AlfalfaGEDB | MS.gene063670

M. sativa cultivar XinJiangDaYe / MS.gene063670

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063670.t1	RHN53220.1	90	140	14	0	6	145	161	300	2.60E-70	275

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063670.t1	A0A396HIQ7	90.0	140	14	0	6	145	161	300	1.9e-70	275.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene019505	MS.gene063670	PPI
MS.gene50306	MS.gene063670	PPI
MS.gene58785	MS.gene063670	PPI
MS.gene063670	MS.gene40886	PPI
MS.gene063670	MS.gene033081	PPI
MS.gene26949	MS.gene063670	PPI
MS.gene063670	MS.gene68580	PPI
MS.gene063670	MS.gene041391	PPI
MS.gene036760	MS.gene063670	PPI
MS.gene063670	MS.gene033443	PPI
MS.gene063670	MS.gene57525	PPI
MS.gene58311	MS.gene063670	PPI
MS.gene063670	MS.gene030114	PPI
MS.gene57527	MS.gene063670	PPI
MS.gene033432	MS.gene063670	PPI
MS.gene063670	MS.gene045474	PPI
MS.gene033426	MS.gene063670	PPI
MS.gene063670	MS.gene058701	PPI
MS.gene063670	MS.gene036558	PPI
MS.gene59639	MS.gene063670	PPI
MS.gene063670	MS.gene87554	PPI
MS.gene063670	MS.gene009891	PPI
MS.gene063670	MS.gene27051	PPI
MS.gene67687	MS.gene063670	PPI
MS.gene063670	MS.gene40984	PPI
MS.gene063670	MS.gene064108	PPI
MS.gene063670	MS.gene048193	PPI
MS.gene063670	MS.gene016220	PPI
MS.gene063670	MS.gene24208	PPI
MS.gene019506	MS.gene063670	PPI
MS.gene50326	MS.gene063670	PPI
MS.gene063670	MS.gene57531	PPI
MS.gene69309	MS.gene063670	PPI
MS.gene063670	MS.gene58240	PPI
MS.gene063670	MS.gene27284	PPI
MS.gene063670	MS.gene57717	PPI
MS.gene063670	MS.gene034680	PPI
MS.gene063670	MS.gene48221	PPI
MS.gene034686	MS.gene063670	PPI
MS.gene063670	MS.gene044563	PPI
MS.gene070461	MS.gene063670	PPI
MS.gene42452	MS.gene063670	PPI
MS.gene063670	MS.gene50327	PPI
MS.gene063670	MS.gene066626	PPI
MS.gene063670	MS.gene063474	PPI
MS.gene063670	MS.gene51190	PPI
MS.gene063670	MS.gene58319	PPI
MS.gene063670	MS.gene71159	PPI
MS.gene063670	MS.gene044426	PPI
MS.gene063670	MS.gene034681	PPI
MS.gene87563	MS.gene063670	PPI
MS.gene063670	MS.gene57532	PPI
MS.gene57526	MS.gene063670	PPI
MS.gene063670	MS.gene033442	PPI
MS.gene051820	MS.gene063670	PPI
MS.gene97996	MS.gene063670	PPI
MS.gene063670	MS.gene009892	PPI
MS.gene81242	MS.gene063670	PPI
MS.gene26101	MS.gene063670	PPI
MS.gene27283	MS.gene063670	PPI
MS.gene063670	MS.gene44428	PPI
MS.gene063670	MS.gene058669	PPI
MS.gene64203	MS.gene063670	PPI
MS.gene063670	MS.gene066120	PPI
MS.gene063670	MS.gene035235	PPI
MS.gene42444	MS.gene063670	PPI
MS.gene51202	MS.gene063670	PPI
MS.gene063670	MS.gene041489	PPI
MS.gene87562	MS.gene063670	PPI
MS.gene063670	MS.gene36704	PPI
MS.gene063670	MS.gene024000	PPI
MS.gene063670	MS.gene034688	PPI
MS.gene063670	MS.gene24213	PPI
MS.gene063670	MS.gene31637	PPI
MS.gene063670	MS.gene033079	PPI
MS.gene063670	MS.gene034677	PPI
MS.gene063670	MS.gene055694	PPI
MS.gene064104	MS.gene063670	PPI
MS.gene063670	MS.gene059101	PPI
MS.gene063670	MS.gene035238	PPI
MS.gene041491	MS.gene063670	PPI
MS.gene063670	MS.gene58316	PPI
MS.gene063670	MS.gene033430	PPI
MS.gene063670	MS.gene064114	PPI
MS.gene063670	MS.gene87584	PPI
MS.gene43789	MS.gene063670	PPI
MS.gene059096	MS.gene063670	PPI
MS.gene57528	MS.gene063670	PPI
