AlfalfaGEDB | MS.gene62398

M. sativa cultivar XinJiangDaYe / MS.gene62398

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62398.t1	AES91547.1	65.5	168	18	1	1	168	90	217	1.60E-53	219.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62398.t1	G7JE39	65.5	168	18	1	1	168	90	217	1.1e-53	219.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene62398	MS.gene58785	PPI
MS.gene62398	MS.gene59943	PPI
MS.gene62398	MS.gene044426	PPI
MS.gene62398	MS.gene034681	PPI
MS.gene62398	MS.gene033441	PPI
MS.gene81242	MS.gene62398	PPI
MS.gene27283	MS.gene62398	PPI
MS.gene62398	MS.gene57532	PPI
MS.gene62398	MS.gene033442	PPI
MS.gene51202	MS.gene62398	PPI
MS.gene62398	MS.gene060366	PPI
MS.gene87562	MS.gene62398	PPI
MS.gene62398	MS.gene44428	PPI
MS.gene62398	MS.gene058669	PPI
MS.gene62398	MS.gene066120	PPI
MS.gene62398	MS.gene035235	PPI
MS.gene26829	MS.gene62398	PPI
MS.gene064104	MS.gene62398	PPI
MS.gene62398	MS.gene57528	PPI
MS.gene62398	MS.gene024000	PPI
MS.gene62398	MS.gene012215	PPI
MS.gene62398	MS.gene033079	PPI
MS.gene62398	MS.gene034677	PPI
MS.gene62398	MS.gene055694	PPI
MS.gene62398	MS.gene059101	PPI
MS.gene62398	MS.gene033444	PPI
MS.gene62398	MS.gene58316	PPI
MS.gene58722	MS.gene62398	PPI
MS.gene62398	MS.gene033430	PPI
MS.gene064091	MS.gene62398	PPI
MS.gene62398	MS.gene87584	PPI
MS.gene62398	MS.gene58321	PPI
MS.gene045476	MS.gene62398	PPI
MS.gene62398	MS.gene87564	PPI
MS.gene62398	MS.gene58315	PPI
MS.gene43796	MS.gene62398	PPI
MS.gene62398	MS.gene90743	PPI
MS.gene62398	MS.gene50311	PPI
MS.gene62398	MS.gene85454	PPI
MS.gene58313	MS.gene62398	PPI
MS.gene62398	MS.gene064112	PPI
MS.gene62398	MS.gene036556	PPI
MS.gene62398	MS.gene57538	PPI
MS.gene066622	MS.gene62398	PPI
MS.gene62398	MS.gene060367	PPI
MS.gene62398	MS.gene058693	PPI
MS.gene62398	MS.gene27319	PPI
MS.gene62398	MS.gene64001	PPI
MS.gene62398	MS.gene006711	PPI
MS.gene62398	MS.gene041395	PPI
MS.gene62398	MS.gene57536	PPI
MS.gene62398	MS.gene51200	PPI
MS.gene62398	MS.gene066641	PPI
MS.gene87588	MS.gene62398	PPI
MS.gene62398	MS.gene44887	PPI
MS.gene62398	MS.gene24286	PPI
MS.gene62398	MS.gene064083	PPI
MS.gene62398	MS.gene066635	PPI
MS.gene62398	MS.gene58783	PPI
MS.gene62398	MS.gene024420	PPI
MS.gene62398	MS.gene57533	PPI
MS.gene62398	MS.gene40988	PPI
MS.gene62398	MS.gene39265	PPI
MS.gene62398	MS.gene24173	PPI
MS.gene62398	MS.gene036584	PPI
MS.gene62398	MS.gene036662	PPI
MS.gene031591	MS.gene62398	PPI
MS.gene62398	MS.gene060368	PPI
MS.gene62398	MS.gene88776	PPI
MS.gene62398	MS.gene044429	PPI
MS.gene62398	MS.gene42451	PPI
MS.gene62398	MS.gene50304	PPI
MS.gene62398	MS.gene68890	PPI
MS.gene62398	MS.gene035261	PPI
MS.gene62398	MS.gene070461	PPI
MS.gene016524	MS.gene62398	PPI
MS.gene62398	MS.gene69307	PPI
MS.gene87559	MS.gene62398	PPI
MS.gene62398	MS.gene036581	PPI
MS.gene62398	MS.gene019507	PPI
MS.gene62398	MS.gene033431	PPI
MS.gene62398	MS.gene058692	PPI
MS.gene62398	MS.gene034762	PPI
MS.gene62398	MS.gene50320	PPI
