AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064112

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064112.t1 MTR_4g023080 64.486 214 55 3 1 213 131 324 6.15e-89 266
MS.gene064112.t1 MTR_4g023130 64.486 214 55 3 1 213 90 283 7.52e-89 265
MS.gene064112.t1 MTR_4g023090 62.281 228 59 4 1 213 139 354 5.18e-88 265
MS.gene064112.t1 MTR_4g021785 60.465 215 63 3 1 213 131 325 7.75e-83 251
MS.gene064112.t1 MTR_4g023380 57.203 236 51 4 1 213 139 347 5.26e-82 249
MS.gene064112.t1 MTR_4g023070 57.143 210 74 3 18 211 129 338 9.74e-76 233
MS.gene064112.t1 MTR_4g023120 56.190 210 76 3 18 211 129 338 6.15e-75 231
MS.gene064112.t1 MTR_4g117720 55.093 216 82 6 1 213 137 340 1.58e-67 212
MS.gene064112.t1 MTR_4g116330 51.163 215 87 5 1 213 148 346 9.18e-65 205
MS.gene064112.t1 MTR_4g122850 54.167 216 81 9 1 210 125 328 4.26e-64 204
MS.gene064112.t1 MTR_8g032390 52.968 219 85 8 1 213 139 345 9.46e-64 202
MS.gene064112.t1 MTR_6g060650 51.163 215 91 5 1 213 139 341 1.74e-63 202
MS.gene064112.t1 MTR_3g034130 53.398 206 82 5 20 213 141 344 3.85e-63 201
MS.gene064112.t1 MTR_3g103020 51.376 218 88 5 1 213 142 346 7.07e-63 200
MS.gene064112.t1 MTR_4g117850 54.545 198 83 5 23 213 150 347 7.16e-63 200
MS.gene064112.t1 MTR_4g094365 50.222 225 92 6 1 220 130 339 1.27e-61 197
MS.gene064112.t1 MTR_8g433030 54.680 203 82 8 17 213 114 312 6.61e-61 194
MS.gene064112.t1 MTR_4g023440 48.889 225 55 4 3 219 144 316 6.00e-60 191
MS.gene064112.t1 MTR_3g034180 52.427 206 83 6 20 213 255 457 1.54e-59 195
MS.gene064112.t1 MTR_4g116320 56.522 184 75 4 33 213 43 224 1.99e-59 188
MS.gene064112.t1 MTR_4g023150 49.138 232 86 7 1 219 132 344 2.42e-59 191
MS.gene064112.t1 MTR_4g109270 52.074 217 83 6 1 213 133 332 6.13e-59 190
MS.gene064112.t1 MTR_4g023190 50.000 232 83 8 1 219 132 343 1.06e-58 189
MS.gene064112.t1 MTR_8g040935 52.571 175 77 4 44 213 1 174 1.89e-58 184
MS.gene064112.t1 MTR_8g433040 47.598 229 94 6 1 224 138 345 2.11e-57 186
MS.gene064112.t1 MTR_8g032380 47.598 229 94 6 1 224 138 345 2.11e-57 186
MS.gene064112.t1 MTR_4g118380 48.430 223 90 6 1 211 141 350 3.48e-57 185
MS.gene064112.t1 MTR_4g023200 47.845 232 89 7 1 219 132 344 8.25e-57 184
MS.gene064112.t1 MTR_4g109280 57.143 182 72 5 33 211 145 323 1.14e-56 184
MS.gene064112.t1 MTR_3g034160 52.657 207 82 6 20 213 141 344 2.00e-55 181
MS.gene064112.t1 MTR_4g117770 51.500 200 84 5 20 213 143 335 1.75e-54 178
MS.gene064112.t1 MTR_4g117810 51.500 200 84 5 20 213 143 335 1.75e-54 178
