AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58312

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58312.t1 MTR_8g032390 77.992 259 53 3 4 260 116 372 4.28e-138 393
MS.gene58312.t1 MTR_8g433040 69.615 260 61 5 3 258 114 359 6.41e-117 339
MS.gene58312.t1 MTR_8g032380 69.615 260 61 5 3 258 114 359 6.41e-117 339
MS.gene58312.t1 MTR_8g433030 79.263 217 41 3 46 260 125 339 1.35e-114 332
MS.gene58312.t1 MTR_4g122850 58.333 264 97 9 3 258 101 359 1.32e-91 275
MS.gene58312.t1 MTR_6g060650 54.826 259 107 5 3 257 115 367 7.58e-89 268
MS.gene58312.t1 MTR_3g103020 55.894 263 102 7 3 258 118 373 7.74e-89 268
MS.gene58312.t1 MTR_4g094365 57.854 261 96 8 3 257 106 358 1.10e-87 265
MS.gene58312.t1 MTR_4g117720 55.639 266 104 5 3 259 113 373 6.22e-87 263
MS.gene58312.t1 MTR_4g023090 52.399 271 108 7 3 258 115 379 4.49e-80 246
MS.gene58312.t1 MTR_3g034180 52.030 271 106 8 3 258 223 484 3.03e-78 244
MS.gene58312.t1 MTR_4g118380 53.878 245 96 5 3 236 117 355 1.08e-77 239
MS.gene58312.t1 MTR_4g109270 53.409 264 104 10 3 258 107 359 1.53e-76 236
MS.gene58312.t1 MTR_4g116330 50.763 262 113 7 3 258 124 375 1.26e-75 234
MS.gene58312.t1 MTR_3g034160 54.412 272 98 10 3 258 109 370 3.32e-75 233
MS.gene58312.t1 MTR_4g023130 53.282 259 102 9 3 258 66 308 3.58e-75 231
MS.gene58312.t1 MTR_4g021785 51.737 259 107 8 3 258 107 350 2.93e-74 230
MS.gene58312.t1 MTR_4g023080 51.737 259 106 9 3 258 107 349 2.95e-73 228
MS.gene58312.t1 MTR_4g109280 51.527 262 108 9 3 256 102 352 2.57e-71 223
MS.gene58312.t1 MTR_4g117850 50.000 264 113 8 3 256 119 373 7.04e-71 222
MS.gene58312.t1 MTR_4g023070 48.000 275 114 9 3 258 101 365 4.83e-70 220
MS.gene58312.t1 MTR_4g023380 48.014 277 102 8 3 257 115 371 7.71e-70 219
MS.gene58312.t1 MTR_4g117780 50.000 264 115 11 3 258 108 362 9.43e-68 214
MS.gene58312.t1 MTR_4g023120 46.909 275 117 10 3 258 101 365 6.20e-67 212
MS.gene58312.t1 MTR_3g034130 50.813 246 100 7 3 235 109 346 7.37e-67 212
MS.gene58312.t1 MTR_4g023200 46.538 260 121 7 4 258 109 355 2.55e-65 207
MS.gene58312.t1 MTR_4g117770 50.379 264 114 11 3 258 108 362 4.27e-65 207
MS.gene58312.t1 MTR_4g117810 50.379 264 114 11 3 258 108 362 4.27e-65 207
MS.gene58312.t1 MTR_5g097210 50.566 265 109 11 3 258 107 358 6.39e-65 207
MS.gene58312.t1 MTR_4g023190 47.308 260 118 7 4 258 109 354 8.04e-65 206
MS.gene58312.t1 MTR_1g055135 46.296 270 120 10 3 258 112 370 1.29e-61 198
MS.gene58312.t1 MTR_8g040935 55.825 206 80 6 61 258 1 203 1.97e-61 192