MS.gene62398	MS.gene58314	PPI
MS.gene62398	MS.gene87557	PPI
MS.gene063826	MS.gene62398	PPI
MS.gene62398	MS.gene67501	PPI
MS.gene62398	MS.gene96406	PPI
MS.gene62398	MS.gene27285	PPI
MS.gene62398	MS.gene035262	PPI
MS.gene44892	MS.gene62398	PPI
MS.gene62398	MS.gene77857	PPI
MS.gene62398	MS.gene028390	PPI
MS.gene62398	MS.gene40878	PPI
MS.gene066641	MS.gene62398	PPI
MS.gene62398	MS.gene96407	PPI
MS.gene62398	MS.gene058694	PPI
MS.gene62398	MS.gene069075	PPI
MS.gene000038	MS.gene62398	PPI
MS.gene064111	MS.gene62398	PPI
MS.gene62398	MS.gene058703	PPI
MS.gene62398	MS.gene50329	PPI
MS.gene62398	MS.gene047279	PPI
MS.gene62398	MS.gene060370	PPI
MS.gene025887	MS.gene62398	PPI
MS.gene62398	MS.gene024002	PPI
MS.gene75875	MS.gene62398	PPI
MS.gene62398	MS.gene032969	PPI
MS.gene041470	MS.gene62398	PPI
MS.gene62398	MS.gene041392	PPI
MS.gene62398	MS.gene50297	PPI
MS.gene62398	MS.gene42445	PPI
MS.gene62398	MS.gene86273	PPI
MS.gene62398	MS.gene26830	PPI
MS.gene006710	MS.gene62398	PPI
MS.gene62398	MS.gene40985	PPI
MS.gene62398	MS.gene22715	PPI
MS.gene62398	MS.gene038756	PPI
MS.gene62398	MS.gene51207	PPI
MS.gene011679	MS.gene62398	PPI
MS.gene62398	MS.gene36595	PPI
MS.gene62398	MS.gene57527	PPI
MS.gene62398	MS.gene024004	PPI
MS.gene62398	MS.gene045140	PPI
MS.gene62398	MS.gene070462	PPI
MS.gene62398	MS.gene061240	PPI
MS.gene62398	MS.gene041473	PPI
MS.gene77856	MS.gene62398	PPI
MS.gene62398	MS.gene88780	PPI
MS.gene62398	MS.gene064086	PPI
MS.gene62398	MS.gene035234	PPI
MS.gene62398	MS.gene058989	PPI
MS.gene62398	MS.gene041468	PPI
MS.gene44883	MS.gene62398	PPI
MS.gene62398	MS.gene015089	PPI
MS.gene62398	MS.gene066639	PPI
MS.gene62398	MS.gene42447	PPI
MS.gene62398	MS.gene51189	PPI
MS.gene62398	MS.gene43789	PPI
MS.gene62398	MS.gene64203	PPI
MS.gene41046	MS.gene62398	PPI
MS.gene017412	MS.gene62398	PPI
MS.gene57529	MS.gene62398	PPI
MS.gene62398	MS.gene046958	PPI
MS.gene80884	MS.gene62398	PPI
MS.gene62398	MS.gene40904	PPI
MS.gene62398	MS.gene044425	PPI
MS.gene62398	MS.gene032970	PPI
MS.gene62398	MS.gene57537	PPI
MS.gene009883	MS.gene62398	PPI
MS.gene033427	MS.gene62398	PPI
MS.gene62398	MS.gene59637	PPI
MS.gene041474	MS.gene62398	PPI
MS.gene62398	MS.gene033426	PPI
MS.gene27020	MS.gene62398	PPI
MS.gene62398	MS.gene27022	PPI
MS.gene066620	MS.gene62398	PPI
MS.gene035236	MS.gene62398	PPI
MS.gene62398	MS.gene97996	PPI
MS.gene62398	MS.gene87585	PPI
MS.gene62398	MS.gene041390	PPI
MS.gene62398	MS.gene023999	PPI
MS.gene62398	MS.gene024009	PPI
MS.gene62398	MS.gene036599	PPI
MS.gene51208	MS.gene62398	PPI
MS.gene62398	MS.gene40887	PPI
MS.gene62398	MS.gene87200	PPI
MS.gene62398	MS.gene42444	PPI
MS.gene62398	MS.gene035237	PPI
MS.gene35068	MS.gene62398	PPI
MS.gene90744	MS.gene62398	PPI
MS.gene51204	MS.gene62398	PPI
MS.gene62398	MS.gene000036	PPI
MS.gene036557	MS.gene62398	PPI
MS.gene50329	MS.gene62398	PPI
MS.gene62398	MS.gene50309	PPI
MS.gene62398	MS.gene51199	PPI
MS.gene62398	MS.gene035263	PPI