MS.gene064112.t1 MTR_4g117780 47.489 219 94 6 1 213 132 335 3.35e-53 175
MS.gene064112.t1 MTR_5g070130 46.231 199 95 4 26 213 147 344 3.29e-52 173
MS.gene064112.t1 MTR_6g463430 51.351 185 80 5 44 223 1 180 1.32e-51 166
MS.gene064112.t1 MTR_5g097210 48.624 218 86 8 1 211 131 329 9.68e-51 169
MS.gene064112.t1 MTR_4g117870 45.283 212 67 7 1 211 70 233 4.18e-48 159
MS.gene064112.t1 MTR_5g070080 50.000 188 89 5 29 213 168 353 4.98e-48 162
MS.gene064112.t1 MTR_4g121580 47.248 218 69 9 1 211 139 317 4.01e-47 160
MS.gene064112.t1 MTR_5g070088 45.078 193 95 4 29 213 164 353 3.82e-45 155
MS.gene064112.t1 MTR_1g055195 48.718 195 75 7 29 211 263 444 2.81e-44 154
MS.gene064112.t1 MTR_1g055135 46.829 205 83 7 24 211 145 340 2.20e-43 150
MS.gene064112.t1 MTR_4g116330 41.589 214 70 5 1 213 148 307 3.56e-42 146
MS.gene064112.t1 MTR_1g055250 44.330 194 96 8 25 211 46 234 6.64e-42 145
MS.gene064112.t1 MTR_4g118400 47.701 174 75 3 41 211 106 266 3.54e-41 142
MS.gene064112.t1 MTR_4g118370 44.330 194 80 7 25 211 54 226 7.88e-40 137
MS.gene064112.t1 MTR_4g117750 45.320 203 93 6 23 211 127 325 3.32e-38 138
MS.gene064112.t1 MTR_4g117750 60.759 79 31 0 135 213 373 451 3.21e-24 100
MS.gene064112.t1 MTR_4g117530 42.473 186 70 4 29 213 75 224 1.13e-37 132
MS.gene064112.t1 MTR_7g079370 41.262 206 107 7 29 224 133 334 2.03e-35 129
MS.gene064112.t1 MTR_8g013010 49.306 144 59 5 1 143 178 308 2.17e-34 125
MS.gene064112.t1 MTR_7g079400 39.796 196 104 7 27 213 110 300 2.27e-34 125
MS.gene064112.t1 MTR_4g114700 36.818 220 80 5 1 217 33 196 7.44e-34 122
MS.gene064112.t1 MTR_1g055175 47.468 158 73 6 61 211 12 166 2.31e-33 119
MS.gene064112.t1 MTR_4g117430 47.973 148 57 3 1 147 27 155 8.70e-33 116
MS.gene064112.t1 MTR_8g102520 38.889 198 99 8 29 213 101 289 9.94e-32 118
MS.gene064112.t1 MTR_1g055165 52.381 126 55 4 88 211 161 283 2.51e-30 114
MS.gene064112.t1 MTR_8g098830 40.351 171 83 7 54 213 31 193 1.54e-27 105
MS.gene064112.t1 MTR_5g023000 68.657 67 21 0 147 213 1 67 9.35e-26 96.7
MS.gene064112.t1 MTR_4g118360 60.976 82 28 2 132 213 15 92 5.86e-25 95.5
MS.gene064112.t1 MTR_4g023430 89.362 47 5 0 167 213 141 187 1.08e-24 97.4
MS.gene064112.t1 MTR_4g122860 42.581 155 56 8 64 211 158 286 2.96e-23 95.9
MS.gene064112.t1 MTR_6g034720 38.961 154 84 4 1 152 54 199 2.27e-22 91.3
MS.gene064112.t1 MTR_4g116340 53.409 88 39 2 25 111 161 247 1.95e-21 89.4
MS.gene064112.t1 MTR_7g079420 35.500 200 88 10 20 211 943 1109 3.32e-20 89.4
