AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058694


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058694.t1 MTR_7g079370 93.787 338 21 0 38 375 16 353 0.0 655
MS.gene058694.t1 MTR_5g069120 89.888 178 18 0 19 196 1 178 6.94e-115 332
MS.gene058694.t1 MTR_2g048580 46.859 382 150 12 3 375 2 339 7.08e-98 295
MS.gene058694.t1 MTR_8g102520 48.656 372 130 9 4 372 3 316 1.32e-94 285
MS.gene058694.t1 MTR_7g079400 52.681 317 122 9 70 372 29 331 4.76e-94 285
MS.gene058694.t1 MTR_3g103020 44.211 380 185 11 1 372 12 372 5.01e-85 263
MS.gene058694.t1 MTR_6g060650 45.812 382 179 11 3 372 2 367 7.06e-83 257
MS.gene058694.t1 MTR_3g034180 42.338 385 193 10 1 372 115 483 4.80e-81 256
MS.gene058694.t1 MTR_4g023080 41.867 375 183 11 3 371 2 347 5.24e-80 249
MS.gene058694.t1 MTR_3g034160 43.229 384 191 9 1 372 1 369 2.26e-79 248
MS.gene058694.t1 MTR_3g034130 42.149 363 185 7 1 351 1 350 6.22e-78 244
MS.gene058694.t1 MTR_5g070080 41.814 397 185 14 2 372 3 379 4.51e-77 243
MS.gene058694.t1 MTR_4g116330 42.674 389 174 15 3 372 16 374 1.09e-76 241
MS.gene058694.t1 MTR_4g109280 44.094 381 175 14 3 373 2 354 1.21e-76 241
MS.gene058694.t1 MTR_5g070130 42.559 383 190 12 3 372 5 370 4.72e-76 240
MS.gene058694.t1 MTR_4g094365 42.257 381 185 15 3 372 2 358 4.72e-75 237
MS.gene058694.t1 MTR_5g070088 41.414 396 171 12 12 372 10 379 1.78e-74 236
MS.gene058694.t1 MTR_4g117720 41.885 382 157 12 3 373 45 372 2.77e-74 235
MS.gene058694.t1 MTR_4g023090 39.848 394 189 13 3 372 9 378 3.22e-74 235
MS.gene058694.t1 MTR_4g021785 39.628 376 194 10 1 371 1 348 3.34e-74 234
MS.gene058694.t1 MTR_4g117850 42.400 375 182 12 8 371 22 373 3.85e-74 235
MS.gene058694.t1 MTR_1g055135 41.979 374 198 8 8 375 12 372 1.13e-73 234
MS.gene058694.t1 MTR_4g023070 41.470 381 185 11 9 371 3 363 7.17e-73 231
MS.gene058694.t1 MTR_8g433040 41.910 377 180 15 4 372 13 358 2.13e-72 230
MS.gene058694.t1 MTR_8g032380 41.910 377 180 15 4 372 13 358 2.13e-72 230
MS.gene058694.t1 MTR_4g109270 42.857 378 187 12 3 372 2 358 4.92e-72 229
MS.gene058694.t1 MTR_4g122850 43.526 363 181 15 20 373 12 359 9.86e-72 229
MS.gene058694.t1 MTR_5g097210 41.379 377 196 11 1 372 1 357 1.54e-71 228
MS.gene058694.t1 MTR_4g117750 42.582 364 176 11 22 375 16 356 2.66e-71 231
MS.gene058694.t1 MTR_4g117750 44.928 138 54 8 251 372 346 477 1.26e-14 75.5
MS.gene058694.t1 MTR_4g023130 38.503 374 156 11 3 371 2 306 3.50e-71 225
MS.gene058694.t1 MTR_7g079420 51.264 277 88 7 106 375 905 1141 7.85e-71 240
MS.gene058694.t1 MTR_4g023120 41.270 378 184 12 12 371 6 363 3.24e-70 224
MS.gene058694.t1 MTR_8g032390 42.216 379 172 15 1 372 31 369 1.28e-69 223
MS.gene058694.t1 MTR_4g118380 42.450 351 166 10 22 350 21 357 8.40e-68 218
MS.gene058694.t1 MTR_4g023190 43.864 383 171 17 2 372 3 353 9.35e-68 218
MS.gene058694.t1 MTR_4g023150 42.670 382 178 15 2 372 3 354 8.48e-67 215
MS.gene058694.t1 MTR_4g116330 40.103 389 145 15 3 372 16 335 2.03e-66 214
MS.gene058694.t1 MTR_4g117770 40.314 382 194 12 3 372 2 361 4.34e-66 214
MS.gene058694.t1 MTR_4g117810 40.314 382 194 12 3 372 2 361 4.34e-66 214
MS.gene058694.t1 MTR_4g117780 39.791 382 196 15 3 372 2 361 8.06e-65 211
MS.gene058694.t1 MTR_4g023380 38.083 386 159 12 23 372 30 371 4.82e-64 209
MS.gene058694.t1 MTR_4g023200 42.105 361 168 16 23 372 24 354 7.46e-64 207
MS.gene058694.t1 MTR_4g023440 40.270 370 148 13 12 372 21 326 9.61e-63 204
MS.gene058694.t1 MTR_4g121580 39.683 378 167 14 6 368 8 339 4.49e-60 199
MS.gene058694.t1 MTR_8g013010 43.369 279 138 9 3 279 48 308 4.67e-58 191
MS.gene058694.t1 MTR_8g098830 48.168 191 92 3 186 375 34 218 1.48e-52 174
MS.gene058694.t1 MTR_1g055195 41.281 281 126 8 102 372 221 472 2.61e-50 176
MS.gene058694.t1 MTR_4g118400 37.954 303 139 9 75 372 36 294 6.97e-49 167
MS.gene058694.t1 MTR_4g117870 38.907 311 132 10 70 375 7 264 5.26e-48 164
MS.gene058694.t1 MTR_4g118370 43.580 257 109 8 119 373 33 255 1.38e-47 162
MS.gene058694.t1 MTR_4g116340 41.379 232 105 8 8 236 35 238 2.08e-43 151
MS.gene058694.t1 MTR_8g433030 46.188 223 104 9 155 372 125 336 1.00e-41 149
MS.gene058694.t1 MTR_8g433030 46.512 86 41 3 1 84 31 113 4.72e-13 70.1
MS.gene058694.t1 MTR_7g079450 59.848 132 50 2 241 372 3 131 1.36e-39 137
MS.gene058694.t1 MTR_4g116320 43.981 216 109 7 162 373 46 253 6.88e-38 137
MS.gene058694.t1 MTR_6g463430 45.833 192 93 7 184 372 13 196 2.07e-36 131
MS.gene058694.t1 MTR_1g055175 41.538 195 111 3 181 373 3 196 9.93e-36 129
MS.gene058694.t1 MTR_4g114700 36.704 267 108 9 107 369 9 218 3.74e-33 124
MS.gene058694.t1 MTR_1g055250 39.904 208 115 6 149 354 46 245 1.41e-31 122
MS.gene058694.t1 MTR_7g117720 37.727 220 103 7 1 215 1 191 2.20e-31 120
MS.gene058694.t1 MTR_7g117720 47.727 88 41 3 292 374 186 273 1.40e-12 67.8
MS.gene058694.t1 MTR_3g007410 31.111 315 180 14 12 314 55 344 2.03e-30 120
MS.gene058694.t1 MTR_3g007360 30.794 315 181 14 12 314 55 344 6.74e-30 119
MS.gene058694.t1 MTR_4g117530 35.458 251 110 7 124 372 47 247 8.96e-30 115
MS.gene058694.t1 MTR_8g040935 40.000 195 106 7 185 372 12 202 2.28e-29 113
MS.gene058694.t1 MTR_3g013740 29.794 339 181 13 4 314 39 348 8.89e-29 116
MS.gene058694.t1 MTR_3g007330 29.936 314 178 13 12 314 51 333 1.63e-28 115
MS.gene058694.t1 MTR_2g021150 28.117 377 228 15 12 370 17 368 2.23e-28 114
MS.gene058694.t1 MTR_1g055165 43.421 152 83 3 224 373 163 313 3.58e-28 112
MS.gene058694.t1 MTR_1g055165 42.446 139 75 4 1 135 1 138 6.64e-23 98.2
