AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033431


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033431.t1 MTR_7g079370 93.491 338 22 0 38 375 16 353 0.0 652
MS.gene033431.t1 MTR_5g069120 88.764 178 20 0 19 196 1 178 2.32e-112 325
MS.gene033431.t1 MTR_2g048580 47.120 382 149 12 3 375 2 339 1.09e-98 296
MS.gene033431.t1 MTR_7g079400 52.681 317 122 9 70 372 29 331 2.83e-94 285
MS.gene033431.t1 MTR_8g102520 48.656 372 130 9 4 372 3 316 4.85e-94 284
MS.gene033431.t1 MTR_3g103020 44.474 380 184 11 1 372 12 372 2.46e-86 266
MS.gene033431.t1 MTR_6g060650 46.335 382 177 11 3 372 2 367 3.87e-84 260
MS.gene033431.t1 MTR_3g034180 42.857 385 191 10 1 372 115 483 6.81e-83 261
MS.gene033431.t1 MTR_4g023080 42.400 375 181 11 3 371 2 347 5.16e-82 254
MS.gene033431.t1 MTR_3g034160 43.750 384 189 9 1 372 1 369 1.83e-81 254
MS.gene033431.t1 MTR_3g034130 42.700 363 183 7 1 351 1 350 1.24e-79 249
MS.gene033431.t1 MTR_4g116330 43.041 388 174 14 3 372 16 374 2.09e-79 248
MS.gene033431.t1 MTR_5g070080 42.317 397 183 14 2 372 3 379 4.26e-79 248
MS.gene033431.t1 MTR_4g109280 44.882 381 172 15 3 373 2 354 1.40e-78 246
MS.gene033431.t1 MTR_5g070130 43.081 383 188 12 3 372 5 370 4.02e-78 245
MS.gene033431.t1 MTR_5g070088 41.772 395 171 11 12 372 10 379 2.96e-77 243
MS.gene033431.t1 MTR_4g021785 40.426 376 191 10 1 371 1 348 7.11e-77 241
MS.gene033431.t1 MTR_4g023090 39.332 389 198 9 3 372 9 378 4.51e-76 240
MS.gene033431.t1 MTR_4g117850 42.667 375 181 12 8 371 22 373 1.45e-75 238
MS.gene033431.t1 MTR_4g094365 42.520 381 184 15 3 372 2 358 1.75e-75 238
MS.gene033431.t1 MTR_1g055135 42.246 374 197 8 8 375 12 372 5.12e-75 237
MS.gene033431.t1 MTR_4g023070 41.995 381 183 11 9 371 3 363 6.81e-75 237
MS.gene033431.t1 MTR_4g109270 43.386 378 185 12 3 372 2 358 9.40e-74 233
MS.gene033431.t1 MTR_8g433040 42.175 377 179 15 4 372 13 358 1.09e-73 233
MS.gene033431.t1 MTR_8g032380 42.175 377 179 15 4 372 13 358 1.09e-73 233
MS.gene033431.t1 MTR_4g122850 44.353 363 178 16 20 373 12 359 1.15e-73 234
MS.gene033431.t1 MTR_4g117720 41.361 382 159 12 3 373 45 372 1.19e-73 234
MS.gene033431.t1 MTR_5g097210 41.645 377 195 11 1 372 1 357 6.15e-73 232
MS.gene033431.t1 MTR_4g117750 42.857 364 175 11 22 375 16 356 7.71e-73 235
MS.gene033431.t1 MTR_4g117750 45.652 138 53 8 251 372 346 477 2.46e-15 77.8
MS.gene033431.t1 MTR_4g023130 39.037 374 154 11 3 371 2 306 8.49e-73 229
MS.gene033431.t1 MTR_4g023120 41.534 378 183 11 12 371 6 363 2.47e-72 230
MS.gene033431.t1 MTR_8g032390 42.480 379 171 15 1 372 31 369 9.15e-71 226
MS.gene033431.t1 MTR_4g118380 43.305 351 163 10 22 350 21 357 4.00e-70 224
MS.gene033431.t1 MTR_7g079420 50.903 277 89 7 106 375 905 1141 6.83e-70 238
MS.gene033431.t1 MTR_4g023190 44.503 382 168 17 3 372 4 353 2.43e-69 222
MS.gene033431.t1 MTR_4g116330 40.464 388 145 14 3 372 16 335 5.41e-69 220
MS.gene033431.t1 MTR_4g117770 41.099 382 191 12 3 372 2 361 5.76e-69 221
MS.gene033431.t1 MTR_4g117810 41.099 382 191 12 3 372 2 361 5.76e-69 221
MS.gene033431.t1 MTR_4g023150 43.194 382 176 15 2 372 3 354 2.65e-68 219
MS.gene033431.t1 MTR_4g117780 40.314 382 194 15 3 372 2 361 1.07e-66 215
MS.gene033431.t1 MTR_4g023380 38.522 379 167 10 23 372 30 371 5.41e-66 214
MS.gene033431.t1 MTR_4g023200 42.659 361 166 16 23 372 24 354 1.84e-65 212
MS.gene033431.t1 MTR_4g023440 40.437 366 153 12 12 372 21 326 1.08e-63 206
MS.gene033431.t1 MTR_8g013010 43.728 279 137 9 3 279 48 308 1.51e-59 195
MS.gene033431.t1 MTR_4g121580 40.053 377 167 15 6 368 8 339 1.81e-59 197
MS.gene033431.t1 MTR_8g098830 48.691 191 91 3 186 375 34 218 4.41e-53 176
MS.gene033431.t1 MTR_1g055195 41.281 281 126 8 102 372 221 472 1.71e-50 176
MS.gene033431.t1 MTR_4g118400 38.284 303 138 9 75 372 36 294 1.04e-49 169
MS.gene033431.t1 MTR_4g117870 39.228 311 131 10 70 375 7 264 4.37e-49 166
MS.gene033431.t1 MTR_4g118370 43.750 256 108 8 119 372 33 254 7.54e-48 163
MS.gene033431.t1 MTR_4g116340 41.810 232 104 8 8 236 35 238 4.72e-44 153
MS.gene033431.t1 MTR_8g433030 46.188 223 104 9 155 372 125 336 9.80e-42 149
MS.gene033431.t1 MTR_8g433030 47.674 86 40 3 1 84 31 113 5.27e-14 72.8
MS.gene033431.t1 MTR_7g079450 60.606 132 49 2 241 372 3 131 2.16e-40 139
MS.gene033431.t1 MTR_4g116320 44.186 215 110 6 162 373 46 253 1.34e-38 139
MS.gene033431.t1 MTR_6g463430 46.354 192 92 7 184 372 13 196 2.74e-37 134
MS.gene033431.t1 MTR_1g055175 41.538 195 111 3 181 373 3 196 5.29e-36 130
MS.gene033431.t1 MTR_4g114700 37.079 267 107 9 107 369 9 218 8.90e-34 125
MS.gene033431.t1 MTR_1g055250 39.904 208 115 6 149 354 46 245 6.61e-32 123
MS.gene033431.t1 MTR_7g117720 37.727 220 103 7 1 215 1 191 1.43e-31 120
MS.gene033431.t1 MTR_7g117720 48.864 88 40 3 292 374 186 273 2.52e-13 70.1
MS.gene033431.t1 MTR_4g117530 35.857 251 109 7 124 372 47 247 1.35e-30 117
MS.gene033431.t1 MTR_3g007410 31.111 315 180 14 12 314 55 344 1.50e-30 120
MS.gene033431.t1 MTR_3g007360 30.794 315 181 14 12 314 55 344 3.70e-30 119
MS.gene033431.t1 MTR_8g040935 40.513 195 105 7 185 372 12 202 5.41e-30 114
MS.gene033431.t1 MTR_2g021150 29.595 321 187 12 12 317 17 313 2.24e-29 117
MS.gene033431.t1 MTR_3g007330 30.255 314 177 13 12 314 51 333 6.26e-29 116
MS.gene033431.t1 MTR_3g013740 30.383 339 179 14 4 314 39 348 8.37e-29 116
MS.gene033431.t1 MTR_1g055165 43.421 152 83 3 224 373 163 313 1.34e-28 114
MS.gene033431.t1 MTR_1g055165 43.165 139 74 4 1 135 1 138 9.53e-24 100