MS.gene58312.t1 MTR_4g023150 45.977 261 121 8 4 258 109 355 4.15e-61 196
MS.gene58312.t1 MTR_5g070130 46.667 270 124 9 3 259 110 372 4.75e-61 197
MS.gene58312.t1 MTR_5g070080 46.468 269 118 10 3 259 127 381 4.99e-60 194
MS.gene58312.t1 MTR_1g055195 46.125 271 106 11 3 257 226 472 3.45e-59 195
MS.gene58312.t1 MTR_4g117870 44.015 259 100 6 3 258 46 262 5.05e-59 188
MS.gene58312.t1 MTR_4g121580 46.875 256 100 8 3 253 115 339 2.43e-58 190
MS.gene58312.t1 MTR_4g116320 53.023 215 91 6 50 258 43 253 1.35e-57 184
MS.gene58312.t1 MTR_4g118400 45.946 259 101 10 3 257 71 294 8.29e-56 181
MS.gene58312.t1 MTR_7g079400 42.804 271 131 9 3 259 73 333 2.87e-55 181
MS.gene58312.t1 MTR_5g070088 44.151 265 133 9 3 259 124 381 3.14e-54 179
MS.gene58312.t1 MTR_4g118370 45.635 252 98 8 15 257 33 254 4.85e-54 175
MS.gene58312.t1 MTR_4g116330 42.366 262 96 7 3 258 124 336 2.09e-53 176
MS.gene58312.t1 MTR_4g117750 44.649 271 123 8 2 257 95 353 8.94e-53 178
MS.gene58312.t1 MTR_4g117750 61.468 109 35 4 154 258 373 478 6.13e-29 114
MS.gene58312.t1 MTR_4g023440 43.411 258 96 7 3 258 118 327 9.95e-53 174
MS.gene58312.t1 MTR_6g463430 53.158 190 78 8 73 258 15 197 8.89e-51 165
MS.gene58312.t1 MTR_1g055250 45.283 212 103 6 45 250 49 253 4.67e-46 157
MS.gene58312.t1 MTR_7g079370 40.146 274 141 10 3 259 85 352 6.04e-46 157
MS.gene58312.t1 MTR_1g055175 48.187 193 87 7 74 258 9 196 1.58e-45 152
MS.gene58312.t1 MTR_8g013010 50.625 160 74 2 4 163 155 309 5.53e-44 151
MS.gene58312.t1 MTR_4g117530 40.741 243 99 8 20 258 47 248 4.06e-43 147
MS.gene58312.t1 MTR_8g102520 38.911 257 137 9 13 259 72 318 7.49e-43 148
MS.gene58312.t1 MTR_1g055165 38.462 260 100 8 3 258 110 313 4.36e-41 144
MS.gene58312.t1 MTR_4g117430 48.780 164 71 5 1 163 1 152 1.51e-40 137
MS.gene58312.t1 MTR_4g114700 37.594 266 98 8 2 254 8 218 1.09e-36 130
MS.gene58312.t1 MTR_4g116340 54.310 116 50 1 3 115 119 234 5.09e-36 129
MS.gene58312.t1 MTR_7g079420 35.206 267 131 9 3 259 906 1140 2.24e-32 125
MS.gene58312.t1 MTR_4g118360 54.545 121 44 4 143 257 5 120 4.83e-30 109
MS.gene58312.t1 MTR_8g098830 38.071 197 103 7 69 257 30 215 6.35e-30 112
MS.gene58312.t1 MTR_2g048580 33.829 269 131 11 3 259 105 338 4.07e-29 112
MS.gene58312.t1 MTR_5g023000 65.169 89 26 3 174 258 7 94 4.08e-27 101
MS.gene58312.t1 MTR_4g122860 33.607 244 113 10 23 257 111 314 2.50e-26 105
MS.gene58312.t1 MTR_7g117720 49.000 100 50 1 3 101 92 191 8.41e-24 97.4
