AlfalfaGEDB | MS.gene77857

M. sativa cultivar XinJiangDaYe / MS.gene77857

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77857.t1	XP_003599498.1	90.4	312	29	1	1	312	64	374	9.90E-168	599.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77857.t1	Q9SU30	28.7	216	139	7	40	242	90	303	2.0e-15	84.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77857.t1	G7IX78	90.4	312	29	1	1	312	64	374	7.1e-168	599.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene77857	MS.gene045474	PPI
MS.gene77857	MS.gene036558	PPI
MS.gene041388	MS.gene77857	PPI
MS.gene77857	MS.gene40984	PPI
MS.gene77857	MS.gene066623	PPI
MS.gene77857	MS.gene064108	PPI
MS.gene96126	MS.gene77857	PPI
MS.gene016524	MS.gene77857	PPI
MS.gene77857	MS.gene80610	PPI
MS.gene77857	MS.gene24208	PPI
MS.gene77857	MS.gene58317	PPI
MS.gene77857	MS.gene90742	PPI
MS.gene77857	MS.gene24212	PPI
MS.gene77857	MS.gene51191	PPI
MS.gene31587	MS.gene77857	PPI
MS.gene036557	MS.gene77857	PPI
MS.gene033441	MS.gene77857	PPI
MS.gene77857	MS.gene58240	PPI
MS.gene77857	MS.gene27284	PPI
MS.gene77857	MS.gene96448	PPI
MS.gene77857	MS.gene063472	PPI
MS.gene77857	MS.gene57717	PPI
MS.gene77857	MS.gene034680	PPI
MS.gene77857	MS.gene31587	PPI
MS.gene063826	MS.gene77857	PPI
MS.gene77857	MS.gene27021	PPI
MS.gene84698	MS.gene77857	PPI
MS.gene77857	MS.gene044563	PPI
MS.gene44892	MS.gene77857	PPI
MS.gene77857	MS.gene50327	PPI
MS.gene77857	MS.gene066626	PPI
MS.gene77857	MS.gene40982	PPI
MS.gene77857	MS.gene50339	PPI
MS.gene58239	MS.gene77857	PPI
MS.gene066641	MS.gene77857	PPI
MS.gene77857	MS.gene063474	PPI
MS.gene77857	MS.gene51190	PPI
MS.gene000038	MS.gene77857	PPI
MS.gene77857	MS.gene58785	PPI
MS.gene77857	MS.gene044426	PPI
MS.gene77857	MS.gene88416	PPI
MS.gene77857	MS.gene034681	PPI
MS.gene39262	MS.gene77857	PPI
MS.gene77857	MS.gene57532	PPI
MS.gene77857	MS.gene003076	PPI
MS.gene57535	MS.gene77857	PPI
MS.gene025887	MS.gene77857	PPI
MS.gene041470	MS.gene77857	PPI
MS.gene058694	MS.gene77857	PPI
MS.gene77857	MS.gene009892	PPI
MS.gene77857	MS.gene058669	PPI
MS.gene77857	MS.gene066120	PPI
MS.gene77857	MS.gene51192	PPI
MS.gene006710	MS.gene77857	PPI
MS.gene77857	MS.gene033875	PPI
MS.gene44885	MS.gene77857	PPI
MS.gene011679	MS.gene77857	PPI
MS.gene77857	MS.gene041489	PPI
MS.gene77857	MS.gene38220	PPI
MS.gene77857	MS.gene40986	PPI
MS.gene64001	MS.gene77857	PPI
MS.gene77857	MS.gene36704	PPI
MS.gene77857	MS.gene034688	PPI
MS.gene77857	MS.gene58239	PPI
MS.gene77857	MS.gene24213	PPI
MS.gene77857	MS.gene033440	PPI
MS.gene77857	MS.gene034677	PPI
MS.gene77857	MS.gene055694	PPI
MS.gene77856	MS.gene77857	PPI
MS.gene77857	MS.gene035238	PPI
MS.gene77857	MS.gene85043	PPI
MS.gene77857	MS.gene064114	PPI
MS.gene77857	MS.gene87584	PPI
MS.gene77857	MS.gene87563	PPI
MS.gene77857	MS.gene062698	PPI
MS.gene060366	MS.gene77857	PPI
MS.gene77857	MS.gene90743	PPI
MS.gene77857	MS.gene053256	PPI
MS.gene57529	MS.gene77857	PPI
MS.gene80884	MS.gene77857	PPI
MS.gene77857	MS.gene85454	PPI
MS.gene77857	MS.gene041391	PPI
MS.gene77857	MS.gene033443	PPI
MS.gene40902	MS.gene77857	PPI
MS.gene77857	MS.gene036583	PPI
MS.gene77857	MS.gene006711	PPI
MS.gene033427	MS.gene77857	PPI
MS.gene77857	MS.gene57536	PPI
MS.gene77857	MS.gene50307	PPI
MS.gene77857	MS.gene51200	PPI
MS.gene77857	MS.gene021553	PPI
MS.gene041474	MS.gene77857	PPI
MS.gene27020	MS.gene77857	PPI
MS.gene77857	MS.gene44887	PPI
MS.gene77857	MS.gene058701	PPI
MS.gene066620	MS.gene77857	PPI
MS.gene035236	MS.gene77857	PPI
MS.gene77857	MS.gene87554	PPI
MS.gene77857	MS.gene009891	PPI
MS.gene77857	MS.gene064083	PPI
MS.gene77857	MS.gene27051	PPI
MS.gene77857	MS.gene048193	PPI
MS.gene77857	MS.gene58312	PPI
MS.gene51208	MS.gene77857	PPI
MS.gene77857	MS.gene58783	PPI
MS.gene77857	MS.gene024420	PPI
MS.gene011106	MS.gene77857	PPI
MS.gene77857	MS.gene016220	PPI
MS.gene77857	MS.gene57533	PPI
MS.gene62398	MS.gene77857	PPI
MS.gene77857	MS.gene024008	PPI
MS.gene77857	MS.gene50337	PPI
MS.gene60027	MS.gene77857	PPI
MS.gene77857	MS.gene063670	PPI
MS.gene77857	MS.gene54541	PPI
MS.gene77857	MS.gene39265	PPI
MS.gene77857	MS.gene50306	PPI
MS.gene77857	MS.gene041393	PPI
MS.gene88776	MS.gene77857	PPI
MS.gene77857	MS.gene060368	PPI
MS.gene35068	MS.gene77857	PPI
MS.gene041390	MS.gene77857	PPI
MS.gene77857	MS.gene053299	PPI
MS.gene90744	MS.gene77857	PPI
MS.gene51204	MS.gene77857	PPI
MS.gene92376	MS.gene77857	PPI
MS.gene77857	MS.gene28758	PPI
MS.gene77857	MS.gene044429	PPI
MS.gene000035	MS.gene77857	PPI
MS.gene50329	MS.gene77857	PPI
MS.gene77857	MS.gene57531	PPI
MS.gene77857	MS.gene50304	PPI
MS.gene87573	MS.gene77857	PPI
MS.gene77857	MS.gene041388	PPI
MS.gene77857	MS.gene019503	PPI
MS.gene57537	MS.gene77857	PPI
MS.gene019504	MS.gene77857	PPI
MS.gene059156	MS.gene77857	PPI