MS.gene033431.t1 MTR_3g007430 28.981 314 183 10 12 312 46 332 1.50e-27 112
MS.gene033431.t1 MTR_3g009310 30.218 321 180 14 4 309 36 327 1.80e-27 112
MS.gene033431.t1 MTR_4g107820 31.353 303 176 13 12 307 39 316 2.05e-27 112
MS.gene033431.t1 MTR_4g107780 31.353 303 176 13 12 307 39 316 2.05e-27 112
MS.gene033431.t1 MTR_4g107820 32.013 303 174 14 12 307 39 316 2.48e-27 112
MS.gene033431.t1 MTR_4g107780 31.353 303 176 13 12 307 39 316 3.50e-27 111
MS.gene033431.t1 MTR_4g133170 28.763 299 187 9 12 304 7 285 6.64e-27 110
MS.gene033431.t1 MTR_4g055060 28.267 329 197 14 2 314 22 327 8.60e-27 110
MS.gene033431.t1 MTR_2g029990 28.378 370 233 13 12 370 54 402 8.71e-27 110
MS.gene033431.t1 MTR_6g065980 28.904 301 169 12 12 304 19 282 1.29e-26 109
MS.gene033431.t1 MTR_4g108820 29.878 328 150 15 12 324 45 307 2.49e-26 107
MS.gene033431.t1 MTR_1g068835 27.687 307 198 10 9 309 4 292 4.30e-26 108
MS.gene033431.t1 MTR_3g014570 28.986 345 179 16 6 320 19 327 9.88e-26 107
MS.gene033431.t1 MTR_3g014540 29.874 318 180 12 12 314 32 321 1.33e-25 106
MS.gene033431.t1 MTR_8g467140 31.090 312 163 14 12 304 35 313 2.97e-25 105
MS.gene033431.t1 MTR_6g021880 28.382 377 218 16 20 370 31 381 3.46e-25 105
MS.gene033431.t1 MTR_4g117430 40.559 143 62 5 119 261 15 134 3.88e-25 100
MS.gene033431.t1 MTR_7g407070 28.485 330 192 14 12 316 35 345 1.21e-24 104
MS.gene033431.t1 MTR_4g118360 45.833 120 63 2 255 372 1 120 1.58e-24 97.4
MS.gene033431.t1 MTR_5g022420 29.245 318 179 14 1 306 15 298 2.53e-24 103
MS.gene033431.t1 MTR_1g097560 28.198 383 215 17 6 370 33 373 2.84e-24 102
MS.gene033431.t1 MTR_3g013770 28.698 338 182 12 4 314 24 329 3.20e-24 103
MS.gene033431.t1 MTR_2g021155 27.855 359 221 13 12 356 39 373 4.52e-24 104
MS.gene033431.t1 MTR_5g011200 26.885 305 188 13 12 304 20 301 5.01e-24 102
MS.gene033431.t1 MTR_3g009240 29.195 298 182 10 12 304 39 312 6.03e-24 102
MS.gene033431.t1 MTR_7g070440 29.063 320 186 13 12 311 10 308 1.60e-23 100
MS.gene033431.t1 MTR_4g061340 28.882 322 177 14 12 312 29 319 1.61e-23 100
MS.gene033431.t1 MTR_3g011100 30.321 343 178 18 1 314 221 531 2.41e-23 102
MS.gene033431.t1 MTR_3g036290 27.044 318 183 12 9 315 21 300 2.65e-23 100
MS.gene033431.t1 MTR_7g070830 26.277 411 239 14 12 371 24 421 2.83e-23 100
MS.gene033431.t1 MTR_3g006670 30.719 306 174 12 12 304 52 332 4.27e-23 100
MS.gene033431.t1 MTR_2g055970 28.533 368 204 17 3 345 205 538 4.75e-23 100
MS.gene033431.t1 MTR_1g097330 29.739 306 177 14 12 307 19 296 5.32e-23 99.8
MS.gene033431.t1 MTR_5g007610 27.385 325 215 11 5 320 36 348 6.12e-23 99.8
MS.gene033431.t1 MTR_1g094210 28.093 388 216 17 5 370 52 398 8.19e-23 99.4
MS.gene033431.t1 MTR_1g094210 28.535 389 213 18 5 367 52 401 9.59e-23 99.0
MS.gene033431.t1 MTR_1g054725 25.879 398 219 18 8 370 19 375 1.03e-22 98.6
MS.gene033431.t1 MTR_1g068875 27.362 307 198 10 9 309 4 291 1.17e-22 98.6
MS.gene033431.t1 MTR_2g021190 29.316 307 177 12 12 304 24 304 1.41e-22 98.2
MS.gene033431.t1 MTR_0115s0020 25.806 403 252 15 8 375 9 399 1.61e-22 98.2
MS.gene033431.t1 MTR_3g083640 27.869 305 176 14 12 304 58 330 1.93e-22 98.2
MS.gene033431.t1 MTR_2g426090 26.752 314 199 11 9 304 6 306 1.96e-22 98.2
MS.gene033431.t1 MTR_7g070880 26.341 410 240 14 12 371 24 421 1.99e-22 98.2
MS.gene033431.t1 MTR_4g031770 27.036 307 182 12 12 304 7 285 2.08e-22 97.4
MS.gene033431.t1 MTR_1g097490 29.938 324 195 13 2 320 42 338 3.26e-22 97.4
MS.gene033431.t1 MTR_5g057790 27.273 319 191 15 12 317 49 339 5.98e-22 96.7
MS.gene033431.t1 MTR_7g017040 28.293 410 215 25 10 371 16 394 6.14e-22 96.7
MS.gene033431.t1 MTR_3g036430 28.328 293 164 12 12 304 23 269 1.01e-21 95.1
MS.gene033431.t1 MTR_2g024110 26.198 313 189 11 12 308 7 293 1.27e-21 95.5
MS.gene033431.t1 MTR_7g091630 25.758 330 207 8 5 309 28 344 1.36e-21 95.9
MS.gene033431.t1 MTR_2g043410 28.698 338 180 10 9 311 22 333 1.39e-21 95.9
MS.gene033431.t1 MTR_1g055070 28.832 274 167 13 3 259 42 304 1.45e-21 95.5
MS.gene033431.t1 MTR_3g007270 28.529 333 188 16 6 314 43 349 1.48e-21 95.5
MS.gene033431.t1 MTR_0128s0020 29.042 334 189 14 1 309 10 320 2.03e-21 95.1
MS.gene033431.t1 MTR_1g054575 29.677 310 167 13 9 302 51 325 2.11e-21 96.3
MS.gene033431.t1 MTR_0464s0020 28.329 353 174 14 9 311 23 346 2.39e-21 95.1
MS.gene033431.t1 MTR_5g057690 26.124 356 216 17 12 360 49 364 3.98e-21 94.0
MS.gene033431.t1 MTR_0267s0050 26.562 384 210 13 9 347 6 362 4.30e-21 94.0
MS.gene033431.t1 MTR_3g010870 25.962 312 179 11 9 304 36 311 6.26e-21 93.6
MS.gene033431.t1 MTR_1g050542 28.065 310 184 14 9 309 57 336 6.69e-21 93.6
MS.gene033431.t1 MTR_7g013590 28.618 304 184 14 12 304 39 320 7.04e-21 93.6
MS.gene033431.t1 MTR_1g056710 27.036 307 181 14 12 304 37 314 7.64e-21 93.2
MS.gene033431.t1 MTR_6g055210 29.970 337 192 12 2 310 14 334 7.64e-21 94.0
MS.gene033431.t1 MTR_5g057710 26.593 361 221 16 12 361 49 376 8.19e-21 93.2
MS.gene033431.t1 MTR_0064s0160 25.510 392 251 16 8 371 41 419 8.25e-21 94.0
MS.gene033431.t1 MTR_6g017280 26.521 411 237 20 1 370 1 387 1.48e-20 92.4
MS.gene033431.t1 MTR_3g006500 25.926 324 184 12 1 304 9 296 1.83e-20 92.0
MS.gene033431.t1 MTR_2g078900 25.658 304 185 10 12 304 36 309 2.29e-20 91.7
MS.gene033431.t1 MTR_3g024110 26.171 363 209 12 12 364 104 417 2.48e-20 92.4
MS.gene033431.t1 MTR_3g072470 28.116 345 177 12 9 311 19 334 2.66e-20 92.0
MS.gene033431.t1 MTR_0044s0300 26.814 317 190 13 2 304 27 315 3.02e-20 91.7
