Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57536.t1 | RHN40013.1 | 65.9 | 370 | 69 | 9 | 1 | 322 | 31 | 391 | 4.40E-118 | 434.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57536.t1 | Q8GXC7 | 28.1 | 270 | 170 | 9 | 61 | 319 | 163 | 419 | 1.5e-18 | 95.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57536.t1 | A0A396GHE1 | 65.9 | 370 | 69 | 9 | 1 | 322 | 31 | 391 | 3.2e-118 | 434.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57536.t1 | MTR_8g433040 | 62.933 | 375 | 72 | 8 | 1 | 327 | 9 | 364 | 1.90e-145 | 414 |
MS.gene57536.t1 | MTR_8g032380 | 62.933 | 375 | 72 | 8 | 1 | 327 | 9 | 364 | 1.90e-145 | 414 |
MS.gene57536.t1 | MTR_8g032390 | 64.756 | 349 | 87 | 11 | 1 | 322 | 31 | 370 | 2.08e-135 | 389 |
MS.gene57536.t1 | MTR_8g433030 | 59.159 | 333 | 99 | 10 | 1 | 322 | 31 | 337 | 6.57e-107 | 316 |
MS.gene57536.t1 | MTR_3g103020 | 49.602 | 377 | 121 | 11 | 6 | 327 | 16 | 378 | 1.16e-105 | 314 |
MS.gene57536.t1 | MTR_4g122850 | 54.303 | 337 | 129 | 12 | 5 | 327 | 39 | 364 | 5.40e-100 | 300 |
MS.gene57536.t1 | MTR_4g117720 | 51.852 | 351 | 129 | 14 | 1 | 327 | 44 | 378 | 5.25e-99 | 297 |
MS.gene57536.t1 | MTR_4g094365 | 49.062 | 373 | 129 | 10 | 5 | 327 | 3 | 364 | 6.56e-98 | 293 |
MS.gene57536.t1 | MTR_4g109270 | 47.439 | 371 | 128 | 12 | 10 | 327 | 8 | 364 | 8.34e-96 | 288 |
MS.gene57536.t1 | MTR_3g034180 | 46.114 | 386 | 125 | 14 | 8 | 327 | 121 | 489 | 2.51e-92 | 283 |
MS.gene57536.t1 | MTR_4g023090 | 45.663 | 392 | 132 | 15 | 3 | 327 | 9 | 386 | 1.30e-90 | 276 |
MS.gene57536.t1 | MTR_6g060650 | 51.316 | 304 | 124 | 9 | 34 | 326 | 82 | 372 | 2.09e-90 | 275 |
MS.gene57536.t1 | MTR_4g023080 | 45.924 | 368 | 131 | 11 | 7 | 326 | 6 | 353 | 8.76e-90 | 273 |
MS.gene57536.t1 | MTR_4g021785 | 45.257 | 369 | 143 | 11 | 3 | 327 | 2 | 355 | 9.03e-90 | 273 |
MS.gene57536.t1 | MTR_4g023070 | 45.431 | 383 | 127 | 12 | 10 | 326 | 3 | 369 | 1.70e-88 | 270 |
MS.gene57536.t1 | MTR_3g034160 | 46.736 | 383 | 125 | 12 | 8 | 326 | 7 | 374 | 3.36e-88 | 269 |
MS.gene57536.t1 | MTR_4g116330 | 47.200 | 375 | 126 | 13 | 9 | 327 | 22 | 380 | 3.43e-88 | 269 |
MS.gene57536.t1 | MTR_4g023130 | 50.153 | 327 | 136 | 11 | 7 | 326 | 6 | 312 | 4.68e-88 | 266 |
MS.gene57536.t1 | MTR_4g109280 | 45.989 | 374 | 134 | 11 | 5 | 327 | 3 | 359 | 1.87e-86 | 264 |
MS.gene57536.t1 | MTR_4g117780 | 45.652 | 368 | 139 | 11 | 10 | 327 | 11 | 367 | 8.76e-86 | 263 |
MS.gene57536.t1 | MTR_4g117850 | 45.652 | 368 | 135 | 12 | 9 | 324 | 22 | 376 | 1.29e-85 | 263 |
MS.gene57536.t1 | MTR_4g023120 | 44.271 | 384 | 132 | 12 | 10 | 327 | 3 | 370 | 2.77e-85 | 261 |