MS.gene77857	MS.gene48221	PPI
MS.gene82082	MS.gene77857	PPI
MS.gene033444	MS.gene77857	PPI
MS.gene50306	MS.gene77857	PPI
MS.gene77857	MS.gene58319	PPI
MS.gene77857	MS.gene034762	PPI
MS.gene77857	MS.gene71159	PPI
MS.gene77857	MS.gene59943	PPI
MS.gene77857	MS.gene033441	PPI
MS.gene77857	MS.gene033442	PPI
MS.gene87200	MS.gene77857	PPI
MS.gene58311	MS.gene77857	PPI
MS.gene77857	MS.gene060366	PPI
MS.gene77857	MS.gene40878	PPI
MS.gene033432	MS.gene77857	PPI
MS.gene77857	MS.gene44428	PPI
MS.gene77857	MS.gene96407	PPI
MS.gene77857	MS.gene058694	PPI
MS.gene77857	MS.gene035235	PPI
MS.gene59639	MS.gene77857	PPI
MS.gene77857	MS.gene058703	PPI
MS.gene77857	MS.gene57528	PPI
MS.gene066635	MS.gene77857	PPI
MS.gene77857	MS.gene024000	PPI
MS.gene77857	MS.gene012215	PPI
MS.gene010758	MS.gene77857	PPI
MS.gene77857	MS.gene033079	PPI
MS.gene87586	MS.gene77857	PPI
MS.gene77857	MS.gene059101	PPI
MS.gene50326	MS.gene77857	PPI
MS.gene77857	MS.gene033444	PPI
MS.gene77857	MS.gene58316	PPI
MS.gene77857	MS.gene033430	PPI
MS.gene50339	MS.gene77857	PPI
MS.gene77857	MS.gene58321	PPI
MS.gene77857	MS.gene87564	PPI
MS.gene77857	MS.gene58315	PPI
MS.gene77857	MS.gene36595	PPI
MS.gene77857	MS.gene63658	PPI
MS.gene77857	MS.gene045140	PPI
MS.gene42452	MS.gene77857	PPI
MS.gene77857	MS.gene041473	PPI
MS.gene063414	MS.gene77857	PPI
MS.gene77857	MS.gene50311	PPI
MS.gene77857	MS.gene88780	PPI
MS.gene77857	MS.gene064112	PPI
MS.gene77857	MS.gene058989	PPI
MS.gene77857	MS.gene036556	PPI
MS.gene77857	MS.gene57538	PPI
MS.gene77857	MS.gene041468	PPI
MS.gene77857	MS.gene060367	PPI
MS.gene77857	MS.gene058693	PPI
MS.gene77857	MS.gene27319	PPI
MS.gene87563	MS.gene77857	PPI
MS.gene77857	MS.gene64001	PPI
MS.gene77857	MS.gene015089	PPI
MS.gene77857	MS.gene041395	PPI
MS.gene77857	MS.gene51189	PPI
MS.gene051820	MS.gene77857	PPI
MS.gene26957	MS.gene77857	PPI
MS.gene97996	MS.gene77857	PPI
MS.gene036582	MS.gene77857	PPI
MS.gene77857	MS.gene046958	PPI
MS.gene58320	MS.gene77857	PPI
MS.gene27283	MS.gene77857	PPI
MS.gene77857	MS.gene24286	PPI
MS.gene77857	MS.gene066635	PPI
MS.gene58781	MS.gene77857	PPI
MS.gene77857	MS.gene40988	PPI
MS.gene44886	MS.gene77857	PPI
MS.gene87562	MS.gene77857	PPI
MS.gene77857	MS.gene24173	PPI
MS.gene77857	MS.gene036584	PPI
MS.gene77857	MS.gene036662	PPI
MS.gene40904	MS.gene77857	PPI
MS.gene77857	MS.gene88776	PPI
MS.gene77857	MS.gene42451	PPI
MS.gene87569	MS.gene77857	PPI
MS.gene77857	MS.gene035261	PPI
MS.gene041491	MS.gene77857	PPI
MS.gene77857	MS.gene023999	PPI
MS.gene77857	MS.gene69307	PPI
MS.gene059096	MS.gene77857	PPI
MS.gene77857	MS.gene036581	PPI
MS.gene77857	MS.gene019507	PPI
MS.gene77857	MS.gene033431	PPI
MS.gene006711	MS.gene77857	PPI
MS.gene58716	MS.gene77857	PPI
MS.gene77857	MS.gene000036	PPI
MS.gene019505	MS.gene77857	PPI
MS.gene045476	MS.gene77857	PPI
MS.gene58785	MS.gene77857	PPI
MS.gene77857	MS.gene50320	PPI
MS.gene77857	MS.gene58314	PPI
MS.gene77857	MS.gene87557	PPI
MS.gene034690	MS.gene77857	PPI
MS.gene77857	MS.gene51199	PPI
MS.gene77857	MS.gene035263	PPI
MS.gene26949	MS.gene77857	PPI
MS.gene77857	MS.gene67501	PPI
MS.gene77857	MS.gene96406	PPI
MS.gene77857	MS.gene27285	PPI
MS.gene036760	MS.gene77857	PPI
MS.gene77857	MS.gene035262	PPI
MS.gene77857	MS.gene028390	PPI
MS.gene57527	MS.gene77857	PPI
MS.gene51191	MS.gene77857	PPI
MS.gene77857	MS.gene50336	PPI
MS.gene77857	MS.gene57526	PPI
MS.gene77857	MS.gene069075	PPI
MS.gene033426	MS.gene77857	PPI
MS.gene50298	MS.gene77857	PPI
MS.gene67687	MS.gene77857	PPI
MS.gene77857	MS.gene047279	PPI
MS.gene77857	MS.gene060370	PPI
MS.gene77857	MS.gene50305	PPI
MS.gene77857	MS.gene31637	PPI
MS.gene77857	MS.gene024002	PPI
MS.gene77857	MS.gene032969	PPI
MS.gene77857	MS.gene68890	PPI
MS.gene77857	MS.gene041392	PPI
MS.gene77857	MS.gene50297	PPI
MS.gene77857	MS.gene42445	PPI
MS.gene77857	MS.gene86273	PPI
MS.gene019506	MS.gene77857	PPI
MS.gene77857	MS.gene26830	PPI
MS.gene77857	MS.gene40985	PPI
MS.gene77857	MS.gene22715	PPI
MS.gene058692	MS.gene77857	PPI
MS.gene77857	MS.gene038756	PPI
MS.gene77857	MS.gene92376	PPI
MS.gene77857	MS.gene51207	PPI
MS.gene77857	MS.gene63657	PPI
MS.gene77857	MS.gene059157	PPI
MS.gene69309	MS.gene77857	PPI
MS.gene63658	MS.gene77857	PPI
MS.gene77857	MS.gene57527	PPI
MS.gene77857	MS.gene024004	PPI
MS.gene77857	MS.gene070462	PPI
MS.gene77857	MS.gene061240	PPI
MS.gene77857	MS.gene54049	PPI
MS.gene77857	MS.gene031590	PPI
MS.gene034686	MS.gene77857	PPI
MS.gene070461	MS.gene77857	PPI
MS.gene77857	MS.gene064086	PPI
MS.gene77857	MS.gene035234	PPI
MS.gene77857	MS.gene064090	PPI
MS.gene87559	MS.gene77857	PPI
MS.gene77857	MS.gene066639	PPI
MS.gene77857	MS.gene50332	PPI
MS.gene77857	MS.gene42447	PPI
MS.gene77857	MS.gene024979	PPI
MS.gene77857	MS.gene041475	PPI
