene31587	MS.gene033442	PPI
MS.gene31587	MS.gene009892	PPI
MS.gene39262	MS.gene31587	PPI
MS.gene57535	MS.gene31587	PPI
MS.gene025887	MS.gene31587	PPI
MS.gene31587	MS.gene058669	PPI
MS.gene31587	MS.gene066120	PPI
MS.gene31587	MS.gene51192	PPI
MS.gene041470	MS.gene31587	PPI
MS.gene058694	MS.gene31587	PPI
MS.gene31587	MS.gene041489	PPI
MS.gene31587	MS.gene40986	PPI
MS.gene31587	MS.gene36704	PPI
MS.gene31587	MS.gene034688	PPI
MS.gene31587	MS.gene58239	PPI
MS.gene44885	MS.gene31587	PPI
MS.gene31587	MS.gene24213	PPI
MS.gene31587	MS.gene033440	PPI
MS.gene011679	MS.gene31587	PPI
MS.gene31587	MS.gene31637	PPI
MS.gene31587	MS.gene034677	PPI
MS.gene64001	MS.gene31587	PPI
MS.gene31587	MS.gene055694	PPI
MS.gene31587	MS.gene035238	PPI
MS.gene31587	MS.gene85043	PPI
MS.gene31587	MS.gene064114	PPI
MS.gene31587	MS.gene87584	PPI
MS.gene31587	MS.gene87563	PPI
MS.gene77856	MS.gene31587	PPI
MS.gene31587	MS.gene062698	PPI
MS.gene31587	MS.gene58315	PPI
MS.gene31587	MS.gene80610	PPI
MS.gene50339	MS.gene31587	PPI
MS.gene31587	MS.gene90743	PPI
MS.gene31587	MS.gene053256	PPI
MS.gene060366	MS.gene31587	PPI
MS.gene31587	MS.gene85454	PPI
MS.gene31587	MS.gene064112	PPI
MS.gene57529	MS.gene31587	PPI
MS.gene31587	MS.gene041391	PPI
MS.gene31587	MS.gene033443	PPI
MS.gene80884	MS.gene31587	PPI
MS.gene31587	MS.gene036583	PPI
MS.gene31587	MS.gene006711	PPI
MS.gene31587	MS.gene57536	PPI
MS.gene31587	MS.gene50307	PPI
MS.gene31587	MS.gene51200	PPI
MS.gene31587	MS.gene021553	PPI
MS.gene40902	MS.gene31587	PPI
MS.gene31587	MS.gene44887	PPI
MS.gene31587	MS.gene058701	PPI
MS.gene31587	MS.gene87554	PPI
MS.gene31587	MS.gene009891	PPI
MS.gene31587	MS.gene064083	PPI
MS.gene27020	MS.gene31587	PPI
MS.gene31587	MS.gene048193	PPI
MS.gene31587	MS.gene58312	PPI
MS.gene066620	MS.gene31587	PPI
MS.gene31587	MS.gene58783	PPI
MS.gene035236	MS.gene31587	PPI
MS.gene31587	MS.gene024420	PPI
MS.gene31587	MS.gene57533	PPI
MS.gene31587	MS.gene024008	PPI
MS.gene31587	MS.gene50337	PPI
MS.gene31587	MS.gene54541	PPI
MS.gene31587	MS.gene39265	PPI
MS.gene31587	MS.gene50306	PPI
MS.gene31587	MS.gene041393	PPI
MS.gene31587	MS.gene060368	PPI
MS.gene011106	MS.gene31587	PPI
MS.gene31587	MS.gene053299	PPI
MS.gene62398	MS.gene31587	PPI
MS.gene60027	MS.gene31587	PPI
MS.gene31587	MS.gene28758	PPI
MS.gene31587	MS.gene044429	PPI
MS.gene31587	MS.gene42451	PPI
MS.gene31587	MS.gene57531	PPI
MS.gene31587	MS.gene50304	PPI
MS.gene88776	MS.gene31587	PPI
MS.gene35068	MS.gene31587	PPI
MS.gene041390	MS.gene31587	PPI
