Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036664.t1 | AES91690.1 | 94.7 | 225 | 12 | 0 | 25 | 249 | 34 | 258 | 1.80E-124 | 455.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036664.t1 | Q9SU30 | 27.6 | 214 | 131 | 8 | 3 | 193 | 110 | 322 | 7.3e-13 | 75.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036664.t1 | G7JGN0 | 94.7 | 225 | 12 | 0 | 25 | 249 | 34 | 258 | 1.3e-124 | 455.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036664.t1 | MTR_4g116320 | 94.444 | 216 | 12 | 0 | 34 | 249 | 43 | 258 | 4.58e-152 | 424 |
MS.gene036664.t1 | MTR_4g116330 | 63.855 | 249 | 83 | 3 | 1 | 247 | 135 | 378 | 2.21e-103 | 305 |
MS.gene036664.t1 | MTR_3g103020 | 62.451 | 253 | 82 | 5 | 1 | 246 | 129 | 375 | 6.72e-101 | 298 |
MS.gene036664.t1 | MTR_6g060650 | 61.111 | 252 | 85 | 6 | 1 | 246 | 126 | 370 | 5.83e-96 | 286 |
MS.gene036664.t1 | MTR_4g117720 | 60.156 | 256 | 83 | 7 | 1 | 244 | 124 | 372 | 1.98e-91 | 274 |
MS.gene036664.t1 | MTR_4g023130 | 61.446 | 249 | 78 | 7 | 1 | 246 | 77 | 310 | 7.77e-91 | 271 |
MS.gene036664.t1 | MTR_4g023080 | 59.839 | 249 | 82 | 7 | 1 | 246 | 118 | 351 | 6.11e-89 | 267 |
MS.gene036664.t1 | MTR_4g117850 | 58.871 | 248 | 92 | 5 | 1 | 242 | 130 | 373 | 3.04e-87 | 264 |
MS.gene036664.t1 | MTR_3g034180 | 58.462 | 260 | 87 | 9 | 1 | 246 | 234 | 486 | 8.62e-84 | 258 |
MS.gene036664.t1 | MTR_4g109270 | 57.874 | 254 | 87 | 8 | 1 | 246 | 120 | 361 | 1.12e-83 | 254 |
MS.gene036664.t1 | MTR_4g023090 | 54.198 | 262 | 92 | 7 | 1 | 243 | 126 | 378 | 5.20e-83 | 253 |
MS.gene036664.t1 | MTR_3g034160 | 58.462 | 260 | 87 | 7 | 1 | 246 | 120 | 372 | 5.21e-83 | 253 |
MS.gene036664.t1 | MTR_4g109280 | 60.484 | 248 | 90 | 6 | 2 | 246 | 114 | 356 | 1.23e-82 | 251 |
MS.gene036664.t1 | MTR_3g034130 | 57.430 | 249 | 86 | 8 | 1 | 235 | 120 | 362 | 3.13e-81 | 248 |
MS.gene036664.t1 | MTR_4g118380 | 57.511 | 233 | 81 | 6 | 2 | 220 | 129 | 357 | 8.33e-80 | 244 |
MS.gene036664.t1 | MTR_4g021785 | 56.000 | 250 | 91 | 7 | 1 | 246 | 118 | 352 | 1.12e-79 | 244 |
MS.gene036664.t1 | MTR_4g094365 | 55.378 | 251 | 99 | 6 | 1 | 245 | 117 | 360 | 1.37e-79 | 244 |
MS.gene036664.t1 | MTR_4g023380 | 52.768 | 271 | 75 | 8 | 1 | 243 | 126 | 371 | 5.19e-78 | 240 |
MS.gene036664.t1 | MTR_4g122850 | 54.582 | 251 | 100 | 9 | 3 | 244 | 114 | 359 | 7.94e-78 | 240 |
MS.gene036664.t1 | MTR_4g023190 | 54.545 | 253 | 93 | 7 | 1 | 246 | 119 | 356 | 6.97e-76 | 234 |
MS.gene036664.t1 | MTR_4g116330 | 53.815 | 249 | 69 | 4 | 1 | 247 | 135 | 339 | 3.31e-75 | 232 |
MS.gene036664.t1 | MTR_4g023200 | 52.964 | 253 | 98 | 7 | 1 | 246 | 119 | 357 | 1.14e-73 | 228 |
MS.gene036664.t1 | MTR_4g117780 | 53.101 | 258 | 97 | 8 | 1 | 246 | 119 | 364 | 1.64e-73 | 228 |
MS.gene036664.t1 | MTR_4g023150 | 52.569 | 253 | 99 | 7 | 1 | 246 | 119 | 357 | 6.31e-73 | 226 |
MS.gene036664.t1 | MTR_4g117770 | 51.550 | 258 | 101 | 8 | 1 | 246 | 119 | 364 | 2.18e-72 | 225 |
MS.gene036664.t1 | MTR_4g117810 | 51.550 | 258 | 101 | 8 | 1 | 246 | 119 | 364 | 2.18e-72 | 225 |
MS.gene036664.t1 | MTR_5g070080 | 53.441 | 247 | 106 | 6 | 1 | 243 | 138 | 379 | 3.66e-71 | 223 |
MS.gene036664.t1 | MTR_4g023070 | 50.000 | 264 | 106 | 7 | 1 | 246 | 112 | 367 | 7.21e-71 | 222 |
MS.gene036664.t1 | MTR_4g118400 | 50.410 | 244 | 87 | 5 | 2 | 243 | 83 | 294 | 4.14e-70 | 217 |
MS.gene036664.t1 | MTR_8g032390 | 53.200 | 250 | 104 | 7 | 1 | 243 | 126 | 369 | 2.73e-69 | 218 |
MS.gene036664.t1 | MTR_5g070130 | 51.575 | 254 | 108 | 7 | 1 | 243 | 121 | 370 | 3.09e-69 | 218 |