MS.gene77857	MS.gene43789	PPI
MS.gene041475	MS.gene77857	PPI
MS.gene77857	MS.gene64203	PPI
MS.gene81242	MS.gene77857	PPI
MS.gene77857	MS.gene24826	PPI
MS.gene77857	MS.gene40904	PPI
MS.gene77857	MS.gene044425	PPI
MS.gene77857	MS.gene43790	PPI
MS.gene77857	MS.gene032970	PPI
MS.gene77857	MS.gene57537	PPI
MS.gene51202	MS.gene77857	PPI
MS.gene77857	MS.gene59637	PPI
MS.gene77857	MS.gene033426	PPI
MS.gene77857	MS.gene27022	PPI
MS.gene064111	MS.gene77857	PPI
MS.gene77857	MS.gene57530	PPI
MS.gene77857	MS.gene97996	PPI
MS.gene26829	MS.gene77857	PPI
MS.gene064104	MS.gene77857	PPI
MS.gene053256	MS.gene77857	PPI
MS.gene77857	MS.gene87585	PPI
MS.gene77857	MS.gene024009	PPI
MS.gene75875	MS.gene77857	PPI
MS.gene77857	MS.gene036599	PPI
MS.gene77857	MS.gene40887	PPI
MS.gene77857	MS.gene87200	PPI
MS.gene77857	MS.gene42444	PPI
MS.gene77857	MS.gene67687	PPI
MS.gene77857	MS.gene26101	PPI
MS.gene43789	MS.gene77857	PPI
MS.gene77857	MS.gene006705	PPI
MS.gene77857	MS.gene061241	PPI
MS.gene77857	MS.gene035237	PPI
MS.gene77857	MS.gene51188	PPI
MS.gene072177	MS.gene77857	PPI
MS.gene58722	MS.gene77857	PPI
MS.gene064091	MS.gene77857	PPI
MS.gene77857	MS.gene50309	PPI
MS.gene50307	MS.gene77857	PPI
MS.gene43796	MS.gene77857	PPI
MS.gene77857	MS.gene041394	PPI
MS.gene77857	MS.gene03060	PPI
MS.gene58312	MS.gene77857	PPI
MS.gene77857	MS.gene036664	PPI
MS.gene77857	MS.gene024011	PPI
MS.gene77857	MS.gene053257	PPI
MS.gene77857	MS.gene58241	PPI
MS.gene77857	MS.gene77858	PPI
MS.gene77857	MS.gene51201	PPI
MS.gene77857	MS.gene064109	PPI
MS.gene77857	MS.gene058696	PPI
MS.gene77857	MS.gene009893	PPI
MS.gene77857	MS.gene045475	PPI
MS.gene77857	MS.gene63655	PPI
MS.gene77857	MS.gene39262	PPI
MS.gene58313	MS.gene77857	PPI
MS.gene77857	MS.gene77704	PPI
MS.gene066622	MS.gene77857	PPI
MS.gene63655	MS.gene77857	PPI
MS.gene44883	MS.gene77857	PPI
MS.gene77857	MS.gene033083	PPI
MS.gene036583	MS.gene77857	PPI
MS.gene88780	MS.gene77857	PPI
MS.gene41046	MS.gene77857	PPI
MS.gene87588	MS.gene77857	PPI
MS.gene017412	MS.gene77857	PPI
MS.gene77857	MS.gene40886	PPI
MS.gene77857	MS.gene033081	PPI
MS.gene77857	MS.gene036663	PPI
MS.gene77857	MS.gene68580	PPI
MS.gene96448	MS.gene77857	PPI
MS.gene009883	MS.gene77857	PPI
MS.gene041392	MS.gene77857	PPI
MS.gene77857	MS.gene072177	PPI
MS.gene77857	MS.gene57525	PPI
MS.gene069075	MS.gene77857	PPI
MS.gene77857	MS.gene023996	PPI
MS.gene77857	MS.gene030114	PPI
MS.gene77857	MS.gene58716	PPI
MS.gene77857	MS.gene045473	PPI
MS.gene031591	MS.gene77857	PPI
MS.gene77857	MS.gene50301	PPI
MS.gene77857	MS.gene88774	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77857.t1	MTR_3g034160	90.385	312	29	1	1	312	64	374	0.0	564
MS.gene77857.t1	MTR_3g034180	86.538	312	41	1	1	312	178	488	0.0	556
MS.gene77857.t1	MTR_3g034130	86.288	299	41	0	1	299	64	362	0.0	528
MS.gene77857.t1	MTR_3g103020	63.492	315	100	6	3	313	75	378	2.41e-132	381
MS.gene77857.t1	MTR_4g117720	62.963	324	94	11	1	313	70	378	1.28e-125	364
MS.gene77857.t1	MTR_6g060650	61.801	322	102	6	1	312	62	372	6.06e-122	355
MS.gene77857.t1	MTR_4g109270	57.367	319	112	7	1	313	64	364	7.55e-111	326
MS.gene77857.t1	MTR_4g109280	61.415	311	101	8	6	313	65	359	6.11e-110	323
MS.gene77857.t1	MTR_4g122850	56.369	314	120	9	6	313	62	364	6.20e-108	319
MS.gene77857.t1	MTR_4g117770	56.913	311	114	5	9	313	71	367	5.27e-105	311
MS.gene77857.t1	MTR_4g117810	56.913	311	114	5	9	313	71	367	5.27e-105	311
MS.gene77857.t1	MTR_4g094365	53.292	319	126	8	1	313	63	364	2.70e-101	301
MS.gene77857.t1	MTR_4g117850	55.700	307	111	9	7	306	85	373	8.93e-101	301
MS.gene77857.t1	MTR_4g117780	54.808	312	119	7	9	313	71	367	6.52e-100	298
MS.gene77857.t1	MTR_4g023080	53.822	314	119	8	1	312	64	353	4.78e-99	295
MS.gene77857.t1	MTR_4g023090	50.456	329	128	8	1	311	71	382	9.13e-98	293
MS.gene77857.t1	MTR_4g118380	54.636	302	105	6	6	286	67	357	1.16e-97	292
MS.gene77857.t1	MTR_4g021785	51.746	315	127	7	1	313	64	355	6.95e-96	288
MS.gene77857.t1	MTR_5g097210	50.820	305	134	6	7	310	71	360	1.30e-95	288
MS.gene77857.t1	MTR_4g023380	48.680	341	115	9	1	313	71	379	7.39e-93	281
MS.gene77857.t1	MTR_4g116330	51.603	312	130	7	8	313	84	380	1.35e-92	280
MS.gene77857.t1	MTR_5g070080	50.602	332	126	8	6	313	69	386	3.33e-92	279
MS.gene77857.t1	MTR_5g070130	49.844	321	135	9	6	313	70	377	6.87e-90	273
MS.gene77857.t1	MTR_4g117870	50.318	314	108	7	1	313	1	267	6.23e-89	267
MS.gene77857.t1	MTR_4g023070	48.788	330	133	11	1	312	58	369	5.50e-88	268
MS.gene77857.t1	MTR_4g023120	48.632	329	137	10	1	313	58	370	6.24e-86	263
MS.gene77857.t1	MTR_1g055135	47.937	315	144	8	7	313	73	375	1.39e-85	262
MS.gene77857.t1	MTR_4g023130	54.613	271	99	7	44	312	64	312	2.13e-85	259
MS.gene77857.t1	MTR_4g117750	50.000	312	127	7	7	309	64	355	3.73e-85	264
