AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024009


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024009.t1 MTR_8g102520 63.780 381 78 4 1 380 1 322 2.90e-166 468
MS.gene024009.t1 MTR_7g079400 58.065 310 107 5 76 380 46 337 9.65e-116 340
MS.gene024009.t1 MTR_7g079370 50.857 350 153 7 37 378 16 354 1.62e-106 317
MS.gene024009.t1 MTR_2g048580 48.608 395 135 12 1 380 1 342 1.51e-104 312
MS.gene024009.t1 MTR_6g060650 44.307 404 168 14 1 379 1 372 5.68e-83 258
MS.gene024009.t1 MTR_5g070080 43.069 404 173 16 3 376 5 381 1.31e-82 257
MS.gene024009.t1 MTR_8g098830 71.176 170 48 1 185 354 32 200 1.03e-81 249
MS.gene024009.t1 MTR_1g055135 42.748 393 187 10 2 380 7 375 1.22e-81 254
MS.gene024009.t1 MTR_5g070088 40.347 404 187 13 3 376 2 381 1.72e-80 252
MS.gene024009.t1 MTR_4g109270 43.797 395 176 16 1 380 1 364 3.93e-80 250
MS.gene024009.t1 MTR_3g103020 43.333 390 177 13 6 380 18 378 1.42e-79 249
MS.gene024009.t1 MTR_5g070130 42.821 390 188 13 1 376 4 372 4.36e-79 248
MS.gene024009.t1 MTR_4g109280 42.894 387 186 11 1 380 1 359 5.48e-79 247
MS.gene024009.t1 MTR_3g034180 42.424 396 184 13 3 379 118 488 1.01e-78 250
MS.gene024009.t1 MTR_4g117720 42.602 392 147 15 1 376 44 373 1.18e-78 247
MS.gene024009.t1 MTR_4g094365 41.604 399 179 14 1 380 1 364 3.53e-78 245
MS.gene024009.t1 MTR_4g116330 42.967 391 182 13 3 380 18 380 1.36e-77 244
MS.gene024009.t1 MTR_4g023080 40.625 384 177 12 2 373 3 347 2.25e-76 240
MS.gene024009.t1 MTR_3g034160 42.199 391 182 14 3 374 4 369 6.24e-75 237
MS.gene024009.t1 MTR_4g117850 41.602 387 183 15 4 376 19 376 2.49e-74 236
MS.gene024009.t1 MTR_4g117780 41.667 384 186 13 8 380 11 367 3.05e-74 235
MS.gene024009.t1 MTR_5g097210 40.731 383 191 12 2 375 3 358 1.36e-73 233
MS.gene024009.t1 MTR_4g117770 41.432 391 194 11 1 380 1 367 2.57e-73 233
MS.gene024009.t1 MTR_4g117810 41.432 391 194 11 1 380 1 367 2.57e-73 233
MS.gene024009.t1 MTR_7g079420 48.951 286 94 7 101 380 905 1144 3.49e-73 247
MS.gene024009.t1 MTR_4g118380 42.513 374 172 10 1 350 1 355 4.22e-73 232
MS.gene024009.t1 MTR_8g433040 41.538 390 178 16 3 380 13 364 4.69e-73 232
MS.gene024009.t1 MTR_8g032380 41.538 390 178 16 3 380 13 364 4.69e-73 232
MS.gene024009.t1 MTR_4g021785 40.722 388 186 12 2 380 3 355 8.83e-73 231
MS.gene024009.t1 MTR_3g034130 41.240 371 176 13 2 353 3 350 2.32e-72 230
MS.gene024009.t1 MTR_4g117750 42.820 383 181 10 8 379 3 358 1.42e-71 232
MS.gene024009.t1 MTR_4g117750 40.909 110 52 4 273 374 373 477 3.39e-12 68.2
MS.gene024009.t1 MTR_4g023070 39.796 392 179 14 8 373 3 363 3.87e-71 227
MS.gene024009.t1 MTR_4g023090 38.875 391 189 13 7 374 15 378 8.01e-71 227
MS.gene024009.t1 MTR_4g023120 39.541 392 180 14 8 373 3 363 9.49e-70 223
MS.gene024009.t1 MTR_8g032390 39.844 384 174 13 3 376 35 371 1.04e-69 223
MS.gene024009.t1 MTR_4g122850 39.257 377 190 15 19 380 12 364 2.07e-69 223
MS.gene024009.t1 MTR_4g023440 39.791 382 156 12 7 380 17 332 5.62e-68 218
MS.gene024009.t1 MTR_4g023190 39.535 387 183 15 2 374 4 353 1.98e-64 209
MS.gene024009.t1 MTR_8g013010 46.831 284 118 11 6 282 52 309 5.46e-64 207
MS.gene024009.t1 MTR_4g023130 37.234 376 160 11 2 373 3 306 1.34e-63 206
MS.gene024009.t1 MTR_7g079450 70.714 140 37 1 241 380 2 137 2.06e-63 199
MS.gene024009.t1 MTR_4g116330 39.642 391 156 14 3 380 18 341 1.14e-62 204
MS.gene024009.t1 MTR_4g023380 36.386 404 184 13 2 374 10 371 2.15e-61 202
MS.gene024009.t1 MTR_1g055195 42.949 312 136 11 78 380 200 478 9.84e-60 201
MS.gene024009.t1 MTR_4g023150 37.789 389 188 15 2 374 4 354 1.19e-59 197
MS.gene024009.t1 MTR_4g023200 36.585 369 180 14 22 374 24 354 2.70e-56 188
MS.gene024009.t1 MTR_4g121580 37.173 382 174 15 5 370 8 339 3.18e-53 181
MS.gene024009.t1 MTR_4g118400 38.214 280 114 10 100 374 69 294 1.80e-47 163
MS.gene024009.t1 MTR_4g118370 40.909 264 113 7 114 375 33 255 1.62e-45 157
MS.gene024009.t1 MTR_4g117870 34.688 320 145 9 66 380 7 267 1.90e-44 154
MS.gene024009.t1 MTR_4g116340 42.041 245 105 10 7 246 35 247 3.33e-44 153
MS.gene024009.t1 MTR_1g055175 45.178 197 100 6 188 380 9 201 4.11e-42 146
MS.gene024009.t1 MTR_8g433030 44.978 229 110 9 154 376 120 338 5.08e-42 150
MS.gene024009.t1 MTR_8g433030 43.182 88 48 2 3 89 35 121 4.72e-12 67.0
MS.gene024009.t1 MTR_5g069120 49.468 188 77 7 18 197 1 178 6.78e-42 145
MS.gene024009.t1 MTR_4g116320 40.092 217 118 7 163 374 43 252 3.35e-37 135
MS.gene024009.t1 MTR_4g117530 35.094 265 111 9 119 380 47 253 1.09e-35 131
MS.gene024009.t1 MTR_1g055250 40.094 212 118 6 158 367 49 253 1.69e-35 132
MS.gene024009.t1 MTR_4g107820 30.890 382 215 16 8 372 36 385 5.78e-35 132
MS.gene024009.t1 MTR_4g107780 30.890 382 215 16 8 372 36 385 5.78e-35 132
MS.gene024009.t1 MTR_4g107820 30.890 382 215 16 8 372 36 385 6.76e-35 133
MS.gene024009.t1 MTR_4g107780 30.890 382 215 16 8 372 36 385 7.11e-35 133
MS.gene024009.t1 MTR_4g133170 31.343 335 193 15 8 330 4 313 7.76e-35 132
MS.gene024009.t1 MTR_8g040935 41.000 200 106 7 188 380 14 208 1.49e-34 127
MS.gene024009.t1 MTR_1g055165 45.783 166 82 6 219 380 157 318 3.97e-33 126
MS.gene024009.t1 MTR_1g055165 38.068 176 97 6 7 172 9 182 4.11e-25 104
MS.gene024009.t1 MTR_2g021150 31.503 346 183 15 8 330 14 328 1.63e-32 125
MS.gene024009.t1 MTR_4g114700 33.333 276 112 7 102 371 9 218 1.03e-30 117
MS.gene024009.t1 MTR_4g117430 42.857 161 63 6 102 262 3 134 1.34e-30 114