MS.gene90744	MS.gene31587	PPI
MS.gene31587	MS.gene041388	PPI
MS.gene92376	MS.gene31587	PPI
MS.gene31587	MS.gene019503	PPI
MS.gene000035	MS.gene31587	PPI
MS.gene50329	MS.gene31587	PPI
MS.gene87573	MS.gene31587	PPI
MS.gene57537	MS.gene31587	PPI
MS.gene019504	MS.gene31587	PPI
MS.gene059156	MS.gene31587	PPI
MS.gene31587	MS.gene58319	PPI
MS.gene31587	MS.gene034762	PPI
MS.gene31587	MS.gene71159	PPI
MS.gene31587	MS.gene59943	PPI
MS.gene31587	MS.gene033441	PPI
MS.gene82082	MS.gene31587	PPI
MS.gene033444	MS.gene31587	PPI
MS.gene50306	MS.gene31587	PPI
MS.gene31587	MS.gene035262	PPI
MS.gene31587	MS.gene060366	PPI
MS.gene31587	MS.gene028390	PPI
MS.gene26949	MS.gene31587	PPI
MS.gene31587	MS.gene40878	PPI
MS.gene31587	MS.gene44428	PPI
MS.gene31587	MS.gene96407	PPI
MS.gene31587	MS.gene058694	PPI
MS.gene88780	MS.gene31587	PPI
MS.gene58311	MS.gene31587	PPI
MS.gene31587	MS.gene035235	PPI
MS.gene31587	MS.gene058703	PPI
MS.gene033432	MS.gene31587	PPI
MS.gene31587	MS.gene57528	PPI
MS.gene31587	MS.gene024000	PPI
MS.gene31587	MS.gene012215	PPI
MS.gene59639	MS.gene31587	PPI
MS.gene31587	MS.gene033079	PPI
MS.gene066635	MS.gene31587	PPI
MS.gene31587	MS.gene059101	PPI
MS.gene31587	MS.gene033444	PPI
MS.gene31587	MS.gene58316	PPI
MS.gene010758	MS.gene31587	PPI
MS.gene31587	MS.gene033430	PPI
MS.gene87586	MS.gene31587	PPI
MS.gene31587	MS.gene58321	PPI
MS.gene019506	MS.gene31587	PPI
MS.gene31587	MS.gene87564	PPI
MS.gene31587	MS.gene36595	PPI
MS.gene50326	MS.gene31587	PPI
MS.gene31587	MS.gene024004	PPI
MS.gene31587	MS.gene045140	PPI
MS.gene31587	MS.gene041473	PPI
MS.gene31587	MS.gene50311	PPI
MS.gene31587	MS.gene88780	PPI
MS.gene31587	MS.gene058989	PPI
MS.gene31587	MS.gene036556	PPI
MS.gene42452	MS.gene31587	PPI
MS.gene31587	MS.gene57538	PPI
MS.gene31587	MS.gene041468	PPI
MS.gene31587	MS.gene060367	PPI
MS.gene31587	MS.gene058693	PPI
MS.gene063414	MS.gene31587	PPI
MS.gene31587	MS.gene27319	PPI
MS.gene31587	MS.gene64001	PPI
MS.gene31587	MS.gene015089	PPI
MS.gene31587	MS.gene041395	PPI
MS.gene31587	MS.gene42447	PPI
MS.gene31587	MS.gene51189	PPI
MS.gene87563	MS.gene31587	PPI
MS.gene31587	MS.gene046958	PPI
MS.gene31587	MS.gene24286	PPI
MS.gene31587	MS.gene066635	PPI
MS.gene31587	MS.gene044425	PPI
MS.gene051820	MS.gene31587	PPI
MS.gene26957	MS.gene31587	PPI
MS.gene036582	MS.gene31587	PPI
MS.gene58320	MS.gene31587	PPI
MS.gene27283	MS.gene31587	PPI
MS.gene31587	MS.gene40988	PPI
MS.gene87200	MS.gene31587	PPI
MS.gene31587	MS.gene24173	PPI
MS.gene31587	MS.gene036584	PPI