MS.gene77857.t1	MTR_4g117750	61.468	109	40	1	205	311	373	481	5.76e-35	132
MS.gene77857.t1	MTR_8g433040	50.000	312	123	9	9	313	79	364	1.47e-83	256
MS.gene77857.t1	MTR_8g032380	50.000	312	123	9	9	313	79	364	1.47e-83	256
MS.gene77857.t1	MTR_4g023190	49.842	317	129	11	1	311	65	357	7.24e-82	252
MS.gene77857.t1	MTR_1g055195	47.484	318	140	8	2	313	182	478	4.35e-81	254
MS.gene77857.t1	MTR_5g070088	46.084	332	144	8	6	313	66	386	1.39e-80	249
MS.gene77857.t1	MTR_4g023200	48.580	317	134	11	1	311	65	358	2.46e-80	248
MS.gene77857.t1	MTR_4g023440	46.965	313	112	7	1	313	74	332	4.00e-80	246
MS.gene77857.t1	MTR_4g023150	48.265	317	135	11	1	311	65	358	9.75e-79	244
MS.gene77857.t1	MTR_8g032390	47.937	315	108	11	7	308	99	370	1.21e-77	241
MS.gene77857.t1	MTR_4g118400	47.508	301	110	8	16	307	33	294	1.56e-75	233
MS.gene77857.t1	MTR_4g116320	57.589	224	80	6	91	310	43	255	5.67e-75	231
MS.gene77857.t1	MTR_8g040935	56.338	213	81	4	107	313	2	208	2.48e-72	222
MS.gene77857.t1	MTR_7g079400	42.718	309	154	8	14	313	43	337	2.90e-71	224
MS.gene77857.t1	MTR_8g013010	58.796	216	72	6	1	214	109	309	8.83e-70	219
MS.gene77857.t1	MTR_4g118370	45.714	280	120	6	33	310	8	257	1.09e-68	215
MS.gene77857.t1	MTR_7g079370	42.812	320	147	11	7	307	48	350	1.07e-65	210
MS.gene77857.t1	MTR_4g121580	46.732	306	113	13	7	303	75	339	2.31e-65	210
MS.gene77857.t1	MTR_8g433030	54.626	227	84	8	87	308	125	337	2.50e-65	209
MS.gene77857.t1	MTR_4g116330	43.590	312	116	8	8	313	84	341	4.03e-63	203
MS.gene77857.t1	MTR_6g463430	51.905	210	85	5	109	313	4	202	4.06e-56	181
MS.gene77857.t1	MTR_8g102520	40.385	312	144	10	7	313	48	322	2.23e-55	182
MS.gene77857.t1	MTR_1g055175	48.500	200	93	5	118	313	8	201	2.62e-53	173
MS.gene77857.t1	MTR_4g117530	39.310	290	116	10	28	313	20	253	1.05e-50	168
MS.gene77857.t1	MTR_1g055250	42.857	231	117	8	74	300	34	253	1.31e-50	171
MS.gene77857.t1	MTR_4g117430	51.724	174	61	4	46	217	3	155	2.67e-50	164
MS.gene77857.t1	MTR_4g114700	40.520	269	99	6	42	304	5	218	2.97e-47	159
MS.gene77857.t1	MTR_1g055165	52.147	163	75	3	153	313	157	318	1.70e-46	159
MS.gene77857.t1	MTR_4g116340	50.279	179	73	5	7	180	80	247	4.68e-44	151
MS.gene77857.t1	MTR_2g048580	34.194	310	158	11	10	313	73	342	5.46e-44	154
MS.gene77857.t1	MTR_4g118360	57.812	128	48	3	190	313	1	126	6.37e-41	139
MS.gene77857.t1	MTR_7g079420	34.397	282	130	9	45	313	905	1144	5.60e-39	146
MS.gene77857.t1	MTR_4g122860	41.709	199	74	8	123	313	156	320	1.49e-36	134
MS.gene77857.t1	MTR_8g098830	43.750	176	81	6	114	282	30	194	3.10e-35	127
MS.gene77857.t1	MTR_5g023000	66.667	93	31	0	221	313	7	99	6.09e-34	120
MS.gene77857.t1	MTR_6g034720	45.625	160	68	5	40	196	31	174	1.17e-31	118
MS.gene77857.t1	MTR_7g117720	50.000	162	63	8	7	163	52	200	4.18e-31	118
MS.gene77857.t1	MTR_7g117720	49.505	101	46	3	213	308	172	272	1.27e-17	81.6
MS.gene77857.t1	MTR_7g079450	41.060	151	64	5	174	313	1	137	2.78e-25	99.0
MS.gene77857.t1	MTR_5g069120	45.736	129	61	2	6	127	51	177	9.41e-23	93.2
MS.gene77857.t1	MTR_1g068875	29.183	257	149	12	3	243	52	291	2.68e-22	96.3
MS.gene77857.t1	MTR_2g028130	28.063	253	144	10	37	264	100	339	5.65e-21	92.8
MS.gene77857.t1	MTR_0667s0010	26.280	293	173	11	4	268	57	334	1.04e-20	92.0
MS.gene77857.t1	MTR_4g122840	41.912	136	41	4	181	313	164	264	1.27e-20	89.7
MS.gene77857.t1	MTR_4g133170	29.183	257	148	12	2	242	51	289	7.91e-20	89.4
MS.gene77857.t1	MTR_2g028160	27.465	284	158	11	21	274	86	351	1.15e-19	89.0
MS.gene77857.t1	MTR_2g426020	25.000	268	165	9	31	276	88	341	2.52e-19	88.2
MS.gene77857.t1	MTR_4g023430	54.878	82	34	1	235	313	141	222	2.72e-19	85.1
MS.gene77857.t1	MTR_2g024110	25.540	278	173	11	10	269	63	324	3.25e-19	87.4
MS.gene77857.t1	MTR_2g026010	27.203	261	162	11	32	276	78	326	1.44e-18	85.9
MS.gene77857.t1	MTR_4g070550	26.667	285	161	11	3	250	53	326	2.56e-18	85.1
MS.gene77857.t1	MTR_2g025960	26.296	270	158	11	39	282	1	255	3.48e-18	83.6
MS.gene77857.t1	MTR_8g013005	67.797	59	19	0	255	313	1	59	4.89e-18	77.0
MS.gene77857.t1	MTR_2g426070	29.279	222	130	8	57	264	129	337	7.22e-18	84.0
MS.gene77857.t1	MTR_2g031640	26.222	225	141	6	33	242	81	295	1.01e-17	83.2
MS.gene77857.t1	MTR_2g426090	24.723	271	164	11	29	276	86	339	5.34e-17	81.3
MS.gene77857.t1	MTR_1g068835	27.160	243	144	11	19	243	65	292	5.51e-17	80.9
MS.gene77857.t1	MTR_1g055200	50.549	91	39	3	42	131	5	90	5.54e-17	75.5
MS.gene77857.t1	MTR_7g070440	28.758	306	162	14	17	285	71	357	6.04e-17	80.9
MS.gene77857.t1	MTR_2g025420	24.735	283	170	10	23	274	86	356	7.19e-17	80.9
MS.gene77857.t1	MTR_2g078870	32.338	201	104	11	44	238	58	232	9.69e-17	79.7
MS.gene77857.t1	MTR_5g037680	25.723	311	191	11	13	305	93	381	2.02e-16	79.7
MS.gene77857.t1	MTR_2g028140	26.772	254	145	10	25	250	91	331	2.03e-16	79.7
MS.gene77857.t1	MTR_3g083640	27.206	272	162	11	44	305	157	402	4.08e-16	78.6