MS.gene033431.t1 MTR_0129s0070 26.368 402 247 17 1 371 9 392 3.09e-20 91.7
MS.gene033431.t1 MTR_4g109290 36.145 166 61 6 8 168 8 133 3.15e-20 87.8
MS.gene033431.t1 MTR_2g046920 26.302 384 234 13 5 370 20 372 3.52e-20 91.3
MS.gene033431.t1 MTR_3g010970 26.250 320 179 12 12 316 51 328 4.77e-20 91.3
MS.gene033431.t1 MTR_2g426070 26.708 322 188 14 11 304 8 309 6.32e-20 90.9
MS.gene033431.t1 MTR_1g068860 27.070 314 197 11 7 309 2 294 6.62e-20 90.5
MS.gene033431.t1 MTR_2g028110 27.019 322 189 12 9 309 4 300 7.76e-20 90.5
MS.gene033431.t1 MTR_2g426020 27.481 393 232 17 8 369 5 375 8.94e-20 90.5
MS.gene033431.t1 MTR_4g117550 27.114 402 219 17 2 371 10 369 9.52e-20 90.1
MS.gene033431.t1 MTR_7g057270 26.453 344 181 13 9 309 25 339 1.01e-19 90.5
MS.gene033431.t1 MTR_3g010390 27.795 331 184 15 12 313 36 340 1.05e-19 90.1
MS.gene033431.t1 MTR_1g055375 25.478 314 199 15 7 306 2 294 1.09e-19 89.7
MS.gene033431.t1 MTR_2g043400 28.994 338 179 12 9 311 23 334 1.11e-19 90.1
MS.gene033431.t1 MTR_7g056003 26.866 335 189 10 9 311 15 325 1.30e-19 90.1
MS.gene033431.t1 MTR_3g009260 27.070 314 183 13 12 313 44 323 1.56e-19 89.7
MS.gene033431.t1 MTR_5g037680 26.044 407 233 18 4 370 3 381 1.96e-19 89.7
MS.gene033431.t1 MTR_1g088120 26.471 340 182 9 12 309 13 326 2.34e-19 89.4
MS.gene033431.t1 MTR_3g006570 27.244 312 193 14 3 304 14 301 2.46e-19 89.0
MS.gene033431.t1 MTR_4g030830 26.866 335 191 13 1 304 1 312 3.11e-19 88.6
MS.gene033431.t1 MTR_6g004660 26.289 388 240 12 8 370 14 380 3.12e-19 88.6
MS.gene033431.t1 MTR_6g007135 26.166 386 239 14 9 370 26 389 3.20e-19 88.6
MS.gene033431.t1 MTR_3g030330 26.578 301 182 11 12 304 23 292 3.36e-19 88.6
MS.gene033431.t1 MTR_8g099460 28.395 324 191 16 6 309 2 304 3.56e-19 88.6
MS.gene033431.t1 MTR_3g010590 25.902 305 174 11 12 304 42 306 4.04e-19 88.2
MS.gene033431.t1 MTR_0667s0010 24.776 335 188 13 1 304 1 302 4.43e-19 88.6
MS.gene033431.t1 MTR_3g013950 26.042 384 214 14 9 347 6 364 4.66e-19 88.2
MS.gene033431.t1 MTR_2g046900 27.013 385 238 16 5 370 24 384 5.11e-19 88.2
MS.gene033431.t1 MTR_7g060940 26.822 343 185 12 3 311 16 326 5.70e-19 87.8
MS.gene033431.t1 MTR_2g028140 27.907 344 175 18 6 304 2 317 6.91e-19 87.8
MS.gene033431.t1 MTR_2g028130 26.667 330 201 15 6 309 2 316 7.88e-19 87.8
MS.gene033431.t1 MTR_3g083010 26.392 413 238 18 9 375 6 398 9.27e-19 87.4
MS.gene033431.t1 MTR_5g056020 27.654 358 200 16 12 325 20 362 9.78e-19 87.8
MS.gene033431.t1 MTR_5g046300 25.559 313 173 14 12 304 7 279 1.01e-18 86.7
MS.gene033431.t1 MTR_5g046290 25.559 313 173 14 12 304 7 279 1.01e-18 86.7
MS.gene033431.t1 MTR_2g021800 25.120 418 243 16 6 371 13 412 1.13e-18 87.4
MS.gene033431.t1 MTR_3g024040 27.244 312 177 11 15 314 37 310 1.18e-18 87.0
MS.gene033431.t1 MTR_2g006360 28.205 312 160 12 2 309 39 290 1.20e-18 86.7
MS.gene033431.t1 MTR_7g007300 28.165 316 157 15 12 304 106 374 1.45e-18 87.0
MS.gene033431.t1 MTR_0054s0090 24.433 397 239 16 17 371 25 402 1.50e-18 87.0
MS.gene033431.t1 MTR_6g027910 24.138 377 254 10 12 370 12 374 1.57e-18 86.7
MS.gene033431.t1 MTR_7g016930 28.615 325 191 16 3 310 10 310 1.78e-18 85.9
MS.gene033431.t1 MTR_5g057020 26.814 317 188 15 12 323 49 326 1.82e-18 85.9
MS.gene033431.t1 MTR_7g066030 25.659 417 232 14 4 371 16 403 1.93e-18 86.7
MS.gene033431.t1 MTR_2g028160 27.485 342 187 17 6 309 2 320 2.32e-18 86.3
MS.gene033431.t1 MTR_2g031720 26.250 320 189 13 6 304 2 295 2.40e-18 86.3
MS.gene033431.t1 MTR_7g055870 26.891 357 197 13 1 309 5 345 2.49e-18 86.3
MS.gene033431.t1 MTR_2g104340 24.691 405 239 15 8 371 13 392 2.55e-18 86.3
MS.gene033431.t1 MTR_6g034720 44.262 122 58 4 130 251 53 164 3.00e-18 82.8
MS.gene033431.t1 MTR_6g086825 26.716 408 236 19 6 369 66 454 3.01e-18 86.3
MS.gene033431.t1 MTR_5g023000 53.933 89 38 2 286 372 6 93 3.07e-18 79.7
MS.gene033431.t1 MTR_4g070550 28.743 334 179 18 6 304 2 311 3.81e-18 85.5
MS.gene033431.t1 MTR_7g066100 25.385 390 254 10 12 372 14 395 3.86e-18 85.5
MS.gene033431.t1 MTR_8g062660 25.938 320 196 12 1 302 13 309 4.44e-18 86.3
MS.gene033431.t1 MTR_7g069550 25.416 421 226 19 1 367 5 391 4.51e-18 85.5
MS.gene033431.t1 MTR_7g055930 26.611 357 198 13 1 309 5 345 4.82e-18 85.5
MS.gene033431.t1 MTR_3g011120 26.807 332 199 12 3 312 8 317 5.96e-18 84.7
MS.gene033431.t1 MTR_3g010520 26.452 310 177 13 4 304 19 286 6.31e-18 84.7
MS.gene033431.t1 MTR_1g112930 25.069 363 212 17 13 364 29 342 6.97e-18 84.7
MS.gene033431.t1 MTR_7g067680 26.959 319 162 14 12 312 52 317 7.08e-18 84.7
MS.gene033431.t1 MTR_0129s0120 26.055 403 253 15 2 375 10 396 9.01e-18 84.3
MS.gene033431.t1 MTR_3g011060 27.134 328 166 14 12 304 31 320 1.39e-17 84.0
MS.gene033431.t1 MTR_8g101580 26.247 381 230 17 10 370 45 394 1.70e-17 83.6
MS.gene033431.t1 MTR_2g021252 25.413 303 180 12 12 304 50 316 1.75e-17 83.6
MS.gene033431.t1 MTR_3g023930 26.606 327 154 16 4 304 28 294 1.79e-17 83.2
MS.gene033431.t1 MTR_2g021050 26.791 321 172 14 6 304 2 281 1.87e-17 83.6
MS.gene033431.t1 MTR_0054s0100 24.181 397 238 16 17 369 25 402 1.97e-17 83.6
MS.gene033431.t1 MTR_3g058480 26.792 265 154 7 12 259 42 283 1.99e-17 82.8
MS.gene033431.t1 MTR_2g426060 28.488 344 169 19 9 309 6 315 2.03e-17 83.6
MS.gene033431.t1 MTR_2g461450 25.402 311 198 8 7 311 16 298 2.31e-17 82.8
MS.gene033431.t1 MTR_3g464500 26.667 330 193 10 6 309 23 329 2.35e-17 83.2
MS.gene033431.t1 MTR_3g036335 25.246 305 190 10 12 304 44 322 2.44e-17 83.2