MS.gene31587	MS.gene036662	PPI
MS.gene58781	MS.gene31587	PPI
MS.gene31587	MS.gene88776	PPI
MS.gene44886	MS.gene31587	PPI
MS.gene87562	MS.gene31587	PPI
MS.gene40904	MS.gene31587	PPI
MS.gene31587	MS.gene035261	PPI
MS.gene31587	MS.gene023999	PPI
MS.gene31587	MS.gene69307	PPI
MS.gene87569	MS.gene31587	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31587.t1	MTR_1g009110	88.927	289	32	0	19	307	91	379	0.0	548
MS.gene31587.t1	MTR_1g022105	59.630	270	59	6	19	286	99	320	1.51e-99	295
MS.gene31587.t1	MTR_1g023400	45.130	308	143	10	7	306	63	352	1.07e-72	228
MS.gene31587.t1	MTR_1g022200	45.329	289	136	11	32	307	91	370	3.63e-63	204
MS.gene31587.t1	MTR_4g080200	44.406	286	143	10	28	306	73	349	5.06e-63	203
MS.gene31587.t1	MTR_1g037540	39.865	296	153	12	28	306	113	400	1.97e-52	177
MS.gene31587.t1	MTR_1g023430	50.746	134	65	1	174	307	41	173	7.19e-39	135
MS.gene31587.t1	MTR_1g024125	52.727	110	48	2	178	283	38	147	2.96e-32	117
MS.gene31587.t1	MTR_1g008000	32.014	278	129	15	41	307	41	269	3.23e-18	83.2
MS.gene31587.t1	MTR_8g046310	27.542	236	136	12	64	279	140	360	2.36e-12	67.4
MS.gene31587.t1	MTR_0064s0160	24.719	267	165	12	40	284	148	400	3.02e-11	64.3
MS.gene31587.t1	MTR_4g028510	23.704	270	170	10	2	244	80	340	6.68e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 79 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCTTGGTCACTTGATTCTA+TGG	0.211950	1.1:-10578510	MS.gene31587:CDS
GGGCTCCCTTGCTTATGTTT+TGG	0.242082	1.1:-10578062	MS.gene31587:CDS
CGAATTTCAAACTTATGTTT+TGG	0.285058	1.1:-10577846	MS.gene31587:CDS
AATGTTACAGTCGTCGTTAA+AGG	0.311664	1.1:+10578399	None:intergenic
AAGGATGGCGATCAAGTCTT+TGG	0.320162	1.1:-10577923	MS.gene31587:CDS
CGAACTGGGATGCGGTTAAA+AGG	0.324187	1.1:+10578259	None:intergenic
GTCCGACCCAGTTGGAAATC+TGG	0.346576	1.1:-10578024	MS.gene31587:CDS
AGTGGACTTGTTTAGTTGTT+GGG	0.389103	1.1:+10578485	None:intergenic
AAAGGTGGAGGGTGATGTAC+AGG	0.389477	1.1:+10578277	None:intergenic
TATGATGGATTGTATCGAAC+TGG	0.389997	1.1:+10578244	None:intergenic
TTGTTAACTGCGTTTATCAT+TGG	0.393265	1.1:-10578213	MS.gene31587:CDS
GAGAAGATGATTATTTCTTC+AGG	0.395114	1.1:-10578337	MS.gene31587:CDS
CCAGTTGGAAATCTGGATTA+TGG	0.400362	1.1:-10578017	MS.gene31587:CDS
AAATACGATGATTCCCTGTA+TGG	0.405996	1.1:-10578430	MS.gene31587:CDS
AGAATGTTTAACATGCAAAC+AGG	0.409138	1.1:+10578108	None:intergenic
TGATAAACGCAGTTAACAAC+CGG	0.421312	1.1:+10578217	None:intergenic
CTAGGTTGACAAGGGAGTTA+TGG	0.432273	1.1:+10577784	None:intergenic