MS.gene024009.t1 MTR_6g065980 31.579 304 166 12 8 306 16 282 1.98e-30 119
MS.gene024009.t1 MTR_3g007330 29.467 319 182 10 8 316 48 333 2.17e-30 120
MS.gene024009.t1 MTR_4g055060 30.462 325 163 14 8 306 30 317 6.82e-30 119
MS.gene024009.t1 MTR_3g013740 30.473 338 179 11 5 316 41 348 7.91e-30 119
MS.gene024009.t1 MTR_6g463430 39.901 203 107 8 178 374 3 196 1.28e-29 113
MS.gene024009.t1 MTR_3g036290 28.084 381 212 16 8 372 22 356 4.49e-29 116
MS.gene024009.t1 MTR_3g006670 31.250 320 163 13 8 306 49 332 8.43e-29 116
MS.gene024009.t1 MTR_3g009240 31.410 312 166 14 8 306 36 312 1.28e-28 115
MS.gene024009.t1 MTR_5g007610 31.193 327 188 15 8 319 41 345 2.39e-28 115
MS.gene024009.t1 MTR_3g011100 30.395 329 177 12 8 316 235 531 3.41e-28 116
MS.gene024009.t1 MTR_7g407070 29.480 346 191 12 4 318 22 345 3.58e-28 114
MS.gene024009.t1 MTR_1g094210 27.979 386 213 16 8 372 57 398 5.37e-28 114
MS.gene024009.t1 MTR_3g009310 30.449 312 173 12 8 306 42 322 1.01e-27 113
MS.gene024009.t1 MTR_1g097560 29.814 322 179 12 5 318 33 315 1.30e-27 112
MS.gene024009.t1 MTR_7g070880 27.913 369 206 11 8 330 21 375 3.57e-27 112
MS.gene024009.t1 MTR_3g007430 29.467 319 180 12 11 315 46 333 6.94e-27 110
MS.gene024009.t1 MTR_1g094210 27.901 362 198 15 8 348 57 376 8.63e-27 110
MS.gene024009.t1 MTR_6g021880 29.042 334 175 14 19 323 31 331 1.90e-26 109
MS.gene024009.t1 MTR_7g070830 26.902 368 211 9 8 330 21 375 2.52e-26 109
MS.gene024009.t1 MTR_4g108820 32.051 312 134 16 8 308 42 286 2.56e-26 107
MS.gene024009.t1 MTR_5g011200 29.114 316 180 15 8 308 17 303 6.07e-26 107
MS.gene024009.t1 MTR_4g118360 45.000 120 65 1 256 374 1 120 6.82e-26 101
MS.gene024009.t1 MTR_3g010870 30.097 309 172 12 8 306 37 311 7.06e-26 107
MS.gene024009.t1 MTR_4g109290 39.306 173 51 6 7 172 8 133 8.13e-26 103
MS.gene024009.t1 MTR_5g057790 28.133 391 212 17 8 372 46 393 1.05e-25 107
MS.gene024009.t1 MTR_3g010590 27.885 312 168 11 8 306 39 306 1.54e-25 106
MS.gene024009.t1 MTR_2g029990 27.110 391 218 14 9 372 52 402 2.53e-25 106
MS.gene024009.t1 MTR_2g078900 28.662 314 172 12 8 306 33 309 3.03e-25 105
MS.gene024009.t1 MTR_3g023930 28.431 306 167 10 8 306 34 294 5.31e-25 105
MS.gene024009.t1 MTR_8g467140 29.712 313 175 14 8 306 32 313 6.56e-25 103
MS.gene024009.t1 MTR_7g117720 37.089 213 97 6 2 209 4 184 1.05e-24 102
MS.gene024009.t1 MTR_7g117720 38.017 121 65 5 263 375 154 272 2.53e-13 70.1
MS.gene024009.t1 MTR_2g024110 28.286 350 208 16 8 340 4 327 1.07e-24 104
MS.gene024009.t1 MTR_5g057710 28.349 321 186 13 8 315 46 335 1.23e-24 104
MS.gene024009.t1 MTR_7g055870 25.641 429 238 13 8 372 13 424 1.64e-24 104
MS.gene024009.t1 MTR_1g068875 26.727 333 212 12 8 330 4 314 1.89e-24 103
MS.gene024009.t1 MTR_2g426020 27.543 403 219 14 8 377 6 368 1.91e-24 103
MS.gene024009.t1 MTR_1g055070 30.435 276 153 11 6 260 47 304 1.98e-24 103
MS.gene024009.t1 MTR_3g436150 29.598 348 178 14 4 316 22 337 2.15e-24 103
MS.gene024009.t1 MTR_3g007270 27.950 322 180 12 8 306 47 339 2.20e-24 103
MS.gene024009.t1 MTR_5g022420 29.022 317 174 14 8 313 27 303 2.35e-24 103
MS.gene024009.t1 MTR_0064s0160 26.879 346 193 13 7 316 41 362 3.03e-24 103
MS.gene024009.t1 MTR_2g021190 28.834 326 191 11 8 320 21 318 4.06e-24 102
MS.gene024009.t1 MTR_0760s0010 29.154 319 170 12 13 318 52 327 5.09e-24 102
MS.gene024009.t1 MTR_3g014540 29.275 386 215 15 8 372 29 377 5.80e-24 102
MS.gene024009.t1 MTR_1g068835 25.424 354 218 12 8 348 4 324 6.97e-24 102
MS.gene024009.t1 MTR_2g426060 28.319 339 188 14 8 312 6 323 7.17e-24 102
MS.gene024009.t1 MTR_3g007360 29.448 326 182 13 11 320 55 348 9.13e-24 102
MS.gene024009.t1 MTR_7g070440 29.394 330 177 16 10 313 9 308 9.84e-24 101
MS.gene024009.t1 MTR_3g010390 28.097 331 174 14 8 306 33 331 1.29e-23 101
MS.gene024009.t1 MTR_2g028110 29.154 319 177 12 8 306 4 293 1.33e-23 101
MS.gene024009.t1 MTR_0044s0300 29.338 317 167 15 8 306 38 315 1.89e-23 100
MS.gene024009.t1 MTR_2g046920 28.205 312 183 12 8 308 24 305 1.96e-23 100
MS.gene024009.t1 MTR_7g013590 31.111 315 157 14 15 306 43 320 2.34e-23 100
MS.gene024009.t1 MTR_5g057690 27.487 382 216 17 8 372 46 383 3.71e-23 100
MS.gene024009.t1 MTR_6g017280 25.762 361 205 12 8 330 9 344 5.03e-23 99.8
MS.gene024009.t1 MTR_3g007410 29.141 326 183 13 11 320 55 348 6.02e-23 99.8
MS.gene024009.t1 MTR_6g004660 27.246 334 191 14 8 318 16 320 6.11e-23 99.4
MS.gene024009.t1 MTR_1g056710 26.623 308 194 11 8 308 34 316 6.53e-23 99.4
MS.gene024009.t1 MTR_1g054575 29.545 308 172 12 8 304 52 325 8.25e-23 100
MS.gene024009.t1 MTR_2g028160 26.891 357 213 11 5 330 2 341 9.94e-23 99.4
MS.gene024009.t1 MTR_3g024040 26.129 310 186 10 14 316 37 310 1.42e-22 98.2
MS.gene024009.t1 MTR_7g062100 30.321 343 162 15 8 313 24 326 1.55e-22 98.6
MS.gene024009.t1 MTR_3g014570 29.464 336 167 14 8 316 29 321 1.60e-22 98.2
MS.gene024009.t1 MTR_2g055970 26.098 387 233 15 5 372 208 560 1.66e-22 99.4
MS.gene024009.t1 MTR_1g050542 28.053 303 181 10 8 304 58 329 2.58e-22 97.8
MS.gene024009.t1 MTR_7g055930 25.059 427 243 13 8 372 13 424 2.67e-22 98.2
MS.gene024009.t1 MTR_8g062660 26.702 382 224 14 8 373 22 363 3.30e-22 99.0
MS.gene024009.t1 MTR_2g028140 26.786 336 192 11 5 306 2 317 3.33e-22 97.8
MS.gene024009.t1 MTR_2g426070 27.900 319 193 9 9 306 7 309 4.43e-22 97.1
MS.gene024009.t1 MTR_0115s0020 26.429 420 229 17 7 376 9 398 4.51e-22 97.1
MS.gene024009.t1 MTR_4g061340 27.523 327 186 12 8 315 26 320 5.71e-22 96.7