MS.gene058694.t1 MTR_4g133170 29.431 299 185 10 12 304 7 285 4.30e-27 111
MS.gene058694.t1 MTR_3g009310 29.747 316 188 12 4 309 36 327 6.10e-27 110
MS.gene058694.t1 MTR_4g107820 30.667 300 182 11 12 307 39 316 6.63e-27 110
MS.gene058694.t1 MTR_4g107780 30.667 300 182 11 12 307 39 316 6.63e-27 110
MS.gene058694.t1 MTR_4g107780 30.667 300 182 11 12 307 39 316 1.06e-26 110
MS.gene058694.t1 MTR_4g107820 30.667 300 182 11 12 307 39 316 1.08e-26 110
MS.gene058694.t1 MTR_3g007430 30.255 314 179 12 12 312 46 332 1.53e-26 109
MS.gene058694.t1 MTR_4g055060 27.108 332 197 12 2 314 22 327 2.36e-26 108
MS.gene058694.t1 MTR_6g065980 29.470 302 166 14 12 304 19 282 3.43e-26 108
MS.gene058694.t1 MTR_3g014570 28.107 338 191 14 6 320 19 327 5.25e-26 107
MS.gene058694.t1 MTR_3g014540 28.616 318 184 11 12 314 32 321 7.72e-26 107
MS.gene058694.t1 MTR_2g029990 27.568 370 236 13 12 370 54 402 7.97e-26 107
MS.gene058694.t1 MTR_1g068835 27.974 311 192 10 9 309 4 292 9.01e-26 107
MS.gene058694.t1 MTR_4g117430 40.559 143 62 5 119 261 15 134 4.12e-25 100
MS.gene058694.t1 MTR_4g108820 29.483 329 152 15 12 325 45 308 5.62e-25 103
MS.gene058694.t1 MTR_6g021880 28.382 377 218 16 20 370 31 381 9.15e-25 104
MS.gene058694.t1 MTR_8g467140 31.090 312 163 14 12 304 35 313 1.89e-24 102
MS.gene058694.t1 MTR_1g097560 28.460 383 214 17 6 370 33 373 3.02e-24 102
MS.gene058694.t1 MTR_4g118360 45.833 120 63 2 255 372 1 120 3.38e-24 96.7
MS.gene058694.t1 MTR_7g407070 28.485 330 192 14 12 316 35 345 3.93e-24 102
MS.gene058694.t1 MTR_3g013770 30.233 344 169 15 4 314 24 329 5.53e-24 102
MS.gene058694.t1 MTR_5g022420 29.781 319 176 15 1 306 15 298 1.19e-23 101
MS.gene058694.t1 MTR_5g011200 26.923 312 179 15 12 304 20 301 1.44e-23 100
MS.gene058694.t1 MTR_7g070440 29.063 320 186 13 12 311 10 308 1.54e-23 100
MS.gene058694.t1 MTR_1g068875 27.687 307 197 10 9 309 4 291 3.78e-23 99.8
MS.gene058694.t1 MTR_2g426090 27.070 314 198 11 9 304 6 306 4.03e-23 100
MS.gene058694.t1 MTR_3g036290 27.987 318 180 13 9 315 21 300 4.96e-23 99.4
MS.gene058694.t1 MTR_1g054725 27.500 320 179 15 7 304 18 306 5.39e-23 99.4
MS.gene058694.t1 MTR_7g017040 28.780 410 213 25 10 371 16 394 6.74e-23 99.4
MS.gene058694.t1 MTR_3g006670 30.719 306 174 12 12 304 52 332 9.33e-23 99.0
MS.gene058694.t1 MTR_4g061340 30.000 320 176 14 12 312 29 319 1.09e-22 98.6
MS.gene058694.t1 MTR_7g070830 26.277 411 239 14 12 371 24 421 1.14e-22 99.0
MS.gene058694.t1 MTR_3g009240 30.333 300 176 13 12 304 39 312 1.32e-22 98.2
MS.gene058694.t1 MTR_2g021155 27.171 357 226 13 12 356 39 373 1.41e-22 100
MS.gene058694.t1 MTR_2g055970 29.781 319 176 14 3 304 205 492 2.21e-22 99.0
MS.gene058694.t1 MTR_1g094210 28.462 390 212 19 5 370 52 398 2.93e-22 97.4
MS.gene058694.t1 MTR_3g011100 29.446 343 181 18 1 314 221 531 3.40e-22 98.6
MS.gene058694.t1 MTR_0464s0020 28.612 353 173 14 9 311 23 346 3.84e-22 97.4
MS.gene058694.t1 MTR_1g094210 28.900 391 209 20 5 367 52 401 4.34e-22 97.4
MS.gene058694.t1 MTR_7g091630 25.758 330 207 8 5 309 28 344 8.75e-22 96.7
MS.gene058694.t1 MTR_5g007610 27.900 319 207 12 5 313 36 341 9.80e-22 96.3
MS.gene058694.t1 MTR_7g070880 26.341 410 240 14 12 371 24 421 1.01e-21 96.3
MS.gene058694.t1 MTR_2g021190 27.667 300 191 9 12 304 24 304 1.04e-21 95.5
MS.gene058694.t1 MTR_3g007270 28.399 331 191 17 6 314 43 349 1.14e-21 95.9
MS.gene058694.t1 MTR_1g097330 29.085 306 179 13 12 307 19 296 1.15e-21 95.9
MS.gene058694.t1 MTR_2g426070 26.875 320 190 13 11 304 8 309 1.26e-21 95.9
MS.gene058694.t1 MTR_0115s0020 25.310 403 254 14 8 375 9 399 1.36e-21 95.5
MS.gene058694.t1 MTR_2g043410 28.698 338 180 10 9 311 22 333 1.45e-21 95.9
MS.gene058694.t1 MTR_5g057790 27.273 319 191 15 12 317 49 339 1.58e-21 95.5
MS.gene058694.t1 MTR_0267s0050 26.823 384 209 13 9 347 6 362 1.58e-21 95.5
MS.gene058694.t1 MTR_1g097490 29.938 324 195 13 2 320 42 338 3.35e-21 94.4
MS.gene058694.t1 MTR_0128s0020 28.280 343 180 15 1 309 10 320 3.67e-21 94.4
MS.gene058694.t1 MTR_7g055930 27.577 359 192 14 1 309 5 345 4.12e-21 94.4
MS.gene058694.t1 MTR_7g055870 27.577 359 192 14 1 309 5 345 6.81e-21 94.0
MS.gene058694.t1 MTR_3g010870 26.349 315 174 13 9 304 36 311 7.09e-21 93.6
MS.gene058694.t1 MTR_4g031770 26.557 305 186 10 12 304 7 285 7.63e-21 93.2
MS.gene058694.t1 MTR_5g057690 25.915 355 220 16 12 361 49 365 9.27e-21 93.2
MS.gene058694.t1 MTR_2g046920 26.893 383 233 13 5 370 20 372 9.55e-21 92.8
MS.gene058694.t1 MTR_2g024110 25.890 309 195 11 12 308 7 293 1.10e-20 92.8
MS.gene058694.t1 MTR_3g083640 26.974 304 180 13 12 304 58 330 1.27e-20 92.8
MS.gene058694.t1 MTR_1g068860 27.331 311 200 11 7 309 2 294 1.44e-20 92.4
MS.gene058694.t1 MTR_1g055070 29.242 277 162 13 3 259 42 304 1.67e-20 92.4
MS.gene058694.t1 MTR_1g050542 28.065 310 184 14 9 309 57 336 2.35e-20 92.0
MS.gene058694.t1 MTR_0064s0160 26.276 392 248 17 8 371 41 419 2.42e-20 92.4
MS.gene058694.t1 MTR_5g057710 26.593 361 221 16 12 361 49 376 2.70e-20 92.0
MS.gene058694.t1 MTR_6g055210 29.970 337 192 12 2 310 14 334 2.86e-20 92.0
MS.gene058694.t1 MTR_2g043400 29.586 338 177 13 9 311 23 334 3.13e-20 92.0
MS.gene058694.t1 MTR_3g006500 26.235 324 183 12 1 304 9 296 3.26e-20 91.3
MS.gene058694.t1 MTR_3g036430 27.211 294 166 11 12 304 23 269 3.75e-20 90.9
MS.gene058694.t1 MTR_2g006360 28.526 312 159 13 2 309 39 290 4.82e-20 90.9
MS.gene058694.t1 MTR_3g072470 27.536 345 179 12 9 311 19 334 5.62e-20 91.3