MS.gene063670	MS.gene58315	PPI
MS.gene063670	MS.gene80610	PPI
MS.gene006711	MS.gene063670	PPI
MS.gene072177	MS.gene063670	PPI
MS.gene064091	MS.gene063670	PPI
MS.gene063670	MS.gene90743	PPI
MS.gene045476	MS.gene063670	PPI
MS.gene50307	MS.gene063670	PPI
MS.gene43796	MS.gene063670	PPI
MS.gene034690	MS.gene063670	PPI
MS.gene063670	MS.gene85454	PPI
MS.gene063670	MS.gene064112	PPI
MS.gene063670	MS.gene036556	PPI
MS.gene58312	MS.gene063670	PPI
MS.gene063670	MS.gene060367	PPI
MS.gene063670	MS.gene27319	PPI
MS.gene77857	MS.gene063670	PPI
MS.gene063670	MS.gene57536	PPI
MS.gene51191	MS.gene063670	PPI
MS.gene063670	MS.gene51200	PPI
MS.gene063670	MS.gene021553	PPI
MS.gene063670	MS.gene44887	PPI
MS.gene50298	MS.gene063670	PPI
MS.gene063670	MS.gene064083	PPI
MS.gene036583	MS.gene063670	PPI
MS.gene88780	MS.gene063670	PPI
MS.gene063670	MS.gene58783	PPI
MS.gene063670	MS.gene024420	PPI
MS.gene063670	MS.gene57533	PPI
MS.gene063670	MS.gene024008	PPI
MS.gene063670	MS.gene50337	PPI
MS.gene063670	MS.gene54541	PPI
MS.gene063670	MS.gene39265	PPI
MS.gene063670	MS.gene036584	PPI
MS.gene063670	MS.gene041393	PPI
MS.gene71159	MS.gene063670	PPI
MS.gene96448	MS.gene063670	PPI
MS.gene063670	MS.gene060368	PPI
MS.gene063670	MS.gene053299	PPI
MS.gene058692	MS.gene063670	PPI
MS.gene041392	MS.gene063670	PPI
MS.gene063670	MS.gene28758	PPI
MS.gene063670	MS.gene044429	PPI
MS.gene063670	MS.gene42451	PPI
MS.gene063670	MS.gene50304	PPI
MS.gene63658	MS.gene063670	PPI
MS.gene033081	MS.gene063670	PPI
MS.gene063670	MS.gene019503	PPI
MS.gene031591	MS.gene063670	PPI
MS.gene063670	MS.gene69307	PPI
MS.gene063670	MS.gene033431	PPI
MS.gene019503	MS.gene063670	PPI
MS.gene063670	MS.gene034762	PPI
MS.gene063670	MS.gene59943	PPI
MS.gene87559	MS.gene063670	PPI
MS.gene063670	MS.gene67501	PPI
MS.gene063670	MS.gene96406	PPI
MS.gene063670	MS.gene035262	PPI
MS.gene041475	MS.gene063670	PPI
MS.gene31587	MS.gene063670	PPI
MS.gene033441	MS.gene063670	PPI
MS.gene063670	MS.gene028390	PPI
MS.gene063670	MS.gene40878	PPI
MS.gene063670	MS.gene96407	PPI
MS.gene063826	MS.gene063670	PPI
MS.gene063670	MS.gene058703	PPI
MS.gene44892	MS.gene063670	PPI
MS.gene58239	MS.gene063670	PPI
MS.gene063670	MS.gene024002	PPI
MS.gene063670	MS.gene012215	PPI
MS.gene000038	MS.gene063670	PPI
MS.gene57531	MS.gene063670	PPI
MS.gene064111	MS.gene063670	PPI
MS.gene063670	MS.gene50297	PPI
MS.gene26829	MS.gene063670	PPI
MS.gene39262	MS.gene063670	PPI
MS.gene053256	MS.gene063670	PPI
MS.gene063670	MS.gene22715	PPI
MS.gene063670	MS.gene038756	PPI
MS.gene75875	MS.gene063670	PPI
MS.gene041470	MS.gene063670	PPI
MS.gene058694	MS.gene063670	PPI
MS.gene063670	MS.gene51207	PPI
MS.gene063670	MS.gene58321	PPI
MS.gene54049	MS.gene063670	PPI
MS.gene063670	MS.gene87564	PPI
MS.gene063670	MS.gene36595	PPI
MS.gene063670	MS.gene024004	PPI
MS.gene063670	MS.gene045140	PPI
MS.gene015089	MS.gene063670	PPI
MS.gene006710	MS.gene063670	PPI
MS.gene58722	MS.gene063670	PPI
MS.gene063670	MS.gene061240	PPI
MS.gene063670	MS.gene041473	PPI
MS.gene063670	MS.gene50311	PPI
MS.gene64001	MS.gene063670	PPI
MS.gene57533	MS.gene063670	PPI
MS.gene063670	MS.gene035234	PPI
MS.gene063670	MS.gene058989	PPI