MS.gene024009.t1 MTR_5g069930 26.807 332 192 12 6 313 4 308 7.34e-22 96.3
MS.gene024009.t1 MTR_3g010970 27.885 312 163 12 11 306 51 316 7.67e-22 96.3
MS.gene024009.t1 MTR_3g013770 31.077 325 160 15 8 306 33 319 8.13e-22 96.3
MS.gene024009.t1 MTR_7g056820 25.729 377 211 14 8 351 7 347 8.50e-22 96.3
MS.gene024009.t1 MTR_2g046900 27.103 321 183 13 8 308 28 317 8.86e-22 96.3
MS.gene024009.t1 MTR_3g036430 26.667 300 169 10 8 306 20 269 9.09e-22 95.5
MS.gene024009.t1 MTR_2g025420 25.250 400 234 15 8 370 6 377 1.02e-21 96.3
MS.gene024009.t1 MTR_3g010520 28.710 310 162 13 8 306 25 286 1.44e-21 95.1
MS.gene024009.t1 MTR_3g030330 28.391 317 165 12 8 306 20 292 1.55e-21 95.1
MS.gene024009.t1 MTR_1g054725 25.510 392 231 17 7 372 19 375 1.60e-21 95.1
MS.gene024009.t1 MTR_1g097330 29.283 321 162 15 8 306 16 293 1.83e-21 95.5
MS.gene024009.t1 MTR_7g056503 27.217 327 199 12 8 313 21 329 1.89e-21 95.5
MS.gene024009.t1 MTR_2g028130 26.796 362 205 14 5 330 2 339 2.45e-21 95.1
MS.gene024009.t1 MTR_5g069760 26.284 331 194 12 4 313 2 303 2.82e-21 94.4
MS.gene024009.t1 MTR_0267s0050 27.348 362 202 14 11 335 9 346 3.09e-21 94.7
MS.gene024009.t1 MTR_3g009260 28.526 312 184 10 8 312 41 320 3.21e-21 94.4
MS.gene024009.t1 MTR_2g426090 28.349 321 191 14 6 306 5 306 3.39e-21 94.7
MS.gene024009.t1 MTR_5g009060 30.286 350 157 20 8 306 25 338 3.47e-21 94.7
MS.gene024009.t1 MTR_6g007135 28.840 319 179 14 8 306 26 316 4.94e-21 94.0
MS.gene024009.t1 MTR_4g129190 27.139 339 189 12 6 313 4 315 6.39e-21 93.6
MS.gene024009.t1 MTR_2g104340 25.124 402 244 11 7 373 13 392 6.60e-21 93.6
MS.gene024009.t1 MTR_5g057020 26.708 322 181 13 8 318 46 323 7.02e-21 93.2
MS.gene024009.t1 MTR_1g115160 29.503 322 162 15 6 308 20 295 7.60e-21 93.2
MS.gene024009.t1 MTR_3g030240 24.601 313 174 10 8 306 40 304 7.77e-21 93.2
MS.gene024009.t1 MTR_3g083010 27.348 362 202 15 8 330 6 345 8.62e-21 93.6
MS.gene024009.t1 MTR_1g068860 27.070 314 190 10 6 306 2 289 8.88e-21 93.2
MS.gene024009.t1 MTR_0242s0060 27.035 344 192 14 6 313 7 327 1.07e-20 93.2
MS.gene024009.t1 MTR_0242s0040 27.035 344 192 14 6 313 7 327 1.07e-20 93.2
MS.gene024009.t1 MTR_2g026010 28.235 340 209 13 6 330 2 321 1.22e-20 92.8
MS.gene024009.t1 MTR_2g046830 27.687 307 185 9 11 308 28 306 1.23e-20 92.8
MS.gene024009.t1 MTR_0667s0010 26.543 324 186 12 8 306 6 302 1.27e-20 93.2
MS.gene024009.t1 MTR_0128s0020 27.697 343 177 12 6 313 16 322 1.41e-20 92.8
MS.gene024009.t1 MTR_2g425980 28.261 322 190 12 8 306 5 308 1.60e-20 92.8
MS.gene024009.t1 MTR_1g097490 28.889 315 180 13 5 308 46 327 1.95e-20 92.4
MS.gene024009.t1 MTR_5g069390 26.253 419 235 18 1 371 19 411 2.15e-20 92.8
MS.gene024009.t1 MTR_3g010920 27.707 314 161 13 8 306 44 306 2.52e-20 92.0
MS.gene024009.t1 MTR_2g461450 28.616 318 182 12 6 313 16 298 2.70e-20 91.7
MS.gene024009.t1 MTR_2g046800 28.161 348 167 16 8 308 14 325 3.76e-20 91.7
MS.gene024009.t1 MTR_2g031720 26.053 380 227 14 8 370 6 348 5.59e-20 90.9
MS.gene024009.t1 MTR_7g007300 29.231 325 163 15 8 312 103 380 6.84e-20 91.3
MS.gene024009.t1 MTR_3g083640 27.010 311 180 10 8 306 55 330 8.67e-20 90.5
MS.gene024009.t1 MTR_3g013950 26.359 368 211 13 5 335 4 348 1.01e-19 90.1
MS.gene024009.t1 MTR_6g053260 27.385 325 197 11 8 320 337 634 1.03e-19 91.3
MS.gene024009.t1 MTR_4g031770 27.019 322 186 13 7 312 3 291 1.11e-19 89.7
MS.gene024009.t1 MTR_5g046300 26.708 322 179 15 8 312 4 285 1.16e-19 89.7
MS.gene024009.t1 MTR_5g046290 26.708 322 179 15 8 312 4 285 1.16e-19 89.7
MS.gene024009.t1 MTR_7g028660 27.003 337 189 12 6 313 9 317 1.21e-19 89.7
MS.gene024009.t1 MTR_1g442850 29.664 327 180 15 10 312 7 307 1.32e-19 89.7
MS.gene024009.t1 MTR_2g021155 26.557 305 189 9 11 306 39 317 1.64e-19 90.9
MS.gene024009.t1 MTR_7g055977 28.070 342 174 15 6 313 5 308 1.79e-19 89.4
MS.gene024009.t1 MTR_2g078850 27.742 310 177 12 11 306 33 309 1.93e-19 89.4
MS.gene024009.t1 MTR_8g101580 26.603 312 190 11 8 308 45 328 2.71e-19 89.0
MS.gene024009.t1 MTR_7g066030 25.208 361 225 12 1 330 14 360 2.86e-19 89.0
MS.gene024009.t1 MTR_7g077970 27.429 350 191 14 8 317 7 333 3.33e-19 89.0
MS.gene024009.t1 MTR_3g030310 27.778 324 171 14 8 306 21 306 3.67e-19 88.6
MS.gene024009.t1 MTR_2g031680 24.691 324 178 12 8 306 6 288 5.14e-19 88.2
MS.gene024009.t1 MTR_7g016930 26.567 335 178 14 2 307 10 305 6.48e-19 87.0
MS.gene024009.t1 MTR_4g030830 24.119 369 206 12 8 330 9 349 7.34e-19 87.8
MS.gene024009.t1 MTR_6g034720 42.105 152 56 6 125 270 53 178 7.81e-19 84.7
MS.gene024009.t1 MTR_0097s0030 28.415 366 182 14 5 330 11 336 9.58e-19 87.4
MS.gene024009.t1 MTR_2g047240 28.415 366 182 14 5 330 11 336 9.58e-19 87.4
MS.gene024009.t1 MTR_0128s0070 28.235 340 178 14 6 313 20 325 9.86e-19 87.4
MS.gene024009.t1 MTR_3g030250 26.959 319 164 14 8 306 37 306 1.12e-18 87.0
MS.gene024009.t1 MTR_7g445890 27.273 363 189 12 6 330 14 339 1.17e-18 87.0
MS.gene024009.t1 MTR_3g036335 24.773 331 188 12 8 316 41 332 1.26e-18 87.0
MS.gene024009.t1 MTR_2g021252 26.667 315 164 11 11 306 50 316 1.63e-18 86.7
MS.gene024009.t1 MTR_7g061060 25.401 374 190 15 5 330 10 342 1.71e-18 86.7
MS.gene024009.t1 MTR_3g010870 30.705 241 126 10 8 240 37 244 2.23e-18 85.5
MS.gene024009.t1 MTR_7g077070 26.702 382 211 17 1 330 9 373 2.55e-18 86.3
MS.gene024009.t1 MTR_7g066010 24.722 360 196 10 1 330 14 328 4.17e-18 85.1
MS.gene024009.t1 MTR_4g023430 50.633 79 36 1 3 78 36 114 4.34e-18 82.8