MS.gene064112.t1 MTR_2g028130 31.282 195 105 7 17 193 153 336 2.35e-18 83.2
MS.gene064112.t1 MTR_7g079450 42.056 107 57 3 107 213 3 104 4.15e-17 75.5
MS.gene064112.t1 MTR_2g048580 32.749 171 89 8 55 213 155 311 5.53e-17 79.0
MS.gene064112.t1 MTR_7g117720 66.667 57 18 1 158 213 186 242 2.96e-16 75.9
MS.gene064112.t1 MTR_7g117720 49.383 81 30 3 1 80 116 186 1.03e-12 66.2
MS.gene064112.t1 MTR_4g133170 29.944 177 114 6 26 196 141 313 9.91e-16 75.5
MS.gene064112.t1 MTR_8g101580 27.749 191 126 6 29 212 185 370 2.75e-15 74.3
MS.gene064112.t1 MTR_2g028160 31.868 182 107 6 25 193 161 338 4.57e-15 73.6
MS.gene064112.t1 MTR_1g068875 30.726 179 108 8 29 196 141 314 4.69e-15 73.6
MS.gene064112.t1 MTR_2g025960 30.000 170 111 4 29 193 70 236 7.99e-15 72.4
MS.gene064112.t1 MTR_2g055970 27.363 201 134 8 21 213 342 538 2.07e-14 72.0
MS.gene064112.t1 MTR_1g068860 32.335 167 98 8 27 182 141 303 3.37e-14 71.2
MS.gene064112.t1 MTR_2g426020 28.994 169 112 5 29 193 162 326 5.50e-14 70.5
MS.gene064112.t1 MTR_1g094210 26.943 193 120 7 29 213 196 375 8.41e-14 70.1
MS.gene064112.t1 MTR_2g026010 31.915 188 104 9 24 193 137 318 1.01e-13 69.7
MS.gene064112.t1 MTR_0667s0010 31.073 177 93 7 16 174 141 306 1.27e-13 69.7
MS.gene064112.t1 MTR_1g068835 29.341 167 101 6 27 179 140 303 1.61e-13 68.9
MS.gene064112.t1 MTR_2g024100 32.911 158 91 7 25 170 152 306 2.31e-13 68.9
MS.gene064112.t1 MTR_1g094210 26.131 199 126 7 29 219 196 381 2.71e-13 68.6
MS.gene064112.t1 MTR_4g070550 31.410 156 94 6 25 170 159 311 4.02e-13 68.2
MS.gene064112.t1 MTR_2g021050 31.548 168 99 7 19 174 122 285 4.29e-13 67.8
MS.gene064112.t1 MTR_7g070440 28.708 209 127 7 27 215 148 354 1.04e-12 66.6
MS.gene064112.t1 MTR_2g024110 28.191 188 116 8 29 200 141 325 5.86e-12 64.7
MS.gene064112.t1 MTR_2g031680 27.778 162 104 6 23 174 134 292 5.88e-12 64.7
MS.gene064112.t1 MTR_4g013180 27.551 196 109 6 30 196 157 348 8.98e-12 64.3
MS.gene064112.t1 MTR_2g426060 29.834 181 103 9 29 193 161 333 9.88e-12 63.9
MS.gene064112.t1 MTR_4g108820 32.468 154 93 7 23 175 146 289 1.01e-11 63.5
MS.gene064112.t1 MTR_1g055145 44.737 76 41 1 86 161 128 202 1.56e-11 62.8
MS.gene064112.t1 MTR_2g021155 29.648 199 117 11 29 212 740 930 3.19e-11 62.8
MS.gene064112.t1 MTR_2g046860 24.581 179 118 7 29 196 56 228 3.46e-11 62.0
MS.gene064112.t1 MTR_5g096710 25.943 212 136 6 16 208 160 369 5.46e-11 61.6
MS.gene064112.t1 MTR_7g070880 26.768 198 109 8 28 196 185 375 5.81e-11 61.6
MS.gene064112.t1 MTR_7g445890 24.215 223 136 5 19 208 131 353 5.94e-11 61.6