MS.gene036664.t1 | MTR_4g023120 | 49.242 | 264 | 108 | 7 | 1 | 246 | 112 | 367 | 2.21e-67 | 213 |
MS.gene036664.t1 | MTR_5g097210 | 51.200 | 250 | 111 | 5 | 2 | 247 | 119 | 361 | 2.77e-67 | 213 |
MS.gene036664.t1 | MTR_4g117870 | 50.000 | 246 | 83 | 6 | 1 | 245 | 57 | 263 | 2.82e-66 | 206 |
MS.gene036664.t1 | MTR_5g070088 | 49.600 | 250 | 114 | 6 | 1 | 243 | 135 | 379 | 2.11e-64 | 205 |
MS.gene036664.t1 | MTR_8g040935 | 57.071 | 198 | 80 | 4 | 54 | 246 | 8 | 205 | 3.37e-64 | 199 |
MS.gene036664.t1 | MTR_4g118370 | 50.000 | 254 | 89 | 9 | 2 | 246 | 33 | 257 | 7.97e-64 | 200 |
MS.gene036664.t1 | MTR_4g023440 | 47.984 | 248 | 80 | 6 | 1 | 246 | 129 | 329 | 5.35e-63 | 200 |
MS.gene036664.t1 | MTR_8g433040 | 49.802 | 253 | 104 | 6 | 1 | 246 | 125 | 361 | 1.08e-62 | 200 |
MS.gene036664.t1 | MTR_8g032380 | 49.802 | 253 | 104 | 6 | 1 | 246 | 125 | 361 | 1.08e-62 | 200 |
MS.gene036664.t1 | MTR_8g433030 | 55.505 | 218 | 87 | 6 | 30 | 243 | 125 | 336 | 1.99e-62 | 199 |
MS.gene036664.t1 | MTR_1g055135 | 45.946 | 259 | 116 | 6 | 1 | 245 | 123 | 371 | 2.77e-61 | 197 |
MS.gene036664.t1 | MTR_4g117750 | 50.769 | 260 | 102 | 8 | 1 | 245 | 107 | 355 | 4.59e-61 | 199 |
MS.gene036664.t1 | MTR_4g117750 | 62.609 | 115 | 35 | 3 | 139 | 249 | 373 | 483 | 8.93e-33 | 124 |
MS.gene036664.t1 | MTR_1g055195 | 47.104 | 259 | 104 | 8 | 1 | 246 | 237 | 475 | 7.98e-61 | 199 |
MS.gene036664.t1 | MTR_6g463430 | 53.846 | 195 | 83 | 4 | 54 | 246 | 10 | 199 | 4.58e-56 | 178 |
MS.gene036664.t1 | MTR_4g117530 | 44.355 | 248 | 86 | 6 | 7 | 246 | 47 | 250 | 4.08e-53 | 172 |
MS.gene036664.t1 | MTR_7g079370 | 42.857 | 259 | 128 | 8 | 2 | 244 | 97 | 351 | 1.29e-51 | 172 |
MS.gene036664.t1 | MTR_4g121580 | 45.703 | 256 | 100 | 10 | 1 | 247 | 126 | 351 | 1.64e-51 | 172 |
MS.gene036664.t1 | MTR_4g114700 | 44.130 | 247 | 81 | 7 | 2 | 240 | 21 | 218 | 3.50e-51 | 167 |
MS.gene036664.t1 | MTR_8g102520 | 43.600 | 250 | 126 | 10 | 2 | 243 | 74 | 316 | 4.48e-50 | 167 |
MS.gene036664.t1 | MTR_4g117430 | 57.616 | 151 | 55 | 3 | 1 | 151 | 14 | 155 | 5.69e-50 | 161 |
MS.gene036664.t1 | MTR_7g079400 | 42.857 | 259 | 121 | 10 | 1 | 243 | 84 | 331 | 2.99e-49 | 165 |
MS.gene036664.t1 | MTR_1g055250 | 45.070 | 213 | 104 | 6 | 29 | 236 | 49 | 253 | 2.10e-48 | 162 |
MS.gene036664.t1 | MTR_1g055175 | 46.465 | 198 | 87 | 5 | 60 | 246 | 9 | 198 | 5.32e-46 | 152 |
MS.gene036664.t1 | MTR_1g055165 | 41.057 | 246 | 92 | 6 | 2 | 246 | 122 | 315 | 1.07e-45 | 155 |
MS.gene036664.t1 | MTR_4g118360 | 61.905 | 126 | 44 | 2 | 124 | 247 | 1 | 124 | 7.19e-44 | 144 |
MS.gene036664.t1 | MTR_8g013010 | 53.642 | 151 | 61 | 3 | 1 | 148 | 165 | 309 | 1.36e-42 | 147 |
MS.gene036664.t1 | MTR_4g116340 | 59.664 | 119 | 40 | 2 | 2 | 114 | 131 | 247 | 3.51e-39 | 136 |
MS.gene036664.t1 | MTR_4g122860 | 44.974 | 189 | 65 | 7 | 64 | 243 | 156 | 314 | 3.26e-35 | 128 |
MS.gene036664.t1 | MTR_5g023000 | 66.327 | 98 | 29 | 2 | 151 | 246 | 1 | 96 | 1.11e-33 | 117 |
MS.gene036664.t1 | MTR_8g098830 | 45.783 | 166 | 75 | 7 | 60 | 216 | 35 | 194 | 2.10e-33 | 121 |
MS.gene036664.t1 | MTR_7g079420 | 36.782 | 261 | 110 | 12 | 1 | 244 | 917 | 1139 | 4.44e-33 | 127 |
MS.gene036664.t1 | MTR_2g048580 | 34.921 | 252 | 125 | 11 | 1 | 244 | 117 | 337 | 4.70e-29 | 112 |
MS.gene036664.t1 | MTR_7g079450 | 45.926 | 135 | 68 | 3 | 109 | 243 | 2 | 131 | 3.20e-25 | 97.1 |
MS.gene036664.t1 | MTR_6g034720 | 44.355 | 124 | 65 | 1 | 13 | 132 | 53 | 176 | 3.08e-24 | 96.7 |
MS.gene036664.t1 | MTR_3g007410 | 32.161 | 199 | 117 | 7 | 3 | 194 | 167 | 354 | 3.59e-22 | 94.4 |
