AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene60027


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60027.t1 MTR_1g055165 68.493 365 61 3 8 371 1 312 1.83e-169 476
MS.gene60027.t1 MTR_1g055135 67.828 373 91 7 14 371 11 369 1.48e-166 471
MS.gene60027.t1 MTR_5g097210 53.723 376 143 8 8 371 1 357 5.22e-125 365
MS.gene60027.t1 MTR_4g117750 55.200 375 127 9 15 371 2 353 3.96e-116 347
MS.gene60027.t1 MTR_4g117750 50.909 110 43 4 268 371 373 477 9.09e-23 100
MS.gene60027.t1 MTR_3g034180 50.259 386 153 10 8 371 115 483 8.71e-115 343
MS.gene60027.t1 MTR_3g103020 53.191 376 135 11 15 371 19 372 3.05e-114 338
MS.gene60027.t1 MTR_4g117850 52.520 377 135 13 14 370 21 373 4.62e-113 335
MS.gene60027.t1 MTR_1g055195 64.085 284 93 7 93 371 193 472 8.42e-113 338
MS.gene60027.t1 MTR_4g109270 52.957 372 138 12 16 371 8 358 1.49e-112 333
MS.gene60027.t1 MTR_3g034130 51.482 371 142 9 15 363 8 362 3.34e-112 333
MS.gene60027.t1 MTR_4g109280 54.155 373 127 13 15 370 7 352 7.35e-109 323
MS.gene60027.t1 MTR_3g034160 49.741 386 155 9 8 371 1 369 9.11e-109 324
MS.gene60027.t1 MTR_4g122850 49.730 370 153 10 27 378 12 366 1.11e-108 324
MS.gene60027.t1 MTR_4g094365 49.468 376 157 9 10 371 2 358 9.98e-107 318
MS.gene60027.t1 MTR_4g023080 49.862 363 152 10 15 370 8 347 2.78e-104 312
MS.gene60027.t1 MTR_4g117770 50.402 373 150 11 14 371 9 361 4.91e-104 311
MS.gene60027.t1 MTR_4g117810 50.402 373 150 11 14 371 9 361 4.91e-104 311
MS.gene60027.t1 MTR_5g070080 50.660 379 157 11 15 371 9 379 7.40e-104 312
MS.gene60027.t1 MTR_4g117780 49.733 374 151 12 14 371 9 361 7.65e-103 308
MS.gene60027.t1 MTR_4g023090 46.366 399 165 11 1 371 1 378 9.37e-103 309
MS.gene60027.t1 MTR_4g021785 51.240 363 148 12 15 370 8 348 7.77e-102 306
MS.gene60027.t1 MTR_5g070130 48.556 381 158 10 12 371 7 370 9.12e-102 306
MS.gene60027.t1 MTR_1g055175 78.061 196 42 1 176 371 1 195 2.42e-101 298
MS.gene60027.t1 MTR_5g070088 48.731 394 151 11 12 371 3 379 4.21e-101 305
MS.gene60027.t1 MTR_4g116330 48.285 379 158 12 10 371 17 374 6.40e-101 304
MS.gene60027.t1 MTR_6g060650 50.130 385 150 11 10 371 2 367 2.64e-100 302
MS.gene60027.t1 MTR_4g023380 43.961 414 162 10 1 379 1 379 1.38e-94 288
MS.gene60027.t1 MTR_4g118380 48.128 374 142 11 10 349 2 357 3.31e-91 278
MS.gene60027.t1 MTR_4g023070 45.052 384 159 12 16 370 3 363 6.82e-91 278
MS.gene60027.t1 MTR_4g117720 45.889 377 129 11 15 371 50 371 1.10e-89 275
MS.gene60027.t1 MTR_8g433040 44.961 387 161 12 8 375 9 362 4.56e-88 271
MS.gene60027.t1 MTR_8g032380 44.961 387 161 12 8 375 9 362 4.56e-88 271
MS.gene60027.t1 MTR_4g023150 45.040 373 162 11 15 371 9 354 1.67e-87 269
MS.gene60027.t1 MTR_4g023120 43.603 383 166 10 16 370 3 363 3.33e-87 269
MS.gene60027.t1 MTR_4g118370 57.377 244 73 6 138 371 32 254 5.97e-87 264
MS.gene60027.t1 MTR_4g023200 44.193 353 164 11 30 371 24 354 5.78e-85 263
MS.gene60027.t1 MTR_4g023190 44.837 368 169 11 15 371 9 353 7.34e-85 262
MS.gene60027.t1 MTR_8g032390 45.641 390 135 15 8 371 31 369 9.41e-85 263
MS.gene60027.t1 MTR_4g023440 44.837 368 136 11 14 371 16 326 1.86e-84 260
MS.gene60027.t1 MTR_4g023130 43.802 363 133 10 15 370 8 306 9.83e-79 245
MS.gene60027.t1 MTR_4g116330 42.706 377 143 12 10 371 17 335 1.10e-76 241
MS.gene60027.t1 MTR_1g055250 56.098 246 83 6 163 388 49 289 3.90e-76 239
MS.gene60027.t1 MTR_8g433030 43.490 384 119 15 8 371 31 336 1.06e-72 230
MS.gene60027.t1 MTR_8g013010 47.857 280 106 9 15 277 53 309 5.88e-71 225
MS.gene60027.t1 MTR_4g121580 42.147 382 154 16 8 366 1 338 7.15e-67 217
MS.gene60027.t1 MTR_4g117870 42.321 293 117 7 90 371 10 261 4.13e-65 208
MS.gene60027.t1 MTR_4g118400 46.975 281 118 11 100 371 36 294 1.50e-62 203
MS.gene60027.t1 MTR_2g048580 39.945 363 179 16 15 371 7 336 5.62e-62 203
MS.gene60027.t1 MTR_7g079400 45.353 269 125 8 121 371 67 331 9.75e-61 199
MS.gene60027.t1 MTR_8g102520 37.634 372 155 13 15 371 7 316 2.75e-56 187
MS.gene60027.t1 MTR_7g079370 39.093 353 171 13 45 371 16 350 3.31e-55 186
MS.gene60027.t1 MTR_4g116320 47.489 219 91 7 168 371 43 252 1.15e-47 163
MS.gene60027.t1 MTR_8g040935 48.731 197 90 6 181 371 11 202 2.41e-45 155
MS.gene60027.t1 MTR_4g117530 42.259 239 89 7 144 371 47 247 1.23e-44 155
MS.gene60027.t1 MTR_4g116340 41.935 248 92 9 14 243 34 247 1.66e-43 152
MS.gene60027.t1 MTR_6g463430 47.120 191 90 6 183 371 15 196 2.57e-42 147
MS.gene60027.t1 MTR_7g079420 39.313 262 115 10 126 371 905 1138 8.19e-39 148
MS.gene60027.t1 MTR_4g117430 50.318 157 62 6 129 277 4 152 2.97e-37 132
MS.gene60027.t1 MTR_7g117720 41.748 206 75 6 15 205 9 184 5.04e-37 135
MS.gene60027.t1 MTR_7g117720 43.000 100 53 3 276 371 172 271 3.92e-14 72.4
MS.gene60027.t1 MTR_4g114700 36.680 259 96 10 127 367 9 217 1.41e-35 130
MS.gene60027.t1 MTR_1g094210 26.667 390 228 12 3 369 44 398 1.23e-33 129
MS.gene60027.t1 MTR_1g094210 27.049 366 211 11 3 345 44 376 1.82e-32 126
MS.gene60027.t1 MTR_2g021190 32.692 312 161 13 14 302 19 304 4.05e-32 125
MS.gene60027.t1 MTR_4g118360 58.182 110 37 4 266 371 16 120 4.49e-32 117
MS.gene60027.t1 MTR_2g021150 27.056 377 234 13 14 369 12 368 2.10e-30 120
MS.gene60027.t1 MTR_5g022420 29.503 322 184 11 4 312 15 306 2.70e-30 120
MS.gene60027.t1 MTR_2g021155 29.679 374 214 13 14 361 34 384 8.81e-30 122
MS.gene60027.t1 MTR_2g028140 32.121 330 164 14 16 302 5 317 2.46e-29 118
MS.gene60027.t1 MTR_4g109290 41.714 175 57 5 8 178 1 134 6.25e-29 111
MS.gene60027.t1 MTR_5g057790 32.492 317 156 15 16 306 46 330 2.93e-28 114
MS.gene60027.t1 MTR_8g098830 43.293 164 87 5 184 345 35 194 4.19e-28 110
MS.gene60027.t1 MTR_4g055060 30.094 319 174 10 14 307 28 322 8.17e-28 113
MS.gene60027.t1 MTR_2g028130 30.189 371 198 15 16 344 5 356 1.25e-27 113
MS.gene60027.t1 MTR_1g068875 28.931 318 170 12 16 307 4 291 2.03e-27 112