AAGTGGACTTGTTTAGTTGT+TGG	0.433206	1.1:+10578484	None:intergenic
AAGTCAAAGCAGATGATGTT+TGG	0.437710	1.1:+10578163	None:intergenic
CGAAAACATCGCTGAGATCA+AGG	0.445708	1.1:-10578083	MS.gene31587:CDS
CGGTCTACGGATTGATTAGC+TGG	0.445840	1.1:+10578595	None:intergenic
CAAGTCTTTGGAGGAAAGGT+TGG	0.455199	1.1:-10577911	MS.gene31587:CDS
ATTTCCAACTGGGTCGGACT+AGG	0.460982	1.1:+10578028	None:intergenic
CCATAATCCAGATTTCCAAC+TGG	0.464959	1.1:+10578017	None:intergenic
TCGGTCCTCGCCACCGTCGC+AGG	0.468773	1.1:+10578652	None:intergenic
GCAGGAGAGAAGAGTGATGT+AGG	0.469702	1.1:+10578670	None:intergenic
ATATGATTCGACTCGGTCTA+CGG	0.477983	1.1:+10578582	None:intergenic
ATGCAACAAGTCCACGGAAC+TGG	0.481178	1.1:+10577959	None:intergenic
GGTGGCGAGGACCGAGGAGT+TGG	0.482604	1.1:-10578644	MS.gene31587:CDS
AGGAAAGGTTGGACAACTGC+TGG	0.494743	1.1:-10577900	MS.gene31587:CDS
CGGATTGATTAGCTGGAAAG+AGG	0.525041	1.1:+10578602	None:intergenic
GTAGACCGAGTCGAATCATA+TGG	0.525200	1.1:-10578580	MS.gene31587:CDS
TCTCTCCTGCGACGGTGGCG+AGG	0.528113	1.1:-10578657	MS.gene31587:CDS
TAAAGGCACAGAAACCATAC+AGG	0.529590	1.1:+10578416	None:intergenic
TTAACAACCGGGGTATATGA+TGG	0.531903	1.1:+10578229	None:intergenic
ACTCTTCTCTCCTGCGACGG+TGG	0.534629	1.1:-10578662	MS.gene31587:CDS
CTGGCTTTATATGAAGATCA+AGG	0.535518	1.1:-10577881	MS.gene31587:CDS
CGATCAAGTCTTTGGAGGAA+AGG	0.536754	1.1:-10577915	MS.gene31587:CDS
CATAATCCAGATTTCCAACT+GGG	0.537214	1.1:+10578018	None:intergenic
TGCCGTGAGCTAGGTTGACA+AGG	0.540643	1.1:+10577775	None:intergenic
ACGATCTAAGCACTAAATCA+TGG	0.541598	1.1:-10578303	MS.gene31587:CDS
GAGTCACAAAATGAGGGTGC+AGG	0.546607	1.1:+10578454	None:intergenic
CAGGAGAGAAGAGTGATGTA+GGG	0.550066	1.1:+10578671	None:intergenic
GCAAACAGGGAGCTTTGAGT+TGG	0.555369	1.1:+10578122	None:intergenic
GTCGATGCGTTCCAACTCCT+CGG	0.558741	1.1:+10578633	None:intergenic
GAGAGAAGAGTGATGTAGGG+AGG	0.559362	1.1:+10578674	None:intergenic
ATCACTCTTCTCTCCTGCGA+CGG	0.566825	1.1:-10578665	MS.gene31587:CDS
GATGGCGATCAAGTCTTTGG+AGG	0.568823	1.1:-10577920	MS.gene31587:CDS
GTATTTAGAGTCACAAAATG+AGG	0.569672	1.1:+10578447	None:intergenic
TCATCCTAGTCCGACCCAGT+TGG	0.573989	1.1:-10578032	MS.gene31587:CDS
GATACTCCAAAACATAAGCA+AGG	0.575880	1.1:+10578056	None:intergenic
GAAAACATCGCTGAGATCAA+GGG	0.583406	1.1:-10578082	MS.gene31587:CDS
GATTGTATCGAACTGGGATG+CGG	0.586322	1.1:+10578251	None:intergenic
GGGATGCGGTTAAAAGGTGG+AGG	0.586358	1.1:+10578265	None:intergenic
GAATCATATGGCAATTGCAA+TGG	0.596106	1.1:-10578568	MS.gene31587:CDS
AGGGTGCAGGAGGTATAAAG+TGG	0.598291	1.1:+10578467	None:intergenic