MS.gene036664.t1 | MTR_7g117720 | 58.947 | 95 | 35 | 3 | 154 | 244 | 178 | 272 | 1.38e-21 | 90.9 |
MS.gene036664.t1 | MTR_7g117720 | 53.012 | 83 | 35 | 2 | 3 | 82 | 105 | 186 | 1.72e-18 | 82.8 |
MS.gene036664.t1 | MTR_3g007360 | 31.658 | 199 | 118 | 7 | 3 | 194 | 167 | 354 | 1.65e-21 | 92.8 |
MS.gene036664.t1 | MTR_4g133170 | 27.830 | 212 | 130 | 6 | 4 | 198 | 108 | 313 | 2.92e-21 | 92.0 |
MS.gene036664.t1 | MTR_4g030830 | 27.016 | 248 | 141 | 10 | 1 | 217 | 132 | 370 | 1.11e-20 | 90.1 |
MS.gene036664.t1 | MTR_2g028160 | 28.319 | 226 | 140 | 8 | 1 | 208 | 130 | 351 | 2.12e-20 | 89.7 |
MS.gene036664.t1 | MTR_2g028130 | 28.910 | 211 | 130 | 7 | 1 | 195 | 130 | 336 | 2.99e-20 | 89.4 |
MS.gene036664.t1 | MTR_4g023430 | 56.962 | 79 | 31 | 2 | 171 | 246 | 141 | 219 | 9.59e-19 | 82.4 |
MS.gene036664.t1 | MTR_5g011200 | 32.787 | 183 | 105 | 8 | 3 | 178 | 134 | 305 | 1.01e-18 | 84.7 |
MS.gene036664.t1 | MTR_4g070550 | 29.167 | 192 | 113 | 7 | 1 | 174 | 125 | 311 | 1.69e-18 | 84.0 |
MS.gene036664.t1 | MTR_8g013005 | 69.492 | 59 | 14 | 2 | 189 | 246 | 1 | 56 | 3.40e-18 | 76.3 |
MS.gene036664.t1 | MTR_0667s0010 | 25.974 | 231 | 148 | 7 | 1 | 212 | 118 | 344 | 6.21e-18 | 82.4 |
MS.gene036664.t1 | MTR_3g009310 | 32.778 | 180 | 106 | 7 | 3 | 179 | 160 | 327 | 6.81e-18 | 82.4 |
MS.gene036664.t1 | MTR_4g122840 | 43.511 | 131 | 38 | 4 | 115 | 244 | 164 | 259 | 1.23e-17 | 80.1 |
MS.gene036664.t1 | MTR_5g097350 | 25.896 | 251 | 166 | 8 | 3 | 245 | 148 | 386 | 3.32e-17 | 80.5 |
MS.gene036664.t1 | MTR_7g013590 | 31.579 | 190 | 116 | 8 | 1 | 185 | 146 | 326 | 4.35e-17 | 80.1 |
MS.gene036664.t1 | MTR_2g426020 | 26.592 | 267 | 170 | 10 | 1 | 247 | 124 | 384 | 4.82e-17 | 80.1 |
MS.gene036664.t1 | MTR_7g407070 | 31.472 | 197 | 119 | 8 | 3 | 187 | 154 | 346 | 5.16e-17 | 79.7 |
MS.gene036664.t1 | MTR_2g024110 | 27.273 | 187 | 112 | 6 | 4 | 174 | 111 | 289 | 1.03e-16 | 79.0 |
MS.gene036664.t1 | MTR_7g070880 | 29.362 | 235 | 123 | 10 | 1 | 198 | 147 | 375 | 1.15e-16 | 79.0 |
MS.gene036664.t1 | MTR_2g026010 | 27.919 | 197 | 119 | 6 | 1 | 178 | 105 | 297 | 1.23e-16 | 79.0 |
MS.gene036664.t1 | MTR_7g056820 | 26.522 | 230 | 137 | 9 | 28 | 232 | 151 | 373 | 1.44e-16 | 78.6 |
MS.gene036664.t1 | MTR_1g068835 | 28.723 | 188 | 119 | 6 | 4 | 179 | 108 | 292 | 2.30e-16 | 77.8 |
MS.gene036664.t1 | MTR_2g021150 | 28.502 | 207 | 127 | 9 | 3 | 198 | 132 | 328 | 3.08e-16 | 77.4 |
MS.gene036664.t1 | MTR_4g028510 | 26.522 | 230 | 136 | 6 | 3 | 208 | 139 | 359 | 8.94e-16 | 76.6 |
MS.gene036664.t1 | MTR_2g078870 | 30.460 | 174 | 100 | 7 | 3 | 174 | 78 | 232 | 9.30e-16 | 75.5 |
MS.gene036664.t1 | MTR_3g007330 | 31.383 | 188 | 113 | 7 | 3 | 185 | 158 | 334 | 9.53e-16 | 76.3 |
MS.gene036664.t1 | MTR_3g083010 | 26.568 | 271 | 164 | 8 | 1 | 243 | 132 | 395 | 9.64e-16 | 76.3 |
MS.gene036664.t1 | MTR_4g055060 | 31.720 | 186 | 111 | 7 | 1 | 179 | 146 | 322 | 1.75e-15 | 75.5 |
MS.gene036664.t1 | MTR_8g464770 | 27.778 | 252 | 161 | 8 | 3 | 243 | 136 | 377 | 1.90e-15 | 75.1 |
MS.gene036664.t1 | MTR_3g006670 | 31.720 | 186 | 100 | 9 | 1 | 174 | 162 | 332 | 2.49e-15 | 75.1 |
MS.gene036664.t1 | MTR_2g025960 | 25.455 | 220 | 141 | 7 | 1 | 202 | 29 | 243 | 4.01e-15 | 73.9 |
MS.gene036664.t1 | MTR_4g109290 | 61.538 | 52 | 20 | 0 | 1 | 52 | 91 | 142 | 5.27e-15 | 71.6 |
MS.gene036664.t1 | MTR_4g020000 | 28.505 | 214 | 129 | 6 | 19 | 210 | 103 | 314 | 7.39e-15 | 73.6 |
MS.gene036664.t1 | MTR_2g021050 | 26.882 | 186 | 116 | 6 | 28 | 198 | 130 | 310 | 1.50e-14 | 72.8 |
MS.gene036664.t1 | MTR_7g070440 | 29.592 | 196 | 117 | 5 | 3 | 183 | 121 | 310 | 1.51e-14 | 72.8 |