MS.gene60027.t1 MTR_3g009310 31.348 319 163 12 14 307 40 327 2.64e-27 112
MS.gene60027.t1 MTR_3g006670 31.546 317 158 14 14 302 47 332 3.07e-27 112
MS.gene60027.t1 MTR_2g028160 28.852 357 189 14 16 327 5 341 5.09e-27 111
MS.gene60027.t1 MTR_0667s0010 29.521 376 194 17 11 344 1 347 9.92e-27 110
MS.gene60027.t1 MTR_4g133170 26.023 342 191 10 16 327 4 313 1.32e-26 110
MS.gene60027.t1 MTR_5g011200 31.511 311 167 15 16 304 17 303 1.71e-26 109
MS.gene60027.t1 MTR_3g009240 31.392 309 162 12 14 302 34 312 3.49e-26 108
MS.gene60027.t1 MTR_5g057020 31.229 301 156 13 16 301 46 310 3.70e-26 108
MS.gene60027.t1 MTR_1g068835 29.781 319 167 12 16 307 4 292 4.03e-26 108
MS.gene60027.t1 MTR_1g097330 30.696 316 170 14 14 309 14 300 6.91e-26 108
MS.gene60027.t1 MTR_4g061340 30.149 335 171 13 4 307 14 316 1.03e-25 107
MS.gene60027.t1 MTR_3g083010 27.962 422 218 17 11 372 1 396 1.13e-25 107
MS.gene60027.t1 MTR_4g108820 29.412 323 148 13 14 318 40 300 1.26e-25 105
MS.gene60027.t1 MTR_2g046830 28.349 321 183 13 13 313 22 315 1.82e-25 107
MS.gene60027.t1 MTR_6g053240 27.832 309 185 10 14 302 26 316 2.30e-25 106
MS.gene60027.t1 MTR_2g025420 26.570 414 227 16 11 369 1 392 2.56e-25 106
MS.gene60027.t1 MTR_3g007270 27.245 323 183 12 14 307 45 344 2.62e-25 106
MS.gene60027.t1 MTR_5g057710 30.745 322 155 17 16 306 46 330 2.66e-25 106
MS.gene60027.t1 MTR_3g007360 29.499 339 166 15 19 323 55 354 2.89e-25 106
MS.gene60027.t1 MTR_6g065980 29.206 315 177 14 1 302 1 282 3.01e-25 105
MS.gene60027.t1 MTR_2g046920 28.387 310 183 10 13 306 21 307 3.10e-25 105
MS.gene60027.t1 MTR_4g070550 29.358 327 171 12 16 302 5 311 4.09e-25 105
MS.gene60027.t1 MTR_3g007410 29.499 339 166 15 19 323 55 354 4.57e-25 105
MS.gene60027.t1 MTR_2g028110 29.041 365 188 14 16 343 4 334 5.27e-25 105
MS.gene60027.t1 MTR_2g021050 28.371 356 194 12 16 343 5 327 7.08e-25 105
MS.gene60027.t1 MTR_4g122860 34.197 193 90 6 189 375 157 318 7.42e-25 104
MS.gene60027.t1 MTR_3g036290 30.693 303 175 13 13 307 19 294 7.54e-25 104
MS.gene60027.t1 MTR_2g021210 31.250 304 169 14 12 302 80 356 8.05e-25 105
MS.gene60027.t1 MTR_3g014540 32.704 318 160 17 14 306 27 315 8.43e-25 104
MS.gene60027.t1 MTR_4g031770 28.981 314 172 14 16 306 4 289 1.01e-24 104
MS.gene60027.t1 MTR_2g426090 30.816 331 173 15 11 306 1 310 1.03e-24 105
MS.gene60027.t1 MTR_3g007430 30.449 312 156 13 19 302 46 324 1.06e-24 104
MS.gene60027.t1 MTR_3g014570 32.609 322 157 16 14 307 27 316 1.11e-24 104
MS.gene60027.t1 MTR_5g057690 30.380 316 154 14 16 306 46 320 1.27e-24 104
MS.gene60027.t1 MTR_2g078900 28.086 324 173 12 4 302 21 309 2.72e-24 102
MS.gene60027.t1 MTR_7g079450 43.609 133 71 3 239 371 3 131 3.22e-24 97.4
MS.gene60027.t1 MTR_6g053260 28.803 309 177 11 14 302 335 620 3.51e-24 105
MS.gene60027.t1 MTR_2g425980 28.954 373 196 15 16 343 5 353 4.37e-24 103
MS.gene60027.t1 MTR_2g426020 25.373 402 229 15 11 368 1 375 4.61e-24 102
MS.gene60027.t1 MTR_3g010870 29.000 300 179 11 14 302 35 311 5.17e-24 102
MS.gene60027.t1 MTR_2g047832 28.399 331 190 13 13 313 26 339 5.21e-24 103
MS.gene60027.t1 MTR_2g026010 30.841 321 165 13 16 306 4 297 5.47e-24 102
MS.gene60027.t1 MTR_1g055145 63.855 83 29 1 211 293 121 202 7.39e-24 100
MS.gene60027.t1 MTR_1g055145 53.271 107 38 2 19 125 36 130 1.08e-23 99.8
MS.gene60027.t1 MTR_3g010590 30.405 296 173 14 14 302 37 306 8.84e-24 102
MS.gene60027.t1 MTR_3g007330 30.573 314 167 12 14 307 46 328 1.07e-23 102
MS.gene60027.t1 MTR_2g055970 29.560 318 167 14 15 306 210 496 1.12e-23 103
MS.gene60027.t1 MTR_2g029990 32.039 309 161 17 17 302 52 334 1.25e-23 101
MS.gene60027.t1 MTR_1g055375 29.967 307 179 12 19 306 7 296 1.36e-23 101
MS.gene60027.t1 MTR_8g101580 27.228 404 220 20 4 372 33 397 1.67e-23 101
MS.gene60027.t1 MTR_2g046900 28.391 317 182 12 13 306 25 319 1.83e-23 100
MS.gene60027.t1 MTR_6g027910 29.381 388 212 16 19 369 12 374 2.13e-23 100
MS.gene60027.t1 MTR_3g030250 27.508 309 195 11 4 306 25 310 2.18e-23 100
MS.gene60027.t1 MTR_7g407070 31.532 333 167 15 8 302 24 333 2.44e-23 100
MS.gene60027.t1 MTR_2g031640 28.649 370 193 14 11 343 1 336 2.62e-23 100
MS.gene60027.t1 MTR_7g070880 27.078 421 219 16 16 369 21 420 2.70e-23 100
MS.gene60027.t1 MTR_5g069120 38.542 192 80 8 26 193 1 178 2.81e-23 95.9
MS.gene60027.t1 MTR_3g036430 29.773 309 140 14 14 302 18 269 2.96e-23 99.8
MS.gene60027.t1 MTR_2g426070 28.788 330 172 11 17 306 7 313 3.45e-23 100
MS.gene60027.t1 MTR_0044s0300 28.481 316 181 15 5 302 27 315 3.50e-23 100
MS.gene60027.t1 MTR_5g023000 55.435 92 31 3 285 371 7 93 4.23e-23 93.2
MS.gene60027.t1 MTR_3g013740 30.982 326 163 16 16 306 44 342 6.32e-23 99.8
MS.gene60027.t1 MTR_8g467140 30.293 307 179 12 15 306 31 317 9.62e-23 98.2
MS.gene60027.t1 MTR_7g070830 26.492 419 224 14 16 369 21 420 1.12e-22 99.4
MS.gene60027.t1 MTR_0760s0010 29.655 290 175 12 21 303 52 319 1.23e-22 99.0
MS.gene60027.t1 MTR_3g023930 29.530 298 166 13 14 302 32 294 1.38e-22 98.2
MS.gene60027.t1 MTR_7g056003 27.764 407 241 13 9 369 8 407 1.59e-22 98.6
MS.gene60027.t1 MTR_6g090180 27.034 381 184 14 10 326 41 391 2.13e-22 98.6
MS.gene60027.t1 MTR_1g097560 27.297 370 176 16 10 339 30 346 2.25e-22 97.8
MS.gene60027.t1 MTR_1g050542 27.368 380 221 16 14 369 56 404 2.36e-22 98.2
MS.gene60027.t1 MTR_2g426060 28.363 342 173 16 11 308 1 314 2.67e-22 98.2
MS.gene60027.t1 MTR_7g007300 30.233 301 175 12 16 306 103 378 3.31e-22 98.2
MS.gene60027.t1 MTR_3g083640 26.735 389 213 16 14 369 53 402 3.37e-22 97.8
MS.gene60027.t1 MTR_3g010970 29.412 289 176 12 19 302 51 316 4.05e-22 97.4
MS.gene60027.t1 MTR_2g031680 28.395 324 172 12 11 306 1 292 4.59e-22 97.1
MS.gene60027.t1 MTR_2g024110 25.956 366 204 16 16 343 4 340 5.90e-22 96.7
MS.gene60027.t1 MTR_3g072470 29.538 325 191 10 16 310 19 335 8.01e-22 96.7