MS.gene033431.t1 MTR_5g097680 25.412 425 253 15 1 371 9 423 3.07e-17 83.2
MS.gene033431.t1 MTR_3g030240 23.934 305 177 11 12 304 43 304 3.32e-17 82.8
MS.gene033431.t1 MTR_5g069390 25.728 412 240 17 4 369 20 411 3.37e-17 83.2
MS.gene033431.t1 MTR_8g073550 29.268 205 110 7 12 202 33 216 3.54e-17 80.5
MS.gene033431.t1 MTR_4g122860 34.021 194 81 10 191 372 156 314 4.70e-17 81.6
MS.gene033431.t1 MTR_0129s0050 25.366 410 254 16 2 371 7 404 4.95e-17 82.4
MS.gene033431.t1 MTR_0760s0010 25.439 342 204 12 14 342 52 355 5.45e-17 82.0
MS.gene033431.t1 MTR_7g056503 28.076 317 196 12 12 309 24 327 5.48e-17 82.0
MS.gene033431.t1 MTR_7g055987 26.506 332 177 11 9 311 20 313 5.77e-17 81.6
MS.gene033431.t1 MTR_7g078860 27.193 342 187 16 5 309 4 320 6.86e-17 81.6
MS.gene033431.t1 MTR_7g056820 25.714 385 210 17 6 347 3 354 6.99e-17 81.6
MS.gene033431.t1 MTR_2g046830 30.094 319 181 17 5 310 21 310 7.08e-17 82.0
MS.gene033431.t1 MTR_3g030250 24.252 301 186 9 12 304 40 306 7.68e-17 81.6
MS.gene033431.t1 MTR_7g066000 25.538 325 196 10 12 309 28 333 7.81e-17 81.6
MS.gene033431.t1 MTR_1g115160 26.603 312 181 13 7 306 20 295 8.22e-17 81.3
MS.gene033431.t1 MTR_2g025420 24.938 405 243 18 9 370 6 392 8.82e-17 81.6
MS.gene033431.t1 MTR_2g047832 28.182 330 193 15 5 310 25 334 8.93e-17 81.6
MS.gene033431.t1 MTR_0128s0070 28.135 327 188 14 7 309 20 323 9.44e-17 81.3
MS.gene033431.t1 MTR_0097s0030 26.946 334 190 13 6 313 11 316 9.63e-17 81.3
MS.gene033431.t1 MTR_2g047240 26.946 334 190 13 6 313 11 316 9.63e-17 81.3
MS.gene033431.t1 MTR_6g016285 24.641 418 239 16 9 370 20 417 1.08e-16 81.6
MS.gene033431.t1 MTR_5g069930 24.545 330 199 13 7 311 4 308 1.11e-16 81.3
MS.gene033431.t1 MTR_2g425980 26.683 401 224 21 9 369 5 375 1.13e-16 81.3
MS.gene033431.t1 MTR_4g014370 22.275 422 258 15 1 371 3 405 1.30e-16 81.3
MS.gene033431.t1 MTR_5g043160 28.319 339 185 15 12 306 53 377 1.42e-16 81.3
MS.gene033431.t1 MTR_4g024890 25.455 330 205 12 1 309 1 310 1.42e-16 80.9
MS.gene033431.t1 MTR_7g066850 26.769 325 191 13 9 309 22 323 1.71e-16 80.9
MS.gene033431.t1 MTR_4g030980 25.543 368 186 15 6 309 11 354 1.82e-16 80.9
MS.gene033431.t1 MTR_3g464470 26.606 327 194 11 6 309 3 306 1.84e-16 80.5
MS.gene033431.t1 MTR_3g010920 24.740 384 221 17 7 370 46 381 2.02e-16 80.5
MS.gene033431.t1 MTR_3g024150 25.796 314 173 15 12 304 38 312 2.13e-16 80.5
MS.gene033431.t1 MTR_7g445890 25.926 324 173 14 9 304 15 299 2.14e-16 80.1
MS.gene033431.t1 MTR_2g021770 24.113 423 246 15 1 371 4 403 2.17e-16 80.5
MS.gene033431.t1 MTR_4g028510 25.359 418 239 20 2 371 6 398 2.84e-16 80.5
MS.gene033431.t1 MTR_5g097330 24.818 411 248 13 2 371 9 399 2.95e-16 80.1
MS.gene033431.t1 MTR_4g129190 25.294 340 195 12 5 311 2 315 3.49e-16 79.7
MS.gene033431.t1 MTR_4g013180 26.879 346 194 16 6 316 7 328 4.75e-16 79.7
MS.gene033431.t1 MTR_4g013175 26.685 356 173 13 12 309 13 338 5.76e-16 79.3
MS.gene033431.t1 MTR_1g055055 25.080 311 177 14 12 310 29 295 6.17e-16 78.6
MS.gene033431.t1 MTR_7g052150 25.872 344 182 14 4 311 16 322 7.45e-16 79.0
MS.gene033431.t1 MTR_7g028660 25.959 339 176 14 9 307 10 313 7.46e-16 78.6
MS.gene033431.t1 MTR_5g096630 25.217 345 205 13 1 307 10 339 7.61e-16 79.0
MS.gene033431.t1 MTR_2g025960 28.054 221 125 10 104 304 5 211 8.91e-16 77.8
MS.gene033431.t1 MTR_3g011650 28.384 229 128 10 12 232 82 282 9.33e-16 77.4
MS.gene033431.t1 MTR_3g010430 25.234 321 190 13 3 304 29 318 1.03e-15 78.6
MS.gene033431.t1 MTR_7g091640 25.369 339 191 12 6 309 32 343 1.20e-15 77.8
MS.gene033431.t1 MTR_3g030350 27.243 301 185 15 12 304 38 312 1.22e-15 78.2
MS.gene033431.t1 MTR_4g080200 24.100 361 223 13 7 350 1 327 1.28e-15 77.8
MS.gene033431.t1 MTR_7g066010 25.667 300 166 11 4 268 16 293 1.29e-15 77.8
MS.gene033431.t1 MTR_7g056797 27.576 330 196 14 6 309 20 332 1.34e-15 78.2
MS.gene033431.t1 MTR_2g047892 26.036 338 179 14 9 308 21 325 1.55e-15 77.8
MS.gene033431.t1 MTR_3g010620 25.321 312 171 12 9 304 36 301 1.57e-15 77.8
MS.gene033431.t1 MTR_5g046260 23.390 295 172 13 12 304 7 249 1.70e-15 76.6
MS.gene033431.t1 MTR_7g077970 24.119 369 223 11 9 342 7 353 1.75e-15 77.8
MS.gene033431.t1 MTR_1g442850 27.829 327 175 12 9 304 5 301 2.19e-15 77.0
MS.gene033431.t1 MTR_5g097220 25.592 422 241 19 1 371 5 404 2.26e-15 77.4
MS.gene033431.t1 MTR_4g102410 23.383 402 248 14 3 360 55 440 3.15e-15 77.0
MS.gene033431.t1 MTR_2g022000 23.487 413 247 14 6 367 13 407 4.02e-15 76.6
MS.gene033431.t1 MTR_4g055820 23.513 353 203 11 1 307 6 337 4.06e-15 76.3
MS.gene033431.t1 MTR_5g027330 23.975 317 202 13 13 307 44 343 4.08e-15 76.6
MS.gene033431.t1 MTR_2g038680 24.818 411 241 17 10 371 16 407 4.82e-15 76.3
MS.gene033431.t1 MTR_5g068040 27.778 324 170 13 12 309 19 304 5.64e-15 75.9
MS.gene033431.t1 MTR_5g027370 23.659 317 203 12 13 307 33 332 5.89e-15 76.3
MS.gene033431.t1 MTR_4g019990 24.925 333 191 11 12 309 9 317 6.57e-15 75.9
MS.gene033431.t1 MTR_0649s0020 25.260 384 214 14 9 347 10 365 7.17e-15 75.9
MS.gene033431.t1 MTR_7g056760 25.672 335 196 14 7 309 21 334 9.17e-15 75.5
MS.gene033431.t1 MTR_7g060960 26.126 333 154 15 9 311 31 301 1.29e-14 74.7
MS.gene033431.t1 MTR_3g009300 26.282 312 165 13 12 313 37 293 1.32e-14 74.7
MS.gene033431.t1 MTR_1g061330 24.611 386 235 16 9 371 4 356 1.73e-14 74.7
MS.gene033431.t1 MTR_4g129160 24.405 336 198 10 13 309 12 330 1.86e-14 74.3
MS.gene033431.t1 MTR_3g009250 27.511 229 129 9 12 232 44 243 1.89e-14 72.8