MS.gene036664.t1 | MTR_6g090180 | 26.766 | 269 | 161 | 10 | 3 | 242 | 173 | 434 | 1.51e-14 | 72.8 |
MS.gene036664.t1 | MTR_3g009240 | 31.492 | 181 | 113 | 6 | 1 | 179 | 146 | 317 | 1.59e-14 | 72.8 |
MS.gene036664.t1 | MTR_3g036335 | 27.381 | 252 | 151 | 11 | 3 | 241 | 162 | 394 | 1.64e-14 | 72.8 |
MS.gene036664.t1 | MTR_6g088385 | 27.899 | 276 | 154 | 12 | 2 | 243 | 56 | 320 | 1.71e-14 | 72.0 |
MS.gene036664.t1 | MTR_4g023100 | 66.071 | 56 | 15 | 1 | 191 | 246 | 65 | 116 | 1.92e-14 | 68.2 |
MS.gene036664.t1 | MTR_2g028140 | 26.702 | 191 | 119 | 7 | 1 | 174 | 131 | 317 | 2.25e-14 | 72.4 |
MS.gene036664.t1 | MTR_5g057790 | 30.168 | 179 | 110 | 6 | 3 | 178 | 164 | 330 | 2.43e-14 | 72.0 |
MS.gene036664.t1 | MTR_1g068875 | 27.273 | 187 | 122 | 6 | 4 | 179 | 108 | 291 | 3.06e-14 | 71.6 |
MS.gene036664.t1 | MTR_3g024130 | 31.522 | 184 | 109 | 8 | 3 | 179 | 78 | 251 | 3.47e-14 | 71.2 |
MS.gene036664.t1 | MTR_4g108820 | 27.322 | 183 | 121 | 4 | 3 | 185 | 125 | 295 | 4.09e-14 | 70.9 |
MS.gene036664.t1 | MTR_3g013770 | 31.148 | 183 | 112 | 6 | 1 | 178 | 150 | 323 | 4.09e-14 | 71.6 |
MS.gene036664.t1 | MTR_1g068860 | 29.032 | 155 | 104 | 4 | 29 | 179 | 142 | 294 | 4.74e-14 | 71.2 |
MS.gene036664.t1 | MTR_1g054725 | 26.459 | 257 | 154 | 12 | 4 | 241 | 135 | 375 | 5.88e-14 | 70.9 |
MS.gene036664.t1 | MTR_4g030980 | 26.396 | 197 | 126 | 4 | 1 | 182 | 165 | 357 | 7.43e-14 | 70.9 |
MS.gene036664.t1 | MTR_3g010390 | 29.255 | 188 | 122 | 6 | 1 | 180 | 153 | 337 | 7.47e-14 | 70.9 |
MS.gene036664.t1 | MTR_3g013740 | 31.443 | 194 | 101 | 11 | 1 | 178 | 165 | 342 | 8.26e-14 | 70.5 |
MS.gene036664.t1 | MTR_2g021190 | 25.781 | 256 | 155 | 9 | 3 | 241 | 135 | 372 | 1.16e-13 | 70.1 |
MS.gene036664.t1 | MTR_2g025420 | 25.463 | 216 | 134 | 7 | 3 | 195 | 132 | 343 | 1.20e-13 | 70.1 |
MS.gene036664.t1 | MTR_6g086825 | 26.619 | 278 | 160 | 11 | 3 | 246 | 193 | 460 | 1.92e-13 | 69.7 |
MS.gene036664.t1 | MTR_8g099460 | 28.846 | 156 | 105 | 4 | 25 | 178 | 150 | 301 | 2.05e-13 | 69.3 |
MS.gene036664.t1 | MTR_3g030320 | 27.094 | 203 | 124 | 7 | 3 | 196 | 62 | 249 | 3.31e-13 | 68.2 |
MS.gene036664.t1 | MTR_5g057710 | 30.726 | 179 | 109 | 6 | 3 | 178 | 164 | 330 | 4.03e-13 | 68.6 |
MS.gene036664.t1 | MTR_1g056710 | 29.730 | 185 | 111 | 8 | 3 | 178 | 144 | 318 | 4.67e-13 | 68.2 |
MS.gene036664.t1 | MTR_3g014540 | 30.387 | 181 | 114 | 7 | 3 | 178 | 142 | 315 | 5.22e-13 | 68.2 |
MS.gene036664.t1 | MTR_2g024100 | 28.042 | 189 | 115 | 5 | 3 | 174 | 122 | 306 | 5.25e-13 | 68.2 |
MS.gene036664.t1 | MTR_2g425980 | 27.000 | 200 | 115 | 7 | 1 | 178 | 122 | 312 | 5.79e-13 | 68.2 |
MS.gene036664.t1 | MTR_0044s0300 | 29.630 | 189 | 107 | 8 | 3 | 186 | 155 | 322 | 6.20e-13 | 68.2 |
MS.gene036664.t1 | MTR_4g024890 | 24.895 | 237 | 152 | 8 | 1 | 220 | 129 | 356 | 6.27e-13 | 67.8 |
MS.gene036664.t1 | MTR_4g013175 | 26.275 | 255 | 142 | 11 | 1 | 219 | 150 | 394 | 7.57e-13 | 67.8 |
MS.gene036664.t1 | MTR_2g021800 | 25.368 | 272 | 166 | 9 | 3 | 244 | 150 | 414 | 1.07e-12 | 67.4 |
MS.gene036664.t1 | MTR_0054s0090 | 25.547 | 274 | 165 | 10 | 1 | 242 | 136 | 402 | 1.30e-12 | 67.0 |
MS.gene036664.t1 | MTR_1g055375 | 29.787 | 188 | 116 | 8 | 3 | 186 | 124 | 299 | 1.32e-12 | 67.0 |
MS.gene036664.t1 | MTR_2g426070 | 26.596 | 188 | 121 | 6 | 3 | 178 | 131 | 313 | 1.33e-12 | 67.0 |
MS.gene036664.t1 | MTR_3g436150 | 30.500 | 200 | 120 | 9 | 1 | 189 | 151 | 342 | 1.65e-12 | 66.6 |
MS.gene036664.t1 | MTR_1g050542 | 23.288 | 219 | 147 | 6 | 3 | 210 | 166 | 374 | 2.63e-12 | 66.2 |