MS.gene024009.t1 MTR_7g066000 26.543 324 207 10 8 313 25 335 4.61e-18 85.5
MS.gene024009.t1 MTR_7g017040 24.574 411 235 16 7 373 15 394 5.23e-18 85.1
MS.gene024009.t1 MTR_6g027910 27.889 398 216 21 11 372 12 374 5.65e-18 85.1
MS.gene024009.t1 MTR_5g023000 44.681 94 49 2 289 380 7 99 6.64e-18 78.6
MS.gene024009.t1 MTR_7g066100 25.872 344 197 12 5 313 8 328 7.34e-18 84.7
MS.gene024009.t1 MTR_7g055987 27.439 328 176 10 11 313 23 313 7.66e-18 84.3
MS.gene024009.t1 MTR_2g047832 25.076 327 194 10 8 308 29 330 7.74e-18 84.7
MS.gene024009.t1 MTR_3g010620 25.879 313 165 13 11 306 39 301 7.88e-18 84.7
MS.gene024009.t1 MTR_7g078040 25.862 348 204 11 6 313 7 340 7.98e-18 85.1
MS.gene024009.t1 MTR_2g021210 27.124 306 183 11 8 306 84 356 1.04e-17 84.7
MS.gene024009.t1 MTR_7g062060 26.239 343 197 13 8 313 12 335 1.07e-17 84.3
MS.gene024009.t1 MTR_6g086825 26.603 421 229 22 7 377 69 459 1.12e-17 84.7
MS.gene024009.t1 MTR_3g006570 27.707 314 179 15 8 306 21 301 1.17e-17 84.0
MS.gene024009.t1 MTR_3g011060 24.699 332 178 11 8 306 28 320 1.22e-17 84.0
MS.gene024009.t1 MTR_3g024150 25.077 323 167 12 11 306 38 312 1.25e-17 84.0
MS.gene024009.t1 MTR_1g088120 27.729 339 186 11 11 313 13 328 1.33e-17 84.3
MS.gene024009.t1 MTR_7g445750 27.414 321 202 12 4 301 19 331 1.48e-17 83.2
MS.gene024009.t1 MTR_4g080200 22.129 357 232 11 6 349 1 324 1.72e-17 83.2
MS.gene024009.t1 MTR_6g053240 24.545 330 205 11 8 320 28 330 2.62e-17 83.2
MS.gene024009.t1 MTR_7g066850 25.600 375 194 16 6 330 21 360 2.71e-17 83.6
MS.gene024009.t1 MTR_4g033495 26.957 345 177 18 8 313 27 335 3.25e-17 83.2
MS.gene024009.t1 MTR_2g047892 26.844 339 187 12 6 313 20 328 3.87e-17 82.8
MS.gene024009.t1 MTR_8g099460 25.208 361 223 13 5 347 2 333 4.59e-17 82.4
MS.gene024009.t1 MTR_1g061330 24.627 402 232 15 8 380 4 363 4.59e-17 82.4
MS.gene024009.t1 MTR_0054s0090 25.420 417 248 18 2 377 11 405 5.71e-17 82.4
MS.gene024009.t1 MTR_7g060940 28.169 355 170 16 1 313 15 326 5.84e-17 82.0
MS.gene024009.t1 MTR_5g046260 26.299 308 168 13 8 312 4 255 6.43e-17 80.9
MS.gene024009.t1 MTR_0054s0100 25.532 423 242 20 2 377 11 407 9.17e-17 81.6
MS.gene024009.t1 MTR_3g006530 28.037 321 173 15 8 306 40 324 1.22e-16 81.3
MS.gene024009.t1 MTR_2g031640 26.101 318 184 14 8 306 6 291 1.76e-16 80.5
MS.gene024009.t1 MTR_5g037680 25.193 389 214 16 1 350 1 351 1.84e-16 80.9
MS.gene024009.t1 MTR_8g066440 25.770 357 206 11 9 328 24 358 1.86e-16 80.5
MS.gene024009.t1 MTR_7g061090 26.000 350 186 15 6 313 20 338 1.99e-16 80.5
MS.gene024009.t1 MTR_3g011650 30.568 229 125 8 11 233 82 282 2.53e-16 79.0
MS.gene024009.t1 MTR_2g047200 27.374 358 163 17 6 313 18 328 2.86e-16 80.1
MS.gene024009.t1 MTR_5g008530 61.404 57 21 1 5 60 15 71 2.90e-16 73.2
MS.gene024009.t1 MTR_3g010430 27.500 320 174 12 8 306 36 318 3.45e-16 80.1
MS.gene024009.t1 MTR_2g043410 26.989 352 165 13 11 313 25 333 3.84e-16 79.7
MS.gene024009.t1 MTR_7g050480 26.685 356 174 18 1 313 15 326 4.36e-16 79.3
MS.gene024009.t1 MTR_2g021800 24.362 431 239 15 2 373 10 412 4.94e-16 79.3
MS.gene024009.t1 MTR_7g050520 27.042 355 174 17 1 313 15 326 5.05e-16 79.3
MS.gene024009.t1 MTR_2g033410 25.902 305 186 10 8 301 9 284 5.10e-16 79.0
MS.gene024009.t1 MTR_3g072470 26.611 357 164 17 11 313 22 334 6.51e-16 79.0
MS.gene024009.t1 MTR_6g007150 28.302 212 115 8 112 312 90 275 7.43e-16 78.2
MS.gene024009.t1 MTR_5g096710 26.801 347 185 11 5 317 20 331 7.91e-16 79.0
MS.gene024009.t1 MTR_4g030090 26.946 334 177 14 8 306 14 315 8.02e-16 78.6
MS.gene024009.t1 MTR_1g112930 25.879 313 188 12 4 304 18 298 8.30e-16 78.6
MS.gene024009.t1 MTR_2g021770 25.187 401 234 14 19 373 23 403 9.81e-16 78.6
MS.gene024009.t1 MTR_6g055210 27.052 329 186 12 8 304 22 328 1.00e-15 78.6
MS.gene024009.t1 MTR_5g059430 23.858 394 227 12 1 342 19 391 1.01e-15 78.6
MS.gene024009.t1 MTR_5g096630 25.797 345 186 15 6 305 16 335 1.08e-15 78.6
MS.gene024009.t1 MTR_4g030980 24.324 370 188 11 8 313 15 356 1.46e-15 78.2
MS.gene024009.t1 MTR_3g009250 30.303 231 128 7 8 233 41 243 1.52e-15 75.9
MS.gene024009.t1 MTR_8g046310 24.619 394 238 14 7 374 15 375 1.63e-15 77.8
MS.gene024009.t1 MTR_5g057643 28.085 235 123 10 8 222 46 254 1.71e-15 76.3
MS.gene024009.t1 MTR_7g091630 25.146 342 199 11 5 313 29 346 2.66e-15 77.4
MS.gene024009.t1 MTR_7g056760 25.298 336 199 11 6 311 21 334 2.85e-15 77.0
MS.gene024009.t1 MTR_6g048120 24.731 372 214 16 8 356 36 364 2.93e-15 77.0
MS.gene024009.t1 MTR_4g122860 31.683 202 88 11 192 380 156 320 3.20e-15 76.3
MS.gene024009.t1 MTR_4g102410 25.479 365 210 15 7 330 60 403 3.36e-15 77.0
MS.gene024009.t1 MTR_7g057270 26.549 339 193 15 8 313 26 341 3.43e-15 77.0
MS.gene024009.t1 MTR_3g006500 27.134 328 162 16 8 306 17 296 3.51e-15 76.6
MS.gene024009.t1 MTR_4g030110 26.871 294 158 10 2 263 24 292 4.13e-15 76.6
MS.gene024009.t1 MTR_5g048160 25.904 332 199 13 7 306 3 319 5.02e-15 76.3
MS.gene024009.t1 MTR_5g056020 26.211 351 200 13 4 312 13 346 5.19e-15 76.6
MS.gene024009.t1 MTR_3g011120 26.542 373 202 17 5 342 11 346 5.33e-15 75.9
MS.gene024009.t1 MTR_8g041270 23.753 421 235 14 7 373 14 402 5.50e-15 76.3
MS.gene024009.t1 MTR_1g055055 27.607 326 171 14 6 316 24 299 6.99e-15 75.5
MS.gene024009.t1 MTR_6g090180 22.803 421 251 15 3 375 42 436 7.13e-15 76.3
MS.gene024009.t1 MTR_5g043160 25.581 387 227 16 10 347 52 426 7.74e-15 76.3