MS.gene058694.t1 MTR_2g028110 27.329 322 188 12 9 309 4 300 6.00e-20 90.9
MS.gene058694.t1 MTR_7g057270 26.471 340 179 13 12 309 29 339 6.14e-20 90.9
MS.gene058694.t1 MTR_6g017280 26.214 412 237 20 1 370 1 387 6.81e-20 90.5
MS.gene058694.t1 MTR_0044s0300 26.814 317 190 13 2 304 27 315 7.39e-20 90.5
MS.gene058694.t1 MTR_4g030830 26.647 334 193 12 1 304 1 312 7.94e-20 90.5
MS.gene058694.t1 MTR_2g078900 25.658 304 185 10 12 304 36 309 9.15e-20 89.7
MS.gene058694.t1 MTR_3g083010 26.634 413 237 18 9 375 6 398 9.15e-20 90.5
MS.gene058694.t1 MTR_2g426020 27.157 394 232 16 8 369 5 375 9.37e-20 90.5
MS.gene058694.t1 MTR_4g117550 26.448 397 228 15 2 371 10 369 9.99e-20 90.1
MS.gene058694.t1 MTR_3g024110 26.518 313 187 10 12 314 104 383 1.19e-19 90.5
MS.gene058694.t1 MTR_1g054575 29.032 310 169 13 9 302 51 325 1.26e-19 90.9
MS.gene058694.t1 MTR_7g013590 27.632 304 187 13 12 304 39 320 1.42e-19 89.7
MS.gene058694.t1 MTR_7g056003 26.866 335 189 10 9 311 15 325 1.46e-19 89.7
MS.gene058694.t1 MTR_0129s0070 26.119 402 248 17 1 371 9 392 1.49e-19 89.7
MS.gene058694.t1 MTR_3g010970 26.250 320 179 12 12 316 51 328 1.54e-19 89.7
MS.gene058694.t1 MTR_2g031720 26.875 320 187 14 6 304 2 295 1.63e-19 89.7
MS.gene058694.t1 MTR_7g056290 29.060 351 167 16 9 311 22 338 1.74e-19 89.7
MS.gene058694.t1 MTR_2g028140 28.198 344 174 18 6 304 2 317 2.05e-19 89.4
MS.gene058694.t1 MTR_2g028130 27.273 330 199 15 6 309 2 316 2.07e-19 89.4
MS.gene058694.t1 MTR_1g056710 26.710 307 182 14 12 304 37 314 2.19e-19 89.0
MS.gene058694.t1 MTR_3g013950 26.302 384 213 14 9 347 6 364 2.31e-19 89.0
MS.gene058694.t1 MTR_3g010390 28.228 333 180 16 12 313 36 340 2.45e-19 89.0
MS.gene058694.t1 MTR_3g437520 27.887 355 176 14 9 311 23 349 2.46e-19 89.7
MS.gene058694.t1 MTR_0667s0010 24.691 324 195 12 6 304 3 302 2.69e-19 89.0
MS.gene058694.t1 MTR_2g021800 25.120 418 243 16 6 371 13 412 2.76e-19 89.0
MS.gene058694.t1 MTR_8g099460 27.864 323 194 15 6 309 2 304 2.83e-19 89.0
MS.gene058694.t1 MTR_2g046900 27.273 385 237 16 5 370 24 384 2.87e-19 89.0
MS.gene058694.t1 MTR_3g436150 26.765 340 193 15 6 314 23 337 3.69e-19 88.6
MS.gene058694.t1 MTR_1g088120 27.193 342 177 11 12 309 13 326 3.78e-19 88.6
MS.gene058694.t1 MTR_6g004660 26.546 388 239 12 8 370 14 380 5.01e-19 88.2
MS.gene058694.t1 MTR_6g007135 26.166 386 239 14 9 370 26 389 5.23e-19 88.2
MS.gene058694.t1 MTR_7g016930 28.000 325 193 15 3 310 10 310 6.08e-19 87.0
MS.gene058694.t1 MTR_7g060940 26.822 343 185 12 3 311 16 326 8.71e-19 87.4
MS.gene058694.t1 MTR_4g070550 29.042 334 178 18 6 304 2 311 1.02e-18 87.4
MS.gene058694.t1 MTR_3g006570 26.948 308 199 12 3 304 14 301 1.38e-18 86.7
MS.gene058694.t1 MTR_7g066030 25.659 417 232 14 4 371 16 403 1.46e-18 87.0
MS.gene058694.t1 MTR_3g030330 26.578 301 182 11 12 304 23 292 1.72e-18 86.3
MS.gene058694.t1 MTR_2g028160 27.976 336 193 17 6 309 2 320 1.92e-18 86.7
MS.gene058694.t1 MTR_1g442850 28.746 327 172 12 9 304 5 301 2.07e-18 86.3
MS.gene058694.t1 MTR_1g055375 25.159 314 200 15 7 306 2 294 2.48e-18 85.9
MS.gene058694.t1 MTR_8g101580 26.509 381 229 17 10 370 45 394 2.66e-18 85.9
MS.gene058694.t1 MTR_2g025420 25.441 397 234 16 9 368 6 377 2.73e-18 86.3
MS.gene058694.t1 MTR_7g069550 25.416 421 226 19 1 367 5 391 2.82e-18 85.9
MS.gene058694.t1 MTR_2g426060 27.616 344 172 18 9 309 6 315 2.99e-18 85.9
MS.gene058694.t1 MTR_1g112930 26.578 301 179 13 13 302 29 298 3.01e-18 85.9
MS.gene058694.t1 MTR_2g461450 26.688 311 194 9 7 311 16 298 3.25e-18 85.5
MS.gene058694.t1 MTR_7g077970 24.665 373 216 13 9 342 7 353 3.52e-18 85.9
MS.gene058694.t1 MTR_6g034720 44.262 122 58 4 130 251 53 164 3.77e-18 82.8
MS.gene058694.t1 MTR_7g066100 25.648 386 258 9 12 372 14 395 4.44e-18 85.5
MS.gene058694.t1 MTR_2g021050 26.984 315 179 12 6 304 2 281 4.61e-18 85.1
MS.gene058694.t1 MTR_5g046300 25.559 313 173 14 12 304 7 279 5.09e-18 84.7
MS.gene058694.t1 MTR_5g046290 25.559 313 173 14 12 304 7 279 5.09e-18 84.7
MS.gene058694.t1 MTR_5g037680 24.697 413 231 16 4 370 3 381 5.32e-18 85.5
MS.gene058694.t1 MTR_5g057020 26.667 315 191 14 12 323 49 326 5.34e-18 84.7
MS.gene058694.t1 MTR_6g027910 24.138 377 254 10 12 370 12 374 6.06e-18 84.7
MS.gene058694.t1 MTR_3g030240 24.510 306 174 12 12 304 43 304 6.29e-18 84.7
MS.gene058694.t1 MTR_4g030980 26.087 368 184 15 6 309 11 354 7.59e-18 85.1
MS.gene058694.t1 MTR_3g010590 25.574 305 175 11 12 304 42 306 8.13e-18 84.3
MS.gene058694.t1 MTR_3g464500 26.667 330 193 10 6 309 23 329 1.01e-17 84.3
MS.gene058694.t1 MTR_8g062660 25.938 320 196 12 1 302 13 309 1.03e-17 85.1
MS.gene058694.t1 MTR_3g009260 26.752 314 184 13 12 313 44 323 1.13e-17 84.0
MS.gene058694.t1 MTR_2g021770 24.590 427 239 16 1 371 4 403 1.51e-17 84.0
MS.gene058694.t1 MTR_5g023000 52.809 89 39 2 286 372 6 93 1.69e-17 77.4
MS.gene058694.t1 MTR_3g024040 26.688 311 180 10 15 314 37 310 1.72e-17 83.6
MS.gene058694.t1 MTR_0054s0090 22.794 408 232 17 17 371 25 402 1.74e-17 83.6
MS.gene058694.t1 MTR_2g046830 30.000 320 180 16 5 310 21 310 1.85e-17 83.6
MS.gene058694.t1 MTR_7g055987 26.807 332 176 11 9 311 20 313 1.96e-17 83.2
MS.gene058694.t1 MTR_4g129190 25.513 341 193 12 5 311 2 315 2.01e-17 83.6
MS.gene058694.t1 MTR_3g011060 27.469 324 170 13 12 304 31 320 2.16e-17 83.2
MS.gene058694.t1 MTR_5g096630 25.568 352 195 14 1 307 10 339 2.30e-17 83.6