MS.gene58312.t1 MTR_7g117720 51.724 87 35 2 179 258 186 272 1.23e-15 75.1
MS.gene58312.t1 MTR_7g079450 42.857 140 70 4 123 259 1 133 3.91e-23 92.0
MS.gene58312.t1 MTR_6g034720 42.500 120 65 3 26 142 53 171 5.54e-20 85.9
MS.gene58312.t1 MTR_4g023430 49.425 87 36 3 179 258 132 217 1.11e-16 77.0
MS.gene58312.t1 MTR_2g026010 25.830 271 163 12 7 260 98 347 1.47e-14 73.2
MS.gene58312.t1 MTR_3g007360 28.854 253 152 9 16 256 167 403 2.47e-14 72.4
MS.gene58312.t1 MTR_5g057710 28.378 222 135 10 16 229 164 369 6.20e-14 71.2
MS.gene58312.t1 MTR_1g068860 25.500 200 132 6 4 191 95 289 9.11e-14 70.5
MS.gene58312.t1 MTR_5g057690 30.601 183 113 6 25 203 156 328 1.16e-13 70.5
MS.gene58312.t1 MTR_3g007410 29.249 253 151 10 16 256 167 403 1.44e-13 70.1
MS.gene58312.t1 MTR_5g057790 29.075 227 140 10 16 236 164 375 1.56e-13 70.1
MS.gene58312.t1 MTR_1g068875 23.636 275 181 11 4 260 95 358 2.90e-13 69.3
MS.gene58312.t1 MTR_1g094210 25.100 251 153 11 16 255 172 398 1.54e-12 67.0
MS.gene58312.t1 MTR_2g031720 25.993 277 175 11 4 258 100 368 4.80e-12 65.5
MS.gene58312.t1 MTR_2g426020 27.863 262 158 12 14 254 124 375 4.88e-12 65.5
MS.gene58312.t1 MTR_2g028160 25.632 277 166 13 10 257 125 390 5.20e-12 65.5
MS.gene58312.t1 MTR_1g094210 25.328 229 137 10 16 234 172 376 5.23e-12 65.5
MS.gene58312.t1 MTR_8g099460 26.383 235 146 10 40 260 149 370 5.36e-12 65.5
MS.gene58312.t1 MTR_2g028110 24.409 254 171 9 18 260 118 361 6.19e-12 65.1
MS.gene58312.t1 MTR_0667s0010 26.804 194 123 7 11 191 115 302 8.26e-12 65.1
MS.gene58312.t1 MTR_6g027910 26.357 258 158 12 16 255 131 374 8.97e-12 64.7
MS.gene58312.t1 MTR_2g025960 24.314 255 163 10 11 242 26 273 1.30e-11 63.9
MS.gene58312.t1 MTR_2g031640 24.453 274 173 11 4 254 96 358 3.86e-11 62.8
MS.gene58312.t1 MTR_8g101580 24.506 253 168 9 13 255 155 394 4.82e-11 62.8
MS.gene58312.t1 MTR_7g056503 27.068 266 163 13 14 255 139 397 6.11e-11 62.4
MS.gene58312.t1 MTR_2g021155 30.688 189 110 7 16 196 147 322 6.28e-11 62.8
MS.gene58312.t1 MTR_2g031680 25.090 279 174 12 4 260 95 360 8.29e-11 62.0
MS.gene58312.t1 MTR_0129s0070 26.007 273 156 13 16 259 138 393 8.93e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58312.t1 AT3G06240 27.843 255 145 13 14 243 182 422 1.34e-13 70.5

Find 57 sgRNAs with CRISPR-Local

Find 61 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCATGATCCTGTGTATTA+TGG 0.220847 8.2:-65603490 MS.gene58312:CDS
TATTATGGTTTGTGGGTATT+TGG 0.243259 8.2:-65603475 MS.gene58312:CDS