MS.gene064112.t1 MTR_3g036290 33.775 151 78 7 28 174 161 293 6.40e-11 61.6
MS.gene064112.t1 MTR_5g056020 28.054 221 116 10 30 208 172 391 6.85e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064112.t1 AT3G06240 32.432 185 113 6 29 210 215 390 6.52e-16 76.3
MS.gene064112.t1 AT4G12560 27.586 203 125 7 29 210 141 342 6.41e-11 61.6
MS.gene064112.t1 AT4G12560 27.586 203 125 7 29 210 141 342 6.41e-11 61.6
MS.gene064112.t1 AT4G12560 27.586 203 125 7 29 210 141 342 6.41e-11 61.6

Find 52 sgRNAs with CRISPR-Local

Find 58 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGAATAGCCCCATTAAAT+AGG 0.222547 4.3:-75409728 None:intergenic
CGCCTTCATATACTTGGTTT+TGG 0.241496 4.3:+75409534 MS.gene064112:CDS
ATGACAATGTGCTGCTAATT+TGG 0.251004 4.3:-75409487 None:intergenic
CATTGTTGCCTTTGATTTAA+CGG 0.288851 4.3:+75409785 MS.gene064112:CDS
AATTCTAGTTTGTGGGTATA+TGG 0.300528 4.3:+75409858 MS.gene064112:CDS
TATTTAATGGGGCTATTCAT+TGG 0.316240 4.3:+75409730 MS.gene064112:CDS
CTAATGATACAGTTGAAATA+TGG 0.329864 4.3:+75409913 MS.gene064112:CDS
ATGGCTTTGAGTCGTGATTT+AGG 0.341932 4.3:+75409753 MS.gene064112:CDS
AGAAAAGGGTCCCTATTTAA+TGG 0.349556 4.3:+75409717 MS.gene064112:CDS
GAAAAGGGTCCCTATTTAAT+GGG 0.364953 4.3:+75409718 MS.gene064112:CDS
CCGGTCAAGAGATGATTATT+TGG 0.374848 4.3:+75409563 MS.gene064112:CDS
TGTAGTTAATTCTAGTTTGT+GGG 0.415557 4.3:+75409851 MS.gene064112:CDS
GCAGCACATTGTCATCGTAT+TGG 0.424130 4.3:+75409495 MS.gene064112:CDS
GTCAATCATAGTCGCAGAAA+AGG 0.424575 4.3:+75409702 MS.gene064112:CDS
ATCTGCTACCATTGGATCAT+AGG 0.427213 4.3:-75409598 None:intergenic
ATGAATAGCCCCATTAAATA+GGG 0.428993 4.3:-75409727 None:intergenic
TCTTATCGCCTTCATATACT+TGG 0.436134 4.3:+75409528 MS.gene064112:CDS
GATATTATCGGAGGAAATCT+TGG 0.436612 4.3:+75410044 MS.gene064112:CDS
ATGTAGTTAATTCTAGTTTG+TGG 0.445103 4.3:+75409850 MS.gene064112:CDS
CTTTGAGTCGTGATTTAGGT+TGG 0.458224 4.3:+75409757 MS.gene064112:CDS
ATTTCTCAGTCGATGGGCTA+TGG 0.462969 4.3:+75409884 MS.gene064112:CDS
AGGAAATCTTGGTACTAGAT+TGG 0.488834 4.3:+75410055 MS.gene064112:CDS
AATACAAAGTGCATTCGTCT+TGG 0.494278 4.3:+75409946 MS.gene064112:CDS
TAATGGGGCTATTCATTGGA+TGG 0.494477 4.3:+75409734 MS.gene064112:CDS
TAATACATGGAAAGAAATTG+AGG 0.497226 4.3:+75409659 MS.gene064112:CDS
ATTGGGTGAAAGTATCGATC+AGG 0.504656 4.3:-75410002 None:intergenic
GTCAAGAGATGATTATTTGG+TGG 0.504882 4.3:+75409566 MS.gene064112:CDS
AACTAAATACATGACAAGTT+CGG 0.506028 4.3:-75410125 None:intergenic