MS.gene033431.t1 MTR_7g056260 24.925 333 188 10 9 309 14 316 1.91e-14 73.9
MS.gene033431.t1 MTR_3g023940 24.093 386 227 15 12 370 37 383 1.96e-14 74.3
MS.gene033431.t1 MTR_4g013185 25.915 355 177 15 12 309 13 338 2.77e-14 74.3
MS.gene033431.t1 MTR_7g061060 25.740 338 189 12 6 311 10 317 2.89e-14 73.9
MS.gene033431.t1 MTR_4g030110 24.928 349 191 12 1 320 21 327 3.64e-14 73.6
MS.gene033431.t1 MTR_5g069760 25.460 326 196 13 7 311 4 303 3.71e-14 73.6
MS.gene033431.t1 MTR_7g062060 24.760 416 242 15 5 371 7 400 4.07e-14 73.6
MS.gene033431.t1 MTR_2g046800 26.801 347 182 15 4 307 9 326 4.30e-14 73.6
MS.gene033431.t1 MTR_8g464770 25.622 402 235 18 4 372 7 377 4.61e-14 73.2
MS.gene033431.t1 MTR_1g114700 26.266 316 180 13 12 306 32 315 4.96e-14 73.2
MS.gene033431.t1 MTR_8g063370 23.377 385 262 14 1 367 15 384 5.05e-14 73.2
MS.gene033431.t1 MTR_4g037465 24.274 379 229 14 9 351 20 376 5.36e-14 73.2
MS.gene033431.t1 MTR_8g046310 25.258 388 240 14 8 372 15 375 6.05e-14 72.8
MS.gene033431.t1 MTR_7g055977 25.000 408 232 16 7 371 5 381 6.11e-14 72.8
MS.gene033431.t1 MTR_2g031680 23.948 309 190 12 12 304 9 288 6.50e-14 72.8
MS.gene033431.t1 MTR_5g057643 28.194 227 128 11 12 227 49 251 7.30e-14 71.6
MS.gene033431.t1 MTR_7g079640 25.843 356 179 18 1 316 5 315 7.48e-14 72.8
MS.gene033431.t1 MTR_5g010660 26.316 304 182 13 13 304 38 311 9.87e-14 72.8
MS.gene033431.t1 MTR_3g030310 25.478 314 182 13 12 304 24 306 9.90e-14 72.4
MS.gene033431.t1 MTR_4g011660 26.316 361 176 14 6 309 16 343 1.11e-13 72.4
MS.gene033431.t1 MTR_6g079810 24.041 391 252 18 17 371 78 459 1.14e-13 72.4
MS.gene033431.t1 MTR_3g006530 24.437 311 188 11 12 304 43 324 1.36e-13 72.0
MS.gene033431.t1 MTR_1g037540 24.412 340 192 12 15 308 11 331 1.65e-13 71.6
MS.gene033431.t1 MTR_7g062100 26.316 323 188 14 12 309 27 324 2.26e-13 71.2
MS.gene033431.t1 MTR_6g461660 25.284 352 205 14 3 316 13 344 2.31e-13 71.2
MS.gene033431.t1 MTR_0242s0060 25.073 343 199 12 1 306 1 322 2.40e-13 71.2
MS.gene033431.t1 MTR_0242s0040 25.073 343 199 12 1 306 1 322 2.40e-13 71.2
MS.gene033431.t1 MTR_7g078040 26.389 360 196 14 1 311 1 340 2.60e-13 71.2
MS.gene033431.t1 MTR_7g061050 24.620 329 197 9 6 309 10 312 2.66e-13 70.9
MS.gene033431.t1 MTR_2g021210 24.759 311 192 12 4 304 78 356 3.48e-13 70.9
MS.gene033431.t1 MTR_6g053240 23.750 320 183 11 12 304 31 316 3.68e-13 70.5
MS.gene033431.t1 MTR_3g058440 26.772 254 148 9 12 249 38 269 4.02e-13 69.7
MS.gene033431.t1 MTR_2g047200 25.970 335 187 17 9 309 19 326 4.93e-13 70.1
MS.gene033431.t1 MTR_7g050480 25.617 324 186 11 6 304 19 312 5.26e-13 70.1
MS.gene033431.t1 MTR_4g030760 23.939 330 207 12 2 320 66 362 6.12e-13 70.1
MS.gene033431.t1 MTR_7g077070 24.294 354 210 14 6 317 13 350 6.27e-13 70.1
MS.gene033431.t1 MTR_1g071010 22.802 364 228 12 12 343 18 360 6.71e-13 69.7
MS.gene033431.t1 MTR_2g010920 25.220 341 209 11 7 309 18 350 1.15e-12 69.3
MS.gene033431.t1 MTR_6g013270 25.078 319 188 14 9 306 28 316 1.17e-12 68.9
MS.gene033431.t1 MTR_5g064700 25.000 284 174 11 115 371 93 364 1.21e-12 68.9
MS.gene033431.t1 MTR_7g050520 25.309 324 187 11 6 304 19 312 1.25e-12 68.9
MS.gene033431.t1 MTR_7g078840 25.967 362 174 14 12 309 13 344 1.62e-12 68.9
MS.gene033431.t1 MTR_3g010870 25.316 237 128 9 9 230 36 238 1.69e-12 68.2
MS.gene033431.t1 MTR_2g031700 25.110 227 137 8 12 232 9 208 1.73e-12 67.8
MS.gene033431.t1 MTR_2g026010 27.219 338 182 17 7 314 2 305 1.97e-12 68.6
MS.gene033431.t1 MTR_6g053260 24.516 310 188 10 12 304 340 620 2.40e-12 68.9
MS.gene033431.t1 MTR_8g063440 23.846 390 260 14 3 371 6 379 2.56e-12 68.2
MS.gene033431.t1 MTR_5g096910 21.303 399 258 11 6 371 14 389 3.25e-12 67.8
MS.gene033431.t1 MTR_1g053510 25.472 424 229 20 5 372 11 403 3.36e-12 67.8
MS.gene033431.t1 MTR_1g055200 44.681 94 38 4 104 196 6 86 3.39e-12 62.8
MS.gene033431.t1 MTR_4g023430 45.679 81 40 3 3 81 35 113 3.44e-12 65.9
MS.gene033431.t1 MTR_4g028660 23.558 416 246 18 2 371 6 395 3.87e-12 67.4
MS.gene033431.t1 MTR_4g027450 23.558 416 246 18 2 371 6 395 3.87e-12 67.4
MS.gene033431.t1 MTR_4g030090 26.250 320 188 13 12 304 17 315 5.20e-12 67.0
MS.gene033431.t1 MTR_4g006270 23.856 306 174 11 12 302 7 268 6.45e-12 67.0
MS.gene033431.t1 MTR_7g022600 25.217 345 200 13 6 309 20 347 7.10e-12 66.6
MS.gene033431.t1 MTR_5g076490 26.471 272 169 8 124 371 68 332 7.48e-12 66.2
MS.gene033431.t1 MTR_7g078900 26.471 340 188 13 12 309 15 334 8.45e-12 66.6
MS.gene033431.t1 MTR_3g058470 23.548 310 170 7 12 304 40 299 1.19e-11 65.9
MS.gene033431.t1 MTR_5g072060 24.810 395 236 16 8 374 5 366 1.22e-11 66.6
MS.gene033431.t1 MTR_6g048140 24.138 319 179 10 12 304 42 323 1.24e-11 65.9
MS.gene033431.t1 MTR_8g012090 24.471 331 177 12 6 307 13 299 1.25e-11 65.5
MS.gene033431.t1 MTR_6g048120 24.919 309 195 10 12 304 39 326 1.36e-11 65.9
MS.gene033431.t1 MTR_1g029650 23.342 377 233 14 9 351 8 362 1.39e-11 65.9
MS.gene033431.t1 MTR_4g008790 25.210 357 170 13 12 309 42 360 1.49e-11 65.9
MS.gene033431.t1 MTR_7g056737 28.235 340 180 13 3 309 9 317 1.55e-11 65.9
MS.gene033431.t1 MTR_1g115185 23.810 315 188 9 12 306 42 324 1.83e-11 65.5
MS.gene033431.t1 MTR_2g021950 23.741 417 241 16 2 371 7 393 1.84e-11 65.5
MS.gene033431.t1 MTR_2g047878 26.478 389 214 20 9 370 20 363 1.89e-11 65.1
MS.gene033431.t1 MTR_5g057040 26.619 278 169 11 12 278 49 302 2.35e-11 65.9
MS.gene033431.t1 MTR_5g008530 56.364 55 21 1 6 60 15 66 2.85e-11 59.3