MS.gene058694.t1 MTR_3g011120 27.027 333 199 13 2 312 7 317 2.90e-17 82.8
MS.gene058694.t1 MTR_2g104340 25.815 399 242 16 8 371 13 392 3.08e-17 82.8
MS.gene058694.t1 MTR_3g010520 26.452 310 177 13 4 304 19 286 3.18e-17 82.4
MS.gene058694.t1 MTR_7g056820 25.714 385 210 17 6 347 3 354 4.68e-17 82.0
MS.gene058694.t1 MTR_0129s0120 25.806 403 254 15 2 375 10 396 5.22e-17 82.0
MS.gene058694.t1 MTR_2g047832 28.955 335 184 17 5 310 25 334 5.47e-17 82.4
MS.gene058694.t1 MTR_0129s0050 26.277 411 249 17 2 371 7 404 5.80e-17 82.0
MS.gene058694.t1 MTR_6g016285 25.434 346 183 14 9 309 20 335 6.64e-17 82.0
MS.gene058694.t1 MTR_3g058480 26.792 265 154 7 12 259 42 283 6.85e-17 81.3
MS.gene058694.t1 MTR_5g069390 25.243 412 242 18 4 369 20 411 7.48e-17 82.4
MS.gene058694.t1 MTR_3g023930 26.606 327 154 17 4 304 28 294 8.42e-17 81.3
MS.gene058694.t1 MTR_5g097680 25.287 435 241 18 1 371 9 423 8.65e-17 81.6
MS.gene058694.t1 MTR_4g014370 22.038 422 259 15 1 371 3 405 9.72e-17 81.6
MS.gene058694.t1 MTR_2g425980 26.933 401 223 22 9 369 5 375 9.77e-17 81.6
MS.gene058694.t1 MTR_3g464470 26.606 327 194 11 6 309 3 306 9.86e-17 81.3
MS.gene058694.t1 MTR_8g073550 29.064 203 113 7 12 202 33 216 1.03e-16 79.0
MS.gene058694.t1 MTR_2g021252 25.743 303 179 12 12 304 50 316 1.11e-16 81.3
MS.gene058694.t1 MTR_1g115160 25.962 312 183 12 7 306 20 295 1.14e-16 80.9
MS.gene058694.t1 MTR_0760s0010 25.581 344 199 12 14 344 52 351 1.17e-16 81.3
MS.gene058694.t1 MTR_5g097350 26.121 379 235 14 18 371 25 383 1.19e-16 80.9
MS.gene058694.t1 MTR_7g056797 28.354 328 196 14 6 309 20 332 1.33e-16 80.9
MS.gene058694.t1 MTR_3g036335 25.246 305 190 10 12 304 44 322 1.55e-16 80.9
MS.gene058694.t1 MTR_4g024890 25.455 330 205 12 1 309 1 310 1.56e-16 80.9
MS.gene058694.t1 MTR_7g066000 25.538 325 196 10 12 309 28 333 1.64e-16 80.9
MS.gene058694.t1 MTR_7g007300 27.532 316 159 15 12 304 106 374 1.74e-16 80.9
MS.gene058694.t1 MTR_0097s0030 25.134 374 221 14 6 348 11 356 1.87e-16 80.5
MS.gene058694.t1 MTR_2g047240 25.134 374 221 14 6 348 11 356 1.87e-16 80.5
MS.gene058694.t1 MTR_6g090180 23.844 411 254 15 3 371 41 434 2.51e-16 80.5
MS.gene058694.t1 MTR_4g013180 28.035 346 190 16 6 316 7 328 2.62e-16 80.5
MS.gene058694.t1 MTR_4g122860 32.474 194 84 9 191 372 156 314 2.96e-16 79.3
MS.gene058694.t1 MTR_2g047892 26.331 338 178 14 9 308 21 325 2.99e-16 80.1
MS.gene058694.t1 MTR_5g069930 24.545 330 199 13 7 311 4 308 2.99e-16 79.7
MS.gene058694.t1 MTR_7g056200 25.378 331 176 10 7 309 21 308 3.36e-16 79.7
MS.gene058694.t1 MTR_3g024150 26.433 314 171 16 12 304 38 312 4.12e-16 79.3
MS.gene058694.t1 MTR_7g078860 26.686 341 190 16 5 309 4 320 4.62e-16 79.3
MS.gene058694.t1 MTR_5g043160 28.319 339 185 15 12 306 53 377 5.28e-16 79.7
MS.gene058694.t1 MTR_7g091640 25.148 338 193 11 6 309 32 343 5.30e-16 79.0
MS.gene058694.t1 MTR_3g010920 25.000 384 220 18 7 370 46 381 5.41e-16 79.0
MS.gene058694.t1 MTR_7g062100 27.586 319 189 13 12 309 27 324 6.38e-16 79.0
MS.gene058694.t1 MTR_8g063370 23.650 389 256 14 1 367 15 384 6.63e-16 79.0
MS.gene058694.t1 MTR_3g030250 24.252 301 186 9 12 304 40 306 7.46e-16 78.6
MS.gene058694.t1 MTR_4g013175 24.878 410 204 15 12 347 13 392 7.59e-16 79.0
MS.gene058694.t1 MTR_0054s0100 23.929 397 239 16 17 369 25 402 8.50e-16 78.6
MS.gene058694.t1 MTR_7g052150 25.872 344 182 14 4 311 16 322 8.88e-16 78.6
MS.gene058694.t1 MTR_2g022000 23.487 413 247 14 6 367 13 407 9.80e-16 78.6
MS.gene058694.t1 MTR_4g080200 24.444 360 223 14 7 350 1 327 1.00e-15 77.8
MS.gene058694.t1 MTR_2g025960 28.054 221 125 10 104 304 5 211 1.05e-15 77.4
MS.gene058694.t1 MTR_0649s0020 25.260 384 214 14 9 347 10 365 1.14e-15 78.2
MS.gene058694.t1 MTR_4g102410 23.485 396 255 14 3 360 55 440 1.17e-15 78.6
MS.gene058694.t1 MTR_5g068040 28.086 324 169 13 12 309 19 304 1.20e-15 78.2
MS.gene058694.t1 MTR_7g066010 25.667 300 166 11 4 268 16 293 1.43e-15 77.8
MS.gene058694.t1 MTR_7g056760 26.269 335 194 15 7 309 21 334 1.54e-15 77.8
MS.gene058694.t1 MTR_4g028510 25.513 341 203 16 2 304 6 333 1.59e-15 78.2
MS.gene058694.t1 MTR_2g038680 24.574 411 242 16 10 371 16 407 1.64e-15 77.8
MS.gene058694.t1 MTR_7g061060 25.797 345 180 13 6 311 10 317 1.77e-15 77.8
MS.gene058694.t1 MTR_1g071010 23.288 365 227 12 12 344 18 361 1.98e-15 77.4
MS.gene058694.t1 MTR_7g028660 25.959 339 176 15 9 307 10 313 1.98e-15 77.4
MS.gene058694.t1 MTR_7g066850 26.462 325 192 13 9 309 22 323 2.11e-15 77.8
MS.gene058694.t1 MTR_5g097220 25.592 422 241 19 1 371 5 404 2.20e-15 77.4
MS.gene058694.t1 MTR_7g056260 26.506 332 184 11 9 309 14 316 2.24e-15 76.6
MS.gene058694.t1 MTR_4g030110 25.641 351 186 14 1 320 21 327 2.61e-15 77.0
MS.gene058694.t1 MTR_3g010430 25.234 321 190 13 3 304 29 318 3.28e-15 77.0
MS.gene058694.t1 MTR_3g030350 27.243 301 185 15 12 304 38 312 3.40e-15 76.6
MS.gene058694.t1 MTR_4g011660 26.593 361 175 14 6 309 16 343 3.84e-15 76.6
MS.gene058694.t1 MTR_5g097330 24.631 406 255 13 2 371 9 399 4.09e-15 76.6
MS.gene058694.t1 MTR_7g079640 25.700 393 204 20 1 350 5 352 5.33e-15 76.3
MS.gene058694.t1 MTR_5g069760 25.767 326 195 13 7 311 4 303 5.91e-15 75.9
MS.gene058694.t1 MTR_3g009300 27.653 311 162 14 12 313 37 293 7.37e-15 75.5
MS.gene058694.t1 MTR_4g129160 24.405 336 198 10 13 309 12 330 7.79e-15 75.5
MS.gene058694.t1 MTR_5g046260 23.390 295 172 13 12 304 7 249 7.96e-15 74.7
MS.gene058694.t1 MTR_7g078040 26.796 362 192 15 1 311 1 340 9.07e-15 75.9