TCTCATTTAAAGATAATACA+TGG 0.515197 4.3:+75409646 MS.gene064112:CDS
ATGGAGAATTTCTCAGTCGA+TGG 0.520871 4.3:+75409877 MS.gene064112:CDS
AACCAAAACCAAGTATATGA+AGG 0.524098 4.3:-75409536 None:intergenic
TCAATCATAGTCGCAGAAAA+GGG 0.531989 4.3:+75409703 MS.gene064112:CDS
GAAACAGCATCTGCTACCAT+TGG 0.535084 4.3:-75409606 None:intergenic
TTCATTGTCCTATGATCCAA+TGG 0.536743 4.3:+75409590 MS.gene064112:CDS
GCTGCTAATTTGGAGTCAAA+AGG 0.537694 4.3:-75409477 None:intergenic
GTATATGAAGGCGATAAGAC+TGG 0.541415 4.3:-75409524 None:intergenic
TTGGTGAAGTATAATGATGA+AGG 0.541886 4.3:+75410074 MS.gene064112:CDS
TAATGATACAGTTGAAATAT+GGG 0.542942 4.3:+75409914 MS.gene064112:CDS
CCAAATAATCATCTCTTGAC+CGG 0.557184 4.3:-75409563 None:intergenic
ACTACATAGTCAAACTCACT+TGG 0.565813 4.3:-75409834 None:intergenic
TAGTCAAACTCACTTGGAAG+TGG 0.572035 4.3:-75409828 None:intergenic
AATACATGGAAAGAAATTGA+GGG 0.574680 4.3:+75409660 MS.gene064112:CDS
TGGAGAATTTCTCAGTCGAT+GGG 0.597386 4.3:+75409878 MS.gene064112:CDS
GTGAAGTATAATGATGAAGG+AGG 0.601996 4.3:+75410077 MS.gene064112:CDS
AAATACATGACAAGTTCGGA+TGG 0.609589 4.3:-75410121 None:intergenic
CGATCAGGAATTGCATGAAG+AGG 0.610810 4.3:-75409987 None:intergenic
TTCGGATGGACTATTGCAGA+AGG 0.628395 4.3:-75410107 None:intergenic
TTGGAGTCAAAAGGAGACAC+GGG 0.631270 4.3:-75409468 None:intergenic
AGATGCTGTTTCAACAAATG+TGG 0.647519 4.3:+75409617 MS.gene064112:CDS
TTTGGAGTCAAAAGGAGACA+CGG 0.650067 4.3:-75409469 None:intergenic
AAAAGGGTCCCTATTTAATG+GGG 0.672236 4.3:+75409719 MS.gene064112:CDS
GACTATGATTGACATCGTAA+CGG 0.674942 4.3:-75409692 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAAAATGGTGATATTAT+CGG + chr4.3:75410032-75410051 MS.gene064112:CDS 20.0%
!! TAATGATACAGTTGAAATAT+GGG + chr4.3:75409914-75409933 MS.gene064112:CDS 20.0%
!! TCTCATTTAAAGATAATACA+TGG + chr4.3:75409646-75409665 MS.gene064112:CDS 20.0%
! AATACATGGAAAGAAATTGA+GGG + chr4.3:75409660-75409679 MS.gene064112:CDS 25.0%
! CTAATGATACAGTTGAAATA+TGG + chr4.3:75409913-75409932 MS.gene064112:CDS 25.0%
! TAATACATGGAAAGAAATTG+AGG + chr4.3:75409659-75409678 MS.gene064112:CDS 25.0%
!!! ATGTAGTTAATTCTAGTTTG+TGG + chr4.3:75409850-75409869 MS.gene064112:CDS 25.0%
!!! CATTTTTTGTAGAGTACATT+GGG - chr4.3:75410022-75410041 None:intergenic 25.0%
!!! TGTAGTTAATTCTAGTTTGT+GGG + chr4.3:75409851-75409870 MS.gene064112:CDS 25.0%
AAAAATGGTGATATTATCGG+AGG + chr4.3:75410035-75410054 MS.gene064112:CDS 30.0%
AACCAAAACCAAGTATATGA+AGG - chr4.3:75409539-75409558 None:intergenic 30.0%