MS.gene62398	MS.gene96448	PPI
MS.gene62398	MS.gene036664	PPI
MS.gene62398	MS.gene053257	PPI
MS.gene059156	MS.gene62398	PPI
MS.gene84698	MS.gene62398	PPI
MS.gene62398	MS.gene77858	PPI
MS.gene62398	MS.gene51201	PPI
MS.gene62398	MS.gene009893	PPI
MS.gene62398	MS.gene045475	PPI
MS.gene62398	MS.gene50336	PPI
MS.gene62398	MS.gene57526	PPI
MS.gene82082	MS.gene62398	PPI
MS.gene96126	MS.gene62398	PPI
MS.gene62398	MS.gene77704	PPI
MS.gene57535	MS.gene62398	PPI
MS.gene62398	MS.gene50305	PPI
MS.gene62398	MS.gene033083	PPI
MS.gene62398	MS.gene63658	PPI
MS.gene62398	MS.gene60027	PPI
MS.gene62398	MS.gene033081	PPI
MS.gene033432	MS.gene62398	PPI
MS.gene62398	MS.gene036663	PPI
MS.gene62398	MS.gene68580	PPI
MS.gene62398	MS.gene072177	PPI
MS.gene62398	MS.gene92376	PPI
MS.gene44885	MS.gene62398	PPI
MS.gene62398	MS.gene57525	PPI
MS.gene62398	MS.gene63657	PPI
MS.gene62398	MS.gene059157	PPI
MS.gene62398	MS.gene023996	PPI
MS.gene62398	MS.gene030114	PPI
MS.gene62398	MS.gene58716	PPI
MS.gene62398	MS.gene045473	PPI
MS.gene62398	MS.gene50301	PPI
MS.gene62398	MS.gene88774	PPI
MS.gene010758	MS.gene62398	PPI
MS.gene62398	MS.gene54049	PPI
MS.gene62398	MS.gene031590	PPI
MS.gene87586	MS.gene62398	PPI
MS.gene62398	MS.gene40984	PPI
MS.gene50326	MS.gene62398	PPI
MS.gene62398	MS.gene066623	PPI
MS.gene62398	MS.gene064090	PPI
MS.gene62398	MS.gene24208	PPI
MS.gene62398	MS.gene58317	PPI
MS.gene62398	MS.gene90742	PPI
MS.gene62398	MS.gene24212	PPI
MS.gene62398	MS.gene51191	PPI
MS.gene62398	MS.gene50332	PPI
MS.gene62398	MS.gene024979	PPI
MS.gene62398	MS.gene041475	PPI
MS.gene42452	MS.gene62398	PPI
MS.gene063414	MS.gene62398	PPI
MS.gene62398	MS.gene24826	PPI
MS.gene62398	MS.gene063472	PPI
MS.gene62398	MS.gene43790	PPI
MS.gene62398	MS.gene034680	PPI
MS.gene62398	MS.gene31587	PPI
MS.gene62398	MS.gene27021	PPI
MS.gene62398	MS.gene51208	PPI
MS.gene62398	MS.gene044563	PPI
MS.gene40902	MS.gene62398	PPI
MS.gene62398	MS.gene50327	PPI
MS.gene62398	MS.gene066626	PPI
MS.gene62398	MS.gene40982	PPI
MS.gene62398	MS.gene50339	PPI
MS.gene62398	MS.gene063474	PPI
MS.gene26957	MS.gene62398	PPI
MS.gene036582	MS.gene62398	PPI
MS.gene62398	MS.gene88416	PPI
MS.gene62398	MS.gene57530	PPI
MS.gene58320	MS.gene62398	PPI
MS.gene62398	MS.gene003076	PPI
MS.gene58781	MS.gene62398	PPI
MS.gene011106	MS.gene62398	PPI
MS.gene62398	MS.gene009892	PPI
MS.gene62398	MS.gene67687	PPI
MS.gene62398	MS.gene26101	PPI
MS.gene60027	MS.gene62398	PPI
MS.gene44886	MS.gene62398	PPI
MS.gene62398	MS.gene006705	PPI
MS.gene62398	MS.gene061241	PPI
MS.gene62398	MS.gene51192	PPI
MS.gene041390	MS.gene62398	PPI
MS.gene62398	MS.gene51188	PPI
MS.gene62398	MS.gene033875	PPI
MS.gene000035	MS.gene62398	PPI
MS.gene62398	MS.gene041489	PPI
MS.gene87569	MS.gene62398	PPI
MS.gene62398	MS.gene38220	PPI
MS.gene62398	MS.gene40986	PPI
MS.gene87573	MS.gene62398	PPI
MS.gene041491	MS.gene62398	PPI
MS.gene62398	MS.gene36704	PPI
MS.gene62398	MS.gene041394	PPI
MS.gene62398	MS.gene034688	PPI