MS.gene058694.t1 MTR_3g010620 25.161 310 174 12 9 304 36 301 1.00e-14 75.5
MS.gene058694.t1 MTR_4g055820 23.513 353 203 11 1 307 6 337 1.26e-14 74.7
MS.gene058694.t1 MTR_2g031680 24.516 310 187 13 12 304 9 288 1.32e-14 75.1
MS.gene058694.t1 MTR_5g027330 23.975 317 196 11 13 304 44 340 1.42e-14 75.1
MS.gene058694.t1 MTR_5g027370 23.824 319 198 11 13 306 33 331 1.94e-14 74.7
MS.gene058694.t1 MTR_4g019990 24.925 333 191 11 12 309 9 317 2.15e-14 74.3
MS.gene058694.t1 MTR_7g061050 24.924 329 196 9 6 309 10 312 2.48e-14 73.9
MS.gene058694.t1 MTR_4g037465 24.538 379 228 14 9 351 20 376 2.60e-14 73.9
MS.gene058694.t1 MTR_7g062060 24.760 416 242 16 5 371 7 400 2.62e-14 73.9
MS.gene058694.t1 MTR_5g094350 24.727 275 164 10 12 260 16 273 2.63e-14 72.8
MS.gene058694.t1 MTR_7g055977 25.000 408 232 16 7 371 5 381 2.80e-14 73.9
MS.gene058694.t1 MTR_0242s0060 25.872 344 195 13 1 306 1 322 2.82e-14 73.9
MS.gene058694.t1 MTR_0242s0040 25.872 344 195 13 1 306 1 322 2.82e-14 73.9
MS.gene058694.t1 MTR_8g464770 25.945 397 240 19 4 372 7 377 3.10e-14 73.9
MS.gene058694.t1 MTR_1g061330 24.611 386 235 16 9 371 4 356 4.23e-14 73.6
MS.gene058694.t1 MTR_3g011650 27.948 229 129 10 12 232 82 282 5.12e-14 72.0
MS.gene058694.t1 MTR_8g064890 27.964 329 187 14 12 312 19 325 7.25e-14 72.8
MS.gene058694.t1 MTR_4g013185 25.507 345 191 13 12 309 13 338 7.34e-14 72.8
MS.gene058694.t1 MTR_4g030090 26.266 316 193 13 12 304 17 315 7.86e-14 72.8
MS.gene058694.t1 MTR_5g022045 24.029 412 240 17 13 375 39 426 9.06e-14 72.8
MS.gene058694.t1 MTR_3g023940 22.857 385 233 13 12 370 37 383 1.10e-13 72.0
MS.gene058694.t1 MTR_2g010920 25.220 341 209 12 7 309 18 350 1.13e-13 72.4
MS.gene058694.t1 MTR_4g030760 23.939 330 207 11 2 320 66 362 1.37e-13 72.0
MS.gene058694.t1 MTR_2g026010 27.711 332 188 17 7 314 2 305 1.51e-13 71.6
MS.gene058694.t1 MTR_5g057643 28.194 227 128 11 12 227 49 251 1.95e-13 70.1
MS.gene058694.t1 MTR_2g033410 26.689 296 180 12 12 296 12 281 2.00e-13 71.2
MS.gene058694.t1 MTR_7g078840 25.562 356 183 13 12 309 13 344 2.07e-13 71.6
MS.gene058694.t1 MTR_8g046310 26.625 323 188 15 8 307 15 311 2.09e-13 71.2
MS.gene058694.t1 MTR_7g077070 24.859 354 208 13 6 317 13 350 2.32e-13 71.2
MS.gene058694.t1 MTR_3g006530 24.437 311 188 11 12 304 43 324 2.44e-13 71.2
MS.gene058694.t1 MTR_6g079810 23.590 390 255 17 17 371 78 459 2.74e-13 71.2
MS.gene058694.t1 MTR_1g114700 26.115 314 183 14 12 306 32 315 3.17e-13 70.9
MS.gene058694.t1 MTR_8g063440 24.545 330 216 10 3 312 6 322 3.18e-13 70.9
MS.gene058694.t1 MTR_4g006270 24.590 305 173 11 12 302 7 268 3.23e-13 70.9
MS.gene058694.t1 MTR_2g047200 25.816 337 189 17 9 311 19 328 3.24e-13 70.9
MS.gene058694.t1 MTR_3g058440 27.559 254 146 10 12 249 38 269 3.25e-13 70.1
MS.gene058694.t1 MTR_7g061090 25.501 349 182 14 7 309 20 336 3.46e-13 70.9
MS.gene058694.t1 MTR_3g030310 24.921 317 180 13 12 304 24 306 4.15e-13 70.5
MS.gene058694.t1 MTR_7g022600 25.507 345 199 13 6 309 20 347 4.50e-13 70.5
MS.gene058694.t1 MTR_2g031700 25.000 228 136 6 12 232 9 208 5.60e-13 69.3
MS.gene058694.t1 MTR_6g053240 24.375 320 181 13 12 304 31 316 6.52e-13 70.1
MS.gene058694.t1 MTR_1g055200 45.745 94 37 4 104 196 6 86 6.97e-13 64.7
MS.gene058694.t1 MTR_6g461660 24.438 356 203 13 3 316 13 344 7.00e-13 69.7
MS.gene058694.t1 MTR_2g021210 24.759 311 192 12 4 304 78 356 8.54e-13 69.7
MS.gene058694.t1 MTR_3g009250 27.074 229 130 9 12 232 44 243 9.80e-13 67.8
MS.gene058694.t1 MTR_2g010900 25.159 314 185 11 27 309 1 295 9.98e-13 69.3
MS.gene058694.t1 MTR_8g467670 24.103 390 250 16 2 368 6 372 1.13e-12 69.3
MS.gene058694.t1 MTR_5g096910 21.554 399 257 11 6 371 14 389 1.22e-12 68.9
MS.gene058694.t1 MTR_4g008790 25.070 355 173 12 12 309 42 360 1.63e-12 68.9
MS.gene058694.t1 MTR_2g437110 24.924 329 195 14 9 309 21 325 1.94e-12 68.9
MS.gene058694.t1 MTR_7g056737 28.529 340 179 13 3 309 9 317 2.07e-12 68.6
MS.gene058694.t1 MTR_7g078900 26.765 340 187 13 12 309 15 334 2.34e-12 68.2
MS.gene058694.t1 MTR_6g053260 24.516 310 188 10 12 304 340 620 2.36e-12 68.9
MS.gene058694.t1 MTR_7g050480 26.074 326 182 13 6 304 19 312 3.13e-12 67.8
MS.gene058694.t1 MTR_4g028660 25.501 349 204 17 2 312 6 336 3.38e-12 67.8
MS.gene058694.t1 MTR_4g027450 25.501 349 204 17 2 312 6 336 3.38e-12 67.8
MS.gene058694.t1 MTR_7g050520 25.767 326 183 13 6 304 19 312 4.11e-12 67.4
MS.gene058694.t1 MTR_3g010870 25.833 240 123 11 9 230 36 238 4.41e-12 66.6
MS.gene058694.t1 MTR_1g053510 25.581 430 221 22 5 372 11 403 5.68e-12 67.0
MS.gene058694.t1 MTR_6g048120 24.595 309 196 11 12 304 39 326 6.18e-12 67.0
MS.gene058694.t1 MTR_5g064700 24.648 284 175 11 115 371 93 364 6.30e-12 66.6
MS.gene058694.t1 MTR_7g078050 35.772 123 67 5 12 125 9 128 7.36e-12 65.5
MS.gene058694.t1 MTR_8g012090 24.471 331 177 12 6 307 13 299 9.50e-12 65.9
MS.gene058694.t1 MTR_4g023430 43.750 80 43 2 3 81 35 113 1.25e-11 64.3
MS.gene058694.t1 MTR_2g021950 23.544 412 248 15 2 371 7 393 1.39e-11 65.9
MS.gene058694.t1 MTR_6g092560 23.270 318 201 9 12 304 15 314 2.14e-11 65.5
MS.gene058694.t1 MTR_5g008530 56.364 55 21 1 6 60 15 66 3.14e-11 59.3
MS.gene058694.t1 MTR_5g072060 24.685 397 234 17 8 374 5 366 3.16e-11 65.1
MS.gene058694.t1 MTR_2g047878 26.020 392 212 20 9 370 20 363 3.38e-11 64.3
MS.gene058694.t1 MTR_3g058470 23.548 310 170 7 12 304 40 299 3.81e-11 64.3
MS.gene058694.t1 MTR_7g055850 30.542 203 98 9 1 168 5 199 3.93e-11 63.5