AATGAATAGCCCCATTAAAT+AGG - chr4.3:75409731-75409750 None:intergenic 30.0%
ATGAATAGCCCCATTAAATA+GGG - chr4.3:75409730-75409749 None:intergenic 30.0%
CCAATGTACTCTACAAAAAA+TGG + chr4.3:75410020-75410039 MS.gene064112:CDS 30.0%
TATTTAATGGGGCTATTCAT+TGG + chr4.3:75409730-75409749 MS.gene064112:CDS 30.0%
TTGGTGAAGTATAATGATGA+AGG + chr4.3:75410074-75410093 MS.gene064112:CDS 30.0%
! CATTGTTGCCTTTGATTTAA+CGG + chr4.3:75409785-75409804 MS.gene064112:CDS 30.0%
! TTTTCGTTCCGTTAAATCAA+AGG - chr4.3:75409796-75409815 None:intergenic 30.0%
!! AATTCTAGTTTGTGGGTATA+TGG + chr4.3:75409858-75409877 MS.gene064112:CDS 30.0%
!!! CCATTTTTTGTAGAGTACAT+TGG - chr4.3:75410023-75410042 None:intergenic 30.0%
AAAAGGGTCCCTATTTAATG+GGG + chr4.3:75409719-75409738 MS.gene064112:CDS 35.0%
AAATACATGACAAGTTCGGA+TGG - chr4.3:75410124-75410143 None:intergenic 35.0%
AATACAAAGTGCATTCGTCT+TGG + chr4.3:75409946-75409965 MS.gene064112:CDS 35.0%
ACTACATAGTCAAACTCACT+TGG - chr4.3:75409837-75409856 None:intergenic 35.0%
AGAAAAGGGTCCCTATTTAA+TGG + chr4.3:75409717-75409736 MS.gene064112:CDS 35.0%
AGGAAATCTTGGTACTAGAT+TGG + chr4.3:75410055-75410074 MS.gene064112:CDS 35.0%
CCAAATAATCATCTCTTGAC+CGG - chr4.3:75409566-75409585 None:intergenic 35.0%
GAAAAGGGTCCCTATTTAAT+GGG + chr4.3:75409718-75409737 MS.gene064112:CDS 35.0%
GACTATGATTGACATCGTAA+CGG - chr4.3:75409695-75409714 None:intergenic 35.0%
GATATTATCGGAGGAAATCT+TGG + chr4.3:75410044-75410063 MS.gene064112:CDS 35.0%
GTCAAGAGATGATTATTTGG+TGG + chr4.3:75409566-75409585 MS.gene064112:CDS 35.0%
GTGAAGTATAATGATGAAGG+AGG + chr4.3:75410077-75410096 MS.gene064112:CDS 35.0%
TCAATCATAGTCGCAGAAAA+GGG + chr4.3:75409703-75409722 MS.gene064112:CDS 35.0%
TCTTATCGCCTTCATATACT+TGG + chr4.3:75409528-75409547 MS.gene064112:CDS 35.0%
TTCATTGTCCTATGATCCAA+TGG + chr4.3:75409590-75409609 MS.gene064112:CDS 35.0%
! ATGACAATGTGCTGCTAATT+TGG - chr4.3:75409490-75409509 None:intergenic 35.0%
!! AGATGCTGTTTCAACAAATG+TGG + chr4.3:75409617-75409636 MS.gene064112:CDS 35.0%
!!! TACTTGGTTTTGGTTATGAC+CGG + chr4.3:75409544-75409563 MS.gene064112:CDS 35.0%
ATCTGCTACCATTGGATCAT+AGG - chr4.3:75409601-75409620 None:intergenic 40.0%
ATGGAGAATTTCTCAGTCGA+TGG + chr4.3:75409877-75409896 MS.gene064112:CDS 40.0%
CCGGTCAAGAGATGATTATT+TGG + chr4.3:75409563-75409582 MS.gene064112:CDS 40.0%
CTTTGAGTCGTGATTTAGGT+TGG + chr4.3:75409757-75409776 MS.gene064112:CDS 40.0%
GTATATGAAGGCGATAAGAC+TGG - chr4.3:75409527-75409546 None:intergenic 40.0%