CATTATCATCTATATGGTTT+TGG 0.263227 8.2:-65603805 MS.gene58312:CDS
TACTATCATTATCATCTATA+TGG 0.275465 8.2:-65603811 MS.gene58312:CDS
ATTATTGGAACTAGTAATAT+TGG 0.276981 8.2:-65603286 MS.gene58312:CDS
TATTGTTGTCTTTGATTTAA+CGG 0.293284 8.2:-65603551 MS.gene58312:CDS
TTGGAGAATTTCTTAGTCTA+TGG 0.301949 8.2:-65603456 MS.gene58312:CDS
ATTGTCGGACAGTTGAAATA+TGG 0.329403 8.2:-65603414 MS.gene58312:CDS
AAAGCAGGATCATTGTTTAA+TGG 0.348559 8.2:-65603622 MS.gene58312:CDS
ATGGCCACTTCCAATGCATT+TGG 0.356843 8.2:+65603205 None:intergenic
CTTGTAATTCCTATTGATGC+TGG 0.360313 8.2:-65603349 MS.gene58312:CDS
TGTTTAATGGCGCTATTCAT+TGG 0.420159 8.2:-65603609 MS.gene58312:CDS
AAGTAAAGCCCAGCATCAAT+AGG 0.431025 8.2:+65603340 None:intergenic
TTGTAATTCCTATTGATGCT+GGG 0.431560 8.2:-65603348 MS.gene58312:CDS
ATCCTGTGTATTATGGTTTG+TGG 0.433603 8.2:-65603483 MS.gene58312:CDS
GAGTCTCTGCTTTCACTCCC+TGG 0.434682 8.2:-65603175 MS.gene58312:CDS
ACTGTTAGAGATACCTCTTC+GGG 0.446217 8.2:-65603521 MS.gene58312:CDS
GCTTGTAATTTCAAAGCAAA+AGG 0.447854 8.2:+65603835 None:intergenic
TCTCTTTGAGAGATAATAAG+TGG 0.449844 8.2:-65603696 MS.gene58312:CDS
AACTGTTAGAGATACCTCTT+CGG 0.451813 8.2:-65603522 MS.gene58312:CDS
TCCTGTGTATTATGGTTTGT+GGG 0.474803 8.2:-65603482 MS.gene58312:CDS
CCAAGTGATCATCTCTTAAC+CGG 0.475089 8.2:+65603776 None:intergenic
CGAAATGAATCCAAATGCAT+TGG 0.475555 8.2:-65603215 MS.gene58312:CDS
TTGGTGAAGTATAATAATAA+AGG 0.488795 8.2:-65603256 MS.gene58312:CDS
TCTTTGTGAAACCTAGAGGC+TGG 0.492364 8.2:+65603871 None:intergenic
AGTTGAAATATGGGTGATGA+AGG 0.495178 8.2:-65603404 MS.gene58312:CDS
TTGTCGGACAGTTGAAATAT+GGG 0.496437 8.2:-65603413 MS.gene58312:CDS
GGAAGTTTCATAAATATTGT+CGG 0.513748 8.2:-65603429 MS.gene58312:CDS
AATACAAACAAAATTCGTCT+TGG 0.515801 8.2:-65603381 MS.gene58312:CDS
AGATAAAACTTCATCACAGT+TGG 0.523374 8.2:-65603725 MS.gene58312:CDS
GCCACGGCTTATCGCAAAGC+AGG 0.524609 8.2:-65603637 MS.gene58312:CDS
GTTCAACAAACCTCTACGTA+TGG 0.527840 8.2:-65603897 MS.gene58312:CDS
GGAACTAGTAATATTGGTCG+TGG 0.532601 8.2:-65603280 MS.gene58312:CDS
AAATTTGATCATGGTCCACC+AGG 0.534299 8.2:+65603157 None:intergenic
GAATCCAAATGCATTGGAAG+TGG 0.544695 8.2:-65603209 MS.gene58312:CDS
AACCATAATACACAGGATCA+TGG 0.548106 8.2:+65603488 None:intergenic
ATTAATGGTTCATGCAGAGA+GGG 0.549302 8.2:-65603936 None:intergenic
AATAAGTGGAATGAAATTGA+AGG 0.554610 8.2:-65603682 MS.gene58312:CDS
TAGTAATATTGGTCGTGGAT+TGG 0.554924 8.2:-65603275 MS.gene58312:CDS