MS.gene024009.t1 MTR_5g068040 25.602 332 180 12 8 313 16 306 8.90e-15 75.5
MS.gene024009.t1 MTR_7g055830 23.645 406 207 12 8 372 13 356 1.09e-14 75.1
MS.gene024009.t1 MTR_2g024100 27.044 318 188 13 15 310 15 310 1.23e-14 75.1
MS.gene024009.t1 MTR_3g464500 24.129 373 197 12 4 328 23 357 1.32e-14 75.1
MS.gene024009.t1 MTR_0649s0020 25.075 335 196 12 8 313 11 319 1.44e-14 74.7
MS.gene024009.t1 MTR_0464s0020 25.926 351 192 13 6 313 21 346 1.46e-14 75.1
MS.gene024009.t1 MTR_4g024890 24.620 329 199 11 8 313 10 312 1.59e-14 74.7
MS.gene024009.t1 MTR_6g017305 27.347 245 130 9 113 330 15 238 1.62e-14 73.6
MS.gene024009.t1 MTR_7g061050 25.217 345 182 14 5 313 10 314 1.72e-14 74.7
MS.gene024009.t1 MTR_3g011020 24.214 318 200 10 8 317 28 312 1.82e-14 74.3
MS.gene024009.t1 MTR_7g078840 26.124 356 208 14 1 313 3 346 1.82e-14 74.7
MS.gene024009.t1 MTR_5g097680 25.701 428 245 16 3 373 12 423 1.93e-14 74.7
MS.gene024009.t1 MTR_5g022090 23.077 325 190 10 7 316 33 312 2.01e-14 74.7
MS.gene024009.t1 MTR_4g011660 27.424 361 179 17 5 313 16 345 2.06e-14 74.7
MS.gene024009.t1 MTR_4g013180 24.722 360 212 14 8 330 11 348 2.17e-14 74.7
MS.gene024009.t1 MTR_7g078860 23.873 377 213 10 2 330 3 353 2.23e-14 74.3
MS.gene024009.t1 MTR_0128s0010 25.846 325 189 11 8 306 21 319 2.28e-14 74.3
MS.gene024009.t1 MTR_2g010920 24.571 350 215 11 2 313 14 352 2.34e-14 74.3
MS.gene024009.t1 MTR_4g013185 24.859 354 189 12 11 313 13 340 4.01e-14 73.9
MS.gene024009.t1 MTR_7g067680 25.078 319 163 13 8 306 49 311 4.84e-14 73.2
MS.gene024009.t1 MTR_3g058440 28.846 260 137 12 8 248 35 265 5.24e-14 72.4
MS.gene024009.t1 MTR_4g028660 25.600 375 222 18 4 342 12 365 6.40e-14 73.2
MS.gene024009.t1 MTR_4g027450 25.600 375 222 18 4 342 12 365 6.40e-14 73.2
MS.gene024009.t1 MTR_3g437520 24.716 352 188 11 11 313 26 349 7.61e-14 73.2
MS.gene024009.t1 MTR_7g022600 27.221 349 195 13 5 313 20 349 7.69e-14 72.8
MS.gene024009.t1 MTR_4g030790 25.466 322 161 11 5 306 16 278 8.35e-14 72.4
MS.gene024009.t1 MTR_5g057040 30.270 185 85 8 8 173 46 205 8.43e-14 73.6
MS.gene024009.t1 MTR_7g060960 27.914 326 171 12 2 313 26 301 8.65e-14 72.4
MS.gene024009.t1 MTR_3g058480 27.046 281 141 11 8 260 39 283 9.66e-14 72.0
MS.gene024009.t1 MTR_4g006270 27.653 311 165 16 8 304 4 268 9.84e-14 72.4
MS.gene024009.t1 MTR_4g019990 25.862 348 180 10 8 312 6 318 9.88e-14 72.4
MS.gene024009.t1 MTR_8g063440 26.500 400 238 18 3 373 7 379 1.06e-13 72.4
MS.gene024009.t1 MTR_2g065860 25.946 370 219 13 3 344 7 349 1.13e-13 72.0
MS.gene024009.t1 MTR_3g058470 25.705 319 161 9 8 306 37 299 1.80e-13 71.6
MS.gene024009.t1 MTR_6g013270 27.744 328 170 18 8 308 29 316 2.11e-13 71.2
MS.gene024009.t1 MTR_2g022170 37.984 129 74 3 11 138 7 130 2.12e-13 67.0
MS.gene024009.t1 MTR_2g010900 23.975 317 192 12 26 313 1 297 2.47e-13 71.2
MS.gene024009.t1 MTR_1g068905 26.744 258 145 8 8 260 4 222 2.88e-13 70.5
MS.gene024009.t1 MTR_4g030760 23.926 326 196 9 3 313 68 356 2.95e-13 71.2
MS.gene024009.t1 MTR_7g052150 27.114 343 171 17 8 313 22 322 4.18e-13 70.5
MS.gene024009.t1 MTR_7g055850 29.730 222 119 7 8 201 13 225 5.11e-13 69.3
MS.gene024009.t1 MTR_8g012090 26.190 336 168 12 2 306 10 296 5.37e-13 69.7
MS.gene024009.t1 MTR_2g031700 26.641 259 151 10 8 257 6 234 5.47e-13 69.3
MS.gene024009.t1 MTR_2g021950 24.337 415 230 16 7 373 15 393 6.31e-13 70.1
MS.gene024009.t1 MTR_1g055200 41.000 100 39 3 99 197 6 86 6.99e-13 64.7
MS.gene024009.t1 MTR_7g056200 23.055 347 169 9 6 312 21 309 7.19e-13 69.7
MS.gene024009.t1 MTR_1g023400 25.210 357 209 19 14 348 9 329 8.13e-13 69.3
MS.gene024009.t1 MTR_4g055820 24.355 349 196 12 3 306 9 334 9.56e-13 69.3
MS.gene024009.t1 MTR_3g464470 22.802 364 210 10 4 328 3 334 1.16e-12 68.9
MS.gene024009.t1 MTR_6g016285 26.286 350 183 13 6 312 19 336 1.44e-12 68.9
MS.gene024009.t1 MTR_1g007410 23.596 356 208 12 2 317 16 347 1.46e-12 68.9
MS.gene024009.t1 MTR_7g052670 25.236 424 242 16 6 372 19 424 1.96e-12 68.6
MS.gene024009.t1 MTR_3g023940 24.534 322 181 11 8 306 34 316 2.04e-12 68.2
MS.gene024009.t1 MTR_3g030350 26.032 315 180 14 8 306 35 312 2.04e-12 68.6
MS.gene024009.t1 MTR_1g055375 24.540 326 196 12 7 312 3 298 2.13e-12 68.2
MS.gene024009.t1 MTR_2g078870 28.309 272 142 13 45 306 4 232 2.33e-12 67.8
MS.gene024009.t1 MTR_1g029650 23.684 342 191 14 8 313 8 315 2.87e-12 68.2
MS.gene024009.t1 MTR_2g043400 25.731 342 182 14 11 313 26 334 3.97e-12 67.8
MS.gene024009.t1 MTR_2g437110 24.129 402 241 14 6 372 20 392 5.27e-12 67.4
MS.gene024009.t1 MTR_7g050490 30.317 221 101 11 1 201 1 188 6.17e-12 64.3
MS.gene024009.t1 MTR_4g028750 25.959 339 198 15 5 309 13 332 6.66e-12 67.0
MS.gene024009.t1 MTR_1g115185 26.433 314 184 14 11 308 42 324 7.60e-12 66.6
MS.gene024009.t1 MTR_4g013175 25.831 391 197 16 6 330 8 371 9.07e-12 66.6
MS.gene024009.t1 MTR_3g083660 30.921 152 86 5 155 306 74 206 1.17e-11 65.1
MS.gene024009.t1 MTR_6g017295 25.830 271 140 11 96 328 40 287 1.26e-11 66.2
MS.gene024009.t1 MTR_1g071010 24.629 337 193 13 8 313 15 321 1.34e-11 65.9
MS.gene024009.t1 MTR_7g056797 24.926 337 199 10 5 311 20 332 1.73e-11 65.5
MS.gene024009.t1 MTR_7g017130 25.000 408 236 17 8 376 18 394 2.28e-11 65.1
MS.gene024009.t1 MTR_3g096250 27.010 311 145 11 8 306 47 287 2.30e-11 65.1
MS.gene024009.t1 MTR_1004s0010 27.615 239 124 11 86 318 102 297 3.48e-11 64.3
MS.gene024009.t1 MTR_0831s0010 25.515 388 198 21 2 342 44 387 3.64e-11 64.7