MS.gene62398	MS.gene58239	PPI
MS.gene62398	MS.gene03060	PPI
MS.gene019504	MS.gene62398	PPI
MS.gene62398	MS.gene24213	PPI
MS.gene62398	MS.gene033440	PPI
MS.gene62398	MS.gene31637	PPI
MS.gene62398	MS.gene024011	PPI
MS.gene62398	MS.gene58241	PPI
MS.gene059096	MS.gene62398	PPI
MS.gene62398	MS.gene064109	PPI
MS.gene62398	MS.gene058696	PPI
MS.gene62398	MS.gene63655	PPI
MS.gene62398	MS.gene035238	PPI
MS.gene62398	MS.gene39262	PPI
MS.gene62398	MS.gene85043	PPI
MS.gene62398	MS.gene064114	PPI
MS.gene019505	MS.gene62398	PPI
MS.gene62398	MS.gene87563	PPI
MS.gene62398	MS.gene062698	PPI
MS.gene034690	MS.gene62398	PPI
MS.gene62398	MS.gene80610	PPI
MS.gene26949	MS.gene62398	PPI
MS.gene036760	MS.gene62398	PPI
MS.gene62398	MS.gene053256	PPI
MS.gene58311	MS.gene62398	PPI
MS.gene62398	MS.gene40886	PPI
MS.gene62398	MS.gene041391	PPI
MS.gene62398	MS.gene033443	PPI
MS.gene59639	MS.gene62398	PPI
MS.gene50298	MS.gene62398	PPI
MS.gene62398	MS.gene036583	PPI
MS.gene62398	MS.gene50307	PPI
MS.gene62398	MS.gene021553	PPI
MS.gene62398	MS.gene045474	PPI
MS.gene62398	MS.gene058701	PPI
MS.gene62398	MS.gene036558	PPI
MS.gene62398	MS.gene87554	PPI
MS.gene62398	MS.gene009891	PPI
MS.gene62398	MS.gene27051	PPI
MS.gene019506	MS.gene62398	PPI
MS.gene62398	MS.gene064108	PPI
MS.gene058692	MS.gene62398	PPI
MS.gene62398	MS.gene048193	PPI
MS.gene62398	MS.gene58312	PPI
MS.gene62398	MS.gene016220	PPI
MS.gene62398	MS.gene024008	PPI
MS.gene62398	MS.gene50337	PPI
MS.gene69309	MS.gene62398	PPI
MS.gene62398	MS.gene063670	PPI
MS.gene62398	MS.gene54541	PPI
MS.gene62398	MS.gene50306	PPI
MS.gene62398	MS.gene041393	PPI
MS.gene62398	MS.gene053299	PPI
MS.gene62398	MS.gene28758	PPI
MS.gene034686	MS.gene62398	PPI
MS.gene070461	MS.gene62398	PPI
MS.gene62398	MS.gene57531	PPI
MS.gene62398	MS.gene58240	PPI
MS.gene62398	MS.gene27284	PPI
MS.gene62398	MS.gene041388	PPI
MS.gene62398	MS.gene019503	PPI
MS.gene62398	MS.gene57717	PPI
MS.gene62398	MS.gene48221	PPI
MS.gene051820	MS.gene62398	PPI
MS.gene62398	MS.gene51190	PPI
MS.gene62398	MS.gene58319	PPI
MS.gene62398	MS.gene71159	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62398.t1	MTR_4g114700	65.089	169	19	1	1	169	90	218	6.24e-69	209
MS.gene62398.t1	MTR_4g117720	55.080	187	72	4	2	178	194	378	3.59e-61	194
MS.gene62398.t1	MTR_3g103020	54.787	188	69	5	2	178	196	378	1.87e-59	189
MS.gene62398.t1	MTR_4g116330	53.514	185	75	4	2	178	199	380	4.14e-59	189
MS.gene62398.t1	MTR_4g116320	54.348	184	71	6	1	176	78	256	7.57e-57	179
MS.gene62398.t1	MTR_4g109270	55.090	167	64	3	20	178	201	364	3.73e-56	181
MS.gene62398.t1	MTR_6g060650	52.747	182	75	3	2	177	196	372	6.10e-56	180
MS.gene62398.t1	MTR_3g034180	51.872	187	75	4	2	177	306	488	6.05e-55	181
MS.gene62398.t1	MTR_4g109280	51.913	183	79	4	2	178	180	359	6.85e-55	177
MS.gene62398.t1	MTR_8g040935	50.000	180	77	4	11	178	30	208	2.55e-53	169
MS.gene62398.t1	MTR_4g117850	51.075	186	76	6	1	175	195	376	2.09e-51	169