MS.gene36704	MS.gene063670	PPI
MS.gene032970	MS.gene063670	PPI
MS.gene063670	MS.gene57538	PPI
MS.gene063670	MS.gene041468	PPI
MS.gene063670	MS.gene058693	PPI
MS.gene063670	MS.gene015089	PPI
MS.gene77856	MS.gene063670	PPI
MS.gene063670	MS.gene041395	PPI
MS.gene063670	MS.gene42447	PPI
MS.gene58313	MS.gene063670	PPI
MS.gene063670	MS.gene51189	PPI
MS.gene066622	MS.gene063670	PPI
MS.gene44887	MS.gene063670	PPI
MS.gene063670	MS.gene046958	PPI
MS.gene63655	MS.gene063670	PPI
MS.gene44883	MS.gene063670	PPI
MS.gene063670	MS.gene24286	PPI
MS.gene063670	MS.gene044425	PPI
MS.gene41046	MS.gene063670	PPI
MS.gene87588	MS.gene063670	PPI
MS.gene017412	MS.gene063670	PPI
MS.gene063670	MS.gene40988	PPI
MS.gene063670	MS.gene59637	PPI
MS.gene80884	MS.gene063670	PPI
MS.gene063670	MS.gene24173	PPI
MS.gene063670	MS.gene036662	PPI
MS.gene009883	MS.gene063670	PPI
MS.gene063670	MS.gene27022	PPI
MS.gene069075	MS.gene063670	PPI
MS.gene033427	MS.gene063670	PPI
MS.gene063670	MS.gene035261	PPI
MS.gene063670	MS.gene87585	PPI
MS.gene063670	MS.gene023999	PPI
MS.gene041474	MS.gene063670	PPI
MS.gene063670	MS.gene42444	PPI
MS.gene27020	MS.gene063670	PPI
MS.gene063670	MS.gene036581	PPI
MS.gene063670	MS.gene019507	PPI
MS.gene041388	MS.gene063670	PPI
MS.gene063670	MS.gene035237	PPI
MS.gene96126	MS.gene063670	PPI
MS.gene51208	MS.gene063670	PPI
MS.gene063670	MS.gene000036	PPI
MS.gene016524	MS.gene063670	PPI
MS.gene50304	MS.gene063670	PPI
MS.gene063670	MS.gene50320	PPI
MS.gene063670	MS.gene58314	PPI
MS.gene063670	MS.gene87557	PPI
MS.gene045475	MS.gene063670	PPI
MS.gene063670	MS.gene51199	PPI
MS.gene063670	MS.gene035263	PPI
MS.gene88776	MS.gene063670	PPI
MS.gene90744	MS.gene063670	PPI
MS.gene063670	MS.gene27285	PPI
MS.gene51204	MS.gene063670	PPI
MS.gene063670	MS.gene053257	PPI
MS.gene063670	MS.gene77858	PPI
MS.gene036557	MS.gene063670	PPI
MS.gene041393	MS.gene063670	PPI
MS.gene50329	MS.gene063670	PPI
MS.gene063670	MS.gene51201	PPI
MS.gene063670	MS.gene045475	PPI
MS.gene063670	MS.gene50336	PPI
MS.gene063670	MS.gene57526	PPI
MS.gene57537	MS.gene063670	PPI
MS.gene063670	MS.gene77704	PPI
MS.gene059156	MS.gene063670	PPI
MS.gene84698	MS.gene063670	PPI
MS.gene063670	MS.gene047279	PPI
MS.gene063670	MS.gene060370	PPI
MS.gene063670	MS.gene50305	PPI
MS.gene066641	MS.gene063670	PPI
MS.gene82082	MS.gene063670	PPI
MS.gene063670	MS.gene032969	PPI
MS.gene063670	MS.gene68890	PPI
MS.gene063670	MS.gene42445	PPI
MS.gene063670	MS.gene86273	PPI
MS.gene063670	MS.gene036663	PPI
MS.gene063670	MS.gene26830	PPI
MS.gene57535	MS.gene063670	PPI
MS.gene063670	MS.gene40985	PPI
MS.gene025887	MS.gene063670	PPI
MS.gene063670	MS.gene63657	PPI
MS.gene87200	MS.gene063670	PPI
MS.gene063670	MS.gene059157	PPI
MS.gene063670	MS.gene023996	PPI
MS.gene063670	MS.gene045473	PPI
MS.gene063670	MS.gene50301	PPI
MS.gene063670	MS.gene070462	PPI
MS.gene063670	MS.gene88774	PPI
MS.gene063670	MS.gene54049	PPI
MS.gene063670	MS.gene031590	PPI
MS.gene44885	MS.gene063670	PPI
MS.gene011679	MS.gene063670	PPI
MS.gene066635	MS.gene063670	PPI
MS.gene063670	MS.gene066623	PPI
MS.gene063670	MS.gene064086	PPI
MS.gene063670	MS.gene064090	PPI
MS.gene010758	MS.gene063670	PPI