MS.gene60027.t1 MTR_6g021880 29.539 369 216 16 27 369 31 381 8.97e-22 96.3
MS.gene60027.t1 MTR_3g024110 29.568 301 174 14 14 302 99 373 1.17e-21 96.7
MS.gene60027.t1 MTR_7g056290 30.330 333 179 13 16 310 22 339 1.26e-21 96.3
MS.gene60027.t1 MTR_1g097490 27.083 384 222 18 9 369 42 390 1.30e-21 95.9
MS.gene60027.t1 MTR_3g024150 29.293 297 175 14 19 302 38 312 1.32e-21 95.9
MS.gene60027.t1 MTR_5g096910 24.812 399 244 14 9 370 10 389 1.44e-21 95.9
MS.gene60027.t1 MTR_3g010520 28.931 318 176 15 1 302 3 286 1.50e-21 95.1
MS.gene60027.t1 MTR_4g107820 26.485 404 224 18 4 375 29 391 1.50e-21 95.9
MS.gene60027.t1 MTR_3g010920 29.293 297 170 12 14 302 42 306 1.58e-21 95.5
MS.gene60027.t1 MTR_4g107780 26.485 404 224 18 4 375 29 391 1.67e-21 95.9
MS.gene60027.t1 MTR_3g006500 28.308 325 195 14 8 317 9 310 1.92e-21 95.1
MS.gene60027.t1 MTR_4g107820 26.434 401 222 18 4 372 29 388 2.53e-21 95.1
MS.gene60027.t1 MTR_4g107780 26.434 401 222 18 4 372 29 388 2.53e-21 95.1
MS.gene60027.t1 MTR_4g028510 26.588 425 230 21 1 370 1 398 5.12e-21 94.7
MS.gene60027.t1 MTR_3g036335 28.438 320 162 16 14 302 39 322 5.54e-21 94.0
MS.gene60027.t1 MTR_3g011100 29.677 310 186 13 14 307 233 526 5.78e-21 95.1
MS.gene60027.t1 MTR_7g056390 29.268 328 189 11 16 310 18 335 6.81e-21 94.0
MS.gene60027.t1 MTR_1g056710 30.892 314 165 16 16 306 34 318 8.21e-21 93.6
MS.gene60027.t1 MTR_7g077970 29.619 341 175 13 14 307 5 327 8.46e-21 94.0
MS.gene60027.t1 MTR_0464s0020 31.532 333 182 16 16 310 23 347 9.58e-21 93.6
MS.gene60027.t1 MTR_1g054725 30.159 315 166 15 15 302 19 306 1.64e-20 92.4
MS.gene60027.t1 MTR_1g055200 68.254 63 19 1 123 184 5 67 1.71e-20 86.3
MS.gene60027.t1 MTR_0128s0020 26.050 357 213 13 8 328 10 351 2.35e-20 92.0
MS.gene60027.t1 MTR_3g009260 30.530 321 153 15 12 302 34 314 2.95e-20 91.7
MS.gene60027.t1 MTR_7g056820 25.266 376 214 11 14 347 5 355 3.86e-20 91.3
MS.gene60027.t1 MTR_3g006570 28.479 309 175 12 14 302 19 301 4.81e-20 91.3
MS.gene60027.t1 MTR_8g073550 33.990 203 99 9 14 197 28 214 5.23e-20 88.6
MS.gene60027.t1 MTR_4g023430 74.138 58 15 0 15 72 40 97 5.28e-20 88.2
MS.gene60027.t1 MTR_6g080680 25.604 414 228 17 4 368 7 389 6.29e-20 90.9
MS.gene60027.t1 MTR_2g031720 28.788 330 160 15 16 306 6 299 6.36e-20 90.9
MS.gene60027.t1 MTR_8g062660 26.126 333 179 13 3 300 9 309 8.65e-20 91.7
MS.gene60027.t1 MTR_8g099460 28.307 378 182 17 16 343 5 343 9.45e-20 90.5
MS.gene60027.t1 MTR_3g010390 28.349 321 188 12 14 307 31 336 9.87e-20 90.5
MS.gene60027.t1 MTR_2g046800 27.114 343 185 14 14 312 12 333 1.04e-19 90.5
MS.gene60027.t1 MTR_3g030240 27.451 306 166 13 14 302 38 304 1.09e-19 90.1
MS.gene60027.t1 MTR_6g007135 28.391 317 193 12 16 313 26 327 1.29e-19 90.1
MS.gene60027.t1 MTR_5g007610 29.448 326 171 16 14 307 39 337 1.33e-19 90.1
MS.gene60027.t1 MTR_4g037465 28.061 392 204 16 9 349 14 378 1.42e-19 90.1
MS.gene60027.t1 MTR_3g030330 29.022 317 189 13 14 319 18 309 1.51e-19 89.7
MS.gene60027.t1 MTR_1g114700 28.247 308 185 12 14 304 27 315 1.61e-19 89.7
MS.gene60027.t1 MTR_7g060940 28.395 324 173 12 16 304 22 321 1.87e-19 89.7
MS.gene60027.t1 MTR_2g038680 25.485 412 230 13 16 370 16 407 2.34e-19 89.4
MS.gene60027.t1 MTR_3g011120 27.198 364 196 18 1 326 1 333 2.55e-19 89.0
MS.gene60027.t1 MTR_1g068860 30.154 325 160 13 16 307 4 294 2.77e-19 89.0
MS.gene60027.t1 MTR_3g013770 29.193 322 170 14 14 306 31 323 2.96e-19 89.0
MS.gene60027.t1 MTR_7g067680 27.954 347 192 15 14 344 47 351 3.14e-19 89.0
MS.gene60027.t1 MTR_4g129190 29.080 337 165 15 16 307 6 313 3.39e-19 89.0
MS.gene60027.t1 MTR_1g054575 26.332 319 184 11 14 312 50 337 3.70e-19 89.7
MS.gene60027.t1 MTR_3g010430 28.889 315 168 14 14 302 34 318 4.15e-19 88.6
MS.gene60027.t1 MTR_2g078850 26.452 310 169 13 19 302 33 309 5.93e-19 87.8
MS.gene60027.t1 MTR_7g050520 28.834 326 160 15 15 302 21 312 6.19e-19 88.2
MS.gene60027.t1 MTR_2g021252 26.330 376 213 16 19 370 50 385 6.23e-19 87.8
MS.gene60027.t1 MTR_7g078860 26.567 335 196 10 8 307 1 320 6.41e-19 87.8
MS.gene60027.t1 MTR_3g007300 28.094 299 168 9 14 307 47 303 6.59e-19 87.8
MS.gene60027.t1 MTR_6g004660 29.545 308 183 13 16 302 16 310 7.96e-19 87.4
MS.gene60027.t1 MTR_4g030830 25.791 411 238 14 8 369 1 393 9.30e-19 87.4
MS.gene60027.t1 MTR_3g436150 31.269 323 163 17 14 302 30 327 1.02e-18 87.4
MS.gene60027.t1 MTR_4g055820 27.424 361 184 16 1 306 1 338 1.19e-18 86.7
MS.gene60027.t1 MTR_5g069760 26.781 351 187 15 15 325 5 325 1.25e-18 87.0
MS.gene60027.t1 MTR_0242s0060 28.869 336 186 14 8 304 1 322 1.60e-18 87.0
MS.gene60027.t1 MTR_0242s0040 28.869 336 186 14 8 304 1 322 1.60e-18 87.0
MS.gene60027.t1 MTR_7g056760 28.235 340 189 15 9 310 15 337 1.68e-18 87.0
MS.gene60027.t1 MTR_4g117550 26.098 410 215 20 4 370 5 369 2.12e-18 86.3
MS.gene60027.t1 MTR_3g058480 30.741 270 140 13 14 258 37 284 2.62e-18 85.5
MS.gene60027.t1 MTR_0129s0070 25.359 418 253 15 1 379 2 399 3.15e-18 85.9
MS.gene60027.t1 MTR_3g006530 26.045 311 184 13 14 302 38 324 3.15e-18 85.9
MS.gene60027.t1 MTR_4g028660 26.118 425 229 21 1 370 1 395 3.93e-18 85.9
MS.gene60027.t1 MTR_4g027450 26.118 425 229 21 1 370 1 395 3.93e-18 85.9
MS.gene60027.t1 MTR_0064s0160 26.108 406 233 17 15 375 41 424 4.06e-18 85.9
MS.gene60027.t1 MTR_3g010620 27.479 353 220 14 14 361 34 355 4.31e-18 85.5
MS.gene60027.t1 MTR_4g028680 26.747 415 240 18 1 370 1 396 4.35e-18 85.5
MS.gene60027.t1 MTR_4g080200 28.173 323 171 13 16 312 3 290 4.66e-18 85.1
MS.gene60027.t1 MTR_6g048140 29.739 306 179 12 14 302 37 323 5.23e-18 85.5
MS.gene60027.t1 MTR_6g086825 27.184 412 224 19 11 368 65 454 5.41e-18 85.9
MS.gene60027.t1 MTR_1g442850 28.267 329 164 15 15 302 4 301 8.58e-18 84.3
MS.gene60027.t1 MTR_8g012090 26.393 341 185 15 15 326 15 318 1.19e-17 83.6