MS.gene033431.t1 MTR_5g096710 23.077 325 200 10 6 304 20 320 3.81e-11 64.3
MS.gene033431.t1 MTR_5g023570 36.893 103 61 2 12 114 40 138 3.83e-11 61.2
MS.gene033431.t1 MTR_6g092560 22.956 318 202 9 12 304 15 314 5.03e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033431.t1 AT3G06240 27.316 421 224 19 2 370 29 419 1.63e-24 104
MS.gene033431.t1 AT4G12560 25.260 384 240 13 12 369 7 369 5.98e-20 90.9
MS.gene033431.t1 AT4G12560 25.260 384 240 13 12 369 7 369 5.98e-20 90.9
MS.gene033431.t1 AT4G12560 25.260 384 240 13 12 369 7 369 5.98e-20 90.9
MS.gene033431.t1 AT3G23880 27.410 332 174 12 3 306 7 299 1.29e-19 89.7
MS.gene033431.t1 AT4G22390 25.658 304 200 11 12 304 7 295 1.95e-18 86.7
MS.gene033431.t1 AT4G22390 25.658 304 200 11 12 304 7 295 2.07e-18 86.3
MS.gene033431.t1 AT1G33530 26.183 317 167 17 10 305 97 367 8.41e-15 75.9
MS.gene033431.t1 AT5G49610 28.053 303 173 16 12 300 12 283 4.87e-14 73.2
MS.gene033431.t1 AT1G12870 25.168 298 190 14 12 294 36 315 1.84e-13 71.6

Find 85 sgRNAs with CRISPR-Local

Find 98 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATTGTCCTTGATTTAA+AGG 0.115001 7.2:+26126341 MS.gene033431:CDS
AAATCAATGGATAAGGTTTC+AGG 0.212005 7.2:-26125823 None:intergenic
CTCTGTATACACGACCATTT+TGG 0.240682 7.2:-26126694 None:intergenic
ATAGTCATTATAGCATTTAT+AGG 0.282447 7.2:-26126130 None:intergenic
AAAGTGTGAAGTTGCAAAAT+TGG 0.287135 7.2:-26125746 None:intergenic
CTGACAAAGGCTTCTATCTA+TGG 0.300497 7.2:+26125959 MS.gene033431:CDS
TTCTATACAATATGATTTGT+TGG 0.329655 7.2:+26126413 MS.gene033431:CDS
TCTCATTGAGAGCTAATAAC+TGG 0.335376 7.2:+26126187 MS.gene033431:CDS
AGGATTTCTGTTATCACTTC+CGG 0.338610 7.2:-26125649 None:intergenic
CAAGAACAACCCAACTTTGT+TGG 0.347764 7.2:-26126268 None:intergenic
ACATGGATACAGTGGAGATT+TGG 0.352479 7.2:+26126469 MS.gene033431:CDS
CTTGAATGGGGCTATTCATT+GGG 0.357670 7.2:+26126287 MS.gene033431:CDS
CCTAGGTCACCTATGACTAT+TGG 0.359555 7.2:+26126012 MS.gene033431:CDS
TCTTGAATGGGGCTATTCAT+TGG 0.366732 7.2:+26126286 MS.gene033431:CDS
ACAAATTGTGGTGATATAGT+TGG 0.377094 7.2:+26126582 MS.gene033431:CDS
AAAGTTGGGTTGTTCTTGAA+TGG 0.378544 7.2:+26126273 MS.gene033431:CDS
AAGAAGCGTGCATCTGCTTC+CGG 0.386581 7.2:+26125630 MS.gene033431:CDS
ACTTCACCGGCAACCTCAAT+AGG 0.386853 7.2:-26125669 None:intergenic
CAATCCAATCAAACGCTAGT+AGG 0.397210 7.2:-26126732 None:intergenic
TTAGTATTAATGACCATATA+AGG 0.398204 7.2:-26126237 None:intergenic
TATGATTTGTTGGTGCTTGA+TGG 0.399308 7.2:+26126423 MS.gene033431:CDS
TGAAGTATGTACTACGTTAC+AGG 0.406160 7.2:+26125686 MS.gene033431:CDS
TTGTCGTTTCCTTTAAATCA+AGG 0.413492 7.2:-26126350 None:intergenic
AACAGATGGTTATGATGAAT+TGG 0.415086 7.2:+26126605 MS.gene033431:CDS
AAGTTGGGTTGTTCTTGAAT+GGG 0.426332 7.2:+26126274 MS.gene033431:CDS
CATGGATACAGTGGAGATTT+GGG 0.428250 7.2:+26126470 MS.gene033431:CDS
CTAGAGAATCTCTCATATCT+TGG 0.429625 7.2:+26126654 MS.gene033431:CDS
AGCTTGATTCCAATAGTCAT+AGG 0.434478 7.2:-26126021 None:intergenic
GTGACCTAGGTATTTGTTTG+TGG 0.437568 7.2:-26125999 None:intergenic
ACCTTCAACTGATGATTACT+TGG 0.439135 7.2:+26126095 MS.gene033431:CDS
AGAAATCCTATTGAGGTTGC+CGG 0.439306 7.2:+26125663 MS.gene033431:CDS
AATATGCAGTGCATTCATCT+TGG 0.443353 7.2:+26126502 MS.gene033431:CDS
AATCGTCCTTCCAACAAAGT+TGG 0.444065 7.2:+26126258 MS.gene033431:CDS
ATCGTCCTTCCAACAAAGTT+GGG 0.448542 7.2:+26126259 MS.gene033431:CDS
CTACACGAACCTCCGATTTG+AGG 0.448833 7.2:-26125916 None:intergenic
CACAATTTGTAAAGTATACT+AGG 0.449978 7.2:-26126569 None:intergenic
TGCATCAAAATCAATGGATA+AGG 0.452169 7.2:-26125830 None:intergenic
GCTATCTAGTTTGAGTAACT+TGG 0.455895 7.2:+26126158 MS.gene033431:CDS
CTCCGATTTGAGGATGTTGT+TGG 0.463805 7.2:-26125906 None:intergenic
ATGATTTGTTGGTGCTTGAT+GGG 0.469175 7.2:+26126424 MS.gene033431:CDS
ACAGGTGTGTTTGCAAATCA+TGG 0.470956 7.2:+26125704 MS.gene033431:CDS
CAAAAGGTTGTGTGTGGGTG+AGG 0.472240 7.2:-26125779 None:intergenic
AAGTGTGAAGTTGCAAAATT+GGG 0.473825 7.2:-26125745 None:intergenic
AATCAATGGATAAGGTTTCA+GGG 0.476772 7.2:-26125822 None:intergenic
CTAGTATACTTTACAAATTG+TGG 0.480538 7.2:+26126570 MS.gene033431:CDS
CACCAACAACATCCTCAAAT+CGG 0.482160 7.2:+26125904 MS.gene033431:CDS
ACTAGGAAGAAGTCCGGATC+AGG 0.485708 7.2:-26126552 None:intergenic
AAGAGATGCATCAAAATCAA+TGG 0.496420 7.2:-26125836 None:intergenic
GACAATAATAACAACAATGT+TGG 0.505308 7.2:-26126328 None:intergenic
AGGTATTTGTTTGTGGACTC+CGG 0.506163 7.2:-26125992 None:intergenic
GTGATCCATAAAATCAAGGA+TGG 0.510701 7.2:-26125884 None:intergenic
GAATGGGGCTATTCATTGGG+TGG 0.513164 7.2:+26126290 MS.gene033431:CDS
AACTGGAAACAAGTTGAGGT+TGG 0.514529 7.2:+26126204 MS.gene033431:CDS
TCAAATCGGAGGTTCGTGTA+GGG 0.517509 7.2:+26125918 MS.gene033431:CDS
TTGGTGAAGTTTAATTACAA+AGG 0.525559 7.2:+26126624 MS.gene033431:CDS
AAGTATACTAGGAAGAAGTC+CGG 0.536637 7.2:-26126558 None:intergenic
AACAACCCAACTTTGTTGGA+AGG 0.537379 7.2:-26126264 None:intergenic
ATGAGAGATTCTCTAGCAGC+TGG 0.543433 7.2:-26126647 None:intergenic
AATGCTATAATGACTATGAT+CGG 0.553176 7.2:+26126136 MS.gene033431:CDS
ACCAAGTAATCATCAGTTGA+AGG 0.553454 7.2:-26126096 None:intergenic
AATCCAATCAAACGCTAGTA+GGG 0.554460 7.2:-26126731 None:intergenic
AAATCGGAGGTTCGTGTAGG+GGG 0.555926 7.2:+26125920 MS.gene033431:CDS
TGTTTGTGGACTCCGGTGGA+TGG 0.562979 7.2:-26125985 None:intergenic
CCAATAGTCATAGGTGACCT+AGG 0.574680 7.2:-26126012 None:intergenic
AGTTGGGTTGTTCTTGAATG+GGG 0.579967 7.2:+26126275 MS.gene033431:CDS
TAACGTAGTACATACTTCAC+CGG 0.582782 7.2:-26125682 None:intergenic