MS.gene62398.t1	MTR_3g034130	50.898	167	72	3	4	164	200	362	2.98e-50	166
MS.gene62398.t1	MTR_1g055175	47.283	184	84	6	4	178	22	201	1.02e-48	157
MS.gene62398.t1	MTR_3g034160	49.721	179	79	3	5	177	201	374	3.43e-48	160
MS.gene62398.t1	MTR_1g055165	48.555	173	77	5	14	178	150	318	5.42e-46	153
MS.gene62398.t1	MTR_4g023130	49.180	183	75	6	2	175	137	310	1.02e-45	152
MS.gene62398.t1	MTR_4g023380	44.498	209	76	6	2	178	179	379	3.64e-45	152
MS.gene62398.t1	MTR_4g023080	48.634	183	76	6	2	175	178	351	6.94e-45	151
MS.gene62398.t1	MTR_4g023090	45.000	200	78	7	2	177	194	385	1.79e-44	151
MS.gene62398.t1	MTR_4g021785	47.312	186	83	5	1	178	177	355	2.02e-44	150
MS.gene62398.t1	MTR_4g118370	46.328	177	77	5	1	175	97	257	3.37e-44	147
MS.gene62398.t1	MTR_4g094365	48.677	189	77	8	2	178	184	364	5.13e-44	149
MS.gene62398.t1	MTR_5g097210	47.727	176	80	5	8	176	191	361	6.47e-44	149
MS.gene62398.t1	MTR_4g118380	48.765	162	66	3	2	148	198	357	2.07e-43	147
MS.gene62398.t1	MTR_8g433040	47.778	180	81	6	2	178	195	364	4.14e-43	147
MS.gene62398.t1	MTR_8g032380	47.778	180	81	6	2	178	195	364	4.14e-43	147
MS.gene62398.t1	MTR_8g433030	48.087	183	76	8	2	173	163	337	4.30e-42	144
MS.gene62398.t1	MTR_4g122850	45.902	183	85	8	5	178	187	364	4.36e-42	145
MS.gene62398.t1	MTR_8g032390	48.087	183	76	8	2	173	196	370	1.11e-41	143
MS.gene62398.t1	MTR_4g117870	45.506	178	62	5	2	178	124	267	1.79e-41	140
MS.gene62398.t1	MTR_1g055195	48.193	166	73	5	21	178	318	478	4.37e-41	144
MS.gene62398.t1	MTR_4g023070	45.918	196	75	8	2	175	181	367	1.08e-39	138
MS.gene62398.t1	MTR_4g117770	44.149	188	90	5	2	178	184	367	1.52e-39	138
MS.gene62398.t1	MTR_4g117810	44.149	188	90	5	2	178	184	367	1.52e-39	138
MS.gene62398.t1	MTR_5g070130	46.632	193	84	10	2	178	188	377	2.59e-39	137
MS.gene62398.t1	MTR_4g118360	53.488	129	55	3	52	178	1	126	3.83e-39	130
MS.gene62398.t1	MTR_1g055135	47.305	167	73	5	23	178	213	375	7.00e-39	136
MS.gene62398.t1	MTR_4g023200	45.699	186	81	7	2	175	180	357	2.30e-38	134
MS.gene62398.t1	MTR_4g117780	44.149	188	90	5	2	178	184	367	3.37e-38	134
MS.gene62398.t1	MTR_4g116330	44.693	179	61	4	2	178	199	341	8.39e-38	132
MS.gene62398.t1	MTR_4g023190	45.161	186	81	7	2	175	180	356	8.92e-38	133
MS.gene62398.t1	MTR_4g023150	44.624	186	83	7	2	175	180	357	1.05e-37	133
MS.gene62398.t1	MTR_6g463430	43.716	183	85	6	2	175	26	199	5.41e-37	127
MS.gene62398.t1	MTR_4g023120	44.103	195	80	7	2	175	181	367	5.44e-37	131
MS.gene62398.t1	MTR_5g070080	49.398	166	71	5	22	178	225	386	1.43e-36	130
MS.gene62398.t1	MTR_4g117750	47.305	167	70	4	21	174	194	355	1.86e-36	132
MS.gene62398.t1	MTR_4g117750	48.148	135	57	4	51	175	349	480	2.93e-32	120
MS.gene62398.t1	MTR_4g118400	42.697	178	79	6	1	172	134	294	2.06e-36	128
MS.gene62398.t1	MTR_4g023440	44.633	177	61	5	2	178	193	332	1.63e-35	126
MS.gene62398.t1	MTR_5g070088	47.742	155	69	4	28	173	229	380	3.20e-35	127
MS.gene62398.t1	MTR_1g055250	43.421	152	76	4	3	146	90	239	8.72e-34	122