GGATTGATTAGCTGGAAAGA+GGG	0.601844	1.1:+10578603	None:intergenic
ATCCAGATTTCCAACTGGGT+CGG	0.606074	1.1:+10578022	None:intergenic
ACTGGGATGCGGTTAAAAGG+TGG	0.613040	1.1:+10578262	None:intergenic
AAGGTGGAGGGTGATGTACA+GGG	0.620919	1.1:+10578278	None:intergenic
TGCGACGGTGGCGAGGACCG+AGG	0.624717	1.1:-10578650	MS.gene31587:CDS
TCACAAAATGAGGGTGCAGG+AGG	0.625154	1.1:+10578457	None:intergenic
TCACGTATGCAACAAGTCCA+CGG	0.629328	1.1:+10577953	None:intergenic
AATTGCCATATGATTCGACT+CGG	0.634347	1.1:+10578575	None:intergenic
GTTGACAAGGGAGTTATGGT+CGG	0.638109	1.1:+10577788	None:intergenic
ATACTCCAAAACATAAGCAA+GGG	0.638978	1.1:+10578057	None:intergenic
TATTTAGAGTCACAAAATGA+GGG	0.639125	1.1:+10578448	None:intergenic
TGGAGCAGTATGCAAATCGA+CGG	0.645552	1.1:+10578183	None:intergenic
AGGTGGAGGGTGATGTACAG+GGG	0.646713	1.1:+10578279	None:intergenic
GAATGTTTAACATGCAAACA+GGG	0.653364	1.1:+10578109	None:intergenic
ACAACATTGGACCAGTTCCG+TGG	0.656417	1.1:-10577970	MS.gene31587:CDS
GATAAACGCAGTTAACAACC+GGG	0.662346	1.1:+10578218	None:intergenic
GGATTATGGATCAAAGCCAG+TGG	0.676890	1.1:-10578003	MS.gene31587:CDS
GGATGCGGTTAAAAGGTGGA+GGG	0.677010	1.1:+10578266	None:intergenic
ATACAATCCATCATATACCC+CGG	0.677642	1.1:-10578236	MS.gene31587:CDS
GCCGTGAGCTAGGTTGACAA+GGG	0.678977	1.1:+10577776	None:intergenic
ATGATGGATTGTATCGAACT+GGG	0.683119	1.1:+10578245	None:intergenic
AAAGGCACAGAAACCATACA+GGG	0.735683	1.1:+10578417	None:intergenic
ATAAACGCAGTTAACAACCG+GGG	0.757950	1.1:+10578219	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GATTATTTTAGATGTTTATG+GGG	-	chr1.1:10578645-10578664	MS.gene31587:CDS	20.0%
!!!	GGATTATTTTAGATGTTTAT+GGG	-	chr1.1:10578644-10578663	MS.gene31587:CDS	20.0%
!!!	TCTTCTTAAAAGCTTTTTAT+AGG	-	chr1.1:10577929-10577948	MS.gene31587:CDS	20.0%
!!!	TGGATTATTTTAGATGTTTA+TGG	-	chr1.1:10578643-10578662	MS.gene31587:CDS	20.0%
!!	CGAATTTCAAACTTATGTTT+TGG	-	chr1.1:10578623-10578642	MS.gene31587:CDS	25.0%
!!	TATTTAGAGTCACAAAATGA+GGG	+	chr1.1:10578024-10578043	None:intergenic	25.0%
!!	TTTTATAGGAATTCAACTCT+TGG	-	chr1.1:10577943-10577962	MS.gene31587:CDS	25.0%
	AGAATGTTTAACATGCAAAC+AGG	+	chr1.1:10578364-10578383	None:intergenic	30.0%
	ATACTCCAAAACATAAGCAA+GGG	+	chr1.1:10578415-10578434	None:intergenic	30.0%
	GAATGTTTAACATGCAAACA+GGG	+	chr1.1:10578363-10578382	None:intergenic	30.0%
	TTGTTAACTGCGTTTATCAT+TGG	-	chr1.1:10578256-10578275	MS.gene31587:CDS	30.0%
!	GAGAAGATGATTATTTCTTC+AGG	-	chr1.1:10578132-10578151	MS.gene31587:CDS	30.0%