MS.gene063670	MS.gene58317	PPI
MS.gene87586	MS.gene063670	PPI
MS.gene063670	MS.gene57528	PPI
MS.gene063670	MS.gene90742	PPI
MS.gene063670	MS.gene24212	PPI
MS.gene063670	MS.gene066639	PPI
MS.gene063670	MS.gene50332	PPI
MS.gene063670	MS.gene024979	PPI
MS.gene063670	MS.gene64203	PPI
MS.gene50339	MS.gene063670	PPI
MS.gene060366	MS.gene063670	PPI
MS.gene063670	MS.gene24826	PPI
MS.gene063670	MS.gene063472	PPI
MS.gene063670	MS.gene43790	PPI
MS.gene063670	MS.gene032970	PPI
MS.gene063670	MS.gene27021	PPI
MS.gene57529	MS.gene063670	PPI
MS.gene063670	MS.gene40982	PPI
MS.gene063414	MS.gene063670	PPI
MS.gene063670	MS.gene88416	PPI
MS.gene063670	MS.gene57530	PPI
MS.gene40902	MS.gene063670	PPI
MS.gene063670	MS.gene003076	PPI
MS.gene063670	MS.gene024009	PPI
MS.gene063670	MS.gene036599	PPI
MS.gene021553	MS.gene063670	PPI
MS.gene063670	MS.gene40887	PPI
MS.gene26957	MS.gene063670	PPI
MS.gene063670	MS.gene26101	PPI
MS.gene036582	MS.gene063670	PPI
MS.gene27021	MS.gene063670	PPI
MS.gene066620	MS.gene063670	PPI
MS.gene035236	MS.gene063670	PPI
MS.gene58320	MS.gene063670	PPI
MS.gene063670	MS.gene006705	PPI
MS.gene063670	MS.gene061241	PPI
MS.gene063670	MS.gene51192	PPI
MS.gene063670	MS.gene51188	PPI
MS.gene063670	MS.gene033875	PPI
MS.gene58781	MS.gene063670	PPI
MS.gene011106	MS.gene063670	PPI
MS.gene62398	MS.gene063670	PPI
MS.gene063670	MS.gene38220	PPI
MS.gene60027	MS.gene063670	PPI
MS.gene063670	MS.gene40986	PPI
MS.gene063670	MS.gene50309	PPI
MS.gene44886	MS.gene063670	PPI
MS.gene063670	MS.gene041394	PPI
MS.gene40904	MS.gene063670	PPI
MS.gene063670	MS.gene03060	PPI
MS.gene35068	MS.gene063670	PPI
MS.gene063670	MS.gene033440	PPI
MS.gene063670	MS.gene036664	PPI
MS.gene041390	MS.gene063670	PPI
MS.gene063670	MS.gene024011	PPI
MS.gene92376	MS.gene063670	PPI
MS.gene063670	MS.gene58241	PPI
MS.gene000035	MS.gene063670	PPI
MS.gene063670	MS.gene064109	PPI
MS.gene87569	MS.gene063670	PPI
MS.gene063670	MS.gene058696	PPI
MS.gene063670	MS.gene009893	PPI
MS.gene31637	MS.gene063670	PPI
MS.gene87573	MS.gene063670	PPI
MS.gene063670	MS.gene85043	PPI
MS.gene019504	MS.gene063670	PPI
MS.gene063670	MS.gene062698	PPI
MS.gene063670	MS.gene033083	PPI
MS.gene58716	MS.gene063670	PPI
MS.gene033444	MS.gene063670	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063670.t1	MTR_4g117720	63.298	188	64	4	6	192	159	342	5.45e-75	230
MS.gene063670.t1	MTR_6g060650	61.170	188	67	5	6	192	161	343	8.70e-73	224
MS.gene063670.t1	MTR_3g103020	61.257	191	67	5	6	192	161	348	3.55e-72	223
MS.gene063670.t1	MTR_4g109270	62.567	187	62	4	6	191	154	333	5.37e-69	214
MS.gene063670.t1	MTR_4g116330	55.080	187	80	3	6	192	166	348	5.00e-68	212
MS.gene063670.t1	MTR_3g034130	54.545	198	75	5	6	192	153	346	2.08e-67	210
MS.gene063670.t1	MTR_4g117850	55.208	192	80	3	6	192	159	349	4.02e-65	205
MS.gene063670.t1	MTR_4g109280	62.195	164	57	4	29	192	169	327	8.28e-64	201
MS.gene063670.t1	MTR_8g040935	55.932	177	75	3	18	192	1	176	2.12e-63	195
MS.gene063670.t1	MTR_3g034180	55.051	198	73	6	6	192	267	459	6.65e-63	202
MS.gene063670.t1	MTR_4g023130	56.150	187	71	5	6	191	108	284	9.45e-63	197
MS.gene063670.t1	MTR_4g117870	55.851	188	43	4	6	192	89	237	4.62e-62	193