MS.gene024009.t1 MTR_7g061010 28.125 352 168 15 1 313 15 320 3.67e-11 64.7
MS.gene024009.t1 MTR_3g009300 26.688 311 166 13 11 314 37 292 3.72e-11 64.3
MS.gene024009.t1 MTR_7g056710 26.409 337 177 14 8 313 18 314 3.98e-11 64.3
MS.gene024009.t1 MTR_3g024130 25.954 262 150 12 63 312 23 252 5.09e-11 63.5
MS.gene024009.t1 MTR_6g034830 36.207 116 60 3 2 114 14 118 5.86e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024009.t1 AT4G12560 27.744 328 178 15 8 307 4 300 7.41e-22 96.7
MS.gene024009.t1 AT4G12560 27.744 328 178 15 8 307 4 300 7.41e-22 96.7
MS.gene024009.t1 AT4G12560 27.744 328 178 15 8 307 4 300 7.41e-22 96.7
MS.gene024009.t1 AT3G06240 27.594 424 214 19 5 372 33 419 2.67e-20 92.4
MS.gene024009.t1 AT5G49610 29.276 304 177 11 8 302 9 283 2.68e-20 91.7
MS.gene024009.t1 AT4G22390 27.744 328 189 15 9 317 5 303 6.82e-20 90.9
MS.gene024009.t1 AT4G22390 27.744 328 189 15 9 317 5 303 7.35e-20 90.9
MS.gene024009.t1 AT3G23880 28.025 314 187 12 7 308 13 299 1.46e-15 77.8
MS.gene024009.t1 AT4G21240 24.925 333 192 14 8 321 36 329 6.96e-15 76.3
MS.gene024009.t1 AT3G16590 30.392 306 167 18 6 296 3 277 3.65e-14 73.6
MS.gene024009.t1 AT1G33530 25.767 326 176 15 5 312 94 371 3.84e-14 73.9
MS.gene024009.t1 AT3G21410 25.357 280 176 12 2 278 32 281 4.16e-12 67.4
MS.gene024009.t1 AT5G62660 24.157 356 206 17 7 332 40 361 8.78e-12 66.6
MS.gene024009.t1 AT3G59610 26.667 300 171 12 8 297 8 268 4.54e-11 64.7
MS.gene024009.t1 AT3G08750 25.591 254 149 8 8 256 12 230 7.27e-11 63.5

Find 84 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATTGCCTATGATTTAA+AGG 0.152459 7.1:-24528585 MS.gene024009:CDS
TTATGATTTGTCGGTATTTC+GGG 0.165211 7.1:-24528501 MS.gene024009:CDS
TCGATTCTGATTTGCCTTAT+AGG 0.216443 7.1:-24528703 MS.gene024009:CDS
AGATGATTACATGGTAGTTT+TGG 0.233203 7.1:-24528813 MS.gene024009:CDS
TTTATGATTTGTCGGTATTT+CGG 0.241268 7.1:-24528502 MS.gene024009:CDS
CTCGAATCTCGTCCTGAAAT+TGG 0.251260 7.1:-24529040 MS.gene024009:CDS
CTACAGGAACCTCCAATTTC+AGG 0.253184 7.1:+24529028 None:intergenic
TTCAATTTGCTCTATGGTTT+CGG 0.275699 7.1:-24528851 MS.gene024009:CDS
TGTCATTTCCTTTAAATCAT+AGG 0.293726 7.1:+24528577 None:intergenic
TCTTGAATGGTTCTATTCAT+TGG 0.308230 7.1:-24528640 MS.gene024009:CDS
GGCAATAATAACATCGCTTC+TGG 0.326605 7.1:+24528598 None:intergenic
ATGCATTAAAATCTATAGAT+AGG 0.327811 7.1:+24529110 None:intergenic
GATCTTGCAGTCTTCCTATA+AGG 0.341764 7.1:+24528689 None:intergenic
ACTGCCACTGTCATCGGAAT+TGG 0.354286 7.1:+24528907 None:intergenic
CCACCATTTGTAAAGCATAC+TGG 0.355517 7.1:+24528353 None:intergenic
TACTGACATTTATGATTTGT+CGG 0.363718 7.1:-24528510 MS.gene024009:CDS
CTGCTACAATATCACACTTA+TGG 0.375959 7.1:-24528272 MS.gene024009:CDS
GAATTGGAGGCAATAGTTAA+AGG 0.380125 7.1:+24528923 None:intergenic
AAGCATACTGGGCAAAATTC+CGG 0.382167 7.1:+24528365 None:intergenic
GAATGGTTCTATTCATTGGC+TGG 0.382596 7.1:-24528636 MS.gene024009:CDS
CTCTGTATACACTGCCAATT+GGG 0.382842 7.1:+24528229 None:intergenic
GGAAATTCTGTTGAAGTTGC+CGG 0.384137 7.1:-24529269 MS.gene024009:CDS
GTTACAGAGACTTCTATCTA+TGG 0.407945 7.1:-24528985 MS.gene024009:CDS
AGATGTCTACACTTAAGATA+TGG 0.412369 7.1:-24528454 MS.gene024009:CDS
AGAGTTGGGTCGTTCTTGAA+TGG 0.415164 7.1:-24528653 MS.gene024009:CDS
TAAGCTTGCTCAATGCCATC+AGG 0.418945 7.1:+24528191 None:intergenic
TTCGGGGACTTATCAGTGTA+TGG 0.420938 7.1:-24528484 MS.gene024009:CDS
AATACGCAGTGGATTCATCT+TGG 0.434045 7.1:-24528421 MS.gene024009:CDS
ACTCTGTATACACTGCCAAT+TGG 0.448336 7.1:+24528228 None:intergenic
ATACTCTATAAACAAAAGTC+TGG 0.450762 7.1:+24529147 None:intergenic
ATTCAAGAACGACCCAACTC+TGG 0.455029 7.1:+24528655 None:intergenic
CTCAAAGTGGTCCCAGAGTT+GGG 0.460044 7.1:-24528667 MS.gene024009:CDS
TGAAGACTCTTCTTCGCTGC+AGG 0.463115 7.1:-24529246 MS.gene024009:CDS
AATGTCAGAGATTGGTCTTC+CGG 0.464561 7.1:-24528555 MS.gene024009:CDS
ACAAATGGTGGTGATATTGT+TGG 0.467745 7.1:-24528341 MS.gene024009:CDS
TCTCCCTCAAGAAGTGATAT+CGG 0.474579 7.1:-24529290 MS.gene024009:CDS
TGCCCAGTATGCTTTACAAA+TGG 0.476784 7.1:-24528356 MS.gene024009:CDS
TTACTTTGCAAGATCCCAAT+TGG 0.477110 7.1:-24528243 MS.gene024009:CDS
GAAATGACAATGTCAGAGAT+TGG 0.479009 7.1:-24528563 MS.gene024009:CDS
TTTCCGATATCACTTCTTGA+GGG 0.484662 7.1:+24529287 None:intergenic
CACCATTTGTAAAGCATACT+GGG 0.492872 7.1:+24528354 None:intergenic
CATAAGTGTGATATTGTAGC+AGG 0.499903 7.1:+24528273 None:intergenic
GCAAATTGAAAATACTGTAA+TGG 0.505146 7.1:+24528864 None:intergenic
TGCATTAAAATCTATAGATA+GGG 0.505202 7.1:+24529111 None:intergenic
GCCACTGTCATCGGAATTGG+AGG 0.506025 7.1:+24528910 None:intergenic
CACCGTAGGATTGAATTTGT+AGG 0.507591 7.1:+24528787 None:intergenic
ATTGTTGGACCAGTTGCTGA+TGG 0.507743 7.1:-24528326 MS.gene024009:CDS
TCTCAAAGTGGTCCCAGAGT+TGG 0.515829 7.1:-24528668 MS.gene024009:CDS
GATGTCTACACTTAAGATAT+GGG 0.517647 7.1:-24528453 MS.gene024009:CDS
GCAGGTCTGTGTGTAAGTTA+TGG 0.521738 7.1:-24529228 MS.gene024009:CDS
ACTGGGCAAAATTCCGGAGC+GGG 0.526424 7.1:+24528371 None:intergenic
TATAAACAGAAATCCTCTAC+AGG 0.537465 7.1:+24529012 None:intergenic
ATTTCCGATATCACTTCTTG+AGG 0.538048 7.1:+24529286 None:intergenic
ACTGCTACTGCCACTGTCAT+CGG 0.539657 7.1:+24528901 None:intergenic
AAATCGATATCGAAATCATC+CGG 0.539717 7.1:+24528536 None:intergenic
TTCAAGAACGACCCAACTCT+GGG 0.547729 7.1:+24528656 None:intergenic
TTGTTGGACCAGTTGCTGAT+GGG 0.547888 7.1:-24528325 MS.gene024009:CDS
CGTGTCAACAGATGATTACA+TGG 0.550607 7.1:-24528822 MS.gene024009:CDS