!	GTATTTAGAGTCACAAAATG+AGG	+	chr1.1:10578025-10578044	None:intergenic	30.0%
	AAATACGATGATTCCCTGTA+TGG	-	chr1.1:10578039-10578058	MS.gene31587:CDS	35.0%
	AAGTCAAAGCAGATGATGTT+TGG	+	chr1.1:10578309-10578328	None:intergenic	35.0%
	AATGTTACAGTCGTCGTTAA+AGG	+	chr1.1:10578073-10578092	None:intergenic	35.0%
	AATTGCCATATGATTCGACT+CGG	+	chr1.1:10577897-10577916	None:intergenic	35.0%
	ACGATCTAAGCACTAAATCA+TGG	-	chr1.1:10578166-10578185	MS.gene31587:CDS	35.0%
	ATACAATCCATCATATACCC+CGG	-	chr1.1:10578233-10578252	MS.gene31587:CDS	35.0%
	CATAATCCAGATTTCCAACT+GGG	+	chr1.1:10578454-10578473	None:intergenic	35.0%
	GAATCATATGGCAATTGCAA+TGG	-	chr1.1:10577901-10577920	MS.gene31587:CDS	35.0%
	GATACTCCAAAACATAAGCA+AGG	+	chr1.1:10578416-10578435	None:intergenic	35.0%
	TGATAAACGCAGTTAACAAC+CGG	+	chr1.1:10578255-10578274	None:intergenic	35.0%
!	AAGTGGACTTGTTTAGTTGT+TGG	+	chr1.1:10577988-10578007	None:intergenic	35.0%
!	AGTGGACTTGTTTAGTTGTT+GGG	+	chr1.1:10577987-10578006	None:intergenic	35.0%
!	CTTGTTGCATACGTGATTTT+TGG	-	chr1.1:10578523-10578542	MS.gene31587:CDS	35.0%
!	TGGACCAAAAAGTACAACAT+TGG	-	chr1.1:10578486-10578505	MS.gene31587:CDS	35.0%
!	TGGTCCAATGTTGTACTTTT+TGG	+	chr1.1:10578493-10578512	None:intergenic	35.0%
!!	ATACGTGATTTTTGGAAGGA+TGG	-	chr1.1:10578531-10578550	MS.gene31587:CDS	35.0%
!!	ATGATGGATTGTATCGAACT+GGG	+	chr1.1:10578227-10578246	None:intergenic	35.0%
!!	CTGGCTTTATATGAAGATCA+AGG	-	chr1.1:10578588-10578607	MS.gene31587:CDS	35.0%
!!	TATGATGGATTGTATCGAAC+TGG	+	chr1.1:10578228-10578247	None:intergenic	35.0%
!!	TTGCATACGTGATTTTTGGA+AGG	-	chr1.1:10578527-10578546	MS.gene31587:CDS	35.0%
	ATAAACGCAGTTAACAACCG+GGG	+	chr1.1:10578253-10578272	None:intergenic	40.0%
	CCAGTTGGAAATCTGGATTA+TGG	-	chr1.1:10578452-10578471	MS.gene31587:CDS	40.0%
	CCATAATCCAGATTTCCAAC+TGG	+	chr1.1:10578455-10578474	None:intergenic	40.0%
	CTCTTGGTCACTTGATTCTA+TGG	-	chr1.1:10577959-10577978	MS.gene31587:CDS	40.0%
	GAAAACATCGCTGAGATCAA+GGG	-	chr1.1:10578387-10578406	MS.gene31587:CDS	40.0%
	GATAAACGCAGTTAACAACC+GGG	+	chr1.1:10578254-10578273	None:intergenic	40.0%
	TTAACAACCGGGGTATATGA+TGG	+	chr1.1:10578243-10578262	None:intergenic	40.0%
!	AAAGGCACAGAAACCATACA+GGG	+	chr1.1:10578055-10578074	None:intergenic	40.0%
!	GGATTGATTAGCTGGAAAGA+GGG	+	chr1.1:10577869-10577888	None:intergenic	40.0%
!	TAAAGGCACAGAAACCATAC+AGG	+	chr1.1:10578056-10578075	None:intergenic	40.0%
!!	ATATGATTCGACTCGGTCTA+CGG	+	chr1.1:10577890-10577909	None:intergenic	40.0%
!!	TGTTGTACTTTTTGGTCCAC+TGG	+	chr1.1:10578485-10578504	None:intergenic	40.0%