MS.gene60027.t1 MTR_7g078040 30.086 349 184 15 8 307 1 338 1.72e-17 84.0
MS.gene60027.t1 MTR_0054s0090 24.510 408 235 17 15 370 16 402 1.88e-17 84.0
MS.gene60027.t1 MTR_7g050480 28.528 326 161 15 15 302 21 312 1.93e-17 83.6
MS.gene60027.t1 MTR_5g048160 24.615 325 198 10 16 302 4 319 3.05e-17 83.2
MS.gene60027.t1 MTR_5g008530 70.175 57 15 1 16 72 18 72 3.50e-17 75.9
MS.gene60027.t1 MTR_8g046310 25.564 399 245 16 1 371 1 375 3.87e-17 82.4
MS.gene60027.t1 MTR_0267s0050 27.147 361 191 15 19 331 9 345 3.99e-17 82.8
MS.gene60027.t1 MTR_1g061330 25.062 403 234 15 16 385 4 371 4.08e-17 82.8
MS.gene60027.t1 MTR_6g013270 27.358 318 196 12 4 304 17 316 4.35e-17 82.4
MS.gene60027.t1 MTR_6g478230 25.481 416 232 17 3 368 14 401 5.21e-17 82.4
MS.gene60027.t1 MTR_2g021800 26.882 372 197 15 15 326 15 371 5.76e-17 82.4
MS.gene60027.t1 MTR_0115s0020 24.311 399 245 16 16 370 10 395 6.69e-17 82.0
MS.gene60027.t1 MTR_4g013180 26.970 330 189 11 15 310 10 321 6.80e-17 82.4
MS.gene60027.t1 MTR_5g069390 24.344 419 248 19 12 379 22 422 9.13e-17 82.0
MS.gene60027.t1 MTR_5g022045 26.113 337 184 15 16 308 35 350 9.70e-17 82.0
MS.gene60027.t1 MTR_7g017130 25.074 339 182 12 16 306 18 332 9.73e-17 81.6
MS.gene60027.t1 MTR_7g017170 25.074 339 182 12 16 306 18 332 9.85e-17 81.6
MS.gene60027.t1 MTR_8g464770 26.185 401 234 19 7 371 3 377 1.04e-16 81.3
MS.gene60027.t1 MTR_2g104340 24.444 405 232 12 15 370 13 392 1.07e-16 81.3
MS.gene60027.t1 MTR_0128s0070 27.778 324 186 14 16 310 22 326 1.08e-16 81.3
MS.gene60027.t1 MTR_3g013950 27.340 406 214 19 19 371 9 386 1.10e-16 81.3
MS.gene60027.t1 MTR_7g061060 27.414 321 178 12 15 302 12 310 1.25e-16 81.3
MS.gene60027.t1 MTR_2g043400 30.061 326 178 12 16 307 23 332 1.47e-16 81.3
MS.gene60027.t1 MTR_7g052150 27.245 323 174 15 16 304 22 317 1.57e-16 80.9
MS.gene60027.t1 MTR_1g088120 26.946 334 193 11 15 310 9 329 1.66e-16 80.9
MS.gene60027.t1 MTR_1g055070 28.309 272 151 10 16 258 49 305 1.77e-16 80.9
MS.gene60027.t1 MTR_4g006270 27.869 305 160 13 16 300 4 268 2.17e-16 80.5
MS.gene60027.t1 MTR_5g022040 24.377 361 196 13 16 308 40 391 2.36e-16 80.9
MS.gene60027.t1 MTR_7g079640 26.923 364 216 18 4 339 1 342 2.66e-16 80.1
MS.gene60027.t1 MTR_5g046260 26.287 369 186 17 14 369 2 297 2.67e-16 79.3
MS.gene60027.t1 MTR_7g013590 30.097 309 164 13 19 302 39 320 2.86e-16 80.1
MS.gene60027.t1 MTR_5g022090 28.483 323 171 14 16 318 34 316 3.22e-16 80.1
MS.gene60027.t1 MTR_7g055977 27.083 336 179 14 8 307 1 306 3.58e-16 79.7
MS.gene60027.t1 MTR_1g115185 27.707 314 178 13 14 304 37 324 3.81e-16 79.7
MS.gene60027.t1 MTR_5g097680 25.676 370 191 13 8 306 9 365 3.87e-16 80.1
MS.gene60027.t1 MTR_5g068040 28.485 330 163 13 16 310 16 307 4.47e-16 79.3
MS.gene60027.t1 MTR_6g017280 27.003 337 169 17 16 307 9 313 5.88e-16 79.3
MS.gene60027.t1 MTR_7g055870 26.932 427 224 20 16 369 13 424 5.90e-16 79.3
MS.gene60027.t1 MTR_7g066000 28.101 395 226 20 15 368 24 401 6.10e-16 79.3
MS.gene60027.t1 MTR_7g062100 27.245 323 172 13 16 302 24 319 6.25e-16 79.3
MS.gene60027.t1 MTR_5g069930 26.611 357 202 16 15 332 5 340 6.80e-16 79.0
MS.gene60027.t1 MTR_2g066200 25.212 353 201 13 15 326 11 341 7.48e-16 79.0
MS.gene60027.t1 MTR_3g023940 25.600 375 237 17 14 369 32 383 8.81e-16 78.6
MS.gene60027.t1 MTR_6g461660 26.667 345 182 13 10 305 13 335 9.09e-16 78.6
MS.gene60027.t1 MTR_2g461450 27.393 303 175 11 16 302 18 291 9.26e-16 78.2
MS.gene60027.t1 MTR_4g024890 26.101 318 184 13 15 302 9 305 9.43e-16 78.6
MS.gene60027.t1 MTR_7g017040 24.769 432 225 20 1 370 1 394 1.08e-15 78.6
MS.gene60027.t1 MTR_4g033495 25.956 366 196 16 16 330 27 368 1.13e-15 78.6
MS.gene60027.t1 MTR_3g096250 28.188 298 150 13 14 302 45 287 1.29e-15 77.8
MS.gene60027.t1 MTR_2g043410 29.022 317 193 10 16 307 22 331 1.49e-15 78.2
MS.gene60027.t1 MTR_4g028750 26.542 373 205 19 1 326 1 351 1.63e-15 77.8
MS.gene60027.t1 MTR_7g055930 26.698 427 225 20 16 369 13 424 1.69e-15 78.2
MS.gene60027.t1 MTR_5g023570 40.164 122 50 5 15 133 36 137 1.75e-15 73.6
MS.gene60027.t1 MTR_2g025960 28.182 220 112 9 124 306 5 215 1.93e-15 76.6
MS.gene60027.t1 MTR_4g130330 25.728 412 220 18 12 367 3 384 1.97e-15 77.8
MS.gene60027.t1 MTR_5g096710 29.299 314 179 10 16 302 23 320 2.09e-15 77.4
MS.gene60027.t1 MTR_1g115160 26.059 307 178 12 15 304 21 295 2.17e-15 77.4
MS.gene60027.t1 MTR_1g055055 28.333 300 174 14 16 306 26 293 2.57e-15 76.6
MS.gene60027.t1 MTR_7g070440 25.148 338 175 13 13 307 4 306 2.87e-15 77.0
MS.gene60027.t1 MTR_3g011650 32.099 243 107 12 12 229 72 281 3.45e-15 75.9
MS.gene60027.t1 MTR_1g112930 26.774 310 172 18 14 301 23 299 3.94e-15 76.6
MS.gene60027.t1 MTR_6g048120 25.806 310 192 9 14 302 34 326 4.02e-15 76.6
MS.gene60027.t1 MTR_8g063370 24.107 336 197 14 24 326 32 342 4.48e-15 76.6
MS.gene60027.t1 MTR_3g437520 28.228 333 196 15 16 310 23 350 6.33e-15 76.6
MS.gene60027.t1 MTR_5g027370 23.529 340 197 16 20 321 33 347 6.36e-15 76.3
MS.gene60027.t1 MTR_5g092850 24.804 383 207 16 11 339 11 366 6.74e-15 76.3
MS.gene60027.t1 MTR_5g027330 23.529 340 197 16 20 321 44 358 7.09e-15 76.3
MS.gene60027.t1 MTR_0831s0010 26.087 414 213 20 15 375 49 422 7.18e-15 76.3
MS.gene60027.t1 MTR_2g006360 27.419 310 156 12 9 307 39 290 7.77e-15 75.5
MS.gene60027.t1 MTR_1g068905 27.843 255 135 10 16 257 4 222 8.29e-15 75.1
MS.gene60027.t1 MTR_0707s0020 25.285 439 230 21 15 372 25 446 9.51e-15 75.9
MS.gene60027.t1 MTR_5g057643 32.178 202 99 8 16 197 46 229 9.51e-15 74.3
MS.gene60027.t1 MTR_7g061090 26.398 322 192 14 15 302 21 331 1.05e-14 75.5
MS.gene60027.t1 MTR_5g022900 25.348 359 186 17 16 308 32 374 1.17e-14 75.9
MS.gene60027.t1 MTR_1g071010 25.826 333 194 14 8 307 7 319 1.21e-14 75.1
MS.gene60027.t1 MTR_4g019990 24.633 341 189 10 11 307 1 317 1.48e-14 75.1