MS.gene063670.t1	MTR_4g118380	56.345	197	71	6	6	192	163	354	5.66e-62	196
MS.gene063670.t1	MTR_4g116320	55.263	190	75	5	7	192	43	226	2.10e-61	191
MS.gene063670.t1	MTR_3g034160	56.566	198	71	6	6	192	153	346	9.83e-61	193
MS.gene063670.t1	MTR_4g023080	54.545	187	74	5	6	191	149	325	2.93e-60	191
MS.gene063670.t1	MTR_4g117770	55.556	189	76	5	6	191	153	336	3.74e-60	192
MS.gene063670.t1	MTR_4g117810	55.556	189	76	5	6	191	153	336	3.74e-60	192
MS.gene063670.t1	MTR_4g094365	53.439	189	80	5	6	192	152	334	1.21e-59	190
MS.gene063670.t1	MTR_8g433030	53.968	189	83	4	6	192	128	314	1.25e-59	189
MS.gene063670.t1	MTR_4g117780	54.497	189	78	5	6	191	153	336	1.92e-59	190
MS.gene063670.t1	MTR_8g032390	53.968	189	83	4	6	192	161	347	2.92e-59	189
MS.gene063670.t1	MTR_4g021785	53.226	186	79	4	6	191	149	326	3.08e-58	186
MS.gene063670.t1	MTR_4g023090	49.751	201	82	5	6	192	161	356	2.05e-56	182
MS.gene063670.t1	MTR_4g023070	49.754	203	81	5	6	191	143	341	1.92e-55	180
MS.gene063670.t1	MTR_4g023120	49.754	203	81	6	6	191	143	341	1.64e-54	177
MS.gene063670.t1	MTR_4g122850	51.562	192	84	8	6	192	147	334	1.67e-54	177
MS.gene063670.t1	MTR_6g463430	53.933	178	71	5	18	191	1	171	1.01e-53	170
MS.gene063670.t1	MTR_5g097210	50.000	192	86	6	6	192	147	333	1.84e-51	169
MS.gene063670.t1	MTR_4g023380	47.368	209	68	5	6	192	161	349	2.53e-51	169
MS.gene063670.t1	MTR_5g070130	48.718	195	91	5	6	192	153	346	3.32e-51	169
MS.gene063670.t1	MTR_5g070080	49.468	188	91	4	6	192	171	355	1.61e-50	167
MS.gene063670.t1	MTR_1g055250	47.917	192	89	7	6	192	53	238	1.66e-49	163
MS.gene063670.t1	MTR_8g433040	50.526	190	78	5	6	192	160	336	2.71e-49	164
MS.gene063670.t1	MTR_8g032380	50.526	190	78	5	6	192	160	336	2.71e-49	164
MS.gene063670.t1	MTR_4g023190	52.332	193	74	7	6	192	151	331	2.59e-48	161
MS.gene063670.t1	MTR_4g023200	50.262	191	82	6	6	192	151	332	5.96e-47	157
MS.gene063670.t1	MTR_4g118400	53.614	166	60	5	27	192	122	270	6.72e-47	155
MS.gene063670.t1	MTR_4g118370	47.938	194	70	8	6	192	61	230	8.34e-47	154
MS.gene063670.t1	MTR_1g055195	47.959	196	80	10	6	192	266	448	1.87e-46	159
MS.gene063670.t1	MTR_1g055175	49.711	173	78	7	24	192	3	170	2.68e-46	151
MS.gene063670.t1	MTR_4g023150	50.259	193	79	7	6	192	151	332	3.06e-46	155
MS.gene063670.t1	MTR_4g116330	45.455	187	59	3	6	192	166	309	4.07e-46	155
MS.gene063670.t1	MTR_5g070088	46.073	191	97	4	6	192	167	355	9.83e-45	152
MS.gene063670.t1	MTR_4g117530	45.989	187	63	4	6	192	78	226	3.61e-44	147
MS.gene063670.t1	MTR_1g055135	45.918	196	93	7	6	192	153	344	3.85e-44	150
MS.gene063670.t1	MTR_4g121580	48.936	188	62	6	6	189	161	318	7.20e-43	147
MS.gene063670.t1	MTR_5g023000	95.652	69	3	0	124	192	1	69	2.69e-42	137
MS.gene063670.t1	MTR_4g117750	48.515	202	81	11	6	192	136	329	8.01e-41	144
MS.gene063670.t1	MTR_4g117750	57.692	104	36	1	97	192	350	453	3.23e-30	115
MS.gene063670.t1	MTR_4g023440	44.385	187	62	3	6	192	160	304	2.48e-40	139
MS.gene063670.t1	MTR_7g079400	44.330	194	95	8	6	192	115	302	8.30e-39	135
MS.gene063670.t1	MTR_1g055165	51.825	137	60	5	57	192	156	287	4.68e-37	130
MS.gene063670.t1	MTR_8g098830	46.707	167	77	8	30	191	35	194	4.36e-36	126
MS.gene063670.t1	MTR_7g079370	43.655	197	96	8	5	192	135	325	5.12e-36	129