GTTGGTGATCCATAAAATCA+AGG 0.583053 7.2:-26125888 None:intergenic
TCCATAAAATCAAGGATGGG+TGG 0.589372 7.2:-26125880 None:intergenic
TAGTGCATGGACTGTGGACA+TGG 0.590116 7.2:+26126452 MS.gene033431:CDS
GGTGATATAGTTGGAACAGA+TGG 0.594143 7.2:+26126591 MS.gene033431:CDS
CAAATCGGAGGTTCGTGTAG+GGG 0.594552 7.2:+26125919 MS.gene033431:CDS
TTGATGGGCTTATTAGTGCA+TGG 0.605656 7.2:+26126439 MS.gene033431:CDS
TGATAACAGAAATCCTATTG+AGG 0.606738 7.2:+26125656 MS.gene033431:CDS
TATCTATGGAATCCATCCAC+CGG 0.610615 7.2:+26125973 MS.gene033431:CDS
CTCAAATCGGAGGTTCGTGT+AGG 0.620092 7.2:+26125917 MS.gene033431:CDS
TATTTGTTTGTGGACTCCGG+TGG 0.635344 7.2:-26125989 None:intergenic
TATGGACAAAAGGTTGTGTG+TGG 0.643394 7.2:-26125785 None:intergenic
TAATAACTGGAAACAAGTTG+AGG 0.646892 7.2:+26126200 MS.gene033431:CDS
GAGTCCACAAACAAATACCT+AGG 0.656423 7.2:+26125995 MS.gene033431:CDS
TGATCCATAAAATCAAGGAT+GGG 0.658623 7.2:-26125883 None:intergenic
AAGGTTGTGTGTGGGTGAGG+CGG 0.658631 7.2:-26125776 None:intergenic
GACTGTGGACATGGATACAG+TGG 0.664275 7.2:+26126461 MS.gene033431:CDS
GCTTATTAGTGCATGGACTG+TGG 0.676134 7.2:+26126446 MS.gene033431:CDS
CAACAACATCCTCAAATCGG+AGG 0.684331 7.2:+26125907 MS.gene033431:CDS
ATGGACAAAAGGTTGTGTGT+GGG 0.716607 7.2:-26125784 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTAAGGTTTTTGTA+TGG + chr7.2:26126060-26126079 MS.gene033431:CDS 15.0%
!! ATAGTCATTATAGCATTTAT+AGG - chr7.2:26126133-26126152 None:intergenic 20.0%
!! TAAGTAACACAAAAATCATT+TGG - chr7.2:26126393-26126412 None:intergenic 20.0%
!! TATTATTGTCCTTGATTTAA+AGG + chr7.2:26126341-26126360 MS.gene033431:CDS 20.0%
!! TTAGTATTAATGACCATATA+AGG - chr7.2:26126240-26126259 None:intergenic 20.0%
!!! TTCTATACAATATGATTTGT+TGG + chr7.2:26126413-26126432 MS.gene033431:CDS 20.0%
! AATGCTATAATGACTATGAT+CGG + chr7.2:26126136-26126155 MS.gene033431:CDS 25.0%
! CACAATTTGTAAAGTATACT+AGG - chr7.2:26126572-26126591 None:intergenic 25.0%
! CTAGTATACTTTACAAATTG+TGG + chr7.2:26126570-26126589 MS.gene033431:CDS 25.0%
! GACAATAATAACAACAATGT+TGG - chr7.2:26126331-26126350 None:intergenic 25.0%
! TTGGTGAAGTTTAATTACAA+AGG + chr7.2:26126624-26126643 MS.gene033431:CDS 25.0%
!! TGGTTTTCATTTACCTTATA+TGG + chr7.2:26126224-26126243 MS.gene033431:CDS 25.0%
!! TTCTCAATCGCAATATTTTA+AGG + chr7.2:26126049-26126068 MS.gene033431:CDS 25.0%
!!! ATGATTACTTGGTAGTTTTA+GGG + chr7.2:26126106-26126125 MS.gene033431:CDS 25.0%
AAAGTGTGAAGTTGCAAAAT+TGG - chr7.2:26125749-26125768 None:intergenic 30.0%
AAATCAATGGATAAGGTTTC+AGG - chr7.2:26125826-26125845 None:intergenic 30.0%
AACAGATGGTTATGATGAAT+TGG + chr7.2:26126605-26126624 MS.gene033431:CDS 30.0%
AAGAGATGCATCAAAATCAA+TGG - chr7.2:26125839-26125858 None:intergenic 30.0%
AAGTGTGAAGTTGCAAAATT+GGG - chr7.2:26125748-26125767 None:intergenic 30.0%
AATCAATGGATAAGGTTTCA+GGG - chr7.2:26125825-26125844 None:intergenic 30.0%
ACAAATTGTGGTGATATAGT+TGG + chr7.2:26126582-26126601 MS.gene033431:CDS 30.0%
TAATAACTGGAAACAAGTTG+AGG + chr7.2:26126200-26126219 MS.gene033431:CDS 30.0%
TGATAACAGAAATCCTATTG+AGG + chr7.2:26125656-26125675 MS.gene033431:CDS 30.0%
TGATCCATAAAATCAAGGAT+GGG - chr7.2:26125886-26125905 None:intergenic 30.0%
TGCATCAAAATCAATGGATA+AGG - chr7.2:26125833-26125852 None:intergenic 30.0%
! AATCTTTTCCTATGGACAAA+AGG - chr7.2:26125798-26125817 None:intergenic 30.0%
! AGGGAAATAATCTTTTCCTA+TGG - chr7.2:26125806-26125825 None:intergenic 30.0%
! TTGTCGTTTCCTTTAAATCA+AGG - chr7.2:26126353-26126372 None:intergenic 30.0%
!! GATGATTACTTGGTAGTTTT+AGG + chr7.2:26126105-26126124 MS.gene033431:CDS 30.0%
!! GATTTTGATGCATCTCTTAA+CGG + chr7.2:26125841-26125860 MS.gene033431:CDS 30.0%
!!! TTTTTCAGGTAGATCCAAAA+TGG + chr7.2:26126680-26126699 MS.gene033431:CDS 30.0%
AAGTATACTAGGAAGAAGTC+CGG - chr7.2:26126561-26126580 None:intergenic 35.0%
AATATGCAGTGCATTCATCT+TGG + chr7.2:26126502-26126521 MS.gene033431:CDS 35.0%
ACCAAGTAATCATCAGTTGA+AGG - chr7.2:26126099-26126118 None:intergenic 35.0%
ACCTTCAACTGATGATTACT+TGG + chr7.2:26126095-26126114 MS.gene033431:CDS 35.0%
AGCTTGATTCCAATAGTCAT+AGG - chr7.2:26126024-26126043 None:intergenic 35.0%
AGGATTTCTGTTATCACTTC+CGG - chr7.2:26125652-26125671 None:intergenic 35.0%
CTAGAGAATCTCTCATATCT+TGG + chr7.2:26126654-26126673 MS.gene033431:CDS 35.0%
GTGATCCATAAAATCAAGGA+TGG - chr7.2:26125887-26125906 None:intergenic 35.0%
TAACGTAGTACATACTTCAC+CGG - chr7.2:26125685-26125704 None:intergenic 35.0%
TCTCATTGAGAGCTAATAAC+TGG + chr7.2:26126187-26126206 MS.gene033431:CDS 35.0%
TGAAGTATGTACTACGTTAC+AGG + chr7.2:26125686-26125705 MS.gene033431:CDS 35.0%
! AAAGTTGGGTTGTTCTTGAA+TGG + chr7.2:26126273-26126292 MS.gene033431:CDS 35.0%
! AAGTTGGGTTGTTCTTGAAT+GGG + chr7.2:26126274-26126293 MS.gene033431:CDS 35.0%
! GCTATCTAGTTTGAGTAACT+TGG + chr7.2:26126158-26126177 MS.gene033431:CDS 35.0%
! TTTTTCTATACGTCCTGATC+CGG + chr7.2:26126539-26126558 MS.gene033431:CDS 35.0%
!! ATGATTTGTTGGTGCTTGAT+GGG + chr7.2:26126424-26126443 MS.gene033431:CDS 35.0%
!! GTTGGTGATCCATAAAATCA+AGG - chr7.2:26125891-26125910 None:intergenic 35.0%
!! TATGATTTGTTGGTGCTTGA+TGG + chr7.2:26126423-26126442 MS.gene033431:CDS 35.0%
!!! TCATATCTTGGCTGTTTTTC+AGG + chr7.2:26126666-26126685 MS.gene033431:CDS 35.0%
AACAACCCAACTTTGTTGGA+AGG - chr7.2:26126267-26126286 None:intergenic 40.0%
AATCGTCCTTCCAACAAAGT+TGG + chr7.2:26126258-26126277 MS.gene033431:CDS 40.0%
ACAGGTGTGTTTGCAAATCA+TGG + chr7.2:26125704-26125723 MS.gene033431:CDS 40.0%