TTAGCAAAGCTTGATGATGA+AGG 0.551202 7.1:-24528299 MS.gene024009:CDS
GAAATTGGAGGTTCCTGTAG+AGG 0.555358 7.1:-24529025 MS.gene024009:CDS
GAATCTCGTCCTGAAATTGG+AGG 0.559526 7.1:-24529037 MS.gene024009:CDS
GTCCTACAAATTCAATCCTA+CGG 0.566267 7.1:-24528789 MS.gene024009:CDS
CGAAGTTGTAAAATGAGGAT+CGG 0.574645 7.1:+24529192 None:intergenic
TCTCTGCTTTCACTCCCTGA+TGG 0.577136 7.1:-24528206 MS.gene024009:CDS
GGTGTGTTGTTCAATTGACT+TGG 0.583610 7.1:-24528768 MS.gene024009:CDS
CTCATTGAGAGCTAATGAGT+GGG 0.584146 7.1:-24528738 MS.gene024009:CDS
TCTCATTGAGAGCTAATGAG+TGG 0.598081 7.1:-24528739 MS.gene024009:CDS
AAATGCGAAGTTGTAAAATG+AGG 0.605127 7.1:+24529187 None:intergenic
GCAATAGTTAAAGGAGACAG+AGG 0.605330 7.1:+24528932 None:intergenic
CTACAATATCACACTTATGG+TGG 0.606381 7.1:-24528269 MS.gene024009:CDS
TGTTGGACCAGTTGCTGATG+GGG 0.607771 7.1:-24528324 MS.gene024009:CDS
GTTGGACCAGTTGCTGATGG+GGG 0.609659 7.1:-24528323 MS.gene024009:CDS
CCAGTATGCTTTACAAATGG+TGG 0.609815 7.1:-24528353 MS.gene024009:CDS
AAGCTTGCTCAATGCCATCA+GGG 0.614477 7.1:+24528192 None:intergenic
CAGCGAAGAAGAGTCTTCAC+CGG 0.614787 7.1:+24529250 None:intergenic
TGTTTGTGAACACGAGTGGA+TGG 0.615768 7.1:+24528959 None:intergenic
ACTTATCAGTGTATGGAATG+TGG 0.619206 7.1:-24528477 MS.gene024009:CDS
TATGATTTGTCGGTATTTCG+GGG 0.643494 7.1:-24528500 MS.gene024009:CDS
TATTTGTTTGTGAACACGAG+TGG 0.650195 7.1:+24528955 None:intergenic
TCAATTGAACAACACACCGT+AGG 0.657645 7.1:+24528773 None:intergenic
TACTGGGCAAAATTCCGGAG+CGG 0.672001 7.1:+24528370 None:intergenic
GCCTCCAATTCCGATGACAG+TGG 0.690053 7.1:-24528911 MS.gene024009:CDS
GGTGATGCAAGAATACGCAG+TGG 0.726589 7.1:-24528432 MS.gene024009:CDS
AAGACTGCAAGATCTCAAAG+TGG 0.731177 7.1:-24528680 MS.gene024009:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGCATTAAAATCTATAGAT+AGG + chr7.1:24528393-24528412 None:intergenic 20.0%
!! TATTATTGCCTATGATTTAA+AGG - chr7.1:24528915-24528934 MS.gene024009:CDS 20.0%
!! TGCATTAAAATCTATAGATA+GGG + chr7.1:24528392-24528411 None:intergenic 20.0%
!!! TATCTATAGATTTTAATGCA+TGG - chr7.1:24528392-24528411 MS.gene024009:CDS 20.0%
! ATACTCTATAAACAAAAGTC+TGG + chr7.1:24528356-24528375 None:intergenic 25.0%
! GCAAATTGAAAATACTGTAA+TGG + chr7.1:24528639-24528658 None:intergenic 25.0%
!! TACTGACATTTATGATTTGT+CGG - chr7.1:24528990-24529009 MS.gene024009:CDS 25.0%
!! TGTCATTTCCTTTAAATCAT+AGG + chr7.1:24528926-24528945 None:intergenic 25.0%
!! TTTATGATTTGTCGGTATTT+CGG - chr7.1:24528998-24529017 MS.gene024009:CDS 25.0%
!!! AGTATTTTCAATTTGCTCTA+TGG - chr7.1:24528643-24528662 MS.gene024009:CDS 25.0%
AAATCGATATCGAAATCATC+CGG + chr7.1:24528967-24528986 None:intergenic 30.0%
AAATGCGAAGTTGTAAAATG+AGG + chr7.1:24528316-24528335 None:intergenic 30.0%
AGATGTCTACACTTAAGATA+TGG - chr7.1:24529046-24529065 MS.gene024009:CDS 30.0%
GATGTCTACACTTAAGATAT+GGG - chr7.1:24529047-24529066 MS.gene024009:CDS 30.0%
TATAAACAGAAATCCTCTAC+AGG + chr7.1:24528491-24528510 None:intergenic 30.0%
! AGATGATTACATGGTAGTTT+TGG - chr7.1:24528687-24528706 MS.gene024009:CDS 30.0%
! GATGATTACATGGTAGTTTT+GGG - chr7.1:24528688-24528707 MS.gene024009:CDS 30.0%
! TCTTGAATGGTTCTATTCAT+TGG - chr7.1:24528860-24528879 MS.gene024009:CDS 30.0%
! TTATGATTTGTCGGTATTTC+GGG - chr7.1:24528999-24529018 MS.gene024009:CDS 30.0%
! TTCAATTTGCTCTATGGTTT+CGG - chr7.1:24528649-24528668 MS.gene024009:CDS 30.0%
!! ATGATTACATGGTAGTTTTG+GGG - chr7.1:24528689-24528708 MS.gene024009:CDS 30.0%
ACTTATCAGTGTATGGAATG+TGG - chr7.1:24529023-24529042 MS.gene024009:CDS 35.0%
ATTTCCGATATCACTTCTTG+AGG + chr7.1:24528217-24528236 None:intergenic 35.0%
CACCATTTGTAAAGCATACT+GGG + chr7.1:24529149-24529168 None:intergenic 35.0%
CATAAGTGTGATATTGTAGC+AGG + chr7.1:24529230-24529249 None:intergenic 35.0%
CGAAGTTGTAAAATGAGGAT+CGG + chr7.1:24528311-24528330 None:intergenic 35.0%
CTACAATATCACACTTATGG+TGG - chr7.1:24529231-24529250 MS.gene024009:CDS 35.0%
CTGCTACAATATCACACTTA+TGG - chr7.1:24529228-24529247 MS.gene024009:CDS 35.0%
GAAATGACAATGTCAGAGAT+TGG - chr7.1:24528937-24528956 MS.gene024009:CDS 35.0%
GAATTGGAGGCAATAGTTAA+AGG + chr7.1:24528580-24528599 None:intergenic 35.0%
GATTCGAGATGCAAAAAATC+AGG + chr7.1:24528448-24528467 None:intergenic 35.0%
GTCCTACAAATTCAATCCTA+CGG - chr7.1:24528711-24528730 MS.gene024009:CDS 35.0%
GTTACAGAGACTTCTATCTA+TGG - chr7.1:24528515-24528534 MS.gene024009:CDS 35.0%
TATTTGTTTGTGAACACGAG+TGG + chr7.1:24528548-24528567 None:intergenic 35.0%
TTACTTTGCAAGATCCCAAT+TGG - chr7.1:24529257-24529276 MS.gene024009:CDS 35.0%
TTTCCGATATCACTTCTTGA+GGG + chr7.1:24528216-24528235 None:intergenic 35.0%
! ACAAATGGTGGTGATATTGT+TGG - chr7.1:24529159-24529178 MS.gene024009:CDS 35.0%
! TATGATTTGTCGGTATTTCG+GGG - chr7.1:24529000-24529019 MS.gene024009:CDS 35.0%
! TCGATTCTGATTTGCCTTAT+AGG - chr7.1:24528797-24528816 MS.gene024009:CDS 35.0%
!! TTAGCAAAGCTTGATGATGA+AGG - chr7.1:24529201-24529220 MS.gene024009:CDS 35.0%
!!! TTTTAATTTTGAACCCGCTC+CGG - chr7.1:24529116-24529135 MS.gene024009:CDS 35.0%
AAGACTGCAAGATCTCAAAG+TGG - chr7.1:24528820-24528839 MS.gene024009:CDS 40.0%
AAGCATACTGGGCAAAATTC+CGG + chr7.1:24529138-24529157 None:intergenic 40.0%
ACTCTGTATACACTGCCAAT+TGG + chr7.1:24529275-24529294 None:intergenic 40.0%
CACCGTAGGATTGAATTTGT+AGG + chr7.1:24528716-24528735 None:intergenic 40.0%
CCACCATTTGTAAAGCATAC+TGG + chr7.1:24529150-24529169 None:intergenic 40.0%
CCAGTATGCTTTACAAATGG+TGG - chr7.1:24529147-24529166 MS.gene024009:CDS 40.0%