MS.gene063670.t1	MTR_4g117430	55.462	119	44	4	6	124	46	155	5.34e-35	121
MS.gene063670.t1	MTR_8g102520	41.026	195	100	8	6	192	104	291	1.69e-34	124
MS.gene063670.t1	MTR_8g013010	54.472	123	48	5	6	127	200	315	1.95e-34	124
MS.gene063670.t1	MTR_4g118360	71.084	83	20	2	110	192	16	94	1.83e-32	113
MS.gene063670.t1	MTR_4g122860	41.718	163	61	5	35	192	157	290	5.66e-30	112
MS.gene063670.t1	MTR_4g114700	37.037	189	68	3	6	192	55	194	2.23e-27	103
MS.gene063670.t1	MTR_7g079420	35.567	194	82	9	6	192	956	1113	2.37e-22	94.4
MS.gene063670.t1	MTR_7g079450	47.748	111	52	3	82	192	2	106	6.82e-22	87.0
MS.gene063670.t1	MTR_2g048580	36.905	168	89	8	30	192	158	313	3.24e-21	89.4
MS.gene063670.t1	MTR_4g116340	53.012	83	35	4	6	87	168	247	2.19e-18	80.5
MS.gene063670.t1	MTR_6g034720	41.085	129	65	6	6	129	77	199	1.26e-17	77.8
MS.gene063670.t1	MTR_7g117720	68.966	58	17	1	135	191	186	243	2.63e-17	77.8
MS.gene063670.t1	MTR_4g133170	31.551	187	114	8	6	185	147	326	1.45e-16	77.0
MS.gene063670.t1	MTR_2g028160	35.762	151	82	7	29	170	194	338	4.21e-16	75.9
MS.gene063670.t1	MTR_2g028130	30.729	192	117	7	6	187	168	353	4.33e-16	75.5
MS.gene063670.t1	MTR_2g426020	28.342	187	121	6	6	187	165	343	7.40e-16	75.1
MS.gene063670.t1	MTR_2g025960	30.114	176	112	6	6	176	73	242	2.99e-15	72.8
MS.gene063670.t1	MTR_0667s0010	29.508	183	111	7	6	176	157	333	5.75e-15	72.4
MS.gene063670.t1	MTR_2g026010	30.348	201	111	9	6	190	143	330	9.92e-14	68.9
MS.gene063670.t1	MTR_8g099460	29.834	181	110	7	6	182	158	325	1.28e-13	68.6
MS.gene063670.t1	MTR_2g425980	31.658	199	117	8	6	191	163	355	4.77e-13	67.0
MS.gene063670.t1	MTR_1g068860	29.012	162	103	6	6	160	146	302	9.80e-13	65.9
MS.gene063670.t1	MTR_2g025420	29.518	166	100	6	29	183	197	356	1.34e-12	65.5
MS.gene063670.t1	MTR_2g021050	28.218	202	124	8	6	192	135	330	3.43e-12	64.3
MS.gene063670.t1	MTR_1g068875	28.421	190	120	9	12	191	150	333	3.47e-12	64.3
MS.gene063670.t1	MTR_3g083010	28.497	193	121	7	6	187	173	359	9.23e-12	63.2
MS.gene063670.t1	MTR_4g023430	57.143	49	21	0	144	192	141	189	2.78e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063670.t1	AT3G06240	28.177	181	111	6	10	185	222	388	8.56e-12	63.5

Find 34 sgRNAs with CRISPR-Local

Find 48 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGCTTAGTATTAGCTAATT+TGG	0.070994	5.3:-13378429	None:intergenic
ACTTGTGATGTGTGGGTATT+TGG	0.192835	5.3:+13378689	MS.gene063670:CDS
ACTGATTACCCTAAAATAAT+AGG	0.192838	5.3:+13378527	MS.gene063670:CDS
TTGGAGAATTTCTCAGTATA+TGG	0.237144	5.3:+13378708	MS.gene063670:CDS
TGCTTAGTATTAGCTAATTT+GGG	0.241281	5.3:-13378428	None:intergenic
GTCAACAGATGATTACTTCT+TGG	0.329019	5.3:+13378388	MS.gene063670:CDS
CTAATGATACAGTTGAAATA+TGG	0.329864	5.3:+13378744	MS.gene063670:CDS
ATTAGCTAATACTAAGCATT+TGG	0.343978	5.3:+13378433	MS.gene063670:CDS
TCAGTAGAGGAATTGGTATA+AGG	0.366239	5.3:-13378509	None:intergenic
AGGGTAATCAGTAGAGGAAT+TGG	0.367467	5.3:-13378516	None:intergenic
CTGATTACCCTAAAATAATA+GGG	0.399318	5.3:+13378528	MS.gene063670:CDS
TGGAGAATTTCTCAGTATAT+GGG	0.404173	5.3:+13378709	MS.gene063670:CDS
CAGTAGAGGAATTGGTATAA+GGG	0.429509	5.3:-13378508	None:intergenic
TTGCCTTTGACTTAATCAAA+AGG	0.429640	5.3:+13378618	MS.gene063670:CDS