MS.gene036664.t1 | MTR_1g055065 | 29.032 | 186 | 114 | 7 | 5 | 178 | 39 | 218 | 2.91e-12 | 65.5 |
MS.gene036664.t1 | MTR_4g028660 | 26.038 | 265 | 164 | 9 | 3 | 242 | 138 | 395 | 3.02e-12 | 65.9 |
MS.gene036664.t1 | MTR_4g027450 | 26.038 | 265 | 164 | 9 | 3 | 242 | 138 | 395 | 3.02e-12 | 65.9 |
MS.gene036664.t1 | MTR_4g013185 | 26.667 | 255 | 141 | 12 | 1 | 219 | 150 | 394 | 3.21e-12 | 65.9 |
MS.gene036664.t1 | MTR_0054s0100 | 25.182 | 274 | 166 | 10 | 1 | 242 | 138 | 404 | 4.07e-12 | 65.5 |
MS.gene036664.t1 | MTR_6g007150 | 29.282 | 181 | 111 | 10 | 1 | 174 | 91 | 261 | 4.32e-12 | 65.5 |
MS.gene036664.t1 | MTR_1g097490 | 24.444 | 225 | 157 | 7 | 3 | 224 | 162 | 376 | 4.47e-12 | 65.5 |
MS.gene036664.t1 | MTR_3g007390 | 29.221 | 154 | 97 | 6 | 29 | 179 | 2 | 146 | 5.24e-12 | 63.5 |
MS.gene036664.t1 | MTR_2g046920 | 26.630 | 184 | 122 | 5 | 3 | 183 | 139 | 312 | 5.42e-12 | 65.1 |
MS.gene036664.t1 | MTR_2g043400 | 28.063 | 253 | 120 | 13 | 3 | 216 | 157 | 386 | 5.55e-12 | 65.1 |
MS.gene036664.t1 | MTR_3g083640 | 26.404 | 178 | 113 | 7 | 3 | 178 | 173 | 334 | 6.34e-12 | 65.1 |
MS.gene036664.t1 | MTR_2g031640 | 25.389 | 193 | 126 | 6 | 1 | 178 | 106 | 295 | 6.97e-12 | 64.7 |
MS.gene036664.t1 | MTR_3g010590 | 27.746 | 173 | 103 | 6 | 2 | 174 | 156 | 306 | 7.47e-12 | 64.7 |
MS.gene036664.t1 | MTR_1g115160 | 26.486 | 185 | 120 | 7 | 3 | 185 | 136 | 306 | 8.82e-12 | 64.7 |
MS.gene036664.t1 | MTR_0129s0050 | 26.316 | 285 | 156 | 11 | 1 | 242 | 131 | 404 | 1.04e-11 | 64.3 |
MS.gene036664.t1 | MTR_6g065980 | 28.161 | 174 | 105 | 8 | 3 | 174 | 127 | 282 | 1.98e-11 | 63.5 |
MS.gene036664.t1 | MTR_7g066850 | 24.898 | 245 | 146 | 8 | 2 | 219 | 141 | 374 | 2.11e-11 | 63.5 |
MS.gene036664.t1 | MTR_2g038680 | 23.913 | 276 | 164 | 10 | 3 | 242 | 142 | 407 | 2.16e-11 | 63.5 |
MS.gene036664.t1 | MTR_2g021155 | 29.944 | 177 | 114 | 8 | 3 | 174 | 711 | 882 | 2.18e-11 | 63.9 |
MS.gene036664.t1 | MTR_7g060940 | 26.374 | 273 | 146 | 11 | 1 | 240 | 142 | 392 | 2.22e-11 | 63.5 |
MS.gene036664.t1 | MTR_0129s0070 | 26.446 | 242 | 141 | 12 | 3 | 217 | 138 | 369 | 2.55e-11 | 63.2 |
MS.gene036664.t1 | MTR_7g078900 | 26.295 | 251 | 144 | 11 | 3 | 220 | 149 | 391 | 2.79e-11 | 63.2 |
MS.gene036664.t1 | MTR_3g011060 | 30.570 | 193 | 108 | 9 | 3 | 185 | 150 | 326 | 3.70e-11 | 62.8 |
MS.gene036664.t1 | MTR_7g056003 | 25.703 | 249 | 137 | 9 | 1 | 216 | 142 | 375 | 5.54e-11 | 62.4 |
MS.gene036664.t1 | MTR_5g009060 | 29.348 | 184 | 111 | 9 | 3 | 174 | 162 | 338 | 5.67e-11 | 62.4 |
MS.gene036664.t1 | MTR_7g077970 | 28.708 | 209 | 119 | 9 | 3 | 187 | 137 | 339 | 6.89e-11 | 62.0 |
MS.gene036664.t1 | MTR_1g088120 | 27.411 | 197 | 115 | 8 | 3 | 179 | 138 | 326 | 7.23e-11 | 62.0 |
MS.gene036664.t1 | MTR_1g094210 | 25.600 | 250 | 156 | 10 | 1 | 241 | 170 | 398 | 7.50e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036664.t1 | AT3G06240 | 29.008 | 262 | 141 | 14 | 1 | 241 | 182 | 419 | 1.55e-15 | 75.9 |
MS.gene036664.t1 | AT4G22390 | 24.268 | 239 | 155 | 10 | 1 | 216 | 108 | 343 | 1.09e-11 | 64.3 |
MS.gene036664.t1 | AT4G22390 | 24.268 | 239 | 155 | 10 | 1 | 216 | 108 | 343 | 1.42e-11 | 63.9 |
Find 56 sgRNAs with CRISPR-Local
Find 71 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTGTTGCATTTGATTTAA+TGG | 0.134412 | 8.1:+10718640 | MS.gene036664:CDS |
TATAGTCATTTGTGGGTATT+TGG | 0.170693 | 8.1:+10718716 | MS.gene036664:CDS |
GCAGCATATTACTATGGTTT+TGG | 0.206233 | 8.1:+10718383 | MS.gene036664:CDS |
AAAATAGCATAGTTGAAATA+TGG | 0.236820 | 8.1:+10718771 | MS.gene036664:CDS |