MS.gene77857.t1	MTR_2g021770	27.469	324	192	13	17	308	93	405	4.94e-16	78.6
MS.gene77857.t1	MTR_4g117550	27.796	313	176	13	17	311	94	374	5.79e-16	78.2
MS.gene77857.t1	MTR_3g083010	25.094	267	162	8	37	276	102	357	9.61e-16	77.8
MS.gene77857.t1	MTR_1g068860	26.582	237	147	9	21	243	71	294	1.53e-15	76.6
MS.gene77857.t1	MTR_5g068490	25.170	294	184	12	20	304	5	271	2.11e-15	75.5
MS.gene77857.t1	MTR_1g054725	29.437	231	131	11	21	238	95	306	2.71e-15	76.3
MS.gene77857.t1	MTR_4g031770	28.507	221	125	11	31	242	93	289	9.93e-15	74.3
MS.gene77857.t1	MTR_4g055060	27.823	248	147	10	9	243	94	322	2.54e-14	73.2
MS.gene77857.t1	MTR_4g030830	24.422	303	166	13	44	305	113	393	2.58e-14	73.2
MS.gene77857.t1	MTR_2g425980	28.070	228	133	8	54	262	119	334	3.29e-14	73.2
MS.gene77857.t1	MTR_2g031680	25.778	225	141	7	32	242	80	292	3.36e-14	72.8
MS.gene77857.t1	MTR_6g053240	25.604	207	130	5	41	238	125	316	3.52e-14	72.8
MS.gene77857.t1	MTR_8g467670	26.230	305	187	14	17	303	88	372	3.81e-14	72.8
MS.gene77857.t1	MTR_3g010870	28.037	214	123	9	32	238	122	311	4.05e-14	72.8
MS.gene77857.t1	MTR_2g021150	27.413	259	162	10	15	264	87	328	4.31e-14	72.4
MS.gene77857.t1	MTR_7g070830	26.360	239	137	9	56	264	146	375	4.37e-14	72.8
MS.gene77857.t1	MTR_2g021155	28.804	184	115	5	59	238	711	882	4.65e-14	73.2
MS.gene77857.t1	MTR_2g021155	29.075	227	140	9	22	242	110	321	7.10e-13	69.7
MS.gene77857.t1	MTR_3g010970	27.372	274	156	11	41	305	152	391	5.89e-14	72.0
MS.gene77857.t1	MTR_2g024100	30.516	213	114	11	47	238	107	306	7.29e-14	72.0
MS.gene77857.t1	MTR_6g053260	28.230	209	129	7	34	238	429	620	1.15e-13	72.0
MS.gene77857.t1	MTR_0044s0300	28.780	205	109	8	44	238	138	315	1.22e-13	71.2
MS.gene77857.t1	MTR_7g056390	27.622	286	139	12	41	285	130	388	1.55e-13	71.2
MS.gene77857.t1	MTR_5g064700	26.042	288	156	13	59	308	98	366	1.57e-13	70.9
MS.gene77857.t1	MTR_2g461450	26.667	225	139	8	34	251	99	304	1.74e-13	70.5
MS.gene77857.t1	MTR_8g099460	23.588	301	181	10	4	283	56	328	2.07e-13	70.5
MS.gene77857.t1	MTR_2g426060	24.715	263	153	11	33	264	88	336	5.30e-13	69.3
MS.gene77857.t1	MTR_2g043410	29.386	228	124	8	40	251	133	339	5.54e-13	69.3
MS.gene77857.t1	MTR_4g023100	64.286	56	18	1	257	312	65	118	5.83e-13	65.1
MS.gene77857.t1	MTR_2g078900	30.055	183	99	9	59	238	153	309	6.58e-13	68.9
MS.gene77857.t1	MTR_0129s0070	24.528	318	202	11	20	312	94	398	7.33e-13	68.9
MS.gene77857.t1	MTR_7g077910	25.652	230	137	7	41	251	42	256	1.00e-12	68.2
MS.gene77857.t1	MTR_3g072470	26.408	284	148	11	41	286	130	390	1.08e-12	68.6
MS.gene77857.t1	MTR_3g006670	28.182	220	134	9	31	242	133	336	1.18e-12	68.6
MS.gene77857.t1	MTR_5g097680	26.502	283	159	13	59	308	159	425	1.30e-12	68.2
MS.gene77857.t1	MTR_3g030250	25.806	279	159	9	46	305	130	379	1.69e-12	67.8
MS.gene77857.t1	MTR_6g027910	26.636	214	131	6	38	238	106	306	1.93e-12	67.8
MS.gene77857.t1	MTR_8g464770	25.325	308	195	11	17	307	88	377	1.93e-12	67.8
MS.gene77857.t1	MTR_1g094210	27.490	251	141	11	40	278	151	372	1.97e-12	67.8
MS.gene77857.t1	MTR_7g056290	27.305	282	145	11	41	285	134	392	2.07e-12	67.8
MS.gene77857.t1	MTR_7g445890	26.383	235	140	9	41	251	87	312	2.21e-12	67.4
MS.gene77857.t1	MTR_2g104340	26.537	309	149	13	47	308	117	394	2.25e-12	67.4
MS.gene77857.t1	MTR_3g023930	27.206	272	154	11	44	305	130	367	3.12e-12	67.0
MS.gene77857.t1	MTR_4g028510	27.698	278	161	11	59	310	139	402	4.02e-12	67.0
MS.gene77857.t1	MTR_5g022040	25.984	254	142	11	18	247	161	392	4.83e-12	66.6
MS.gene77857.t1	MTR_2g021950	25.545	321	189	18	17	306	92	393	5.02e-12	66.2
MS.gene77857.t1	MTR_7g057270	26.295	251	139	11	31	248	107	344	5.71e-12	66.2
MS.gene77857.t1	MTR_7g017040	24.224	322	198	13	16	306	88	394	6.03e-12	66.2
MS.gene77857.t1	MTR_0054s0090	25.263	285	172	9	56	311	135	407	6.81e-12	66.2
MS.gene77857.t1	MTR_3g009310	26.804	194	113	6	56	243	157	327	8.24e-12	65.9
MS.gene77857.t1	MTR_7g013590	28.155	206	131	6	44	242	129	324	8.66e-12	65.9
MS.gene77857.t1	MTR_7g069550	27.985	268	136	13	46	283	133	373	9.72e-12	65.5
MS.gene77857.t1	MTR_1g055145	46.575	73	37	2	158	229	131	202	1.08e-11	64.7
MS.gene77857.t1	MTR_2g038680	24.332	337	189	15	17	308	94	409	1.15e-11	65.5
MS.gene77857.t1	MTR_2g021190	26.733	202	131	7	41	238	116	304	1.18e-11	65.1
MS.gene77857.t1	MTR_7g056003	27.273	231	131	7	41	251	118	331	1.20e-11	65.5
MS.gene77857.t1	MTR_1g055375	24.913	289	184	12	31	305	97	366	1.22e-11	65.1
MS.gene77857.t1	MTR_6g090180	26.148	283	163	11	54	306	168	434	1.50e-11	65.1
MS.gene77857.t1	MTR_4g109290	60.377	53	21	0	261	313	136	188	1.54e-11	62.8
MS.gene77857.t1	MTR_7g056503	26.263	297	173	14	40	305	116	397	1.57e-11	65.1
MS.gene77857.t1	MTR_2g078850	28.713	202	115	8	44	238	130	309	1.60e-11	64.7
MS.gene77857.t1	MTR_3g030320	26.800	250	144	13	1	238	1	223	1.91e-11	64.3