MS.gene60027.t1 MTR_2g021950 26.902 368 183 20 15 326 15 352 1.55e-14 75.1
MS.gene60027.t1 MTR_3g058470 27.707 314 153 13 14 302 35 299 1.62e-14 74.7
MS.gene60027.t1 MTR_7g061050 26.269 335 181 15 13 310 10 315 1.64e-14 74.7
MS.gene60027.t1 MTR_7g050490 33.816 207 88 11 15 197 7 188 1.65e-14 72.0
MS.gene60027.t1 MTR_7g066100 27.439 328 182 14 15 302 10 321 1.70e-14 74.7
MS.gene60027.t1 MTR_6g034720 37.748 151 65 5 121 254 31 169 1.72e-14 72.4
MS.gene60027.t1 MTR_6g055210 27.219 338 176 16 10 301 16 329 1.83e-14 75.1
MS.gene60027.t1 MTR_3g010870 29.646 226 126 10 14 228 35 238 2.11e-14 73.9
MS.gene60027.t1 MTR_1g007410 25.076 331 190 12 15 302 21 336 2.96e-14 73.9
MS.gene60027.t1 MTR_8g467670 25.131 382 214 17 9 345 7 361 3.49e-14 73.9
MS.gene60027.t1 MTR_2g022000 25.824 364 210 14 15 326 15 370 4.45e-14 73.6
MS.gene60027.t1 MTR_7g062060 25.298 336 207 11 12 310 8 336 5.27e-14 73.2
MS.gene60027.t1 MTR_7g028660 27.554 323 187 12 15 307 10 315 5.94e-14 73.2
MS.gene60027.t1 MTR_7g066030 26.184 359 201 13 15 327 20 360 6.64e-14 73.2
MS.gene60027.t1 MTR_2g031700 26.357 258 134 11 11 245 1 225 6.88e-14 72.0
MS.gene60027.t1 MTR_0649s0020 25.693 397 232 16 16 369 11 387 7.38e-14 72.8
MS.gene60027.t1 MTR_1g053510 25.229 436 223 20 4 371 3 403 7.63e-14 72.8
MS.gene60027.t1 MTR_4g013185 27.586 348 185 15 15 310 9 341 1.04e-13 72.4
MS.gene60027.t1 MTR_3g009250 31.276 243 110 12 12 230 34 243 1.09e-13 70.9
MS.gene60027.t1 MTR_3g024040 24.422 303 178 11 22 307 37 305 1.18e-13 72.0
MS.gene60027.t1 MTR_4g030090 25.309 324 181 12 17 302 15 315 1.32e-13 72.0
MS.gene60027.t1 MTR_7g035295 26.366 421 207 18 3 369 8 379 1.42e-13 72.0
MS.gene60027.t1 MTR_4g030980 25.683 366 188 14 11 310 10 357 1.59e-13 72.0
MS.gene60027.t1 MTR_4g011660 27.300 337 178 18 16 302 19 338 1.68e-13 72.0
MS.gene60027.t1 MTR_7g056710 25.212 353 196 16 15 327 17 341 1.70e-13 71.6
MS.gene60027.t1 MTR_7g016930 27.164 335 154 18 15 303 15 305 2.02e-13 71.2
MS.gene60027.t1 MTR_8g063440 25.424 354 194 16 15 326 11 336 2.47e-13 71.2
MS.gene60027.t1 MTR_5g057040 30.049 203 102 9 16 197 46 229 2.83e-13 72.0
MS.gene60027.t1 MTR_5g043160 25.683 366 202 16 18 324 52 406 3.73e-13 70.9
MS.gene60027.t1 MTR_2g104280 23.474 426 242 16 4 370 1 401 3.97e-13 70.9
MS.gene60027.t1 MTR_1g057890 29.412 272 160 13 40 306 43 287 4.07e-13 70.5
MS.gene60027.t1 MTR_3g058440 27.839 273 138 13 16 258 35 278 4.58e-13 69.7
MS.gene60027.t1 MTR_6g086920 24.336 452 232 21 15 372 37 472 5.49e-13 70.5
MS.gene60027.t1 MTR_3g010440 23.701 308 144 10 14 307 24 254 5.56e-13 69.7
MS.gene60027.t1 MTR_7g079160 26.098 387 197 18 15 327 7 378 6.25e-13 70.5
MS.gene60027.t1 MTR_7g078840 26.437 348 189 12 15 307 9 344 7.42e-13 70.1
MS.gene60027.t1 MTR_2g078870 29.940 167 101 7 140 302 78 232 1.18e-12 68.6
MS.gene60027.t1 MTR_7g091630 24.773 331 194 13 15 307 31 344 1.66e-12 68.9
MS.gene60027.t1 MTR_2g047200 27.389 314 189 12 16 302 20 321 1.73e-12 68.6
MS.gene60027.t1 MTR_0097s0030 24.282 383 241 13 16 368 14 377 1.87e-12 68.6
MS.gene60027.t1 MTR_2g047240 24.282 383 241 13 16 368 14 377 1.87e-12 68.6
MS.gene60027.t1 MTR_7g056200 25.392 319 192 11 9 307 16 308 2.24e-12 68.2
MS.gene60027.t1 MTR_6g079810 25.330 379 193 18 11 326 65 416 3.27e-12 68.2
MS.gene60027.t1 MTR_8g063310 23.308 399 237 16 15 370 21 393 3.48e-12 67.8
MS.gene60027.t1 MTR_2g010920 25.581 344 185 14 19 307 23 350 3.89e-12 67.8
MS.gene60027.t1 MTR_6g092560 22.518 413 238 17 16 372 12 398 3.97e-12 67.8
MS.gene60027.t1 MTR_6g016285 26.126 333 177 12 16 302 21 330 4.27e-12 67.8
MS.gene60027.t1 MTR_7g078050 33.735 166 82 7 16 177 6 147 5.21e-12 65.9
MS.gene60027.t1 MTR_2g047892 26.032 315 190 15 16 302 22 321 5.42e-12 67.0
MS.gene60027.t1 MTR_7g056503 23.500 400 239 15 15 369 20 397 5.75e-12 67.0
MS.gene60027.t1 MTR_4g102410 26.408 284 160 10 15 260 60 332 6.29e-12 67.0
MS.gene60027.t1 MTR_1g055065 30.198 202 119 10 124 306 20 218 6.87e-12 65.9
MS.gene60027.t1 MTR_8g066440 24.641 418 222 18 12 370 19 402 7.04e-12 67.0
MS.gene60027.t1 MTR_3g083660 30.693 202 113 10 112 302 21 206 8.12e-12 65.9
MS.gene60027.t1 MTR_3g030350 28.571 308 173 14 14 302 33 312 8.38e-12 66.6
MS.gene60027.t1 MTR_5g086590 24.153 236 120 9 140 336 16 231 9.57e-12 64.7
MS.gene60027.t1 MTR_4g013175 27.248 367 177 16 8 310 1 341 9.59e-12 66.6
MS.gene60027.t1 MTR_4g134560 28.125 192 111 8 139 317 195 372 1.05e-11 66.6
MS.gene60027.t1 MTR_1g007450 26.036 338 203 12 7 306 3 331 1.11e-11 66.2
MS.gene60027.t1 MTR_0128s0010 25.392 319 190 12 14 302 19 319 1.14e-11 66.2
MS.gene60027.t1 MTR_3g006300 54.000 50 23 0 7 56 21 70 1.15e-11 60.8
MS.gene60027.t1 MTR_6g004210 27.463 335 187 16 27 322 36 353 1.28e-11 66.2
MS.gene60027.t1 MTR_5g097350 25.072 347 185 15 25 326 25 341 1.74e-11 65.5
MS.gene60027.t1 MTR_4g030110 28.070 342 165 19 6 307 19 319 1.80e-11 65.5
MS.gene60027.t1 MTR_7g066060 25.298 336 175 15 15 302 22 329 2.19e-11 65.9
MS.gene60027.t1 MTR_5g096900 27.338 278 146 15 15 256 11 268 2.76e-11 64.7
MS.gene60027.t1 MTR_3g009300 26.471 306 155 14 19 307 37 289 3.32e-11 64.7
MS.gene60027.t1 MTR_3g096280 26.190 294 156 14 28 302 17 268 3.36e-11 64.3
MS.gene60027.t1 MTR_7g056737 24.850 334 185 13 12 310 18 320 3.55e-11 64.7
MS.gene60027.t1 MTR_4g024870 27.547 265 142 12 1 238 27 268 3.72e-11 64.7
MS.gene60027.t1 MTR_7g056797 30.698 215 98 9 15 197 22 217 4.17e-11 64.3
MS.gene60027.t1 MTR_7g061010 26.524 328 168 13 16 304 22 315 4.62e-11 64.3
MS.gene60027.t1 MTR_3g007380 33.333 147 75 5 19 159 33 162 7.21e-11 62.0
MS.gene60027.t1 MTR_7g111700 24.202 376 237 14 15 370 14 361 7.53e-11 63.5
MS.gene60027.t1 MTR_8g013005 55.556 54 23 1 318 371 1 53 7.76e-11 57.8
MS.gene60027.t1 MTR_7g077070 25.872 344 201 17 3 302 4 337 7.84e-11 63.9