TCATCAGGATAAAGCATATA+AGG | 0.272694 | 8.1:-10718545 | None:intergenic |
TTCTAGAGCATAACTCATTC+TGG | 0.272735 | 8.1:+10718954 | MS.gene036664:CDS |
ACTCTTAATTTGTCTATTGA+TGG | 0.294325 | 8.1:+10718833 | MS.gene036664:CDS |
GAAATACCCGTGTCTCCTTT+TGG | 0.333954 | 8.1:+10718347 | MS.gene036664:CDS |
GTAATATGCTGCATCTGAAT+TGG | 0.353547 | 8.1:-10718372 | None:intergenic |
TCAGATGCAGCATATTACTA+TGG | 0.363184 | 8.1:+10718377 | MS.gene036664:CDS |
CCAAGTAATCATCTGTTAAC+TGG | 0.412624 | 8.1:-10718412 | None:intergenic |
GATTCAAGGCCAAAACCATC+TGG | 0.437802 | 8.1:-10718689 | None:intergenic |
CCAGTTAACAGATGATTACT+TGG | 0.444298 | 8.1:+10718412 | MS.gene036664:CDS |
AATGACTATATTCAGATTCA+AGG | 0.447436 | 8.1:-10718703 | None:intergenic |
TAGTGGGGCTATTCATTGGT+TGG | 0.452286 | 8.1:+10718589 | MS.gene036664:CDS |
TCCATGTCCAATTGGATCCC+TGG | 0.453396 | 8.1:+10718982 | MS.gene036664:CDS |
CATCAGGATAAAGCATATAA+GGG | 0.461790 | 8.1:-10718544 | None:intergenic |
GACCCTAGTCTATGCTCATC+AGG | 0.468483 | 8.1:-10718560 | None:intergenic |
ATCTGAATATAGTCATTTGT+GGG | 0.478762 | 8.1:+10718709 | MS.gene036664:CDS |
AAATAGCATAGTTGAAATAT+GGG | 0.480715 | 8.1:+10718772 | MS.gene036664:CDS |
AATCTGAATATAGTCATTTG+TGG | 0.482544 | 8.1:+10718708 | MS.gene036664:CDS |
AATACAAAGTGCACTCGTCT+TGG | 0.485581 | 8.1:+10718804 | MS.gene036664:CDS |
TGGGACGGTCCATGTCCAAT+TGG | 0.488340 | 8.1:+10718974 | MS.gene036664:CDS |
TGGAGAATTTCTCAGTCTAT+CGG | 0.492329 | 8.1:+10718736 | MS.gene036664:CDS |
GGTGACATTATTGGAACAAA+TGG | 0.492408 | 8.1:+10718893 | MS.gene036664:CDS |
ATGGTCACCAGGGATCCAAT+TGG | 0.497354 | 8.1:-10718989 | None:intergenic |
ATTTCTCAGTCTATCGGCTA+TGG | 0.499084 | 8.1:+10718742 | MS.gene036664:CDS |
TATTTCTTTGTTAGCTCCAG+TGG | 0.500366 | 8.1:-10718330 | None:intergenic |
GGAGCATATAGGGGAAAAGT+AGG | 0.504573 | 8.1:-10718861 | None:intergenic |
TCTAGAGCATAACTCATTCT+GGG | 0.507717 | 8.1:+10718955 | MS.gene036664:CDS |
AGCATCAAAGTTTAGTACAT+AGG | 0.509137 | 8.1:-10718447 | None:intergenic |
TCTTTGTTAGCTCCAGTGGA+TGG | 0.512485 | 8.1:-10718326 | None:intergenic |
GCATCTGAATTGGAACCAAA+AGG | 0.523585 | 8.1:-10718362 | None:intergenic |
TAGGGTAGCACATTGTCACT+AGG | 0.543658 | 8.1:-10719037 | None:intergenic |
TATCCTGATGAGCATAGACT+AGG | 0.549131 | 8.1:+10718557 | MS.gene036664:CDS |
TTGCATTTGATTTAATGGAA+AGG | 0.552603 | 8.1:+10718645 | MS.gene036664:CDS |
GTTAACAGATGATTACTTGG+TGG | 0.554811 | 8.1:+10718415 | MS.gene036664:CDS |
CATTTGATTTAATGGAAAGG+AGG | 0.569257 | 8.1:+10718648 | MS.gene036664:CDS |
TATCTGTGGAATCCATCCAC+TGG | 0.576516 | 8.1:+10718314 | MS.gene036664:CDS |
AAGCAGAGACTCTGTATACA+TGG | 0.578494 | 8.1:-10719008 | None:intergenic |
TAGTACGTGGAAAGAACTTG+AGG | 0.584159 | 8.1:+10718511 | MS.gene036664:CDS |
TAATCACGTTAATTCGCGAT+TGG | 0.586340 | 8.1:+10718469 | MS.gene036664:CDS |
ACTCTGTATACATGGTCACC+AGG | 0.593150 | 8.1:-10719000 | None:intergenic |
GAGCATATAGGGGAAAAGTA+GGG | 0.598278 | 8.1:-10718860 | None:intergenic |
AGGGTAGCACATTGTCACTA+GGG | 0.602323 | 8.1:-10719036 | None:intergenic |
ATCCAAACATCATGTATCTG+TGG | 0.604307 | 8.1:+10718300 | None:intergenic |
GGATAAAGCATATAAGGGAA+CGG | 0.605046 | 8.1:-10718539 | None:intergenic |
ACCAGGGATCCAATTGGACA+TGG | 0.626716 | 8.1:-10718983 | None:intergenic |
ATCCTGATGAGCATAGACTA+GGG | 0.632862 | 8.1:+10718558 | MS.gene036664:CDS |
GAGCATAACTCATTCTGGGA+CGG | 0.638615 | 8.1:+10718959 | MS.gene036664:CDS |
CTCTGTATACATGGTCACCA+GGG | 0.642272 | 8.1:-10718999 | None:intergenic |
TTGGAACCAAAAGGAGACAC+GGG | 0.646621 | 8.1:-10718353 | None:intergenic |