ACATGGATACAGTGGAGATT+TGG + chr7.2:26126469-26126488 MS.gene033431:CDS 40.0%
AGAAATCCTATTGAGGTTGC+CGG + chr7.2:26125663-26125682 MS.gene033431:CDS 40.0%
AGGTATTTGTTTGTGGACTC+CGG - chr7.2:26125995-26126014 None:intergenic 40.0%
ATCGTCCTTCCAACAAAGTT+GGG + chr7.2:26126259-26126278 MS.gene033431:CDS 40.0%
ATGGACAAAAGGTTGTGTGT+GGG - chr7.2:26125787-26125806 None:intergenic 40.0%
CAAGAACAACCCAACTTTGT+TGG - chr7.2:26126271-26126290 None:intergenic 40.0%
CACCAACAACATCCTCAAAT+CGG + chr7.2:26125904-26125923 MS.gene033431:CDS 40.0%
CATGGATACAGTGGAGATTT+GGG + chr7.2:26126470-26126489 MS.gene033431:CDS 40.0%
CTGACAAAGGCTTCTATCTA+TGG + chr7.2:26125959-26125978 MS.gene033431:CDS 40.0%
CTTGAATGGGGCTATTCATT+GGG + chr7.2:26126287-26126306 MS.gene033431:CDS 40.0%
GAGTCCACAAACAAATACCT+AGG + chr7.2:26125995-26126014 MS.gene033431:CDS 40.0%
GGTGATATAGTTGGAACAGA+TGG + chr7.2:26126591-26126610 MS.gene033431:CDS 40.0%
GTGACCTAGGTATTTGTTTG+TGG - chr7.2:26126002-26126021 None:intergenic 40.0%
TATCTATGGAATCCATCCAC+CGG + chr7.2:26125973-26125992 MS.gene033431:CDS 40.0%
TATGGACAAAAGGTTGTGTG+TGG - chr7.2:26125788-26125807 None:intergenic 40.0%
TCCATAAAATCAAGGATGGG+TGG - chr7.2:26125883-26125902 None:intergenic 40.0%
TCTTGAATGGGGCTATTCAT+TGG + chr7.2:26126286-26126305 MS.gene033431:CDS 40.0%
! AACTGGAAACAAGTTGAGGT+TGG + chr7.2:26126204-26126223 MS.gene033431:CDS 40.0%
! ACACACAACCTTTTGTCCAT+AGG + chr7.2:26125787-26125806 MS.gene033431:CDS 40.0%
! AGTTGGGTTGTTCTTGAATG+GGG + chr7.2:26126275-26126294 MS.gene033431:CDS 40.0%
! CTCTGTATACACGACCATTT+TGG - chr7.2:26126697-26126716 None:intergenic 40.0%
! TCCACCCATCCTTGATTTTA+TGG + chr7.2:26125879-26125898 MS.gene033431:CDS 40.0%
!! GTGTTTTTGCACTCTGACAA+AGG + chr7.2:26125946-26125965 MS.gene033431:CDS 40.0%
!! TTGATGGGCTTATTAGTGCA+TGG + chr7.2:26126439-26126458 MS.gene033431:CDS 40.0%
ATGAGAGATTCTCTAGCAGC+TGG - chr7.2:26126650-26126669 None:intergenic 45.0%
CAACAACATCCTCAAATCGG+AGG + chr7.2:26125907-26125926 MS.gene033431:CDS 45.0%
CCAATAGTCATAGGTGACCT+AGG - chr7.2:26126015-26126034 None:intergenic 45.0%
CCTAGGTCACCTATGACTAT+TGG + chr7.2:26126012-26126031 MS.gene033431:CDS 45.0%
TATTTGTTTGTGGACTCCGG+TGG - chr7.2:26125992-26126011 None:intergenic 45.0%
TCAAATCGGAGGTTCGTGTA+GGG + chr7.2:26125918-26125937 MS.gene033431:CDS 45.0%
! CTCCGATTTGAGGATGTTGT+TGG - chr7.2:26125909-26125928 None:intergenic 45.0%
! GCTTATTAGTGCATGGACTG+TGG + chr7.2:26126446-26126465 MS.gene033431:CDS 45.0%
AAATCGGAGGTTCGTGTAGG+GGG + chr7.2:26125920-26125939 MS.gene033431:CDS 50.0%
ACTAGGAAGAAGTCCGGATC+AGG - chr7.2:26126555-26126574 None:intergenic 50.0%
ACTTCACCGGCAACCTCAAT+AGG - chr7.2:26125672-26125691 None:intergenic 50.0%
CAAAAGGTTGTGTGTGGGTG+AGG - chr7.2:26125782-26125801 None:intergenic 50.0%
CAAATCGGAGGTTCGTGTAG+GGG + chr7.2:26125919-26125938 MS.gene033431:CDS 50.0%
CTCAAATCGGAGGTTCGTGT+AGG + chr7.2:26125917-26125936 MS.gene033431:CDS 50.0%
GAATGGGGCTATTCATTGGG+TGG + chr7.2:26126290-26126309 MS.gene033431:CDS 50.0%
GACTGTGGACATGGATACAG+TGG + chr7.2:26126461-26126480 MS.gene033431:CDS 50.0%
! AAGAAGCGTGCATCTGCTTC+CGG + chr7.2:26125630-26125649 MS.gene033431:CDS 50.0%
! CTACACGAACCTCCGATTTG+AGG - chr7.2:26125919-26125938 None:intergenic 50.0%
! TAGTGCATGGACTGTGGACA+TGG + chr7.2:26126452-26126471 MS.gene033431:CDS 50.0%
AAGGTTGTGTGTGGGTGAGG+CGG - chr7.2:26125779-26125798 None:intergenic 55.0%
TGTTTGTGGACTCCGGTGGA+TGG - chr7.2:26125988-26126007 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 26125619 26126746 26125619 ID=MS.gene033431
chr7.2 mRNA 26125619 26126746 26125619 ID=MS.gene033431.t1;Parent=MS.gene033431
chr7.2 exon 26125619 26126746 26125619 ID=MS.gene033431.t1.exon1;Parent=MS.gene033431.t1
chr7.2 CDS 26125619 26126746 26125619 ID=cds.MS.gene033431.t1;Parent=MS.gene033431.t1
Gene Sequence

>MS.gene033431

ATGGCTGAGAGAAGAAGCGTGCATCTGCTTCCGGAAGTGATAACAGAAATCCTATTGAGGTTGCCGGTGAAGTATGTACTACGTTACAGGTGTGTTTGCAAATCATGGCTGTCTCTCATCTCTCATCCCAATTTTGCAACTTCACACTTTCATCTTGCCGCCTCACCCACACACAACCTTTTGTCCATAGGAAAAGATTATTTCCCTGAAACCTTATCCATTGATTTTGATGCATCTCTTAACGGTGATTCTGCTTATGTTCCACCCATCCTTGATTTTATGGATCACCAACAACATCCTCAAATCGGAGGTTCGTGTAGGGGGTTTGTGTTTTTGCACTCTGACAAAGGCTTCTATCTATGGAATCCATCCACCGGAGTCCACAAACAAATACCTAGGTCACCTATGACTATTGGAATCAAGCTAAATATTCTCAATCGCAATATTTTAAGGTTTTTGTATGGCTTTGCATACGAACCTTCAACTGATGATTACTTGGTAGTTTTAGGGTCCTATAAATGCTATAATGACTATGATCGGCTATCTAGTTTGAGTAACTTGGAGATTTTCTCATTGAGAGCTAATAACTGGAAACAAGTTGAGGTTGGTTTTCATTTACCTTATATGGTCATTAATACTAATCGTCCTTCCAACAAAGTTGGGTTGTTCTTGAATGGGGCTATTCATTGGGTGGTTCATAATCATGAGACCAACATTGTTGTTATTATTGTCCTTGATTTAAAGGAAACGACAATATCAGAGATAGCTCTGCCAAATGATTTTTGTGTTACTTATTCTATACAATATGATTTGTTGGTGCTTGATGGGCTTATTAGTGCATGGACTGTGGACATGGATACAGTGGAGATTTGGGTGATGCAAGAATATGCAGTGCATTCATCTTGGATTAAGACTCTTGTTTTTTCTATACGTCCTGATCCGGACTTCTTCCTAGTATACTTTACAAATTGTGGTGATATAGTTGGAACAGATGGTTATGATGAATTGGTGAAGTTTAATTACAAAGGCCAGCTGCTAGAGAATCTCTCATATCTTGGCTGTTTTTCAGGTAGATCCAAAATGGTCGTGTATACAGAGTCTCTGCTTTCACTCCCTACTAGCGTTTGA

Protein sequence

>MS.gene033431.t1

MAERRSVHLLPEVITEILLRLPVKYVLRYRCVCKSWLSLISHPNFATSHFHLAASPTHNLLSIGKDYFPETLSIDFDASLNGDSAYVPPILDFMDHQQHPQIGGSCRGFVFLHSDKGFYLWNPSTGVHKQIPRSPMTIGIKLNILNRNILRFLYGFAYEPSTDDYLVVLGSYKCYNDYDRLSSLSNLEIFSLRANNWKQVEVGFHLPYMVINTNRPSNKVGLFLNGAIHWVVHNHETNIVVIIVLDLKETTISEIALPNDFCVTYSIQYDLLVLDGLISAWTVDMDTVEIWVMQEYAVHSSWIKTLVFSIRPDPDFFLVYFTNCGDIVGTDGYDELVKFNYKGQLLENLSYLGCFSGRSKMVVYTESLLSLPTSV