MS.gene058694.t1 MTR_1g115185 23.810 315 188 9 12 306 42 324 4.93e-11 64.3
MS.gene058694.t1 MTR_5g057040 26.619 278 169 11 12 278 49 302 6.81e-11 64.3
MS.gene058694.t1 MTR_1g029650 23.342 377 233 14 9 351 8 362 7.02e-11 63.5
MS.gene058694.t1 MTR_5g074850 26.543 324 190 14 17 304 43 354 7.34e-11 64.3
MS.gene058694.t1 MTR_5g023570 36.697 109 64 3 7 114 34 138 9.51e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058694.t1 AT3G06240 27.316 421 224 19 2 370 29 419 1.99e-25 107
MS.gene058694.t1 AT3G23880 27.476 313 198 10 3 306 7 299 2.25e-19 89.0
MS.gene058694.t1 AT4G12560 24.740 384 242 13 12 369 7 369 8.23e-18 84.7
MS.gene058694.t1 AT4G12560 24.740 384 242 13 12 369 7 369 8.23e-18 84.7
MS.gene058694.t1 AT4G12560 24.740 384 242 13 12 369 7 369 8.23e-18 84.7
MS.gene058694.t1 AT1G33530 26.498 317 166 17 10 305 97 367 3.87e-15 77.0
MS.gene058694.t1 AT5G49610 28.808 302 172 15 12 300 12 283 3.99e-15 76.3
MS.gene058694.t1 AT1G12870 25.329 304 194 14 6 294 30 315 2.67e-13 71.2

Find 86 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATTGTCCTTGATTTAA+AGG 0.115001 7.4:+26519567 MS.gene058694:CDS
AAATCAATGGATAAGGTTTC+AGG 0.212005 7.4:-26519049 None:intergenic
AAAGTGTAAAGTTGCAAAAT+TGG 0.223079 7.4:-26518972 None:intergenic
CTCTGTATACACGACCATTT+TGG 0.240682 7.4:-26519920 None:intergenic
ATAGTCATTATAGCATTTAT+AGG 0.282447 7.4:-26519356 None:intergenic
CTGACAAAGGCTTCTATCTA+TGG 0.300497 7.4:+26519185 MS.gene058694:CDS
TTCTATACAATATGATTTGT+TGG 0.329655 7.4:+26519639 MS.gene058694:CDS
AGGATTTCTGTTATCACTTC+CGG 0.338610 7.4:-26518875 None:intergenic
CAAGAACAACCCAACTTTGT+TGG 0.347764 7.4:-26519494 None:intergenic
ACATGGATACAGTGGAGATT+TGG 0.352479 7.4:+26519695 MS.gene058694:CDS
CTTGAATGGGGCTATTCATT+GGG 0.357670 7.4:+26519513 MS.gene058694:CDS
CCTAGGTCACCTATGACTAT+TGG 0.359555 7.4:+26519238 MS.gene058694:CDS
TCTTGAATGGGGCTATTCAT+TGG 0.366732 7.4:+26519512 MS.gene058694:CDS
ACAAATTGTGGTGATATAGT+TGG 0.377094 7.4:+26519808 MS.gene058694:CDS
AAAGTTGGGTTGTTCTTGAA+TGG 0.378544 7.4:+26519499 MS.gene058694:CDS
AAGTGTAAAGTTGCAAAATT+GGG 0.380787 7.4:-26518971 None:intergenic
AAGAAGCGTGCATCTGCTTC+CGG 0.386581 7.4:+26518856 MS.gene058694:CDS
ACTTCACCGGCAACCTCAAT+AGG 0.386853 7.4:-26518895 None:intergenic
CAATCCAATCAAACGCTAGT+AGG 0.397210 7.4:-26519958 None:intergenic
TTAGTATTAATGACCATATA+AGG 0.398204 7.4:-26519463 None:intergenic
TATGATTTGTTGGTGCTTGA+TGG 0.399308 7.4:+26519649 MS.gene058694:CDS
TGAAGTATGTACTACGTTAC+AGG 0.406160 7.4:+26518912 MS.gene058694:CDS
TTGTCGTTTCCTTTAAATCA+AGG 0.413492 7.4:-26519576 None:intergenic
AACAGATGGTTATGATGAAT+TGG 0.415086 7.4:+26519831 MS.gene058694:CDS
CTAGAGAATCTCTCATATCT+TGG 0.421290 7.4:+26519880 MS.gene058694:CDS
AAGTTGGGTTGTTCTTGAAT+GGG 0.426332 7.4:+26519500 MS.gene058694:CDS
CATGGATACAGTGGAGATTT+GGG 0.428250 7.4:+26519696 MS.gene058694:CDS
GTGACCTAGGTATTTGTTTG+TGG 0.437568 7.4:-26519225 None:intergenic
ACCTTCAACTGATGATTACT+TGG 0.439135 7.4:+26519321 MS.gene058694:CDS
AGAAATCCTATTGAGGTTGC+CGG 0.439306 7.4:+26518889 MS.gene058694:CDS
AATATGCAGTGCATTCATCT+TGG 0.443353 7.4:+26519728 MS.gene058694:CDS
AATCGTCCTTCCAACAAAGT+TGG 0.444065 7.4:+26519484 MS.gene058694:CDS
ATCGTCCTTCCAACAAAGTT+GGG 0.448542 7.4:+26519485 MS.gene058694:CDS
CTACACGAACCTCCGATTTG+AGG 0.448833 7.4:-26519142 None:intergenic
CACAATTTGTAAAGTATACT+AGG 0.449978 7.4:-26519795 None:intergenic
TGCATCAAAATCAATGGATA+AGG 0.452169 7.4:-26519056 None:intergenic
GCTATCTAGTTTGAGTAACT+TGG 0.455895 7.4:+26519384 MS.gene058694:CDS
TCTCATTGAGAGCTAATAAG+TGG 0.462649 7.4:+26519413 MS.gene058694:CDS
AGCTTGATTCCAATAGTCAT+AGG 0.463496 7.4:-26519247 None:intergenic
CTCCGATTTGAGGATGTTGT+TGG 0.463805 7.4:-26519132 None:intergenic
ATGATTTGTTGGTGCTTGAT+GGG 0.469175 7.4:+26519650 MS.gene058694:CDS
ACAGGTGTGTTTGCAAATCA+TGG 0.470956 7.4:+26518930 MS.gene058694:CDS
AATCAATGGATAAGGTTTCA+GGG 0.476772 7.4:-26519048 None:intergenic
CTAGTATACTTTACAAATTG+TGG 0.480538 7.4:+26519796 MS.gene058694:CDS
CACCAACAACATCCTCAAAT+CGG 0.482160 7.4:+26519130 MS.gene058694:CDS
AATCATGTCCTATGGACAAA+AGG 0.485590 7.4:-26519021 None:intergenic
ACTAGGAAGAAGTCCGGATC+AGG 0.485708 7.4:-26519778 None:intergenic
AAGAGATGCATCAAAATCAA+TGG 0.496420 7.4:-26519062 None:intergenic
AAGTGGAAACAAGTTGAGGT+TGG 0.500735 7.4:+26519430 MS.gene058694:CDS
AGGGAAACAATCATGTCCTA+TGG 0.504035 7.4:-26519029 None:intergenic
GACAATAATAACAACAATGT+TGG 0.505308 7.4:-26519554 None:intergenic
AGGTATTTGTTTGTGGACTC+CGG 0.506163 7.4:-26519218 None:intergenic
GTGATCCATAAAATCAAGGA+TGG 0.510701 7.4:-26519110 None:intergenic
GAATGGGGCTATTCATTGGG+TGG 0.513164 7.4:+26519516 MS.gene058694:CDS
TCAAATCGGAGGTTCGTGTA+GGG 0.517509 7.4:+26519144 MS.gene058694:CDS
TTGGTGAAGTTTAATTACAA+AGG 0.525559 7.4:+26519850 MS.gene058694:CDS
AAGTATACTAGGAAGAAGTC+CGG 0.536637 7.4:-26519784 None:intergenic
AACAACCCAACTTTGTTGGA+AGG 0.537379 7.4:-26519490 None:intergenic
AATGCTATAATGACTATGAT+CGG 0.553176 7.4:+26519362 MS.gene058694:CDS
ACCAAGTAATCATCAGTTGA+AGG 0.553454 7.4:-26519322 None:intergenic
AATCCAATCAAACGCTAGTA+GGG 0.554460 7.4:-26519957 None:intergenic
AAATCGGAGGTTCGTGTAGG+GGG 0.555926 7.4:+26519146 MS.gene058694:CDS
TGTTTGTGGACTCCGGTGGA+TGG 0.562979 7.4:-26519211 None:intergenic
CCAATAGTCATAGGTGACCT+AGG 0.574680 7.4:-26519238 None:intergenic
AGTTGGGTTGTTCTTGAATG+GGG 0.579967 7.4:+26519501 MS.gene058694:CDS
TAACGTAGTACATACTTCAC+CGG 0.582782 7.4:-26518908 None:intergenic