MS.gene60027.t1 MTR_4g031020 23.729 354 200 12 16 310 15 357 8.30e-11 63.5
MS.gene60027.t1 MTR_7g078900 23.631 347 206 13 6 307 2 334 8.35e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60027.t1 AT3G06240 27.561 410 232 16 9 369 26 419 1.01e-27 113
MS.gene60027.t1 AT3G23880 28.704 324 179 12 6 304 3 299 2.44e-21 94.7
MS.gene60027.t1 AT4G12560 28.024 339 177 15 16 316 4 313 5.25e-20 91.3
MS.gene60027.t1 AT4G12560 28.024 339 177 15 16 316 4 313 5.25e-20 91.3
MS.gene60027.t1 AT4G12560 28.024 339 177 15 16 316 4 313 5.25e-20 91.3
MS.gene60027.t1 AT4G22390 26.706 337 193 14 17 322 5 318 7.68e-16 79.0
MS.gene60027.t1 AT4G22390 26.706 337 193 14 17 322 5 318 9.10e-16 78.6
MS.gene60027.t1 AT2G40925 24.545 330 174 13 16 306 27 320 1.67e-14 75.1
MS.gene60027.t1 AT1G71320 23.754 341 200 10 15 309 13 339 2.92e-14 73.9
MS.gene60027.t1 AT3G16210 25.566 309 172 15 15 307 4 270 3.41e-14 73.6
MS.gene60027.t1 AT1G11620 25.392 319 193 16 16 315 6 298 9.67e-13 69.3
MS.gene60027.t1 AT3G17490 27.097 310 175 14 14 301 4 284 1.18e-12 69.3
MS.gene60027.t1 AT1G12870 22.775 382 224 20 11 351 28 379 2.14e-12 68.6
MS.gene60027.t1 AT2G40910 23.853 327 183 14 16 306 69 365 2.52e-12 68.6
MS.gene60027.t1 AT2G40920 24.695 328 173 14 21 306 59 354 2.53e-12 68.6
MS.gene60027.t1 AT1G30790 24.438 356 211 15 15 334 8 341 2.64e-12 68.2
MS.gene60027.t1 AT2G40910 23.853 327 183 14 16 306 62 358 2.79e-12 68.2
MS.gene60027.t1 AT1G47790 26.587 252 161 8 17 262 26 259 3.59e-12 67.8
MS.gene60027.t1 AT2G40920 24.847 326 171 14 23 306 2 295 4.20e-12 67.4
MS.gene60027.t1 AT1G47340 25.806 341 202 15 16 329 6 322 5.22e-12 67.4
MS.gene60027.t1 AT1G47340 25.806 341 202 15 16 329 6 322 5.22e-12 67.4
MS.gene60027.t1 AT4G19940 23.496 349 208 12 14 327 33 357 5.58e-12 67.4
MS.gene60027.t1 AT3G16590 27.465 284 148 14 16 273 5 256 6.30e-12 67.0
MS.gene60027.t1 AT1G47340 25.806 341 202 15 16 329 37 353 6.35e-12 67.4
MS.gene60027.t1 AT4G19930 23.262 374 212 15 14 345 41 381 7.28e-12 67.0
MS.gene60027.t1 AT3G10240 23.026 304 183 12 16 299 27 299 1.47e-11 65.9
MS.gene60027.t1 AT2G04920 26.277 274 153 12 16 271 4 246 2.12e-11 65.5
MS.gene60027.t1 AT5G62510 24.841 314 191 10 14 305 42 332 4.07e-11 64.7
MS.gene60027.t1 AT3G59610 27.397 292 167 15 16 293 8 268 4.76e-11 64.7
MS.gene60027.t1 AT3G21120 21.723 267 158 11 15 256 2 242 7.37e-11 63.5
MS.gene60027.t1 AT1G50870 27.490 251 152 10 17 256 32 263 8.74e-11 63.5

Find 88 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTGCCTTTGATTTAA+TGG 0.091455 4.3:+86449507 MS.gene60027:CDS
GTTCTACGGATTGTGATTTA+TGG 0.160380 4.3:+86449575 MS.gene60027:CDS
CTGGTAACCTCATTAGGATT+TGG 0.235244 4.3:-86448856 None:intergenic
GTTGCAACAGATTGCGTTAC+TGG 0.249085 4.3:+86449769 MS.gene60027:CDS
TTAGAGGATTTCTAAGTCTA+TGG 0.269614 4.3:+86449602 MS.gene60027:CDS
TTTGTTTAAACGCTTATATA+TGG 0.301351 4.3:+86449191 MS.gene60027:CDS
GGCGGAGGTGGCGGAGCTTA+TGG 0.311842 4.3:+86448793 MS.gene60027:CDS
ACTTAACTGGTAACCTCATT+AGG 0.314398 4.3:-86448862 None:intergenic
TGAATATCAAAATGAGATTC+TGG 0.316430 4.3:-86449130 None:intergenic
ACGAGTATACGGTTGATATA+TGG 0.318993 4.3:+86449635 MS.gene60027:CDS
GAACGATAATCAATATAATC+TGG 0.340564 4.3:-86449556 None:intergenic
TTCTACGGATTGTGATTTAT+GGG 0.343642 4.3:+86449576 MS.gene60027:CDS
AAATTGAAACTGTGGATTTA+CGG 0.345238 4.3:-86449005 None:intergenic
AAACTTAAATCTGAAACATT+TGG 0.350341 4.3:-86449253 None:intergenic
AAACTAGGGTTGAGTGTAAC+AGG 0.353521 4.3:-86449100 None:intergenic
TGTGATTTATGGGTATTTAG+AGG 0.359497 4.3:+86449586 MS.gene60027:CDS
AAATCTATAGATCGAAATTC+AGG 0.360952 4.3:-86449046 None:intergenic
TGGTAACCTCATTAGGATTT+GGG 0.365671 4.3:-86448855 None:intergenic
ATTTCTAAGTCTATGGGTTA+TGG 0.375932 4.3:+86449609 MS.gene60027:CDS
TATTGCAAAGATTCACGAAA+TGG 0.386661 4.3:+86449838 MS.gene60027:CDS
GGTTATGGTGGACGAGTATA+CGG 0.392883 4.3:+86449624 MS.gene60027:CDS
AAACGAATAAGAGACTTAAC+TGG 0.393097 4.3:-86448875 None:intergenic
CGAGTATACGGTTGATATAT+GGG 0.394457 4.3:+86449636 MS.gene60027:CDS
TCGTGAATCTTTGCAATAGT+TGG 0.395158 4.3:-86449833 None:intergenic
ATTGAAGACCGCCTCTACTA+AGG 0.411533 4.3:-86449437 None:intergenic
GAGGCAGCCTTACTACAAAA+AGG 0.416722 4.3:-86449400 None:intergenic
AATACAAAGTGCAGTCATCT+TGG 0.424763 4.3:+86449668 MS.gene60027:CDS
GGAGCTTATGGCGGAGGTGG+CGG 0.430233 4.3:+86448805 MS.gene60027:CDS
CAATGGAGCTATTCACTGGT+TGG 0.445876 4.3:+86449456 MS.gene60027:CDS
TCTCACTCAGAGCTAATGAA+TGG 0.447110 4.3:+86449350 MS.gene60027:CDS
AGGAAGACGCATGGCGGAGG+TGG 0.448131 4.3:+86448781 None:intergenic
TTAGTAGAGGCGGTCTTCAA+TGG 0.454485 4.3:+86449439 MS.gene60027:CDS
ACTACTGATGATACCATTGA+TGG 0.457074 4.3:+86449709 MS.gene60027:CDS
GGCGGAGCTTATGGCGGAGG+TGG 0.465178 4.3:+86448802 MS.gene60027:CDS
CGTTCAACTTGTTTGTGCCA+TGG 0.466466 4.3:-86449901 None:intergenic
GTTCAACTTGTTTGTGCCAT+GGG 0.467055 4.3:-86449900 None:intergenic
AAGACGCATGGCGGAGGTGG+CGG 0.468038 4.3:+86448784 None:intergenic
TCAAAATGAGATTCTGGAAG+TGG 0.472706 4.3:-86449124 None:intergenic
TTTCCTTTCCATTAAATCAA+AGG 0.478785 4.3:-86449515 None:intergenic
TTATATTGATTATCGTTCTA+CGG 0.481902 4.3:+86449561 MS.gene60027:CDS
GATTCTGGAAGTGGAAAACT+AGG 0.484539 4.3:-86449115 None:intergenic
TCAAATCCGTTTGTAAGTCA+TGG 0.484548 4.3:+86448897 MS.gene60027:CDS
AGGTATTTGTCTATGAAATC+CGG 0.492203 4.3:-86449224 None:intergenic
CAGCTTCGTATGATTACTTG+TGG 0.493910 4.3:+86449323 MS.gene60027:CDS
TAGAGGATTTCTAAGTCTAT+GGG 0.497173 4.3:+86449603 MS.gene60027:CDS
ATTTGGGTGATCAATTCATC+AGG 0.500913 4.3:-86448839 None:intergenic
CGAATCAAAAGACGATTACT+TGG 0.504732 4.3:+86449294 MS.gene60027:CDS
AATTATAAATATCTAGAAAA+CGG 0.507758 4.3:-86449947 None:intergenic
TACAGGAGAAACACCATCAA+TGG 0.509381 4.3:-86449722 None:intergenic
ATCAATTCATCAGGCAGATA+CGG 0.511263 4.3:-86448830 None:intergenic