GCTTCATAGTCAATATCAAA+TGG	0.437341	5.3:-13378662	None:intergenic
AATACGAAGTGCATTCGTCT+TGG	0.467526	5.3:+13378777	MS.gene063670:CDS
TGCCTTTGACTTAATCAAAA+GGG	0.476859	5.3:+13378619	MS.gene063670:CDS
ATTTCTCAGTATATGGGCTA+TGG	0.479112	5.3:+13378715	MS.gene063670:CDS
GATATCATTGGAACAGAAGA+TGG	0.479823	5.3:+13378875	MS.gene063670:CDS
TAATACATGGAAAGAAATTG+AGG	0.507096	5.3:+13378475	MS.gene063670:CDS
TATAGGGGAAAATAGCTTAG+TGG	0.510161	5.3:-13378834	None:intergenic
TCTCATTGAGAGCTAATACA+TGG	0.515391	5.3:+13378462	MS.gene063670:CDS
CTTCATAGTCAATATCAAAT+GGG	0.517578	5.3:-13378661	None:intergenic
AACAGAAGATGGATGGAGAT+TGG	0.542542	5.3:+13378886	MS.gene063670:CDS
TAATGATACAGTTGAAATAT+GGG	0.542942	5.3:+13378745	MS.gene063670:CDS
TCATTGGAACAGAAGATGGA+TGG	0.561647	5.3:+13378879	MS.gene063670:CDS
TCGTCATGATCATTTACGAA+AGG	0.567831	5.3:+13378586	MS.gene063670:CDS
AATACATGGAAAGAAATTGA+GGG	0.567862	5.3:+13378476	MS.gene063670:CDS
TAGTCAATATCAAATGGGAG+AGG	0.576315	5.3:-13378656	None:intergenic
GCTTAGTATTAGCTAATTTG+GGG	0.598307	5.3:-13378427	None:intergenic
AGTCAATATCAAATGGGAGA+GGG	0.616754	5.3:-13378655	None:intergenic
AGCTACAACTTGTGATGTGT+GGG	0.618454	5.3:+13378682	MS.gene063670:CDS
AAGCTACAACTTGTGATGTG+TGG	0.628824	5.3:+13378681	MS.gene063670:CDS
TTGGTGAAGTATAATGACAA+AGG	0.639076	5.3:+13378905	MS.gene063670:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATGATACAGTTGAAATAT+GGG	+	chr5.3:13378745-13378764	MS.gene063670:CDS	20.0%
!	AATACATGGAAAGAAATTGA+GGG	+	chr5.3:13378476-13378495	MS.gene063670:CDS	25.0%
!	ACTGATTACCCTAAAATAAT+AGG	+	chr5.3:13378527-13378546	MS.gene063670:CDS	25.0%
!	ATGCTTAGTATTAGCTAATT+TGG	-	chr5.3:13378432-13378451	None:intergenic	25.0%
!	ATTAGCTAATACTAAGCATT+TGG	+	chr5.3:13378433-13378452	MS.gene063670:CDS	25.0%
!	CTAATGATACAGTTGAAATA+TGG	+	chr5.3:13378744-13378763	MS.gene063670:CDS	25.0%
!	CTGATTACCCTAAAATAATA+GGG	+	chr5.3:13378528-13378547	MS.gene063670:CDS	25.0%
!	CTTCATAGTCAATATCAAAT+GGG	-	chr5.3:13378664-13378683	None:intergenic	25.0%
!	TAATACATGGAAAGAAATTG+AGG	+	chr5.3:13378475-13378494	MS.gene063670:CDS	25.0%
!	TGCTTAGTATTAGCTAATTT+GGG	-	chr5.3:13378431-13378450	None:intergenic	25.0%
!!	AAAAGAGACCCTATTATTTT+AGG	-	chr5.3:13378539-13378558	None:intergenic	25.0%
!!	ACTTTTTGTAGAACATATAG+GGG	-	chr5.3:13378852-13378871	None:intergenic	25.0%
!!	ATAATAGGGTCTCTTTTTAA+TGG	+	chr5.3:13378542-13378561	MS.gene063670:CDS	25.0%
!!	TAATAGGGTCTCTTTTTAAT+GGG	+	chr5.3:13378543-13378562	MS.gene063670:CDS	25.0%
!!!	AAAGAGACCCTATTATTTTA+GGG	-	chr5.3:13378538-13378557	None:intergenic	25.0%
!!!	CACTTTTTGTAGAACATATA+GGG	-	chr5.3:13378853-13378872	None:intergenic	25.0%
	ACAAAAAGTGGTGATATCAT+TGG	+	chr5.3:13378863-13378882	MS.gene063670:CDS	30.0%
	CCTATATGTTCTACAAAAAG+TGG	+	chr5.3:13378851-13378870	MS.gene063670:CDS	30.0%
	GCTTAGTATTAGCTAATTTG+GGG	-	chr5.3:13378430-13378449	None:intergenic	30.0%
	GCTTCATAGTCAATATCAAA+TGG	-	chr5.3:13378665-13378684	None:intergenic	30.0%
	TGGAGAATTTCTCAGTATAT+GGG	+	chr5.3:13378709-13378728	MS.gene063670:CDS	30.0%
	TTGGAGAATTTCTCAGTATA+TGG	+	chr5.3:13378708-13378727	MS.gene063670:CDS	30.0%
	TTGGTGAAGTATAATGACAA+AGG	+	chr5.3:13378905-13378924	MS.gene063670:CDS	30.0%