AGTACGTGGAAAGAACTTGA+GGG | 0.658652 | 8.1:+10718512 | MS.gene036664:CDS |
ATTGGAACCAAAAGGAGACA+CGG | 0.667029 | 8.1:-10718354 | None:intergenic |
TCTCGTTGAGAGATAGTACG+TGG | 0.669049 | 8.1:+10718498 | MS.gene036664:CDS |
TTGTTGAAGTATAACGACAA+AGG | 0.682733 | 8.1:+10718926 | MS.gene036664:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAGCATAGTTGAAATA+TGG | + | chr8.1:10718771-10718790 | MS.gene036664:CDS | 20.0% |
!! | AAATAGCATAGTTGAAATAT+GGG | + | chr8.1:10718772-10718791 | MS.gene036664:CDS | 20.0% |
!!! | TATTGTTGCATTTGATTTAA+TGG | + | chr8.1:10718640-10718659 | MS.gene036664:CDS | 20.0% |
! | AATCTGAATATAGTCATTTG+TGG | + | chr8.1:10718708-10718727 | MS.gene036664:CDS | 25.0% |
! | AATGACTATATTCAGATTCA+AGG | - | chr8.1:10718706-10718725 | None:intergenic | 25.0% |
! | ATCTGAATATAGTCATTTGT+GGG | + | chr8.1:10718709-10718728 | MS.gene036664:CDS | 25.0% |
!! | TTGCATTTGATTTAATGGAA+AGG | + | chr8.1:10718645-10718664 | MS.gene036664:CDS | 25.0% |
!! | TTTTCACAATGATTTAGGAA+GGG | + | chr8.1:10718613-10718632 | MS.gene036664:CDS | 25.0% |
!!! | ACTCTTAATTTGTCTATTGA+TGG | + | chr8.1:10718833-10718852 | MS.gene036664:CDS | 25.0% |
ACAAAAAGTGGTGACATTAT+TGG | + | chr8.1:10718884-10718903 | MS.gene036664:CDS | 30.0% | |
AGCATCAAAGTTTAGTACAT+AGG | - | chr8.1:10718450-10718469 | None:intergenic | 30.0% | |
CATCAGGATAAAGCATATAA+GGG | - | chr8.1:10718547-10718566 | None:intergenic | 30.0% | |
TATAGTCATTTGTGGGTATT+TGG | + | chr8.1:10718716-10718735 | MS.gene036664:CDS | 30.0% | |
TCATCAGGATAAAGCATATA+AGG | - | chr8.1:10718548-10718567 | None:intergenic | 30.0% | |
TTGTTGAAGTATAACGACAA+AGG | + | chr8.1:10718926-10718945 | MS.gene036664:CDS | 30.0% | |
! | CAGCATATTACTATGGTTTT+GGG | + | chr8.1:10718384-10718403 | MS.gene036664:CDS | 30.0% |
! | CATTTGATTTAATGGAAAGG+AGG | + | chr8.1:10718648-10718667 | MS.gene036664:CDS | 30.0% |
! | CTTTTCACAATGATTTAGGA+AGG | + | chr8.1:10718612-10718631 | MS.gene036664:CDS | 30.0% |
!! | TTGGCTTTTCACAATGATTT+AGG | + | chr8.1:10718608-10718627 | MS.gene036664:CDS | 30.0% |
!!! | AATAATGTCACCACTTTTTG+TGG | - | chr8.1:10718885-10718904 | None:intergenic | 30.0% |
CCAAGTAATCATCTGTTAAC+TGG | - | chr8.1:10718415-10718434 | None:intergenic | 35.0% | |
CCAGTTAACAGATGATTACT+TGG | + | chr8.1:10718412-10718431 | MS.gene036664:CDS | 35.0% | |
GGATAAAGCATATAAGGGAA+CGG | - | chr8.1:10718542-10718561 | None:intergenic | 35.0% | |
GGTGACATTATTGGAACAAA+TGG | + | chr8.1:10718893-10718912 | MS.gene036664:CDS | 35.0% | |
GTAATATGCTGCATCTGAAT+TGG | - | chr8.1:10718375-10718394 | None:intergenic | 35.0% | |
GTTAACAGATGATTACTTGG+TGG | + | chr8.1:10718415-10718434 | MS.gene036664:CDS | 35.0% | |
TAATCACGTTAATTCGCGAT+TGG | + | chr8.1:10718469-10718488 | MS.gene036664:CDS | 35.0% | |
TATTTCTTTGTTAGCTCCAG+TGG | - | chr8.1:10718333-10718352 | None:intergenic | 35.0% | |
TCAGATGCAGCATATTACTA+TGG | + | chr8.1:10718377-10718396 | MS.gene036664:CDS | 35.0% | |
TGGAGAATTTCTCAGTCTAT+CGG | + | chr8.1:10718736-10718755 | MS.gene036664:CDS | 35.0% | |
! | ACTTTTTGTGGAGCATATAG+GGG | - | chr8.1:10718873-10718892 | None:intergenic | 35.0% |
! | ATGTCTTTTCCAGATGGTTT+TGG | + | chr8.1:10718680-10718699 | MS.gene036664:CDS | 35.0% |
! | GCAGCATATTACTATGGTTT+TGG | + | chr8.1:10718383-10718402 | MS.gene036664:CDS | 35.0% |
! | TCTAGAGCATAACTCATTCT+GGG | + | chr8.1:10718955-10718974 | MS.gene036664:CDS | 35.0% |
! | TTAGAGATGTCTTTTCCAGA+TGG | + | chr8.1:10718674-10718693 | MS.gene036664:CDS | 35.0% |
!! | CACTTTTTGTGGAGCATATA+GGG | - | chr8.1:10718874-10718893 | None:intergenic | 35.0% |