TTGTCTTTGATTTAACGGAA+AGG 0.557294 8.2:-65603546 MS.gene58312:CDS
AATTTCTTAGTCTATGGAGT+AGG 0.561569 8.2:-65603450 MS.gene58312:CDS
ACGTATGGAATCCAGCCTCT+AGG 0.562836 8.2:-65603882 MS.gene58312:CDS
AAGCAGAGACTCTGTATACA+TGG 0.569558 8.2:+65603186 None:intergenic
GTTAAGAGATGATCACTTGG+TGG 0.569962 8.2:-65603773 MS.gene58312:CDS
TTTATCTAAGGTTGGACGAG+AGG 0.573185 8.2:+65603741 None:intergenic
CCGGTTAAGAGATGATCACT+TGG 0.577241 8.2:-65603776 MS.gene58312:CDS
CATCACTTATTTGAATGCCA+CGG 0.582461 8.2:-65603653 MS.gene58312:CDS
TATTTCTTTGTGAAACCTAG+AGG 0.610535 8.2:+65603867 None:intergenic
TCCTGCTTTGCGATAAGCCG+TGG 0.619739 8.2:+65603636 None:intergenic
TCTCTGCTTTCACTCCCTGG+TGG 0.631108 8.2:-65603172 MS.gene58312:CDS
ACCCACAAACCATAATACAC+AGG 0.646047 8.2:+65603481 None:intergenic
AATTTGATCATGGTCCACCA+GGG 0.660460 8.2:+65603158 None:intergenic
TCGTTATTATAATATACGAG+TGG 0.662314 8.2:-65603578 MS.gene58312:CDS
AATTAATGGTTCATGCAGAG+AGG 0.662331 8.2:-65603937 None:intergenic
AGGCTGGATTCCATACGTAG+AGG 0.663098 8.2:+65603887 None:intergenic
TGGTTAAAATCATCCCGAAG+AGG 0.681785 8.2:+65603508 None:intergenic
GCATTCAAATAAGTGATGTG+AGG 0.690327 8.2:+65603658 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTGGAACTAGTAATAT+TGG - chr8.2:65603804-65603823 MS.gene58312:CDS 20.0%
!! TACTATCATTATCATCTATA+TGG - chr8.2:65603279-65603298 MS.gene58312:CDS 20.0%
!! TTGGTGAAGTATAATAATAA+AGG - chr8.2:65603834-65603853 MS.gene58312:CDS 20.0%
!!! TATTGTTGTCTTTGATTTAA+CGG - chr8.2:65603539-65603558 MS.gene58312:CDS 20.0%
! AATAAGTGGAATGAAATTGA+AGG - chr8.2:65603408-65603427 MS.gene58312:CDS 25.0%
! AATACAAACAAAATTCGTCT+TGG - chr8.2:65603709-65603728 MS.gene58312:CDS 25.0%
! ACAAAAAGTGGTGATATTAT+TGG - chr8.2:65603789-65603808 MS.gene58312:CDS 25.0%
! GGAAGTTTCATAAATATTGT+CGG - chr8.2:65603661-65603680 MS.gene58312:CDS 25.0%
! TCGTTATTATAATATACGAG+TGG - chr8.2:65603512-65603531 MS.gene58312:CDS 25.0%
!! ACTTTTTGTAGAGTATATAG+GGG + chr8.2:65603778-65603797 None:intergenic 25.0%
!! CATTATCATCTATATGGTTT+TGG - chr8.2:65603285-65603304 MS.gene58312:CDS 25.0%
!!! CACTTTTTGTAGAGTATATA+GGG + chr8.2:65603779-65603798 None:intergenic 25.0%
AAAGCAGGATCATTGTTTAA+TGG - chr8.2:65603468-65603487 MS.gene58312:CDS 30.0%
AATTTCTTAGTCTATGGAGT+AGG - chr8.2:65603640-65603659 MS.gene58312:CDS 30.0%
AGATAAAACTTCATCACAGT+TGG - chr8.2:65603365-65603384 MS.gene58312:CDS 30.0%
CCTATATACTCTACAAAAAG+TGG - chr8.2:65603777-65603796 MS.gene58312:CDS 30.0%