	AAGGATGGCGATCAAGTCTT+TGG	-	chr1.1:10578546-10578565	MS.gene31587:CDS	45.0%
	ATCCAGATTTCCAACTGGGT+CGG	+	chr1.1:10578450-10578469	None:intergenic	45.0%
	CAGGAGAGAAGAGTGATGTA+GGG	+	chr1.1:10577801-10577820	None:intergenic	45.0%
	CGAAAACATCGCTGAGATCA+AGG	-	chr1.1:10578386-10578405	MS.gene31587:CDS	45.0%
	GATTGTATCGAACTGGGATG+CGG	+	chr1.1:10578221-10578240	None:intergenic	45.0%
	GGATTATGGATCAAAGCCAG+TGG	-	chr1.1:10578466-10578485	MS.gene31587:CDS	45.0%
	GTAGACCGAGTCGAATCATA+TGG	-	chr1.1:10577889-10577908	MS.gene31587:CDS	45.0%
	GTTGACAAGGGAGTTATGGT+CGG	+	chr1.1:10578684-10578703	None:intergenic	45.0%
	TCACGTATGCAACAAGTCCA+CGG	+	chr1.1:10578519-10578538	None:intergenic	45.0%
	TGGAGCAGTATGCAAATCGA+CGG	+	chr1.1:10578289-10578308	None:intergenic	45.0%
!	CAAGTCTTTGGAGGAAAGGT+TGG	-	chr1.1:10578558-10578577	MS.gene31587:CDS	45.0%
!	CGATCAAGTCTTTGGAGGAA+AGG	-	chr1.1:10578554-10578573	MS.gene31587:CDS	45.0%
!	CGGATTGATTAGCTGGAAAG+AGG	+	chr1.1:10577870-10577889	None:intergenic	45.0%
!	CTAGGTTGACAAGGGAGTTA+TGG	+	chr1.1:10578688-10578707	None:intergenic	45.0%
	AAAGGTGGAGGGTGATGTAC+AGG	+	chr1.1:10578195-10578214	None:intergenic	50.0%
	AAGGTGGAGGGTGATGTACA+GGG	+	chr1.1:10578194-10578213	None:intergenic	50.0%
	ACAACATTGGACCAGTTCCG+TGG	-	chr1.1:10578499-10578518	MS.gene31587:CDS	50.0%
	ACTGGGATGCGGTTAAAAGG+TGG	+	chr1.1:10578210-10578229	None:intergenic	50.0%
	AGGAAAGGTTGGACAACTGC+TGG	-	chr1.1:10578569-10578588	MS.gene31587:CDS	50.0%
	ATCACTCTTCTCTCCTGCGA+CGG	-	chr1.1:10577804-10577823	MS.gene31587:CDS	50.0%
	ATGCAACAAGTCCACGGAAC+TGG	+	chr1.1:10578513-10578532	None:intergenic	50.0%
	ATTTCCAACTGGGTCGGACT+AGG	+	chr1.1:10578444-10578463	None:intergenic	50.0%
	CGAACTGGGATGCGGTTAAA+AGG	+	chr1.1:10578213-10578232	None:intergenic	50.0%
	GAGAGAAGAGTGATGTAGGG+AGG	+	chr1.1:10577798-10577817	None:intergenic	50.0%
	GATGGCGATCAAGTCTTTGG+AGG	-	chr1.1:10578549-10578568	MS.gene31587:CDS	50.0%
	GCAGGAGAGAAGAGTGATGT+AGG	+	chr1.1:10577802-10577821	None:intergenic	50.0%
	GGATGCGGTTAAAAGGTGGA+GGG	+	chr1.1:10578206-10578225	None:intergenic	50.0%
!	AGGGTGCAGGAGGTATAAAG+TGG	+	chr1.1:10578005-10578024	None:intergenic	50.0%
!	CGGTCTACGGATTGATTAGC+TGG	+	chr1.1:10577877-10577896	None:intergenic	50.0%
!	GAGTCACAAAATGAGGGTGC+AGG	+	chr1.1:10578018-10578037	None:intergenic	50.0%
!	GGGCTCCCTTGCTTATGTTT+TGG	-	chr1.1:10578407-10578426	MS.gene31587:CDS	50.0%
!	TCACAAAATGAGGGTGCAGG+AGG	+	chr1.1:10578015-10578034	None:intergenic	50.0%