MS.gene57536.t1 | MTR_4g118380 | 46.537 | 361 | 112 | 11 | 9 | 300 | 7 | 355 | 2.33e-82 | 254 |
MS.gene57536.t1 | MTR_4g117770 | 44.715 | 369 | 143 | 11 | 9 | 327 | 10 | 367 | 2.30e-79 | 246 |
MS.gene57536.t1 | MTR_4g117810 | 44.715 | 369 | 143 | 11 | 9 | 327 | 10 | 367 | 2.30e-79 | 246 |
MS.gene57536.t1 | MTR_3g034130 | 45.070 | 355 | 117 | 11 | 8 | 299 | 7 | 346 | 4.60e-79 | 246 |
MS.gene57536.t1 | MTR_4g023380 | 43.622 | 392 | 121 | 13 | 9 | 327 | 15 | 379 | 2.55e-76 | 239 |
MS.gene57536.t1 | MTR_5g097210 | 43.947 | 380 | 134 | 14 | 3 | 324 | 2 | 360 | 2.96e-76 | 238 |
MS.gene57536.t1 | MTR_1g055135 | 42.377 | 387 | 146 | 14 | 2 | 327 | 5 | 375 | 4.23e-75 | 236 |
MS.gene57536.t1 | MTR_4g023190 | 44.562 | 377 | 137 | 14 | 1 | 325 | 1 | 357 | 5.73e-73 | 229 |
MS.gene57536.t1 | MTR_5g070130 | 43.041 | 388 | 146 | 14 | 1 | 327 | 4 | 377 | 2.24e-72 | 229 |
MS.gene57536.t1 | MTR_4g023200 | 48.601 | 286 | 118 | 11 | 50 | 325 | 92 | 358 | 4.83e-72 | 227 |
MS.gene57536.t1 | MTR_4g023150 | 44.149 | 376 | 141 | 14 | 1 | 325 | 1 | 358 | 5.12e-71 | 224 |
MS.gene57536.t1 | MTR_1g055195 | 46.815 | 314 | 122 | 16 | 33 | 327 | 191 | 478 | 1.34e-68 | 222 |
MS.gene57536.t1 | MTR_4g121580 | 41.954 | 348 | 117 | 11 | 3 | 297 | 4 | 319 | 3.93e-68 | 218 |
MS.gene57536.t1 | MTR_4g117870 | 43.312 | 314 | 116 | 10 | 26 | 327 | 4 | 267 | 5.79e-68 | 214 |
MS.gene57536.t1 | MTR_4g023440 | 40.957 | 376 | 117 | 11 | 3 | 327 | 11 | 332 | 6.05e-66 | 211 |
MS.gene57536.t1 | MTR_4g118400 | 42.202 | 327 | 138 | 11 | 8 | 321 | 6 | 294 | 1.47e-65 | 208 |
MS.gene57536.t1 | MTR_5g070080 | 39.599 | 399 | 156 | 14 | 1 | 327 | 1 | 386 | 2.28e-65 | 211 |
MS.gene57536.t1 | MTR_4g116330 | 40.533 | 375 | 112 | 13 | 9 | 327 | 22 | 341 | 9.33e-63 | 202 |
MS.gene57536.t1 | MTR_5g070088 | 38.404 | 401 | 155 | 15 | 4 | 327 | 1 | 386 | 1.91e-62 | 203 |
MS.gene57536.t1 | MTR_7g079400 | 43.771 | 297 | 135 | 10 | 48 | 327 | 56 | 337 | 1.12e-61 | 200 |
MS.gene57536.t1 | MTR_8g013010 | 44.891 | 274 | 90 | 8 | 5 | 230 | 49 | 309 | 4.65e-59 | 192 |
MS.gene57536.t1 | MTR_7g079370 | 43.369 | 279 | 132 | 9 | 62 | 321 | 79 | 350 | 1.12e-57 | 190 |
MS.gene57536.t1 | MTR_6g463430 | 54.872 | 195 | 78 | 6 | 136 | 327 | 15 | 202 | 2.35e-57 | 184 |
MS.gene57536.t1 | MTR_1g055165 | 36.340 | 377 | 131 | 12 | 1 | 327 | 1 | 318 | 3.22e-56 | 185 |
MS.gene57536.t1 | MTR_8g040935 | 50.754 | 199 | 86 | 4 | 137 | 327 | 14 | 208 | 6.43e-55 | 178 |
MS.gene57536.t1 | MTR_4g117750 | 40.000 | 380 | 145 | 14 | 8 | 326 | 1 | 358 | 1.12e-54 | 186 |