GTTGGTGATCCATAAAATCA+AGG 0.583053 7.4:-26519114 None:intergenic
TCCATAAAATCAAGGATGGG+TGG 0.589372 7.4:-26519106 None:intergenic
TAGTGCATGGACTGTGGACA+TGG 0.590116 7.4:+26519678 MS.gene058694:CDS
ATGAGAGATTCTCTAGCAGA+TGG 0.590655 7.4:-26519873 None:intergenic
GGTGATATAGTTGGAACAGA+TGG 0.594143 7.4:+26519817 MS.gene058694:CDS
CAAATCGGAGGTTCGTGTAG+GGG 0.594552 7.4:+26519145 MS.gene058694:CDS
TTGATGGGCTTATTAGTGCA+TGG 0.605656 7.4:+26519665 MS.gene058694:CDS
TGATAACAGAAATCCTATTG+AGG 0.606738 7.4:+26518882 MS.gene058694:CDS
TATCTATGGAATCCATCCAC+CGG 0.610615 7.4:+26519199 MS.gene058694:CDS
CTCAAATCGGAGGTTCGTGT+AGG 0.620092 7.4:+26519143 MS.gene058694:CDS
TATGGACAAAAGGTTGTGTG+TGG 0.630555 7.4:-26519011 None:intergenic
TATTTGTTTGTGGACTCCGG+TGG 0.635344 7.4:-26519215 None:intergenic
TAATAAGTGGAAACAAGTTG+AGG 0.642343 7.4:+26519426 MS.gene058694:CDS
GAGTCCACAAACAAATACCT+AGG 0.656423 7.4:+26519221 MS.gene058694:CDS
TGATCCATAAAATCAAGGAT+GGG 0.658623 7.4:-26519109 None:intergenic
AAGGTTGTGTGTGGGTGAAG+CGG 0.660026 7.4:-26519002 None:intergenic
GACTGTGGACATGGATACAG+TGG 0.664275 7.4:+26519687 MS.gene058694:CDS
GCTTATTAGTGCATGGACTG+TGG 0.676134 7.4:+26519672 MS.gene058694:CDS
CAACAACATCCTCAAATCGG+AGG 0.684331 7.4:+26519133 MS.gene058694:CDS
ATGGACAAAAGGTTGTGTGT+GGG 0.716607 7.4:-26519010 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTAAGGTTTTTGTA+TGG + chr7.4:26519286-26519305 MS.gene058694:CDS 15.0%
!! ATAGTCATTATAGCATTTAT+AGG - chr7.4:26519359-26519378 None:intergenic 20.0%
!! TAAGTAACACAAAAATCATT+TGG - chr7.4:26519619-26519638 None:intergenic 20.0%
!! TATTATTGTCCTTGATTTAA+AGG + chr7.4:26519567-26519586 MS.gene058694:CDS 20.0%
!! TTAGTATTAATGACCATATA+AGG - chr7.4:26519466-26519485 None:intergenic 20.0%
!!! TTCTATACAATATGATTTGT+TGG + chr7.4:26519639-26519658 MS.gene058694:CDS 20.0%
! AAAGTGTAAAGTTGCAAAAT+TGG - chr7.4:26518975-26518994 None:intergenic 25.0%
! AAGTGTAAAGTTGCAAAATT+GGG - chr7.4:26518974-26518993 None:intergenic 25.0%
! AATGCTATAATGACTATGAT+CGG + chr7.4:26519362-26519381 MS.gene058694:CDS 25.0%
! CACAATTTGTAAAGTATACT+AGG - chr7.4:26519798-26519817 None:intergenic 25.0%
! CTAGTATACTTTACAAATTG+TGG + chr7.4:26519796-26519815 MS.gene058694:CDS 25.0%
! GACAATAATAACAACAATGT+TGG - chr7.4:26519557-26519576 None:intergenic 25.0%
! TTGGTGAAGTTTAATTACAA+AGG + chr7.4:26519850-26519869 MS.gene058694:CDS 25.0%
!! TGGTTTTCATTTACCTTATA+TGG + chr7.4:26519450-26519469 MS.gene058694:CDS 25.0%
!! TTCTCAATCGCAATATTTTA+AGG + chr7.4:26519275-26519294 MS.gene058694:CDS 25.0%
!!! ATGATTACTTGGTAGTTTTA+GGG + chr7.4:26519332-26519351 MS.gene058694:CDS 25.0%
AAATCAATGGATAAGGTTTC+AGG - chr7.4:26519052-26519071 None:intergenic 30.0%
AACAGATGGTTATGATGAAT+TGG + chr7.4:26519831-26519850 MS.gene058694:CDS 30.0%
AAGAGATGCATCAAAATCAA+TGG - chr7.4:26519065-26519084 None:intergenic 30.0%
AATCAATGGATAAGGTTTCA+GGG - chr7.4:26519051-26519070 None:intergenic 30.0%
ACAAATTGTGGTGATATAGT+TGG + chr7.4:26519808-26519827 MS.gene058694:CDS 30.0%
TAATAAGTGGAAACAAGTTG+AGG + chr7.4:26519426-26519445 MS.gene058694:CDS 30.0%
TGATAACAGAAATCCTATTG+AGG + chr7.4:26518882-26518901 MS.gene058694:CDS 30.0%
TGATCCATAAAATCAAGGAT+GGG - chr7.4:26519112-26519131 None:intergenic 30.0%
TGCATCAAAATCAATGGATA+AGG - chr7.4:26519059-26519078 None:intergenic 30.0%
! TTGTCGTTTCCTTTAAATCA+AGG - chr7.4:26519579-26519598 None:intergenic 30.0%
!! GATGATTACTTGGTAGTTTT+AGG + chr7.4:26519331-26519350 MS.gene058694:CDS 30.0%
!! GATTTTGATGCATCTCTTAA+CGG + chr7.4:26519067-26519086 MS.gene058694:CDS 30.0%
!!! TTTTTCAGGTAGATCCAAAA+TGG + chr7.4:26519906-26519925 MS.gene058694:CDS 30.0%
AAGTATACTAGGAAGAAGTC+CGG - chr7.4:26519787-26519806 None:intergenic 35.0%
AATATGCAGTGCATTCATCT+TGG + chr7.4:26519728-26519747 MS.gene058694:CDS 35.0%
AATCATGTCCTATGGACAAA+AGG - chr7.4:26519024-26519043 None:intergenic 35.0%
ACCAAGTAATCATCAGTTGA+AGG - chr7.4:26519325-26519344 None:intergenic 35.0%
ACCTTCAACTGATGATTACT+TGG + chr7.4:26519321-26519340 MS.gene058694:CDS 35.0%
AGCTTGATTCCAATAGTCAT+AGG - chr7.4:26519250-26519269 None:intergenic 35.0%
AGGATTTCTGTTATCACTTC+CGG - chr7.4:26518878-26518897 None:intergenic 35.0%
CTAGAGAATCTCTCATATCT+TGG + chr7.4:26519880-26519899 MS.gene058694:CDS 35.0%
GTGATCCATAAAATCAAGGA+TGG - chr7.4:26519113-26519132 None:intergenic 35.0%
TAACGTAGTACATACTTCAC+CGG - chr7.4:26518911-26518930 None:intergenic 35.0%
TCTCATTGAGAGCTAATAAG+TGG + chr7.4:26519413-26519432 MS.gene058694:CDS 35.0%
TGAAGTATGTACTACGTTAC+AGG + chr7.4:26518912-26518931 MS.gene058694:CDS 35.0%
! AAAGTTGGGTTGTTCTTGAA+TGG + chr7.4:26519499-26519518 MS.gene058694:CDS 35.0%
! AAGTTGGGTTGTTCTTGAAT+GGG + chr7.4:26519500-26519519 MS.gene058694:CDS 35.0%
! GCTATCTAGTTTGAGTAACT+TGG + chr7.4:26519384-26519403 MS.gene058694:CDS 35.0%
! TTTTTCTATACGTCCTGATC+CGG + chr7.4:26519765-26519784 MS.gene058694:CDS 35.0%
!! ATGATTTGTTGGTGCTTGAT+GGG + chr7.4:26519650-26519669 MS.gene058694:CDS 35.0%
!! GTTGGTGATCCATAAAATCA+AGG - chr7.4:26519117-26519136 None:intergenic 35.0%
!! TATGATTTGTTGGTGCTTGA+TGG + chr7.4:26519649-26519668 MS.gene058694:CDS 35.0%
!!! TCATATCTTGGCTGTTTTTC+AGG + chr7.4:26519892-26519911 MS.gene058694:CDS 35.0%
AACAACCCAACTTTGTTGGA+AGG - chr7.4:26519493-26519512 None:intergenic 40.0%
AATCGTCCTTCCAACAAAGT+TGG + chr7.4:26519484-26519503 MS.gene058694:CDS 40.0%
ACAGGTGTGTTTGCAAATCA+TGG + chr7.4:26518930-26518949 MS.gene058694:CDS 40.0%