GCTTGTAATTTCAAAGCAAA+AGG + chr8.2:65603258-65603277 None:intergenic 30.0%
TATTTCTTTGTGAAACCTAG+AGG + chr8.2:65603226-65603245 None:intergenic 30.0%
TTGGAGAATTTCTTAGTCTA+TGG - chr8.2:65603634-65603653 MS.gene58312:CDS 30.0%
TTGTAATTCCTATTGATGCT+GGG - chr8.2:65603742-65603761 MS.gene58312:CDS 30.0%
! TATTATGGTTTGTGGGTATT+TGG - chr8.2:65603615-65603634 MS.gene58312:CDS 30.0%
! TCTCTTTGAGAGATAATAAG+TGG - chr8.2:65603394-65603413 MS.gene58312:CDS 30.0%
! TTGTCTTTGATTTAACGGAA+AGG - chr8.2:65603544-65603563 MS.gene58312:CDS 30.0%
!! CTGTGATGAAGTTTTATCTA+AGG + chr8.2:65603364-65603383 None:intergenic 30.0%
!! GATGAAGTTTTATCTAAGGT+TGG + chr8.2:65603360-65603379 None:intergenic 30.0%
!!! CCACTTTTTGTAGAGTATAT+AGG + chr8.2:65603780-65603799 None:intergenic 30.0%
!!! TATATGGTTTTGGTTATGAC+CGG - chr8.2:65603295-65603314 MS.gene58312:CDS 30.0%
AACCATAATACACAGGATCA+TGG + chr8.2:65603605-65603624 None:intergenic 35.0%
AACCATGATCCTGTGTATTA+TGG - chr8.2:65603600-65603619 MS.gene58312:CDS 35.0%
AACTGTTAGAGATACCTCTT+CGG - chr8.2:65603568-65603587 MS.gene58312:CDS 35.0%
AGTTGAAATATGGGTGATGA+AGG - chr8.2:65603686-65603705 MS.gene58312:CDS 35.0%
ATCCTGTGTATTATGGTTTG+TGG - chr8.2:65603607-65603626 MS.gene58312:CDS 35.0%
ATTGTCGGACAGTTGAAATA+TGG - chr8.2:65603676-65603695 MS.gene58312:CDS 35.0%
CATCACTTATTTGAATGCCA+CGG - chr8.2:65603437-65603456 MS.gene58312:CDS 35.0%
CGAAATGAATCCAAATGCAT+TGG - chr8.2:65603875-65603894 MS.gene58312:CDS 35.0%
CTTGTAATTCCTATTGATGC+TGG - chr8.2:65603741-65603760 MS.gene58312:CDS 35.0%
GCATTCAAATAAGTGATGTG+AGG + chr8.2:65603435-65603454 None:intergenic 35.0%
TAGTAATATTGGTCGTGGAT+TGG - chr8.2:65603815-65603834 MS.gene58312:CDS 35.0%
TGTTTAATGGCGCTATTCAT+TGG - chr8.2:65603481-65603500 MS.gene58312:CDS 35.0%
TTGTCGGACAGTTGAAATAT+GGG - chr8.2:65603677-65603696 MS.gene58312:CDS 35.0%
! TCCTGTGTATTATGGTTTGT+GGG - chr8.2:65603608-65603627 MS.gene58312:CDS 35.0%
AAGCAGAGACTCTGTATACA+TGG + chr8.2:65603907-65603926 None:intergenic 40.0%
AAGTAAAGCCCAGCATCAAT+AGG + chr8.2:65603753-65603772 None:intergenic 40.0%
ACCCACAAACCATAATACAC+AGG + chr8.2:65603612-65603631 None:intergenic 40.0%
ACTGTTAGAGATACCTCTTC+GGG - chr8.2:65603569-65603588 MS.gene58312:CDS 40.0%
CCAAGTGATCATCTCTTAAC+CGG + chr8.2:65603317-65603336 None:intergenic 40.0%
GAATCCAAATGCATTGGAAG+TGG - chr8.2:65603881-65603900 MS.gene58312:CDS 40.0%
GGAACTAGTAATATTGGTCG+TGG - chr8.2:65603810-65603829 MS.gene58312:CDS 40.0%