MS.gene77857.t1	MTR_0054s0100	25.524	286	170	10	56	311	137	409	2.40e-11	64.3
MS.gene77857.t1	MTR_0129s0050	26.403	303	166	13	47	308	120	406	3.02e-11	64.3
MS.gene77857.t1	MTR_5g069390	25.000	296	169	12	44	310	146	417	3.09e-11	64.3
MS.gene77857.t1	MTR_5g086590	27.778	198	120	9	54	242	11	194	3.20e-11	62.8
MS.gene77857.t1	MTR_4g108820	27.530	247	132	11	30	260	96	311	3.35e-11	63.5
MS.gene77857.t1	MTR_1g055065	26.794	209	132	8	44	242	21	218	3.47e-11	63.2
MS.gene77857.t1	MTR_4g013180	25.974	231	139	7	44	251	105	326	3.96e-11	63.9
MS.gene77857.t1	MTR_5g059430	25.589	297	169	13	44	310	152	426	5.20e-11	63.5
MS.gene77857.t1	MTR_4g037465	25.769	260	142	11	36	264	110	349	5.44e-11	63.2
MS.gene77857.t1	MTR_7g078840	25.403	248	135	10	40	251	119	352	5.81e-11	63.2
MS.gene77857.t1	MTR_3g010590	26.977	215	117	10	32	238	124	306	5.97e-11	63.2
MS.gene77857.t1	MTR_1g007410	25.694	288	157	13	48	302	135	398	6.84e-11	63.2
MS.gene77857.t1	MTR_2g064960	64.286	42	15	0	272	313	18	59	7.89e-11	57.4
MS.gene77857.t1	MTR_4g014370	22.535	284	184	10	48	308	137	407	9.32e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77857.t1	AT3G06240	29.060	234	130	10	39	260	163	372	1.23e-18	86.3
MS.gene77857.t1	AT4G12560	28.063	253	164	10	40	276	90	340	4.22e-16	78.6
MS.gene77857.t1	AT4G12560	28.063	253	164	10	40	276	90	340	4.22e-16	78.6
MS.gene77857.t1	AT4G12560	28.063	253	164	10	40	276	90	340	4.22e-16	78.6

Find 71 sgRNAs with CRISPR-Local

Find 82 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCATTTGCATTCATATAATA+AGG	0.164755	3.4:+25738895	None:intergenic
TTGGAGAATTTCTCAGTCTA+TGG	0.212417	3.4:-25738702	MS.gene77857:CDS
GATTGTGATTTGTGGATATT+TGG	0.226311	3.4:-25738721	MS.gene77857:CDS
TCATGTTGTCTGTATGGTTT+TGG	0.229471	3.4:-25739081	MS.gene77857:CDS
TGAATATTGGCCATCTAAAT+TGG	0.231444	3.4:+25739101	None:intergenic
AGGATGGAACAATTGAAATA+TGG	0.245076	3.4:-25738672	MS.gene77857:CDS
GTTCTTCAAGCATTTATCTA+TGG	0.293765	3.4:-25739167	MS.gene77857:CDS
AAAGTAGGGATGCTCTTTAA+TGG	0.307585	3.4:-25738865	MS.gene77857:CDS
AAGAGATGCTTCAAAATCTA+TGG	0.318502	3.4:+25739296	None:intergenic
AGATAACATTTCATCACATT+TGG	0.331913	3.4:-25738989	MS.gene77857:CDS
TTTCCTCCTTCCAATTTAGA+TGG	0.347200	3.4:-25739111	MS.gene77857:CDS
ATTAAAGAGCATCCCTACTT+TGG	0.350034	3.4:+25738867	None:intergenic
ATGAAATGTTATCTTCTATT+GGG	0.360195	3.4:+25738998	None:intergenic
GATGAAATGTTATCTTCTAT+TGG	0.363006	3.4:+25738997	None:intergenic
CATACAGACAACATGAATAT+TGG	0.369761	3.4:+25739088	None:intergenic
TATTGTTGGCTTTGATTTAG+TGG	0.370118	3.4:-25738797	MS.gene77857:CDS
TTCAAGATTAGAATAAGATT+CGG	0.374154	3.4:+25739227	None:intergenic
TCAAGATTAGAATAAGATTC+GGG	0.381250	3.4:+25739228	None:intergenic
TCTTTAATGGGACTATTCAT+TGG	0.385160	3.4:-25738852	MS.gene77857:CDS
CAATATTCATGTTGTCTGTA+TGG	0.390156	3.4:-25739087	MS.gene77857:CDS
TTAAAGAGCATCCCTACTTT+GGG	0.407362	3.4:+25738868	None:intergenic
TGGAAATGTCATCAATAGAT+AGG	0.410119	3.4:+25738602	None:intergenic
AACCTATAGATTGTGATTTG+TGG	0.425796	3.4:-25738729	MS.gene77857:CDS
AGGTATTTGTTTGTGATGTC+CGG	0.430912	3.4:+25739134	None:intergenic
AAGTAGGGATGCTCTTTAAT+GGG	0.443644	3.4:-25738864	MS.gene77857:CDS
GGATGGAACAATTGAAATAT+GGG	0.445935	3.4:-25738671	MS.gene77857:CDS
CATTTGCATTCATATAATAA+GGG	0.448554	3.4:+25738896	None:intergenic
GAGTCTCTGCTTTCACTCCC+TGG	0.452167	3.4:-25738424	MS.gene77857:CDS
TGATTATGCGTCACCAATCC+AGG	0.453563	3.4:+25738922	None:intergenic
AATACAAAGTGCATTCGTCT+TGG	0.453817	3.4:-25738639	MS.gene77857:CDS
AATCACAATCTATAGGTTCA+TGG	0.456461	3.4:+25738734	None:intergenic
ATACAAAGTGCATTCGTCTT+GGG	0.456469	3.4:-25738638	MS.gene77857:CDS
GGTTCATGGTCAAAACCATC+TGG	0.456773	3.4:+25738748	None:intergenic
ATCCACAAATCACAATCTAT+AGG	0.460799	3.4:+25738727	None:intergenic
TGGGTCTTTACTCGTATCAT+AGG	0.461190	3.4:+25739017	None:intergenic
TCTAAATTGGAAGGAGGAAA+AGG	0.467688	3.4:+25739114	None:intergenic
ATTGGAACAAACGGTGGCAC+TGG	0.477184	3.4:-25738535	MS.gene77857:CDS
TTATCAATGGATGTTATTGT+TGG	0.479970	3.4:-25738811	MS.gene77857:CDS
CTCTGTATACATAGCCACTA+GGG	0.483092	3.4:+25738444	None:intergenic
TGGAGAATTTCTCAGTCTAT+GGG	0.490268	3.4:-25738701	MS.gene77857:CDS
CCATTCAAGAGATGATTACT+TGG	0.492530	3.4:-25739052	MS.gene77857:CDS
ATTTCTCAGTCTATGGGCTA+TGG	0.507502	3.4:-25738695	MS.gene77857:CDS
TGGTCAAAACCATCTGGAAA+AGG	0.508561	3.4:+25738754	None:intergenic
GCAAATGATGATCCCAAAGT+AGG	0.511115	3.4:-25738880	MS.gene77857:CDS
TGGAAAGATATTGAGTGTCC+TGG	0.515552	3.4:-25738940	MS.gene77857:CDS
CCAAGTAATCATCTCTTGAA+TGG	0.518868	3.4:+25739052	None:intergenic
AGTCTATGGGCTATGGAGGA+TGG	0.527414	3.4:-25738688	MS.gene77857:CDS
TTTCATTGAGAGCTAATACA+TGG	0.531728	3.4:-25738960	MS.gene77857:CDS
GAAATTAAAAGTTCATGTAG+AGG	0.538733	3.4:-25739207	MS.gene77857:CDS