MS.gene62398.t1	MTR_8g102520	43.860	171	84	4	16	178	156	322	1.47e-33	121
MS.gene62398.t1	MTR_7g079400	42.932	191	91	7	2	178	151	337	5.89e-33	120
MS.gene62398.t1	MTR_5g023000	61.856	97	32	2	83	178	7	99	9.45e-33	113
MS.gene62398.t1	MTR_4g117530	39.326	178	76	4	2	178	107	253	8.64e-32	115
MS.gene62398.t1	MTR_4g122860	40.884	181	76	7	4	178	165	320	1.05e-28	108
MS.gene62398.t1	MTR_7g079370	40.000	180	95	6	2	172	175	350	1.52e-28	108
MS.gene62398.t1	MTR_7g079420	40.323	186	90	8	7	178	966	1144	5.15e-27	107
MS.gene62398.t1	MTR_7g079450	44.286	140	72	3	39	178	4	137	1.59e-26	98.2
MS.gene62398.t1	MTR_8g098830	43.704	135	65	4	18	144	63	194	8.76e-25	96.3
MS.gene62398.t1	MTR_4g121580	35.928	167	76	6	5	168	201	339	1.37e-22	93.2
MS.gene62398.t1	MTR_7g117720	55.172	87	38	1	88	173	186	272	4.72e-20	84.7
MS.gene62398.t1	MTR_4g023430	48.148	81	42	0	98	178	142	222	1.49e-19	82.4
MS.gene62398.t1	MTR_4g122840	38.849	139	44	5	43	178	164	264	3.56e-17	77.0
MS.gene62398.t1	MTR_2g048580	31.771	192	99	8	2	178	168	342	7.39e-17	77.0
MS.gene62398.t1	MTR_8g013005	54.839	62	25	1	117	178	1	59	9.14e-16	68.2
MS.gene62398.t1	MTR_8g013010	46.512	86	34	3	2	81	235	314	3.92e-13	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 42 sgRNAs with CRISPR-Local

Find 47 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTCTGTATACAACGCAAAT+TGG	0.229651	8.2:+13955958	None:intergenic
AGAGTAGGGTTGGTCTTTAA+TGG	0.230123	8.2:-13956371	MS.gene62398:CDS
GGTACTTGATATCAGGAAAA+TGG	0.231212	8.2:+13956411	None:intergenic
TTAGAGAATACTTTAGTATA+TGG	0.244586	8.2:-13956226	MS.gene62398:CDS
ATTCTTATTCTTTCTCTTGA+TGG	0.256363	8.2:-13956134	MS.gene62398:CDS
TTCTAGAGCATGACTCATTA+TGG	0.262944	8.2:-13956007	MS.gene62398:CDS
CGATTATGGTCAAAATCATT+TGG	0.310127	8.2:+13956272	None:intergenic
TCTTTAATGGGTCTATTCAT+TGG	0.374417	8.2:-13956358	MS.gene62398:CDS
TAGAGAATACTTTAGTATAT+GGG	0.376537	8.2:-13956225	MS.gene62398:CDS
GAGTAGGGTTGGTCTTTAAT+GGG	0.380532	8.2:-13956370	MS.gene62398:CDS
GATGATCCATTACTTTCAAC+TGG	0.401175	8.2:-13955984	MS.gene62398:CDS
TTGGGACGGTACTTGATATC+AGG	0.417403	8.2:+13956404	None:intergenic
CTCTTGATGGCATCCCCTCT+CGG	0.431495	8.2:-13956121	MS.gene62398:CDS
TTAGGCTTGCATGTTGTCAC+CGG	0.436965	8.2:+13955920	None:intergenic
TTCTGTATACAACGCAAATT+GGG	0.440787	8.2:+13955959	None:intergenic
GGTATCATACACTTGAGATA+TGG	0.444256	8.2:-13956196	MS.gene62398:CDS
GTTGGAAGAGATGACAAAAC+TGG	0.445047	8.2:-13956059	MS.gene62398:CDS
TGGTCAAAATCATTTGGAAA+AGG	0.452962	8.2:+13956278	None:intergenic
TACTTTAGTATATGGGCTAT+GGG	0.453026	8.2:-13956218	MS.gene62398:CDS
TCTAGAGCATGACTCATTAT+GGG	0.456461	8.2:-13956006	MS.gene62398:CDS
AATACAAAGTACAATCATCT+TGG	0.466827	8.2:-13956163	MS.gene62398:CDS
ATACTTTAGTATATGGGCTA+TGG	0.472579	8.2:-13956219	MS.gene62398:CDS
GTACTTGATATCAGGAAAAT+GGG	0.474629	8.2:+13956412	None:intergenic
GAATCTTTGCTTTCACTCCC+CGG	0.486445	8.2:-13955939	MS.gene62398:CDS
CCCTACTCTAGGCTCAGGAT+TGG	0.512525	8.2:+13956385	None:intergenic