ACATGGATACAGTGGAGATT+TGG + chr7.4:26519695-26519714 MS.gene058694:CDS 40.0%
AGAAATCCTATTGAGGTTGC+CGG + chr7.4:26518889-26518908 MS.gene058694:CDS 40.0%
AGGGAAACAATCATGTCCTA+TGG - chr7.4:26519032-26519051 None:intergenic 40.0%
AGGTATTTGTTTGTGGACTC+CGG - chr7.4:26519221-26519240 None:intergenic 40.0%
ATCGTCCTTCCAACAAAGTT+GGG + chr7.4:26519485-26519504 MS.gene058694:CDS 40.0%
ATGAGAGATTCTCTAGCAGA+TGG - chr7.4:26519876-26519895 None:intergenic 40.0%
ATGGACAAAAGGTTGTGTGT+GGG - chr7.4:26519013-26519032 None:intergenic 40.0%
CAAGAACAACCCAACTTTGT+TGG - chr7.4:26519497-26519516 None:intergenic 40.0%
CACCAACAACATCCTCAAAT+CGG + chr7.4:26519130-26519149 MS.gene058694:CDS 40.0%
CATGGATACAGTGGAGATTT+GGG + chr7.4:26519696-26519715 MS.gene058694:CDS 40.0%
CTGACAAAGGCTTCTATCTA+TGG + chr7.4:26519185-26519204 MS.gene058694:CDS 40.0%
CTTGAATGGGGCTATTCATT+GGG + chr7.4:26519513-26519532 MS.gene058694:CDS 40.0%
GAGTCCACAAACAAATACCT+AGG + chr7.4:26519221-26519240 MS.gene058694:CDS 40.0%
GGTGATATAGTTGGAACAGA+TGG + chr7.4:26519817-26519836 MS.gene058694:CDS 40.0%
GTGACCTAGGTATTTGTTTG+TGG - chr7.4:26519228-26519247 None:intergenic 40.0%
TATCTATGGAATCCATCCAC+CGG + chr7.4:26519199-26519218 MS.gene058694:CDS 40.0%
TATGGACAAAAGGTTGTGTG+TGG - chr7.4:26519014-26519033 None:intergenic 40.0%
TCCATAAAATCAAGGATGGG+TGG - chr7.4:26519109-26519128 None:intergenic 40.0%
TCTTGAATGGGGCTATTCAT+TGG + chr7.4:26519512-26519531 MS.gene058694:CDS 40.0%
! AAGTGGAAACAAGTTGAGGT+TGG + chr7.4:26519430-26519449 MS.gene058694:CDS 40.0%
! ACACACAACCTTTTGTCCAT+AGG + chr7.4:26519013-26519032 MS.gene058694:CDS 40.0%
! AGTTGGGTTGTTCTTGAATG+GGG + chr7.4:26519501-26519520 MS.gene058694:CDS 40.0%
! CTCTGTATACACGACCATTT+TGG - chr7.4:26519923-26519942 None:intergenic 40.0%
! TCCACCCATCCTTGATTTTA+TGG + chr7.4:26519105-26519124 MS.gene058694:CDS 40.0%
!! GTGTTTTTGCACTCTGACAA+AGG + chr7.4:26519172-26519191 MS.gene058694:CDS 40.0%
!! TTGATGGGCTTATTAGTGCA+TGG + chr7.4:26519665-26519684 MS.gene058694:CDS 40.0%
CAACAACATCCTCAAATCGG+AGG + chr7.4:26519133-26519152 MS.gene058694:CDS 45.0%
CCAATAGTCATAGGTGACCT+AGG - chr7.4:26519241-26519260 None:intergenic 45.0%
CCTAGGTCACCTATGACTAT+TGG + chr7.4:26519238-26519257 MS.gene058694:CDS 45.0%
TATTTGTTTGTGGACTCCGG+TGG - chr7.4:26519218-26519237 None:intergenic 45.0%
TCAAATCGGAGGTTCGTGTA+GGG + chr7.4:26519144-26519163 MS.gene058694:CDS 45.0%
! CTCCGATTTGAGGATGTTGT+TGG - chr7.4:26519135-26519154 None:intergenic 45.0%
! GCTTATTAGTGCATGGACTG+TGG + chr7.4:26519672-26519691 MS.gene058694:CDS 45.0%
AAATCGGAGGTTCGTGTAGG+GGG + chr7.4:26519146-26519165 MS.gene058694:CDS 50.0%
AAGGTTGTGTGTGGGTGAAG+CGG - chr7.4:26519005-26519024 None:intergenic 50.0%
ACTAGGAAGAAGTCCGGATC+AGG - chr7.4:26519781-26519800 None:intergenic 50.0%
ACTTCACCGGCAACCTCAAT+AGG - chr7.4:26518898-26518917 None:intergenic 50.0%
CAAATCGGAGGTTCGTGTAG+GGG + chr7.4:26519145-26519164 MS.gene058694:CDS 50.0%
CTCAAATCGGAGGTTCGTGT+AGG + chr7.4:26519143-26519162 MS.gene058694:CDS 50.0%
GAATGGGGCTATTCATTGGG+TGG + chr7.4:26519516-26519535 MS.gene058694:CDS 50.0%
GACTGTGGACATGGATACAG+TGG + chr7.4:26519687-26519706 MS.gene058694:CDS 50.0%
! AAGAAGCGTGCATCTGCTTC+CGG + chr7.4:26518856-26518875 MS.gene058694:CDS 50.0%
! CTACACGAACCTCCGATTTG+AGG - chr7.4:26519145-26519164 None:intergenic 50.0%
! TAGTGCATGGACTGTGGACA+TGG + chr7.4:26519678-26519697 MS.gene058694:CDS 50.0%
TGTTTGTGGACTCCGGTGGA+TGG - chr7.4:26519214-26519233 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 26518845 26519972 26518845 ID=MS.gene058694
chr7.4 mRNA 26518845 26519972 26518845 ID=MS.gene058694.t1;Parent=MS.gene058694
chr7.4 exon 26518845 26519972 26518845 ID=MS.gene058694.t1.exon1;Parent=MS.gene058694.t1
chr7.4 CDS 26518845 26519972 26518845 ID=cds.MS.gene058694.t1;Parent=MS.gene058694.t1
Gene Sequence

>MS.gene058694

ATGGCTGAGAGAAGAAGCGTGCATCTGCTTCCGGAAGTGATAACAGAAATCCTATTGAGGTTGCCGGTGAAGTATGTACTACGTTACAGGTGTGTTTGCAAATCATGGCTGTCTCTCATCTCTCATCCCAATTTTGCAACTTTACACTTTAATCTTGCCGCTTCACCCACACACAACCTTTTGTCCATAGGACATGATTGTTTCCCTGAAACCTTATCCATTGATTTTGATGCATCTCTTAACGGTGATTCTGCTTATGTTCCACCCATCCTTGATTTTATGGATCACCAACAACATCCTCAAATCGGAGGTTCGTGTAGGGGGTTTGTGTTTTTGCACTCTGACAAAGGCTTCTATCTATGGAATCCATCCACCGGAGTCCACAAACAAATACCTAGGTCACCTATGACTATTGGAATCAAGCTTAATATTCTCAATCGCAATATTTTAAGGTTTTTGTATGGCTTTGCATACGAACCTTCAACTGATGATTACTTGGTAGTTTTAGGGTCCTATAAATGCTATAATGACTATGATCGGCTATCTAGTTTGAGTAACTTGGAGATTTTCTCATTGAGAGCTAATAAGTGGAAACAAGTTGAGGTTGGTTTTCATTTACCTTATATGGTCATTAATACTAATCGTCCTTCCAACAAAGTTGGGTTGTTCTTGAATGGGGCTATTCATTGGGTGGTTCATAATCATGAGACCAACATTGTTGTTATTATTGTCCTTGATTTAAAGGAAACGACAATATCAGAGATAGCTCTGCCAAATGATTTTTGTGTTACTTATTCTATACAATATGATTTGTTGGTGCTTGATGGGCTTATTAGTGCATGGACTGTGGACATGGATACAGTGGAGATTTGGGTGATGCAAGAATATGCAGTGCATTCATCTTGGATTAAGACTCTTGTTTTTTCTATACGTCCTGATCCGGACTTCTTCCTAGTATACTTTACAAATTGTGGTGATATAGTTGGAACAGATGGTTATGATGAATTGGTGAAGTTTAATTACAAAGGCCATCTGCTAGAGAATCTCTCATATCTTGGCTGTTTTTCAGGTAGATCCAAAATGGTCGTGTATACAGAGTCTCTGCTTTCACTCCCTACTAGCGTTTGA

Protein sequence

>MS.gene058694.t1

MAERRSVHLLPEVITEILLRLPVKYVLRYRCVCKSWLSLISHPNFATLHFNLAASPTHNLLSIGHDCFPETLSIDFDASLNGDSAYVPPILDFMDHQQHPQIGGSCRGFVFLHSDKGFYLWNPSTGVHKQIPRSPMTIGIKLNILNRNILRFLYGFAYEPSTDDYLVVLGSYKCYNDYDRLSSLSNLEIFSLRANKWKQVEVGFHLPYMVINTNRPSNKVGLFLNGAIHWVVHNHETNIVVIIVLDLKETTISEIALPNDFCVTYSIQYDLLVLDGLISAWTVDMDTVEIWVMQEYAVHSSWIKTLVFSIRPDPDFFLVYFTNCGDIVGTDGYDELVKFNYKGHLLENLSYLGCFSGRSKMVVYTESLLSLPTSV