ATTCGGGAGGCATAAAATCA+AGG	0.540291	3.4:+25739244	None:intergenic
CAAATGATGATCCCAAAGTA+GGG	0.543363	3.4:-25738879	MS.gene77857:CDS
GGTGGTATTATTGGAACAAA+CGG	0.557309	3.4:-25738544	MS.gene77857:CDS
TTCAAGAGATGATTACTTGG+TGG	0.560339	3.4:-25739049	MS.gene77857:CDS
TTGGCTTTGATTTAGTGGAA+AGG	0.565737	3.4:-25738792	MS.gene77857:CDS
TATTGGCCATCTAAATTGGA+AGG	0.567363	3.4:+25739105	None:intergenic
AACAAACGGTGGCACTGGAT+TGG	0.570072	3.4:-25738530	MS.gene77857:CDS
AGATATTGAGTGTCCTGGAT+TGG	0.574538	3.4:-25738935	MS.gene77857:CDS
TCTCAGTCTATGGGCTATGG+AGG	0.578722	3.4:-25738692	MS.gene77857:CDS
TGTTTGTGATGTCCGGTCGA+TGG	0.582419	3.4:+25739141	None:intergenic
TAAGCTTGATCACTGTCACC+AGG	0.583359	3.4:+25738406	None:intergenic
ACTGGATTGGTGAAGTATGA+TGG	0.588559	3.4:-25738517	MS.gene77857:CDS
TATCTATGGAATCCATCGAC+CGG	0.592196	3.4:-25739153	MS.gene77857:CDS
AAGCTTGATCACTGTCACCA+GGG	0.598347	3.4:+25738407	None:intergenic
ACTCTGTATACATAGCCACT+AGG	0.618200	3.4:+25738443	None:intergenic
TGGCCATCTAAATTGGAAGG+AGG	0.651013	3.4:+25739108	None:intergenic
CGAACCATGTGAACCCCTAG+TGG	0.657467	3.4:-25738458	MS.gene77857:CDS
AGATTAGAATAAGATTCGGG+AGG	0.659056	3.4:+25739231	None:intergenic
TCTGTATACATAGCCACTAG+GGG	0.693139	3.4:+25738445	None:intergenic
ATAGCCACTAGGGGTTCACA+TGG	0.697094	3.4:+25738454	None:intergenic
GGTATTATTGGAACAAACGG+TGG	0.700731	3.4:-25738541	MS.gene77857:CDS
TTGGTGAAGTATGATGGCAA+TGG	0.739876	3.4:-25738511	MS.gene77857:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATGAAATGTTATCTTCTATT+GGG	+	chr3.4:25738734-25738753	None:intergenic	20.0%
!!	CATTTGCATTCATATAATAA+GGG	+	chr3.4:25738836-25738855	None:intergenic	20.0%
!!	TCATTTGCATTCATATAATA+AGG	+	chr3.4:25738837-25738856	None:intergenic	20.0%
!!	TTCAAGATTAGAATAAGATT+CGG	+	chr3.4:25738505-25738524	None:intergenic	20.0%
!	AGATAACATTTCATCACATT+TGG	-	chr3.4:25738740-25738759	MS.gene77857:CDS	25.0%
!	GAAATTAAAAGTTCATGTAG+AGG	-	chr3.4:25738522-25738541	MS.gene77857:CDS	25.0%
!	GATGAAATGTTATCTTCTAT+TGG	+	chr3.4:25738735-25738754	None:intergenic	25.0%
!	TCAAGATTAGAATAAGATTC+GGG	+	chr3.4:25738504-25738523	None:intergenic	25.0%
!	TTATCAATGGATGTTATTGT+TGG	-	chr3.4:25738918-25738937	MS.gene77857:CDS	25.0%
!!	TTTTCGCAATGATTTATCAA+TGG	-	chr3.4:25738905-25738924	MS.gene77857:CDS	25.0%
	AACCTATAGATTGTGATTTG+TGG	-	chr3.4:25739000-25739019	MS.gene77857:CDS	30.0%
	AAGAGATGCTTCAAAATCTA+TGG	+	chr3.4:25738436-25738455	None:intergenic	30.0%
	AATCACAATCTATAGGTTCA+TGG	+	chr3.4:25738998-25739017	None:intergenic	30.0%
	ACAAAAAGTGGTGGTATTAT+TGG	-	chr3.4:25739176-25739195	MS.gene77857:CDS	30.0%
	AGGATGGAACAATTGAAATA+TGG	-	chr3.4:25739057-25739076	MS.gene77857:CDS	30.0%
	ATCCACAAATCACAATCTAT+AGG	+	chr3.4:25739005-25739024	None:intergenic	30.0%
	CAATATTCATGTTGTCTGTA+TGG	-	chr3.4:25738642-25738661	MS.gene77857:CDS	30.0%
	CATACAGACAACATGAATAT+TGG	+	chr3.4:25738644-25738663	None:intergenic	30.0%
	GGATGGAACAATTGAAATAT+GGG	-	chr3.4:25739058-25739077	MS.gene77857:CDS	30.0%
	GTTCTTCAAGCATTTATCTA+TGG	-	chr3.4:25738562-25738581	MS.gene77857:CDS	30.0%
	TCTTTAATGGGACTATTCAT+TGG	-	chr3.4:25738877-25738896	MS.gene77857:CDS	30.0%
	TGAATATTGGCCATCTAAAT+TGG	+	chr3.4:25738631-25738650	None:intergenic	30.0%
	TGGAAATGTCATCAATAGAT+AGG	+	chr3.4:25739130-25739149	None:intergenic	30.0%
	TTTCATTGAGAGCTAATACA+TGG	-	chr3.4:25738769-25738788	MS.gene77857:CDS	30.0%
!	ACTTTTTGTAGAGCATATTG+GGG	+	chr3.4:25739165-25739184	None:intergenic	30.0%
!	GATTGTGATTTGTGGATATT+TGG	-	chr3.4:25739008-25739027	MS.gene77857:CDS	30.0%
!!	CACTTTTTGTAGAGCATATT+GGG	+	chr3.4:25739166-25739185	None:intergenic	30.0%
!!	TATTGTTGGCTTTGATTTAG+TGG	-	chr3.4:25738932-25738951	MS.gene77857:CDS	30.0%
	AAAGTAGGGATGCTCTTTAA+TGG	-	chr3.4:25738864-25738883	MS.gene77857:CDS	35.0%
	AAGTAGGGATGCTCTTTAAT+GGG	-	chr3.4:25738865-25738884	MS.gene77857:CDS	35.0%
	AATACAAAGTGCATTCGTCT+TGG	-	chr3.4:25739090-25739109	MS.gene77857:CDS	35.0%
	AGATTAGAATAAGATTCGGG+AGG	+	chr3.4:25738501-25738520	None:intergenic	35.0%
	AGGTATTTGTTTGTGATGTC+CGG	+	chr3.4:25738598-25738617	None:intergenic	35.0%
	ATACAAAGTGCATTCGTCTT+GGG	-	chr3.4:25739091-25739110	MS.gene77857:CDS	35.0%
	ATATGCTCTACAAAAAGTGG+TGG	-	chr3.4:25739167-25739186	MS.gene77857:CDS	35.0%
	CAAATGATGATCCCAAAGTA+GGG	-	chr3.4:25738850-25738869	MS.gene77857:CDS	35.0%
	CCAAGTAATCATCTCTTGAA+TGG	+	chr3.4:25738680-25738699	None:intergenic	35.0%
	CCAATATGCTCTACAAAAAG+TGG	-	chr3.4:25739164-25739183	MS.gene77857:CDS	35.0%
	CCATTCAAGAGATGATTACT+TGG	-	chr3.4:25738677-25738696	MS.gene77857:CDS	35.0%
	GGTGGTATTATTGGAACAAA+CGG	-	chr3.4:25739185-25739204	MS.gene77857:CDS	35.0%
	TATTGGCCATCTAAATTGGA+AGG	+	chr3.4:25738627-25738646	None:intergenic	35.0%
	TCTAAATTGGAAGGAGGAAA+AGG	+	chr3.4:25738618-25738637	None:intergenic	35.0%