CTCACTCAGAGCTAATGAAT+GGG 0.511679 4.3:+86449351 MS.gene60027:CDS
TCTTCAATGGAGCTATTCAC+TGG 0.513798 4.3:+86449452 MS.gene60027:CDS
TCTGAAACATTTGGAGGGAA+AGG 0.514225 4.3:-86449244 None:intergenic
CTTAAATCTGAAACATTTGG+AGG 0.514840 4.3:-86449250 None:intergenic
AACAGATTGCGTTACTGGAT+TGG 0.516231 4.3:+86449774 MS.gene60027:CDS
AACGATAATCAATATAATCT+GGG 0.521949 4.3:-86449555 None:intergenic
AATTTAAAGGTTCATGTAGA+GGG 0.524355 4.3:+86449152 MS.gene60027:CDS
TTGCCTTTGATTTAATGGAA+AGG 0.533360 4.3:+86449512 MS.gene60027:CDS
ATCAAAAGACGATTACTTGG+TGG 0.533471 4.3:+86449297 MS.gene60027:CDS
AGTCTTTGCTTTCACTCCCA+TGG 0.535002 4.3:+86449884 MS.gene60027:CDS
TTGAAGACCGCCTCTACTAA+GGG 0.537668 4.3:-86449436 None:intergenic
CAATTTAAAGGTTCATGTAG+AGG 0.537697 4.3:+86449151 MS.gene60027:CDS
TCTACGAGTGTGTGTTGAAG+AGG 0.539919 4.3:-86448969 None:intergenic
GGTGGCGGAGCTTATGGCGG+AGG 0.543402 4.3:+86448799 MS.gene60027:CDS
TGTCTATGAAATCCGGTGGA+TGG 0.546054 4.3:-86449217 None:intergenic
CAGAGGAAGACGCATGGCGG+AGG 0.548295 4.3:+86448778 None:intergenic
TTCACGAAATGGATTCCGAT+TGG 0.548703 4.3:+86449849 MS.gene60027:CDS
AACAGGTTCATTATAATCAT+CGG 0.549286 4.3:-86449083 None:intergenic
AGAAAACCATGACTTACAAA+CGG 0.552831 4.3:-86448903 None:intergenic
CTCTACTAAGGGATAATCAA+AGG 0.556603 4.3:-86449425 None:intergenic
TAAGGGATAATCAAAGGAAG+AGG 0.560601 4.3:-86449419 None:intergenic
CTTTGATTATCCCTTAGTAG+AGG 0.564980 4.3:+86449426 MS.gene60027:CDS
ACTCTGTATACATAGCCAAT+CGG 0.573189 4.3:-86449864 None:intergenic
GAGAAGGCAAATTGAAACTG+TGG 0.577456 4.3:-86449013 None:intergenic
TTCAGGAGTAGTGTTTGAGA+AGG 0.583552 4.3:-86449029 None:intergenic
TGATCACCCAAATCCTAATG+AGG 0.585524 4.3:+86448849 MS.gene60027:CDS
TTAAATCTGAAACATTTGGA+GGG 0.588565 4.3:-86449249 None:intergenic
TATATATGGAATCCATCCAC+CGG 0.596418 4.3:+86449205 MS.gene60027:CDS
TCTAAGTCTATGGGTTATGG+TGG 0.598732 4.3:+86449612 MS.gene60027:CDS
TAATCAATATAATCTGGGAG+AGG 0.611373 4.3:-86449550 None:intergenic
TGATTATCCCTTAGTAGAGG+CGG 0.612867 4.3:+86449429 MS.gene60027:CDS
GGAGGTGGCGGAGCTTATGG+CGG 0.624050 4.3:+86448796 MS.gene60027:CDS
TAATCATCGGTAAACAATGA+CGG 0.624118 4.3:-86449070 None:intergenic
AAATATCTAGAAAACGGTGA+AGG 0.636667 4.3:-86449941 None:intergenic
TATTTGTCTATGAAATCCGG+TGG 0.647593 4.3:-86449221 None:intergenic
ATTCTGGAAGTGGAAAACTA+GGG 0.669310 4.3:-86449114 None:intergenic
TAATGAATGGGAAGAAATCG+TGG 0.669771 4.3:+86449363 MS.gene60027:CDS
TTGGTGAGATATGATGACAA+AGG 0.738918 4.3:+86449793 MS.gene60027:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAAGTTTTTATGGTTTT+GGG + chr4.3:86449266-86449285 MS.gene60027:CDS 15.0%
!!! CATTTTGATATTCAATTTAA+AGG + chr4.3:86449139-86449158 MS.gene60027:CDS 15.0%
!! AACGATAATCAATATAATCT+GGG - chr4.3:86449558-86449577 None:intergenic 20.0%
!! TTTGTTTAAACGCTTATATA+TGG + chr4.3:86449191-86449210 MS.gene60027:CDS 20.0%
!!! AAACTTAAATCTGAAACATT+TGG - chr4.3:86449256-86449275 None:intergenic 20.0%
!!! GATTTAAGTTTTTATGGTTT+TGG + chr4.3:86449265-86449284 MS.gene60027:CDS 20.0%
!!! GTTTCAGATTTAAGTTTTTA+TGG + chr4.3:86449259-86449278 MS.gene60027:CDS 20.0%
!!! TTATATTGATTATCGTTCTA+CGG + chr4.3:86449561-86449580 MS.gene60027:CDS 20.0%
! AAATCTATAGATCGAAATTC+AGG - chr4.3:86449049-86449068 None:intergenic 25.0%
! AAATTGAAACTGTGGATTTA+CGG - chr4.3:86449008-86449027 None:intergenic 25.0%
! AACAGGTTCATTATAATCAT+CGG - chr4.3:86449086-86449105 None:intergenic 25.0%
! AATTTAAAGGTTCATGTAGA+GGG + chr4.3:86449152-86449171 MS.gene60027:CDS 25.0%
! GAACGATAATCAATATAATC+TGG - chr4.3:86449559-86449578 None:intergenic 25.0%
! TGAATATCAAAATGAGATTC+TGG - chr4.3:86449133-86449152 None:intergenic 25.0%
! TTTCCTTTCCATTAAATCAA+AGG - chr4.3:86449518-86449537 None:intergenic 25.0%
!! TATTGTTGCCTTTGATTTAA+TGG + chr4.3:86449507-86449526 MS.gene60027:CDS 25.0%
!! TTAAATCTGAAACATTTGGA+GGG - chr4.3:86449252-86449271 None:intergenic 25.0%
AAACGAATAAGAGACTTAAC+TGG - chr4.3:86448878-86448897 None:intergenic 30.0%
AGAAAACCATGACTTACAAA+CGG - chr4.3:86448906-86448925 None:intergenic 30.0%
AGGTATTTGTCTATGAAATC+CGG - chr4.3:86449227-86449246 None:intergenic 30.0%
CAATTTAAAGGTTCATGTAG+AGG + chr4.3:86449151-86449170 MS.gene60027:CDS 30.0%
TAATCAATATAATCTGGGAG+AGG - chr4.3:86449553-86449572 None:intergenic 30.0%
TAATCATCGGTAAACAATGA+CGG - chr4.3:86449073-86449092 None:intergenic 30.0%
TAGAGGATTTCTAAGTCTAT+GGG + chr4.3:86449603-86449622 MS.gene60027:CDS 30.0%
TATTGCAAAGATTCACGAAA+TGG + chr4.3:86449838-86449857 MS.gene60027:CDS 30.0%
TGTGATTTATGGGTATTTAG+AGG + chr4.3:86449586-86449605 MS.gene60027:CDS 30.0%
TTAGAGGATTTCTAAGTCTA+TGG + chr4.3:86449602-86449621 MS.gene60027:CDS 30.0%
! ATTTCTAAGTCTATGGGTTA+TGG + chr4.3:86449609-86449628 MS.gene60027:CDS 30.0%
! CTTAAATCTGAAACATTTGG+AGG - chr4.3:86449253-86449272 None:intergenic 30.0%
! TTCTACGGATTGTGATTTAT+GGG + chr4.3:86449576-86449595 MS.gene60027:CDS 30.0%
! TTGCCTTTGATTTAATGGAA+AGG + chr4.3:86449512-86449531 MS.gene60027:CDS 30.0%
AATACAAAGTGCAGTCATCT+TGG + chr4.3:86449668-86449687 MS.gene60027:CDS 35.0%
ACTACTGATGATACCATTGA+TGG + chr4.3:86449709-86449728 MS.gene60027:CDS 35.0%
ACTCTGTATACATAGCCAAT+CGG - chr4.3:86449867-86449886 None:intergenic 35.0%
ACTTAACTGGTAACCTCATT+AGG - chr4.3:86448865-86448884 None:intergenic 35.0%
ATCAAAAGACGATTACTTGG+TGG + chr4.3:86449297-86449316 MS.gene60027:CDS 35.0%
ATCAATTCATCAGGCAGATA+CGG - chr4.3:86448833-86448852 None:intergenic 35.0%
ATTTGGGTGATCAATTCATC+AGG - chr4.3:86448842-86448861 None:intergenic 35.0%
CCTTACTACAAAAAGGCAAA+TGG - chr4.3:86449396-86449415 None:intergenic 35.0%
CGAATCAAAAGACGATTACT+TGG + chr4.3:86449294-86449313 MS.gene60027:CDS 35.0%
CTCTACTAAGGGATAATCAA+AGG - chr4.3:86449428-86449447 None:intergenic 35.0%
CTTTGATTATCCCTTAGTAG+AGG + chr4.3:86449426-86449445 MS.gene60027:CDS 35.0%