GTCAATCATAGTCGCAGAAA+AGG + chr4.3:75409702-75409721 MS.gene064112:CDS 40.0%
TAATGGGGCTATTCATTGGA+TGG + chr4.3:75409734-75409753 MS.gene064112:CDS 40.0%
TAGTCAAACTCACTTGGAAG+TGG - chr4.3:75409831-75409850 None:intergenic 40.0%
TGGAGAATTTCTCAGTCGAT+GGG + chr4.3:75409878-75409897 MS.gene064112:CDS 40.0%
! CGCCTTCATATACTTGGTTT+TGG + chr4.3:75409534-75409553 MS.gene064112:CDS 40.0%
! GCTGCTAATTTGGAGTCAAA+AGG - chr4.3:75409480-75409499 None:intergenic 40.0%
! TTTGGAGTCAAAAGGAGACA+CGG - chr4.3:75409472-75409491 None:intergenic 40.0%
!! ATGGCTTTGAGTCGTGATTT+AGG + chr4.3:75409753-75409772 MS.gene064112:CDS 40.0%
!! ATTGGGTGAAAGTATCGATC+AGG - chr4.3:75410005-75410024 None:intergenic 40.0%
CGATCAGGAATTGCATGAAG+AGG - chr4.3:75409990-75410009 None:intergenic 45.0%
GAAACAGCATCTGCTACCAT+TGG - chr4.3:75409609-75409628 None:intergenic 45.0%
GCAGCACATTGTCATCGTAT+TGG + chr4.3:75409495-75409514 MS.gene064112:CDS 45.0%
TTGGAGTCAAAAGGAGACAC+GGG - chr4.3:75409471-75409490 None:intergenic 45.0%
!! ATTTCTCAGTCGATGGGCTA+TGG + chr4.3:75409884-75409903 MS.gene064112:CDS 45.0%
!! TTCGGATGGACTATTGCAGA+AGG - chr4.3:75410110-75410129 None:intergenic 45.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 75409465 75410145 75409465 ID=MS.gene064112
chr4.3 mRNA 75409465 75410145 75409465 ID=MS.gene064112.t1;Parent=MS.gene064112
chr4.3 exon 75409465 75410145 75409465 ID=MS.gene064112.t1.exon1;Parent=MS.gene064112.t1
chr4.3 CDS 75409465 75410145 75409465 ID=cds.MS.gene064112.t1;Parent=MS.gene064112.t1
Gene Sequence

>MS.gene064112

ATGCCCGTGTCTCCTTTTGACTCCAAATTAGCAGCACATTGTCATCGTATTGGTTATGACCAGTCTTATCGCCTTCATATACTTGGTTTTGGTTATGACCGGTCAAGAGATGATTATTTGGTGGTTTCATTGTCCTATGATCCAATGGTAGCAGATGCTGTTTCAACAAATGTGGAGTTTTTCTCATTTAAAGATAATACATGGAAAGAAATTGAGGGTACTCACTTCCGTTACGATGTCAATCATAGTCGCAGAAAAGGGTCCCTATTTAATGGGGCTATTCATTGGATGGCTTTGAGTCGTGATTTAGGTTGGAGTGTCATTGTTGCCTTTGATTTAACGGAACGAAAATTGTTTGAGATGCCACTTCCAAGTGAGTTTGACTATGTAGTTAATTCTAGTTTGTGGGTATATGGAGAATTTCTCAGTCGATGGGCTATGGATTATGCTAATGATACAGTTGAAATATGGGTGATGAAAGAATACAAAGTGCATTCGTCTTGGACTAAAACTCTAGTTCTTCCTCTTCATGCAATTCCTGATCGATACTTTCACCCAATGTACTCTACAAAAAATGGTGATATTATCGGAGGAAATCTTGGTACTAGATTGGTGAAGTATAATGATGAAGGAGGCATCGCTCCTTCTGCAATAGTCCATCCGAACTTGTCATGTATTTAG
Protein sequence

>MS.gene064112.t1

MPVSPFDSKLAAHCHRIGYDQSYRLHILGFGYDRSRDDYLVVSLSYDPMVADAVSTNVEFFSFKDNTWKEIEGTHFRYDVNHSRRKGSLFNGAIHWMALSRDLGWSVIVAFDLTERKLFEMPLPSEFDYVVNSSLWVYGEFLSRWAMDYANDTVEIWVMKEYKVHSSWTKTLVLPLHAIPDRYFHPMYSTKNGDIIGGNLGTRLVKYNDEGGIAPSAIVHPNLSCI