CGTGTCAACAGATGATTACA+TGG - chr7.1:24528678-24528697 MS.gene024009:CDS 40.0%
CTCATTGAGAGCTAATGAGT+GGG - chr7.1:24528762-24528781 MS.gene024009:CDS 40.0%
CTCTGTATACACTGCCAATT+GGG + chr7.1:24529274-24529293 None:intergenic 40.0%
GATCTTGCAGTCTTCCTATA+AGG + chr7.1:24528814-24528833 None:intergenic 40.0%
GCAATAGTTAAAGGAGACAG+AGG + chr7.1:24528571-24528590 None:intergenic 40.0%
GGAAATTCTGTTGAAGTTGC+CGG - chr7.1:24528231-24528250 MS.gene024009:CDS 40.0%
GGCAATAATAACATCGCTTC+TGG + chr7.1:24528905-24528924 None:intergenic 40.0%
TCAATTGAACAACACACCGT+AGG + chr7.1:24528730-24528749 None:intergenic 40.0%
TCTCATTGAGAGCTAATGAG+TGG - chr7.1:24528761-24528780 MS.gene024009:CDS 40.0%
TCTCCCTCAAGAAGTGATAT+CGG - chr7.1:24528210-24528229 MS.gene024009:CDS 40.0%
TGCCCAGTATGCTTTACAAA+TGG - chr7.1:24529144-24529163 MS.gene024009:CDS 40.0%
! AATACGCAGTGGATTCATCT+TGG - chr7.1:24529079-24529098 MS.gene024009:CDS 40.0%
! GAATGGTTCTATTCATTGGC+TGG - chr7.1:24528864-24528883 MS.gene024009:CDS 40.0%
! GGTGTGTTGTTCAATTGACT+TGG - chr7.1:24528732-24528751 MS.gene024009:CDS 40.0%
!! AATGTCAGAGATTGGTCTTC+CGG - chr7.1:24528945-24528964 MS.gene024009:CDS 40.0%
AGAGTTGGGTCGTTCTTGAA+TGG - chr7.1:24528847-24528866 MS.gene024009:CDS 45.0%
ATTCAAGAACGACCCAACTC+TGG + chr7.1:24528848-24528867 None:intergenic 45.0%
ATTGTTGGACCAGTTGCTGA+TGG - chr7.1:24529174-24529193 MS.gene024009:CDS 45.0%
CTACAGGAACCTCCAATTTC+AGG + chr7.1:24528475-24528494 None:intergenic 45.0%
CTCGAATCTCGTCCTGAAAT+TGG - chr7.1:24528460-24528479 MS.gene024009:CDS 45.0%
GAAATTGGAGGTTCCTGTAG+AGG - chr7.1:24528475-24528494 MS.gene024009:CDS 45.0%
GAATCTCGTCCTGAAATTGG+AGG - chr7.1:24528463-24528482 MS.gene024009:CDS 45.0%
GCAGGTCTGTGTGTAAGTTA+TGG - chr7.1:24528272-24528291 MS.gene024009:CDS 45.0%
TGTTTGTGAACACGAGTGGA+TGG + chr7.1:24528544-24528563 None:intergenic 45.0%
TTCAAGAACGACCCAACTCT+GGG + chr7.1:24528847-24528866 None:intergenic 45.0%
TTCGGGGACTTATCAGTGTA+TGG - chr7.1:24529016-24529035 MS.gene024009:CDS 45.0%
TTGTTGGACCAGTTGCTGAT+GGG - chr7.1:24529175-24529194 MS.gene024009:CDS 45.0%
! AAGCTTGCTCAATGCCATCA+GGG + chr7.1:24529311-24529330 None:intergenic 45.0%
! TAAGCTTGCTCAATGCCATC+AGG + chr7.1:24529312-24529331 None:intergenic 45.0%
ACTGCCACTGTCATCGGAAT+TGG + chr7.1:24528596-24528615 None:intergenic 50.0%
ACTGCTACTGCCACTGTCAT+CGG + chr7.1:24528602-24528621 None:intergenic 50.0%
CAGCGAAGAAGAGTCTTCAC+CGG + chr7.1:24528253-24528272 None:intergenic 50.0%
CTCAAAGTGGTCCCAGAGTT+GGG - chr7.1:24528833-24528852 MS.gene024009:CDS 50.0%
GGTGATGCAAGAATACGCAG+TGG - chr7.1:24529068-24529087 MS.gene024009:CDS 50.0%
TACTGGGCAAAATTCCGGAG+CGG + chr7.1:24529133-24529152 None:intergenic 50.0%
TCTCAAAGTGGTCCCAGAGT+TGG - chr7.1:24528832-24528851 MS.gene024009:CDS 50.0%
TCTCTGCTTTCACTCCCTGA+TGG - chr7.1:24529294-24529313 MS.gene024009:CDS 50.0%
TGAAGACTCTTCTTCGCTGC+AGG - chr7.1:24528254-24528273 MS.gene024009:CDS 50.0%
TGTTGGACCAGTTGCTGATG+GGG - chr7.1:24529176-24529195 MS.gene024009:CDS 50.0%
ACTGGGCAAAATTCCGGAGC+GGG + chr7.1:24529132-24529151 None:intergenic 55.0%
GCCACTGTCATCGGAATTGG+AGG + chr7.1:24528593-24528612 None:intergenic 55.0%
GCCTCCAATTCCGATGACAG+TGG - chr7.1:24528589-24528608 MS.gene024009:CDS 55.0%
GCTAATCCCCCATCAGCAAC+TGG + chr7.1:24529186-24529205 None:intergenic 55.0%
GTTGGACCAGTTGCTGATGG+GGG - chr7.1:24529177-24529196 MS.gene024009:CDS 55.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 24528190 24529332 24528190 ID=MS.gene024009
chr7.1 mRNA 24528190 24529332 24528190 ID=MS.gene024009.t1;Parent=MS.gene024009
chr7.1 exon 24528190 24529332 24528190 ID=MS.gene024009.t1.exon1;Parent=MS.gene024009.t1
chr7.1 CDS 24528190 24529332 24528190 ID=cds.MS.gene024009.t1;Parent=MS.gene024009.t1
Gene Sequence

>MS.gene024009

ATGGCGAAGAATAGTGTGCATCTCCCTCAAGAAGTGATATCGGAAATTCTGTTGAAGTTGCCGGTGAAGACTCTTCTTCGCTGCAGGTCTGTGTGTAAGTTATGGCTTTCTCTCATTTCCGATCCTCATTTTACAACTTCGCATTTTCAACTTGCTTCATCAACCAGACTTTTGTTTATAGAGTATCGTGATTCTCAAACCCTATCTATAGATTTTAATGCATGGCTTGACGATGATTCTGCATTTTCATTAAGTCCTGATTTTTTGCATCTCGAATCTCGTCCTGAAATTGGAGGTTCCTGTAGAGGATTTCTGTTTATATACTGTTACAGAGACTTCTATCTATGGAATCCATCCACTCGTGTTCACAAACAAATACCTCTGTCTCCTTTAACTATTGCCTCCAATTCCGATGACAGTGGCAGTAGCAGTAGCAGTGACAATGACCATTACAGTATTTTCAATTTGCTCTATGGTTTCGGATACGACGTGTCAACAGATGATTACATGGTAGTTTTGGGGTCCTACAAATTCAATCCTACGGTGTGTTGTTCAATTGACTTGGAGATTTTCTCATTGAGAGCTAATGAGTGGGAAGAAATTGAGTTCGATTCTGATTTGCCTTATAGGAAGACTGCAAGATCTCAAAGTGGTCCCAGAGTTGGGTCGTTCTTGAATGGTTCTATTCATTGGCTGGTTTATAATTATGAGACCAGAAGCGATGTTATTATTGCCTATGATTTAAAGGAAATGACAATGTCAGAGATTGGTCTTCCGGATGATTTCGATATCGATTTTTCTACTGACATTTATGATTTGTCGGTATTTCGGGGACTTATCAGTGTATGGAATGTGGAGATGTCTACACTTAAGATATGGGTGATGCAAGAATACGCAGTGGATTCATCTTGGATTAAGACTCTTGATTTTAATTTTGAACCCGCTCCGGAATTTTGCCCAGTATGCTTTACAAATGGTGGTGATATTGTTGGACCAGTTGCTGATGGGGGATTAGCAAAGCTTGATGATGAAGGAGACCTGCTACAATATCACACTTATGGTGGCTGTTACTTTGCAAGATCCCAATTGGCAGTGTATACAGAGTCTCTGCTTTCACTCCCTGATGGCATTGAGCAAGCTTAA

Protein sequence

>MS.gene024009.t1

MAKNSVHLPQEVISEILLKLPVKTLLRCRSVCKLWLSLISDPHFTTSHFQLASSTRLLFIEYRDSQTLSIDFNAWLDDDSAFSLSPDFLHLESRPEIGGSCRGFLFIYCYRDFYLWNPSTRVHKQIPLSPLTIASNSDDSGSSSSSDNDHYSIFNLLYGFGYDVSTDDYMVVLGSYKFNPTVCCSIDLEIFSLRANEWEEIEFDSDLPYRKTARSQSGPRVGSFLNGSIHWLVYNYETRSDVIIAYDLKEMTMSEIGLPDDFDIDFSTDIYDLSVFRGLISVWNVEMSTLKIWVMQEYAVDSSWIKTLDFNFEPAPEFCPVCFTNGGDIVGPVADGGLAKLDDEGDLLQYHTYGGCYFARSQLAVYTESLLSLPDGIEQA