TAAGGGATAATCAAAGGAAG+AGG - chr4.3:86449422-86449441 None:intergenic 35.0%
TAATGAATGGGAAGAAATCG+TGG + chr4.3:86449363-86449382 MS.gene60027:CDS 35.0%
TATATATGGAATCCATCCAC+CGG + chr4.3:86449205-86449224 MS.gene60027:CDS 35.0%
TATTTGTCTATGAAATCCGG+TGG - chr4.3:86449224-86449243 None:intergenic 35.0%
TCAAATCCGTTTGTAAGTCA+TGG + chr4.3:86448897-86448916 MS.gene60027:CDS 35.0%
TCGTGAATCTTTGCAATAGT+TGG - chr4.3:86449836-86449855 None:intergenic 35.0%
TGGTAACCTCATTAGGATTT+GGG - chr4.3:86448858-86448877 None:intergenic 35.0%
TTGGTGAGATATGATGACAA+AGG + chr4.3:86449793-86449812 MS.gene60027:CDS 35.0%
! ACGAGTATACGGTTGATATA+TGG + chr4.3:86449635-86449654 MS.gene60027:CDS 35.0%
! ATTCTGGAAGTGGAAAACTA+GGG - chr4.3:86449117-86449136 None:intergenic 35.0%
! CCATTTGCCTTTTTGTAGTA+AGG + chr4.3:86449393-86449412 MS.gene60027:CDS 35.0%
! CGAGTATACGGTTGATATAT+GGG + chr4.3:86449636-86449655 MS.gene60027:CDS 35.0%
! GTTCTACGGATTGTGATTTA+TGG + chr4.3:86449575-86449594 MS.gene60027:CDS 35.0%
! TCAAAATGAGATTCTGGAAG+TGG - chr4.3:86449127-86449146 None:intergenic 35.0%
AAACTAGGGTTGAGTGTAAC+AGG - chr4.3:86449103-86449122 None:intergenic 40.0%
AACAGATTGCGTTACTGGAT+TGG + chr4.3:86449774-86449793 MS.gene60027:CDS 40.0%
CAGCTTCGTATGATTACTTG+TGG + chr4.3:86449323-86449342 MS.gene60027:CDS 40.0%
CCTGTATGTTGCAGAAAAAG+TGG + chr4.3:86449739-86449758 MS.gene60027:CDS 40.0%
CTCACTCAGAGCTAATGAAT+GGG + chr4.3:86449351-86449370 MS.gene60027:CDS 40.0%
CTGGTAACCTCATTAGGATT+TGG - chr4.3:86448859-86448878 None:intergenic 40.0%
GAGAAGGCAAATTGAAACTG+TGG - chr4.3:86449016-86449035 None:intergenic 40.0%
TACAGGAGAAACACCATCAA+TGG - chr4.3:86449725-86449744 None:intergenic 40.0%
TCTCACTCAGAGCTAATGAA+TGG + chr4.3:86449350-86449369 MS.gene60027:CDS 40.0%
TCTTCAATGGAGCTATTCAC+TGG + chr4.3:86449452-86449471 MS.gene60027:CDS 40.0%
TGATCACCCAAATCCTAATG+AGG + chr4.3:86448849-86448868 MS.gene60027:CDS 40.0%
TGATTATCCCTTAGTAGAGG+CGG + chr4.3:86449429-86449448 MS.gene60027:CDS 40.0%
TTCAGGAGTAGTGTTTGAGA+AGG - chr4.3:86449032-86449051 None:intergenic 40.0%
! GATTCTGGAAGTGGAAAACT+AGG - chr4.3:86449118-86449137 None:intergenic 40.0%
! GTTCAACTTGTTTGTGCCAT+GGG - chr4.3:86449903-86449922 None:intergenic 40.0%
! TCTAAGTCTATGGGTTATGG+TGG + chr4.3:86449612-86449631 MS.gene60027:CDS 40.0%
! TCTGAAACATTTGGAGGGAA+AGG - chr4.3:86449247-86449266 None:intergenic 40.0%
! TTCACGAAATGGATTCCGAT+TGG + chr4.3:86449849-86449868 MS.gene60027:CDS 40.0%
!!! CCACTTTTTCTGCAACATAC+AGG - chr4.3:86449742-86449761 None:intergenic 40.0%
AGTCTTTGCTTTCACTCCCA+TGG + chr4.3:86449884-86449903 MS.gene60027:CDS 45.0%
ATTGAAGACCGCCTCTACTA+AGG - chr4.3:86449440-86449459 None:intergenic 45.0%
CAATGGAGCTATTCACTGGT+TGG + chr4.3:86449456-86449475 MS.gene60027:CDS 45.0%
GAGGCAGCCTTACTACAAAA+AGG - chr4.3:86449403-86449422 None:intergenic 45.0%
GTTGCAACAGATTGCGTTAC+TGG + chr4.3:86449769-86449788 MS.gene60027:CDS 45.0%
TCTACGAGTGTGTGTTGAAG+AGG - chr4.3:86448972-86448991 None:intergenic 45.0%
TGTCTATGAAATCCGGTGGA+TGG - chr4.3:86449220-86449239 None:intergenic 45.0%
TTAGTAGAGGCGGTCTTCAA+TGG + chr4.3:86449439-86449458 MS.gene60027:CDS 45.0%
TTGAAGACCGCCTCTACTAA+GGG - chr4.3:86449439-86449458 None:intergenic 45.0%
! CGTTCAACTTGTTTGTGCCA+TGG - chr4.3:86449904-86449923 None:intergenic 45.0%
!! GGTTATGGTGGACGAGTATA+CGG + chr4.3:86449624-86449643 MS.gene60027:CDS 45.0%
! GGAGCTTATGGCGGAGGTGG+CGG + chr4.3:86448805-86448824 MS.gene60027:CDS 65.0%
!! GGAGGTGGCGGAGCTTATGG+CGG + chr4.3:86448796-86448815 MS.gene60027:CDS 65.0%
! GGCGGAGCTTATGGCGGAGG+TGG + chr4.3:86448802-86448821 MS.gene60027:CDS 70.0%
!! GGCGGAGGTGGCGGAGCTTA+TGG + chr4.3:86448793-86448812 MS.gene60027:CDS 70.0%
!! GGTGGCGGAGCTTATGGCGG+AGG + chr4.3:86448799-86448818 MS.gene60027:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 86448791 86449957 86448791 ID=MS.gene60027
chr4.3 mRNA 86448791 86449957 86448791 ID=MS.gene60027.t1;Parent=MS.gene60027
chr4.3 exon 86448791 86449957 86448791 ID=MS.gene60027.t1.exon1;Parent=MS.gene60027.t1
chr4.3 CDS 86448791 86449957 86448791 ID=cds.MS.gene60027.t1;Parent=MS.gene60027.t1
Gene Sequence

>MS.gene60027

ATGGCGGAGGTGGCGGAGCTTATGGCGGAGGTGGCGGAACCGTATCTGCCTGATGAATTGATCACCCAAATCCTAATGAGGTTACCAGTTAAGTCTCTTATTCGTTTCAAATCCGTTTGTAAGTCATGGTTTTCTCTTATCTCTGATAATCACTTTGCAAATTCACATTTTCAACTTACCTCTTCAACACACACTCGTAGAATTCTCTTCTTAACCGTAAATCCACAGTTTCAATTTGCCTTCTCAAACACTACTCCTGAATTTCGATCTATAGATTTACCGTCATTGTTTACCGATGATTATAATGAACCTGTTACACTCAACCCTAGTTTTCCACTTCCAGAATCTCATTTTGATATTCAATTTAAAGGTTCATGTAGAGGGTTTATACTTTTGCACATTTGTTTAAACGCTTATATATGGAATCCATCCACCGGATTTCATAGACAAATACCTTTCCCTCCAAATGTTTCAGATTTAAGTTTTTATGGTTTTGGGTATGACGAATCAAAAGACGATTACTTGGTGGTTTCAGCTTCGTATGATTACTTGTGGATTTTCTCACTCAGAGCTAATGAATGGGAAGAAATCGTGGATGCTCTCCATTTGCCTTTTTGTAGTAAGGCTGCCTCTTCCTTTGATTATCCCTTAGTAGAGGCGGTCTTCAATGGAGCTATTCACTGGTTGGCTTTTTGTCGTGATACTCGTGAATATATTATTGTTGCCTTTGATTTAATGGAAAGGAAACTTGTAGAGATTCCTCTCCCAGATTATATTGATTATCGTTCTACGGATTGTGATTTATGGGTATTTAGAGGATTTCTAAGTCTATGGGTTATGGTGGACGAGTATACGGTTGATATATGGGTAATGAAAGAATACAAAGTGCAGTCATCTTGGACTAAAACTCTTGTTCTTACTACTGATGATACCATTGATGGTGTTTCTCCTGTATGTTGCAGAAAAAGTGGTGATATTGTTGCAACAGATTGCGTTACTGGATTGGTGAGATATGATGACAAAGGAGAGTTTTTAGAGCATACCAACTATTGCAAAGATTCACGAAATGGATTCCGATTGGCTATGTATACAGAGTCTTTGCTTTCACTCCCATGGCACAAACAAGTTGAACGAGTTAGTTATATTTTCTCCTTCACCGTTTTCTAG

Protein sequence

>MS.gene60027.t1

MAEVAELMAEVAEPYLPDELITQILMRLPVKSLIRFKSVCKSWFSLISDNHFANSHFQLTSSTHTRRILFLTVNPQFQFAFSNTTPEFRSIDLPSLFTDDYNEPVTLNPSFPLPESHFDIQFKGSCRGFILLHICLNAYIWNPSTGFHRQIPFPPNVSDLSFYGFGYDESKDDYLVVSASYDYLWIFSLRANEWEEIVDALHLPFCSKAASSFDYPLVEAVFNGAIHWLAFCRDTREYIIVAFDLMERKLVEIPLPDYIDYRSTDCDLWVFRGFLSLWVMVDEYTVDIWVMKEYKVQSSWTKTLVLTTDDTIDGVSPVCCRKSGDIVATDCVTGLVRYDDKGEFLEHTNYCKDSRNGFRLAMYTESLLSLPWHKQVERVSYIFSFTVF