!! | TTCTAGAGCATAACTCATTC+TGG | + | chr8.1:10718954-10718973 | MS.gene036664:CDS | 35.0% |
!! | TTTTTAGTGGGGCTATTCAT+TGG | + | chr8.1:10718585-10718604 | MS.gene036664:CDS | 35.0% |
AAGCAGAGACTCTGTATACA+TGG | - | chr8.1:10719011-10719030 | None:intergenic | 40.0% | |
AATACAAAGTGCACTCGTCT+TGG | + | chr8.1:10718804-10718823 | MS.gene036664:CDS | 40.0% | |
AGTACGTGGAAAGAACTTGA+GGG | + | chr8.1:10718512-10718531 | MS.gene036664:CDS | 40.0% | |
ATCCTGATGAGCATAGACTA+GGG | + | chr8.1:10718558-10718577 | MS.gene036664:CDS | 40.0% | |
ATTGGAACCAAAAGGAGACA+CGG | - | chr8.1:10718357-10718376 | None:intergenic | 40.0% | |
CCTATATGCTCCACAAAAAG+TGG | + | chr8.1:10718872-10718891 | MS.gene036664:CDS | 40.0% | |
GAGCATATAGGGGAAAAGTA+GGG | - | chr8.1:10718863-10718882 | None:intergenic | 40.0% | |
GCATCTGAATTGGAACCAAA+AGG | - | chr8.1:10718365-10718384 | None:intergenic | 40.0% | |
TAGTACGTGGAAAGAACTTG+AGG | + | chr8.1:10718511-10718530 | MS.gene036664:CDS | 40.0% | |
TATCCTGATGAGCATAGACT+AGG | + | chr8.1:10718557-10718576 | MS.gene036664:CDS | 40.0% | |
! | ATTTCTCAGTCTATCGGCTA+TGG | + | chr8.1:10718742-10718761 | MS.gene036664:CDS | 40.0% |
!!! | ACTAGGGTCACTTTTTAGTG+GGG | + | chr8.1:10718574-10718593 | MS.gene036664:CDS | 40.0% |
!!! | AGACTAGGGTCACTTTTTAG+TGG | + | chr8.1:10718572-10718591 | MS.gene036664:CDS | 40.0% |
!!! | CCACTTTTTGTGGAGCATAT+AGG | - | chr8.1:10718875-10718894 | None:intergenic | 40.0% |
!!! | GACTAGGGTCACTTTTTAGT+GGG | + | chr8.1:10718573-10718592 | MS.gene036664:CDS | 40.0% |
ACTCTGTATACATGGTCACC+AGG | - | chr8.1:10719003-10719022 | None:intergenic | 45.0% | |
AGGGTAGCACATTGTCACTA+GGG | - | chr8.1:10719039-10719058 | None:intergenic | 45.0% | |
CTCTGTATACATGGTCACCA+GGG | - | chr8.1:10719002-10719021 | None:intergenic | 45.0% | |
GATTCAAGGCCAAAACCATC+TGG | - | chr8.1:10718692-10718711 | None:intergenic | 45.0% | |
GGAGCATATAGGGGAAAAGT+AGG | - | chr8.1:10718864-10718883 | None:intergenic | 45.0% | |
TAGGGTAGCACATTGTCACT+AGG | - | chr8.1:10719040-10719059 | None:intergenic | 45.0% | |
TAGTGGGGCTATTCATTGGT+TGG | + | chr8.1:10718589-10718608 | MS.gene036664:CDS | 45.0% | |
TATCTGTGGAATCCATCCAC+TGG | + | chr8.1:10718314-10718333 | MS.gene036664:CDS | 45.0% | |
TCTCGTTGAGAGATAGTACG+TGG | + | chr8.1:10718498-10718517 | MS.gene036664:CDS | 45.0% | |
TCTTTGTTAGCTCCAGTGGA+TGG | - | chr8.1:10718329-10718348 | None:intergenic | 45.0% | |
TTGGAACCAAAAGGAGACAC+GGG | - | chr8.1:10718356-10718375 | None:intergenic | 45.0% | |
! | GAAATACCCGTGTCTCCTTT+TGG | + | chr8.1:10718347-10718366 | MS.gene036664:CDS | 45.0% |
! | GAGCATAACTCATTCTGGGA+CGG | + | chr8.1:10718959-10718978 | MS.gene036664:CDS | 45.0% |
ACCAGGGATCCAATTGGACA+TGG | - | chr8.1:10718986-10719005 | None:intergenic | 50.0% | |
ATGGTCACCAGGGATCCAAT+TGG | - | chr8.1:10718992-10719011 | None:intergenic | 50.0% | |
GACCCTAGTCTATGCTCATC+AGG | - | chr8.1:10718563-10718582 | None:intergenic | 50.0% | |
TCCATGTCCAATTGGATCCC+TGG | + | chr8.1:10718982-10719001 | MS.gene036664:CDS | 50.0% | |
TGGGACGGTCCATGTCCAAT+TGG | + | chr8.1:10718974-10718993 | MS.gene036664:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 10718311 | 10719060 | 10718311 | ID=MS.gene036664 |
chr8.1 | mRNA | 10718311 | 10719060 | 10718311 | ID=MS.gene036664.t1;Parent=MS.gene036664 |
chr8.1 | exon | 10718311 | 10719060 | 10718311 | ID=MS.gene036664.t1.exon1;Parent=MS.gene036664.t1 |
chr8.1 | CDS | 10718311 | 10719060 | 10718311 | ID=cds.MS.gene036664.t1;Parent=MS.gene036664.t1 |
Gene Sequence |
Protein sequence |