!!	GCAAACAGGGAGCTTTGAGT+TGG	+	chr1.1:10578350-10578369	None:intergenic	50.0%
	AGGTGGAGGGTGATGTACAG+GGG	+	chr1.1:10578193-10578212	None:intergenic	55.0%
	GGGATGCGGTTAAAAGGTGG+AGG	+	chr1.1:10578207-10578226	None:intergenic	55.0%
	GTCCGACCCAGTTGGAAATC+TGG	-	chr1.1:10578445-10578464	MS.gene31587:CDS	55.0%
	GTCGATGCGTTCCAACTCCT+CGG	+	chr1.1:10577839-10577858	None:intergenic	55.0%
	TCATCCTAGTCCGACCCAGT+TGG	-	chr1.1:10578437-10578456	MS.gene31587:CDS	55.0%
	ACTCTTCTCTCCTGCGACGG+TGG	-	chr1.1:10577807-10577826	MS.gene31587:CDS	60.0%
	GGTGGCGAGGACCGAGGAGT+TGG	-	chr1.1:10577825-10577844	MS.gene31587:CDS	70.0%
	TCTCTCCTGCGACGGTGGCG+AGG	-	chr1.1:10577812-10577831	MS.gene31587:CDS	70.0%
	TCGGTCCTCGCCACCGTCGC+AGG	+	chr1.1:10577820-10577839	None:intergenic	75.0%
	TGCGACGGTGGCGAGGACCG+AGG	-	chr1.1:10577819-10577838	MS.gene31587:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	10577784	10578707	10577784	ID=MS.gene31587
chr1.1	mRNA	10577784	10578707	10577784	ID=MS.gene31587.t1;Parent=MS.gene31587
chr1.1	exon	10577784	10578707	10577784	ID=MS.gene31587.t1.exon1;Parent=MS.gene31587.t1
chr1.1	CDS	10577784	10578707	10577784	ID=cds.MS.gene31587.t1;Parent=MS.gene31587.t1

Gene Sequence

>MS.gene31587

ATGGATTCAAACCTCCCTACATCACTCTTCTCTCCTGCGACGGTGGCGAGGACCGAGGAGTTGGAACGCATCGACTTCTGCTCCCTCTTTCCAGCTAATCAATCCGTAGACCGAGTCGAATCATATGGCAATTGCAATGGTGTTTTCTTCTTAAAAGCTTTTTATAGGAATTCAACTCTTGGTCACTTGATTCTATGGAACCCAACAACTAAACAAGTCCACTTTATACCTCCTGCACCCTCATTTTGTGACTCTAAATACGATGATTCCCTGTATGGTTTCTGTGCCTTTAACGACGACTGTAACATTAATTTCAAAGTTGTTAGACTTCAACAATGTGCACATGTTGAGAAGATGATTATTTCTTCAGGCGCAGAAGTGTACGATCTAAGCACTAAATCATGGACCCCTGTACATCACCCTCCACCTTTTAACCGCATCCCAGTTCGATACAATCCATCATATACCCCGGTTGTTAACTGCGTTTATCATTGGACTGTTACCGTCGATTTGCATACTGCTCCAAACATCATCTGCTTTGACTTTCACAACAATCAGTTTCACCAACTCAAAGCTCCCTGTTTGCATGTTAAACATTCTAGCGAAAACATCGCTGAGATCAAGGGCTCCCTTGCTTATGTTTTGGAGTATCATCATCCTAGTCCGACCCAGTTGGAAATCTGGATTATGGATCAAAGCCAGTGGACCAAAAAGTACAACATTGGACCAGTTCCGTGGACTTGTTGCATACGTGATTTTTGGAAGGATGGCGATCAAGTCTTTGGAGGAAAGGTTGGACAACTGCTGGCTTTATATGAAGATCAAGGCAACTCTCTTAGCGAATTTCAAACTTATGTTTTGGATTATTTTAGATGTTTATGGGGTTCTGAGTATTTGCCGACCATAACTCCCTTGTCAACCTAG

Protein sequence

>MS.gene31587.t1

MDSNLPTSLFSPATVARTEELERIDFCSLFPANQSVDRVESYGNCNGVFFLKAFYRNSTLGHLILWNPTTKQVHFIPPAPSFCDSKYDDSLYGFCAFNDDCNINFKVVRLQQCAHVEKMIISSGAEVYDLSTKSWTPVHHPPPFNRIPVRYNPSYTPVVNCVYHWTVTVDLHTAPNIICFDFHNNQFHQLKAPCLHVKHSSENIAEIKGSLAYVLEYHHPSPTQLEIWIMDQSQWTKKYNIGPVPWTCCIRDFWKDGDQVFGGKVGQLLALYEDQGNSLSEFQTYVLDYFRCLWGSEYLPTITPLST