MS.gene57536.t1 | MTR_4g117750 | 55.856 | 111 | 41 | 3 | 221 | 325 | 373 | 481 | 6.46e-29 | 116 |
MS.gene57536.t1 | MTR_4g117530 | 38.415 | 328 | 105 | 9 | 5 | 327 | 18 | 253 | 1.39e-54 | 179 |
MS.gene57536.t1 | MTR_4g116320 | 50.228 | 219 | 90 | 6 | 117 | 323 | 43 | 254 | 2.97e-54 | 178 |
MS.gene57536.t1 | MTR_4g118370 | 43.629 | 259 | 98 | 9 | 80 | 324 | 33 | 257 | 4.05e-50 | 167 |
MS.gene57536.t1 | MTR_8g102520 | 36.932 | 352 | 167 | 14 | 1 | 327 | 1 | 322 | 6.94e-50 | 169 |
MS.gene57536.t1 | MTR_4g116340 | 46.930 | 228 | 78 | 8 | 3 | 196 | 29 | 247 | 3.77e-49 | 165 |
MS.gene57536.t1 | MTR_1g055175 | 47.826 | 207 | 82 | 6 | 135 | 327 | 7 | 201 | 5.58e-47 | 157 |
MS.gene57536.t1 | MTR_7g117720 | 47.423 | 194 | 67 | 6 | 1 | 163 | 1 | 190 | 3.76e-43 | 150 |
MS.gene57536.t1 | MTR_7g117720 | 51.724 | 87 | 30 | 4 | 246 | 321 | 186 | 271 | 3.83e-12 | 66.2 |
MS.gene57536.t1 | MTR_1g055250 | 44.860 | 214 | 98 | 7 | 112 | 314 | 49 | 253 | 4.21e-41 | 146 |
MS.gene57536.t1 | MTR_4g117430 | 50.000 | 164 | 67 | 7 | 68 | 230 | 3 | 152 | 6.41e-41 | 140 |
MS.gene57536.t1 | MTR_7g079420 | 37.132 | 272 | 128 | 9 | 67 | 327 | 905 | 1144 | 9.48e-39 | 146 |
MS.gene57536.t1 | MTR_2g048580 | 31.099 | 373 | 180 | 14 | 1 | 327 | 1 | 342 | 9.25e-37 | 135 |
MS.gene57536.t1 | MTR_4g114700 | 37.079 | 267 | 95 | 10 | 68 | 318 | 9 | 218 | 1.45e-36 | 132 |
MS.gene57536.t1 | MTR_4g122860 | 32.335 | 334 | 129 | 12 | 9 | 327 | 69 | 320 | 2.35e-31 | 120 |
MS.gene57536.t1 | MTR_4g118360 | 51.163 | 129 | 51 | 4 | 206 | 326 | 1 | 125 | 8.52e-30 | 110 |
MS.gene57536.t1 | MTR_8g098830 | 38.776 | 196 | 100 | 8 | 134 | 321 | 32 | 215 | 7.44e-29 | 111 |
MS.gene57536.t1 | MTR_5g023000 | 61.290 | 93 | 30 | 2 | 241 | 327 | 7 | 99 | 8.57e-27 | 102 |
MS.gene57536.t1 | MTR_7g079450 | 44.056 | 143 | 69 | 4 | 190 | 327 | 1 | 137 | 2.93e-25 | 99.0 |
MS.gene57536.t1 | MTR_4g133170 | 26.409 | 337 | 186 | 14 | 7 | 292 | 1 | 326 | 5.76e-23 | 98.6 |
MS.gene57536.t1 | MTR_2g055970 | 27.393 | 303 | 159 | 11 | 8 | 263 | 209 | 497 | 5.83e-23 | 99.8 |
MS.gene57536.t1 | MTR_1g068835 | 25.594 | 379 | 206 | 13 | 7 | 326 | 1 | 362 | 6.71e-23 | 98.2 |
MS.gene57536.t1 | MTR_1g068875 | 25.203 | 369 | 203 | 15 | 7 | 318 | 1 | 353 | 1.71e-22 | 97.1 |
MS.gene57536.t1 | MTR_2g426020 | 26.098 | 387 | 203 | 16 | 10 | 323 | 6 | 382 | 1.72e-22 | 97.4 |
MS.gene57536.t1 | MTR_6g034720 | 46.341 | 123 | 54 | 5 | 91 | 207 | 53 | 169 | 2.47e-22 | 93.6 |
MS.gene57536.t1 | MTR_4g108820 | 30.714 | 280 | 154 | 12 | 2 | 263 | 32 | 289 | 2.67e-22 | 95.5 |