ACCAACCCTACTCTAGGCTC+AGG	0.522644	8.2:+13956380	None:intergenic
CCTACTCTAGGCTCAGGATT+GGG	0.526604	8.2:+13956386	None:intergenic
TAGGCTTGCATGTTGTCACC+GGG	0.528934	8.2:+13955921	None:intergenic
TGGGATCCAGTTGAAAGTAA+TGG	0.537735	8.2:+13955978	None:intergenic
TCCTGAGCCTAGAGTAGGGT+TGG	0.540414	8.2:-13956381	MS.gene62398:CDS
TTAAAGACCAACCCTACTCT+AGG	0.572534	8.2:+13956374	None:intergenic
CCAATCCTGAGCCTAGAGTA+GGG	0.576939	8.2:-13956385	MS.gene62398:CDS
ATTGGGATAAAGTGCCGAGA+GGG	0.579058	8.2:+13956107	None:intergenic
CCCAATCCTGAGCCTAGAGT+AGG	0.582388	8.2:-13956386	MS.gene62398:CDS
TAATATGTGGCATGTAATCG+AGG	0.602408	8.2:-13956438	None:intergenic
ATGCTGAAGTATAATTACAA+AGG	0.616769	8.2:-13956035	MS.gene62398:CDS
AATATGTGGCATGTAATCGA+GGG	0.644013	8.2:-13956437	MS.gene62398:CDS
CTCTAGGCTCAGGATTGGGA+CGG	0.645228	8.2:+13956390	None:intergenic
TTGGGATAAAGTGCCGAGAG+GGG	0.664166	8.2:+13956108	None:intergenic
ACTTTAGTATATGGGCTATG+GGG	0.671907	8.2:-13956217	MS.gene62398:CDS
AGGCTTGCATGTTGTCACCG+GGG	0.724966	8.2:+13955922	None:intergenic
TATTGGGATAAAGTGCCGAG+AGG	0.743389	8.2:+13956106	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAGAGAATACTTTAGTATAT+GGG	-	chr8.2:13956129-13956148	MS.gene62398:CDS	20.0%
!!	TTAGAGAATACTTTAGTATA+TGG	-	chr8.2:13956128-13956147	MS.gene62398:CDS	20.0%
!	AATACAAAGTACAATCATCT+TGG	-	chr8.2:13956191-13956210	MS.gene62398:CDS	25.0%
!	ATGCTGAAGTATAATTACAA+AGG	-	chr8.2:13956319-13956338	MS.gene62398:CDS	25.0%
!	ATTCTTATTCTTTCTCTTGA+TGG	-	chr8.2:13956220-13956239	MS.gene62398:CDS	25.0%
!!	AATCACATTTTTCACGATTA+TGG	+	chr8.2:13956099-13956118	None:intergenic	25.0%
!!!	CACTTTTTGTTGAACATATT+GGG	+	chr8.2:13956267-13956286	None:intergenic	25.0%
	ATCGTGAAAAATGTGATTTG+TGG	-	chr8.2:13956101-13956120	MS.gene62398:CDS	30.0%
	ATTCTGTATACAACGCAAAT+TGG	+	chr8.2:13956399-13956418	None:intergenic	30.0%
	CCAATATGTTCAACAAAAAG+TGG	-	chr8.2:13956265-13956284	MS.gene62398:CDS	30.0%
	CGATTATGGTCAAAATCATT+TGG	+	chr8.2:13956085-13956104	None:intergenic	30.0%
	GTACTTGATATCAGGAAAAT+GGG	+	chr8.2:13955945-13955964	None:intergenic	30.0%
	TGGTCAAAATCATTTGGAAA+AGG	+	chr8.2:13956079-13956098	None:intergenic	30.0%
	TTCTGTATACAACGCAAATT+GGG	+	chr8.2:13956398-13956417	None:intergenic	30.0%
!	ATACTTTAGTATATGGGCTA+TGG	-	chr8.2:13956135-13956154	MS.gene62398:CDS	30.0%
!	TACTTTAGTATATGGGCTAT+GGG	-	chr8.2:13956136-13956155	MS.gene62398:CDS	30.0%
!	TCGTGAAAAATGTGATTTGT+GGG	-	chr8.2:13956102-13956121	MS.gene62398:CDS	30.0%
!	TCTTTAATGGGTCTATTCAT+TGG	-	chr8.2:13955996-13956015	MS.gene62398:CDS	30.0%
!!!	CCACTTTTTGTTGAACATAT+TGG	+	chr8.2:13956268-13956287	None:intergenic	30.0%
	ACAAAAAGTGGTGACATTGT+TGG	-	chr8.2:13956277-13956296	MS.gene62398:CDS	35.0%
	GATGATCCATTACTTTCAAC+TGG	-	chr8.2:13956370-13956389	MS.gene62398:CDS	35.0%
	GGTACTTGATATCAGGAAAA+TGG	+	chr8.2:13955946-13955965	None:intergenic	35.0%
	GGTATCATACACTTGAGATA+TGG	-	chr8.2:13956158-13956177	MS.gene62398:CDS	35.0%
!	ACTTTAGTATATGGGCTATG+GGG	-	chr8.2:13956137-13956156	MS.gene62398:CDS	35.0%