	TGGAGAATTTCTCAGTCTAT+GGG	-	chr3.4:25739028-25739047	MS.gene77857:CDS	35.0%
	TTCAAGAGATGATTACTTGG+TGG	-	chr3.4:25738680-25738699	MS.gene77857:CDS	35.0%
	TTGGAGAATTTCTCAGTCTA+TGG	-	chr3.4:25739027-25739046	MS.gene77857:CDS	35.0%
	TTTCCTCCTTCCAATTTAGA+TGG	-	chr3.4:25738618-25738637	MS.gene77857:CDS	35.0%
!	CATGTTGTCTGTATGGTTTT+GGG	-	chr3.4:25738649-25738668	MS.gene77857:CDS	35.0%
!	CTTTTTGTAGAGCATATTGG+GGG	+	chr3.4:25739164-25739183	None:intergenic	35.0%
!	TCATGTTGTCTGTATGGTTT+TGG	-	chr3.4:25738648-25738667	MS.gene77857:CDS	35.0%
!!	ATTAAAGAGCATCCCTACTT+TGG	+	chr3.4:25738865-25738884	None:intergenic	35.0%
!!	TTAAAGAGCATCCCTACTTT+GGG	+	chr3.4:25738864-25738883	None:intergenic	35.0%
!!	TTGGCTTTGATTTAGTGGAA+AGG	-	chr3.4:25738937-25738956	MS.gene77857:CDS	35.0%
!!!	CCACTTTTTGTAGAGCATAT+TGG	+	chr3.4:25739167-25739186	None:intergenic	35.0%
	ACTCTGTATACATAGCCACT+AGG	+	chr3.4:25739289-25739308	None:intergenic	40.0%
	AGATATTGAGTGTCCTGGAT+TGG	-	chr3.4:25738794-25738813	MS.gene77857:CDS	40.0%
	CTCTGTATACATAGCCACTA+GGG	+	chr3.4:25739288-25739307	None:intergenic	40.0%
	GCAAATGATGATCCCAAAGT+AGG	-	chr3.4:25738849-25738868	MS.gene77857:CDS	40.0%
	GGTATTATTGGAACAAACGG+TGG	-	chr3.4:25739188-25739207	MS.gene77857:CDS	40.0%
	TATCTATGGAATCCATCGAC+CGG	-	chr3.4:25738576-25738595	MS.gene77857:CDS	40.0%
	TATTGGGGGATAGTACTCAA+TGG	+	chr3.4:25739150-25739169	None:intergenic	40.0%
	TCTGTATACATAGCCACTAG+GGG	+	chr3.4:25739287-25739306	None:intergenic	40.0%
	TGGAAAGATATTGAGTGTCC+TGG	-	chr3.4:25738789-25738808	MS.gene77857:CDS	40.0%
	TGGGTCTTTACTCGTATCAT+AGG	+	chr3.4:25738715-25738734	None:intergenic	40.0%
	TGGTCAAAACCATCTGGAAA+AGG	+	chr3.4:25738978-25738997	None:intergenic	40.0%
	TTGGTGAAGTATGATGGCAA+TGG	-	chr3.4:25739218-25739237	MS.gene77857:CDS	40.0%
!	ATTCGGGAGGCATAAAATCA+AGG	+	chr3.4:25738488-25738507	None:intergenic	40.0%
!	ATTTCTCAGTCTATGGGCTA+TGG	-	chr3.4:25739034-25739053	MS.gene77857:CDS	40.0%
!!	ACTGGATTGGTGAAGTATGA+TGG	-	chr3.4:25739212-25739231	MS.gene77857:CDS	40.0%
	AAGCTTGATCACTGTCACCA+GGG	+	chr3.4:25739325-25739344	None:intergenic	45.0%
	GGTTCATGGTCAAAACCATC+TGG	+	chr3.4:25738984-25739003	None:intergenic	45.0%
	TAAGCTTGATCACTGTCACC+AGG	+	chr3.4:25739326-25739345	None:intergenic	45.0%
	TGATTATGCGTCACCAATCC+AGG	+	chr3.4:25738810-25738829	None:intergenic	45.0%
	TGGCCATCTAAATTGGAAGG+AGG	+	chr3.4:25738624-25738643	None:intergenic	45.0%
!	TTCGAGATGCCTTTTCCAGA+TGG	-	chr3.4:25738966-25738985	MS.gene77857:CDS	45.0%
	ATAGCCACTAGGGGTTCACA+TGG	+	chr3.4:25739278-25739297	None:intergenic	50.0%
	ATTGGAACAAACGGTGGCAC+TGG	-	chr3.4:25739194-25739213	MS.gene77857:CDS	50.0%
	TGTTTGTGATGTCCGGTCGA+TGG	+	chr3.4:25738591-25738610	None:intergenic	50.0%
!	AACAAACGGTGGCACTGGAT+TGG	-	chr3.4:25739199-25739218	MS.gene77857:CDS	50.0%
!	AGTCTATGGGCTATGGAGGA+TGG	-	chr3.4:25739041-25739060	MS.gene77857:CDS	50.0%
!	TCTCAGTCTATGGGCTATGG+AGG	-	chr3.4:25739037-25739056	MS.gene77857:CDS	50.0%
	CGAACCATGTGAACCCCTAG+TGG	-	chr3.4:25739271-25739290	MS.gene77857:CDS	55.0%
	GAGTCTCTGCTTTCACTCCC+TGG	-	chr3.4:25739305-25739324	MS.gene77857:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	25738405	25739346	25738405	ID=MS.gene77857
chr3.4	mRNA	25738405	25739346	25738405	ID=MS.gene77857.t1;Parent=MS.gene77857
chr3.4	exon	25738405	25739346	25738405	ID=MS.gene77857.t1.exon1;Parent=MS.gene77857.t1
chr3.4	CDS	25738405	25739346	25738405	ID=cds.MS.gene77857.t1;Parent=MS.gene77857.t1

Gene Sequence

>MS.gene77857

ATGTCAACTCTAGCTCTTGAAACTCGATCCATAGATTTTGAAGCATCTCTTAACGATGATTCTGCTTCTACTTCACTGAACCTTGATTTTATGCCTCCCGAATCTTATTCTAATCTTGAAATTAAAAGTTCATGTAGAGGATTTATAGTTTTGACTTGTTCTTCAAGCATTTATCTATGGAATCCATCGACCGGACATCACAAACAAATACCTTTTCCTCCTTCCAATTTAGATGGCCAATATTCATGTTGTCTGTATGGTTTTGGGTACGACCATTCAAGAGATGATTACTTGGTGGTATCAGTGTCCTATGATACGAGTAAAGACCCAATAGAAGATAACATTTCATCACATTTGGAGTTTTTTTCATTGAGAGCTAATACATGGAAAGATATTGAGTGTCCTGGATTGGTGACGCATAATCACTTCCCTTATTATATGAATGCAAATGATGATCCCAAAGTAGGGATGCTCTTTAATGGGACTATTCATTGGTTCTCTTTTCGCAATGATTTATCAATGGATGTTATTGTTGGCTTTGATTTAGTGGAAAGGAAACTTTTCGAGATGCCTTTTCCAGATGGTTTTGACCATGAACCTATAGATTGTGATTTGTGGATATTTGGAGAATTTCTCAGTCTATGGGCTATGGAGGATGGAACAATTGAAATATGGGTTATGAAAGAATACAAAGTGCATTCGTCTTGGGTTAAAACTCTTGTCCTATCTATTGATGACATTTCCATTGAGTACTATCCCCCAATATGCTCTACAAAAAGTGGTGGTATTATTGGAACAAACGGTGGCACTGGATTGGTGAAGTATGATGGCAATGGTCAGTTGCTAGAGAATCGCTCGTACTATAACGAACCATGTGAACCCCTAGTGGCTATGTATACAGAGTCTCTGCTTTCACTCCCTGGTGACAGTGATCAAGCTTAA

Protein sequence

>MS.gene77857.t1

MSTLALETRSIDFEASLNDDSASTSLNLDFMPPESYSNLEIKSSCRGFIVLTCSSSIYLWNPSTGHHKQIPFPPSNLDGQYSCCLYGFGYDHSRDDYLVVSVSYDTSKDPIEDNISSHLEFFSLRANTWKDIECPGLVTHNHFPYYMNANDDPKVGMLFNGTIHWFSFRNDLSMDVIVGFDLVERKLFEMPFPDGFDHEPIDCDLWIFGEFLSLWAMEDGTIEIWVMKEYKVHSSWVKTLVLSIDDISIEYYPPICSTKSGGIIGTNGGTGLVKYDGNGQLLENRSYYNEPCEPLVAMYTESLLSLPGDSDQA