GTTAAGAGATGATCACTTGG+TGG - chr8.2:65603317-65603336 MS.gene58312:CDS 40.0%
GTTCAACAAACCTCTACGTA+TGG - chr8.2:65603193-65603212 MS.gene58312:CDS 40.0%
TGGTTAAAATCATCCCGAAG+AGG + chr8.2:65603585-65603604 None:intergenic 40.0%
! TTTATCTAAGGTTGGACGAG+AGG + chr8.2:65603352-65603371 None:intergenic 40.0%
ATGGCCACTTCCAATGCATT+TGG + chr8.2:65603888-65603907 None:intergenic 45.0%
CCGGTTAAGAGATGATCACT+TGG - chr8.2:65603314-65603333 MS.gene58312:CDS 45.0%
TCTTTGTGAAACCTAGAGGC+TGG + chr8.2:65603222-65603241 None:intergenic 45.0%
ACGTATGGAATCCAGCCTCT+AGG - chr8.2:65603208-65603227 MS.gene58312:CDS 50.0%
AGGCTGGATTCCATACGTAG+AGG + chr8.2:65603206-65603225 None:intergenic 50.0%
GAGTCTCTGCTTTCACTCCC+TGG - chr8.2:65603915-65603934 MS.gene58312:CDS 55.0%
TCCTGCTTTGCGATAAGCCG+TGG + chr8.2:65603457-65603476 None:intergenic 55.0%
TCTCTGCTTTCACTCCCTGG+TGG - chr8.2:65603918-65603937 MS.gene58312:CDS 55.0%
GCCACGGCTTATCGCAAAGC+AGG - chr8.2:65603453-65603472 MS.gene58312:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 65603165 65603947 65603165 ID=MS.gene58312
chr8.2 mRNA 65603165 65603947 65603165 ID=MS.gene58312.t1;Parent=MS.gene58312
chr8.2 exon 65603165 65603947 65603165 ID=MS.gene58312.t1.exon1;Parent=MS.gene58312.t1
chr8.2 CDS 65603165 65603947 65603165 ID=cds.MS.gene58312.t1;Parent=MS.gene58312.t1
Gene Sequence

>MS.gene58312

ATGCAGAGAGGGTTTATAATTTTGCACTGTTCAACAAACCTCTACGTATGGAATCCAGCCTCTAGGTTTCACAAAGAAATATCTTTGTCTCCTTTTGCTTTGAAATTACAAGCATACTATCATTATCATCTATATGGTTTTGGTTATGACCGGTTAAGAGATGATCACTTGGTGGTTTTATTGTCCTCTCGTCCAACCTTAGATAAAACTTCATCACAGTTGGAGTTTTTCTCTTTGAGAGATAATAAGTGGAATGAAATTGAAGGTCCTCACATCACTTATTTGAATGCCACGGCTTATCGCAAAGCAGGATCATTGTTTAATGGCGCTATTCATTGGTTTGCTTCTCGTTATTATAATATACGAGTGGAAGTTATTGTTGTCTTTGATTTAACGGAAAGGAAACTGTTAGAGATACCTCTTCGGGATGATTTTAACCATGATCCTGTGTATTATGGTTTGTGGGTATTTGGAGAATTTCTTAGTCTATGGAGTAGGAAGTTTCATAAATATTGTCGGACAGTTGAAATATGGGTGATGAAGGAATACAAACAAAATTCGTCTTGGACTAAGTCTCTTGTAATTCCTATTGATGCTGGGCTTTACTTTTCCCCTATATACTCTACAAAAAGTGGTGATATTATTGGAACTAGTAATATTGGTCGTGGATTGGTGAAGTATAATAATAAAGGACAGCTGTTAGAGTATCTCGAAATGAATCCAAATGCATTGGAAGTGGCCATGTATACAGAGTCTCTGCTTTCACTCCCTGGTGGACCATGA
Protein sequence

>MS.gene58312.t1

MQRGFIILHCSTNLYVWNPASRFHKEISLSPFALKLQAYYHYHLYGFGYDRLRDDHLVVLLSSRPTLDKTSSQLEFFSLRDNKWNEIEGPHITYLNATAYRKAGSLFNGAIHWFASRYYNIRVEVIVVFDLTERKLLEIPLRDDFNHDPVYYGLWVFGEFLSLWSRKFHKYCRTVEIWVMKEYKQNSSWTKSLVIPIDAGLYFSPIYSTKSGDIIGTSNIGRGLVKYNNKGQLLEYLEMNPNALEVAMYTESLLSLPGGP