!	TCTAGAGCATGACTCATTAT+GGG	-	chr8.2:13956348-13956367	MS.gene62398:CDS	35.0%
!!	TTCTAGAGCATGACTCATTA+TGG	-	chr8.2:13956347-13956366	MS.gene62398:CDS	35.0%
	GTTGGAAGAGATGACAAAAC+TGG	-	chr8.2:13956295-13956314	MS.gene62398:CDS	40.0%
	TGGGATCCAGTTGAAAGTAA+TGG	+	chr8.2:13956379-13956398	None:intergenic	40.0%
	TTAAAGACCAACCCTACTCT+AGG	+	chr8.2:13955983-13956002	None:intergenic	40.0%
!!	AGAGTAGGGTTGGTCTTTAA+TGG	-	chr8.2:13955983-13956002	MS.gene62398:CDS	40.0%
!!	GAGTAGGGTTGGTCTTTAAT+GGG	-	chr8.2:13955984-13956003	MS.gene62398:CDS	40.0%
	GAATCTTTGCTTTCACTCCC+CGG	-	chr8.2:13956415-13956434	MS.gene62398:CDS	45.0%
	TTAGGCTTGCATGTTGTCAC+CGG	+	chr8.2:13956437-13956456	None:intergenic	45.0%
	TTGGGACGGTACTTGATATC+AGG	+	chr8.2:13955953-13955972	None:intergenic	45.0%
!!	ATTGGGATAAAGTGCCGAGA+GGG	+	chr8.2:13956250-13956269	None:intergenic	45.0%
!!	TATTGGGATAAAGTGCCGAG+AGG	+	chr8.2:13956251-13956270	None:intergenic	45.0%
	CCAATCCTGAGCCTAGAGTA+GGG	-	chr8.2:13955969-13955988	MS.gene62398:CDS	50.0%
	CCTACTCTAGGCTCAGGATT+GGG	+	chr8.2:13955971-13955990	None:intergenic	50.0%
	TAGGCTTGCATGTTGTCACC+GGG	+	chr8.2:13956436-13956455	None:intergenic	50.0%
!!	TTGGGATAAAGTGCCGAGAG+GGG	+	chr8.2:13956249-13956268	None:intergenic	50.0%
	ACCAACCCTACTCTAGGCTC+AGG	+	chr8.2:13955977-13955996	None:intergenic	55.0%
	AGGCTTGCATGTTGTCACCG+GGG	+	chr8.2:13956435-13956454	None:intergenic	55.0%
	CCCAATCCTGAGCCTAGAGT+AGG	-	chr8.2:13955968-13955987	MS.gene62398:CDS	55.0%
	CCCTACTCTAGGCTCAGGAT+TGG	+	chr8.2:13955972-13955991	None:intergenic	55.0%
	CTCTAGGCTCAGGATTGGGA+CGG	+	chr8.2:13955967-13955986	None:intergenic	55.0%
	TCCTGAGCCTAGAGTAGGGT+TGG	-	chr8.2:13955973-13955992	MS.gene62398:CDS	55.0%
!	CTCTTGATGGCATCCCCTCT+CGG	-	chr8.2:13956233-13956252	MS.gene62398:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.2	gene	13955920	13956456	13955920	ID=MS.gene62398
chr8.2	mRNA	13955920	13956456	13955920	ID=MS.gene62398.t1;Parent=MS.gene62398
chr8.2	exon	13955920	13956456	13955920	ID=MS.gene62398.t1.exon1;Parent=MS.gene62398.t1
chr8.2	CDS	13955920	13956456	13955920	ID=cds.MS.gene62398.t1;Parent=MS.gene62398.t1

Gene Sequence

>MS.gene62398

ATGTGGCATGTAATCGAGGGTACCCATTTTCCTGATATCAAGTACCGTCCCAATCCTGAGCCTAGAGTAGGGTTGGTCTTTAATGGGTCTATTCATTGGTCATCGATGTATGATATTCTTGCATTTGATTTAATTGAAAGAAAACTTTTAGTGATGCCTTTTCCAAATGATTTTGACCATAATCGTGAAAAATGTGATTTGTGGGTATTTAGAGAATACTTTAGTATATGGGCTATGGGGTATCATACACTTGAGATATGGATGATGAAAGAATACAAAGTACAATCATCTTGGACTAAGATTCTTATTCTTTCTCTTGATGGCATCCCCTCTCGGCACTTTATCCCAATATGTTCAACAAAAAGTGGTGACATTGTTGGAAGAGATGACAAAACTGGAATGCTGAAGTATAATTACAAAGGAGAGCTTCTAGAGCATGACTCATTATGGGATGATCCATTACTTTCAACTGGATCCCAATTTGCGTTGTATACAGAATCTTTGCTTTCACTCCCCGGTGACAACATGCAAGCCTAA

Protein sequence

>MS.gene62398.t1

MWHVIEGTHFPDIKYRPNPEPRVGLVFNGSIHWSSMYDILAFDLIERKLLVMPFPNDFDHNREKCDLWVFREYFSIWAMGYHTLEIWMMKEYKVQSSWTKILILSLDGIPSRHFIPICSTKSGDIVGRDDKTGMLKYNYKGELLEHDSLWDDPLLSTGSQFALYTESLLSLPGDNMQA