!	AATAGGGTCTCTTTTTAATG+GGG	+	chr5.3:13378544-13378563	MS.gene063670:CDS	30.0%
!	TGCCTTTGACTTAATCAAAA+GGG	+	chr5.3:13378619-13378638	MS.gene063670:CDS	30.0%
!	TTGCCTTTGACTTAATCAAA+AGG	+	chr5.3:13378618-13378637	MS.gene063670:CDS	30.0%
!	TTTTTAATGGGGCTATTCAT+TGG	+	chr5.3:13378555-13378574	MS.gene063670:CDS	30.0%
!!	TTCCCTTTTGATTAAGTCAA+AGG	-	chr5.3:13378624-13378643	None:intergenic	30.0%
!!!	ACTCTTGTTTTGTCTATTGA+CGG	+	chr5.3:13378806-13378825	MS.gene063670:CDS	30.0%
!!!	CCACTTTTTGTAGAACATAT+AGG	-	chr5.3:13378854-13378873	None:intergenic	30.0%
!!!	TATTTTAGGGTAATCAGTAG+AGG	-	chr5.3:13378525-13378544	None:intergenic	30.0%
	AGTCAATATCAAATGGGAGA+GGG	-	chr5.3:13378658-13378677	None:intergenic	35.0%
	CAGTAGAGGAATTGGTATAA+GGG	-	chr5.3:13378511-13378530	None:intergenic	35.0%
	GATATCATTGGAACAGAAGA+TGG	+	chr5.3:13378875-13378894	MS.gene063670:CDS	35.0%
	GTCAACAGATGATTACTTCT+TGG	+	chr5.3:13378388-13378407	MS.gene063670:CDS	35.0%
	TAGTCAATATCAAATGGGAG+AGG	-	chr5.3:13378659-13378678	None:intergenic	35.0%
	TATAGGGGAAAATAGCTTAG+TGG	-	chr5.3:13378837-13378856	None:intergenic	35.0%
	TCAGTAGAGGAATTGGTATA+AGG	-	chr5.3:13378512-13378531	None:intergenic	35.0%
	TCGTCATGATCATTTACGAA+AGG	+	chr5.3:13378586-13378605	MS.gene063670:CDS	35.0%
	TCTCATTGAGAGCTAATACA+TGG	+	chr5.3:13378462-13378481	MS.gene063670:CDS	35.0%
!	ATTTCTCAGTATATGGGCTA+TGG	+	chr5.3:13378715-13378734	MS.gene063670:CDS	35.0%
	AACAGAAGATGGATGGAGAT+TGG	+	chr5.3:13378886-13378905	MS.gene063670:CDS	40.0%
	AAGCTACAACTTGTGATGTG+TGG	+	chr5.3:13378681-13378700	MS.gene063670:CDS	40.0%
	AATACGAAGTGCATTCGTCT+TGG	+	chr5.3:13378777-13378796	MS.gene063670:CDS	40.0%
	ACTTGTGATGTGTGGGTATT+TGG	+	chr5.3:13378689-13378708	MS.gene063670:CDS	40.0%
	AGCTACAACTTGTGATGTGT+GGG	+	chr5.3:13378682-13378701	MS.gene063670:CDS	40.0%
	AGGGTAATCAGTAGAGGAAT+TGG	-	chr5.3:13378519-13378538	None:intergenic	40.0%
	TCATTGGAACAGAAGATGGA+TGG	+	chr5.3:13378879-13378898	MS.gene063670:CDS	40.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.3	gene	13378365	13378943	13378365	ID=MS.gene063670
chr5.3	mRNA	13378365	13378943	13378365	ID=MS.gene063670.t1;Parent=MS.gene063670
chr5.3	exon	13378365	13378943	13378365	ID=MS.gene063670.t1.exon1;Parent=MS.gene063670.t1
chr5.3	CDS	13378365	13378943	13378365	ID=cds.MS.gene063670.t1;Parent=MS.gene063670.t1

Gene Sequence

>MS.gene063670

ATGGTTTTGGGTACGTACGAGGAGTCAACAGATGATTACTTCTTGGTCACAATTTCTCAAGACCCCAAATTAGCTAATACTAAGCATTTGGAGATTTTCTCATTGAGAGCTAATACATGGAAAGAAATTGAGGGTATTCACTGCCCTTATACCAATTCCTCTACTGATTACCCTAAAATAATAGGGTCTCTTTTTAATGGGGCTATTCATTGGTTCGCTTTTCGTCATGATCATTTACGAAAGGATCTTATTCTTGCCTTTGACTTAATCAAAAGGGAACTTTTTGAGATCCCTCTCCCATTTGATATTGACTATGAAGCTACAACTTGTGATGTGTGGGTATTTGGAGAATTTCTCAGTATATGGGCTATGGATTATGCTAATGATACAGTTGAAATATGGGTGATGAAAGAATACGAAGTGCATTCGTCTTGGACGAAAACTCTTGTTTTGTCTATTGACGGCATTTCCACTAAGCTATTTTCCCCTATATGTTCTACAAAAAGTGGTGATATCATTGGAACAGAAGATGGATGGAGATTGGTGAAGTATAATGACAAAGGACAGTTGATAGAGTGA

Protein sequence

>MS.gene063670.t1

MVLGTYEESTDDYFLVTISQDPKLANTKHLEIFSLRANTWKEIEGIHCPYTNSSTDYPKIIGSLFNGAIHWFAFRHDHLRKDLILAFDLIKRELFEIPLPFDIDYEATTCDVWVFGEFLSIWAMDYANDTVEIWVMKEYEVHSSWTKTLVLSIDGISTKLFSPICSTKSGDIIGTEDGWRLVKYNDKGQLIE