MS.gene57536.t1 | MTR_2g031720 | 27.078 | 373 | 204 | 13 | 10 | 323 | 6 | 369 | 3.35e-22 | 96.3 |
MS.gene57536.t1 | MTR_1g097560 | 26.741 | 359 | 193 | 13 | 10 | 319 | 36 | 373 | 1.61e-21 | 94.4 |
MS.gene57536.t1 | MTR_1g068860 | 25.000 | 360 | 203 | 13 | 7 | 317 | 1 | 342 | 2.29e-21 | 94.0 |
MS.gene57536.t1 | MTR_1g094210 | 25.203 | 369 | 190 | 13 | 10 | 319 | 57 | 398 | 4.78e-21 | 93.2 |
MS.gene57536.t1 | MTR_1g094210 | 25.217 | 345 | 173 | 12 | 10 | 296 | 57 | 374 | 1.13e-20 | 92.4 |
MS.gene57536.t1 | MTR_2g031680 | 25.833 | 360 | 206 | 11 | 10 | 318 | 6 | 355 | 1.47e-20 | 91.7 |
MS.gene57536.t1 | MTR_8g467140 | 26.688 | 311 | 166 | 12 | 1 | 264 | 24 | 319 | 3.30e-20 | 90.1 |
MS.gene57536.t1 | MTR_2g028130 | 25.455 | 330 | 168 | 13 | 10 | 271 | 5 | 324 | 1.82e-19 | 88.6 |
MS.gene57536.t1 | MTR_2g028160 | 25.189 | 397 | 201 | 18 | 10 | 321 | 5 | 390 | 2.36e-19 | 88.6 |
MS.gene57536.t1 | MTR_0667s0010 | 25.215 | 349 | 189 | 12 | 10 | 295 | 6 | 345 | 2.69e-19 | 88.2 |
MS.gene57536.t1 | MTR_2g026010 | 27.106 | 273 | 148 | 12 | 53 | 295 | 78 | 329 | 3.71e-19 | 87.8 |
MS.gene57536.t1 | MTR_5g057790 | 27.374 | 358 | 165 | 14 | 10 | 300 | 46 | 375 | 1.28e-18 | 86.3 |
MS.gene57536.t1 | MTR_2g028140 | 23.590 | 390 | 207 | 13 | 10 | 318 | 5 | 384 | 4.87e-18 | 84.7 |
MS.gene57536.t1 | MTR_2g426060 | 25.707 | 389 | 202 | 17 | 10 | 323 | 6 | 382 | 5.35e-18 | 84.3 |
MS.gene57536.t1 | MTR_3g007330 | 26.230 | 366 | 193 | 14 | 10 | 319 | 48 | 392 | 5.90e-18 | 84.3 |
MS.gene57536.t1 | MTR_1g097490 | 25.613 | 367 | 191 | 13 | 10 | 319 | 49 | 390 | 7.36e-18 | 84.0 |
MS.gene57536.t1 | MTR_3g036430 | 25.706 | 354 | 188 | 16 | 10 | 319 | 20 | 342 | 9.91e-18 | 83.2 |
MS.gene57536.t1 | MTR_2g021050 | 24.219 | 384 | 181 | 15 | 10 | 319 | 5 | 352 | 1.37e-17 | 83.2 |
MS.gene57536.t1 | MTR_2g031640 | 25.664 | 339 | 182 | 15 | 10 | 295 | 6 | 327 | 1.58e-17 | 82.8 |
MS.gene57536.t1 | MTR_2g021150 | 25.858 | 379 | 204 | 17 | 2 | 319 | 6 | 368 | 1.74e-17 | 82.8 |
MS.gene57536.t1 | MTR_4g107820 | 27.157 | 313 | 153 | 14 | 10 | 270 | 36 | 325 | 4.53e-17 | 81.6 |
MS.gene57536.t1 | MTR_4g107820 | 27.157 | 313 | 153 | 14 | 10 | 270 | 36 | 325 | 4.60e-17 | 81.6 |
MS.gene57536.t1 | MTR_4g107780 | 27.157 | 313 | 153 | 14 | 10 | 270 | 36 | 325 | 4.60e-17 | 81.6 |
MS.gene57536.t1 | MTR_2g425980 | 26.786 | 392 | 201 | 18 | 10 | 326 | 5 | 385 | 5.12e-17 | 81.6 |
MS.gene57536.t1 | MTR_4g107780 | 27.157 | 313 | 153 | 14 | 10 | 270 | 36 | 325 | 6.06e-17 | 81.3 |
MS.gene57536.t1 | MTR_3g013740 | 28.615 | 325 | 136 | 14 | 10 | 263 | 44 | 343 | 6.24e-17 | 81.3 |
MS.gene57536.t1 | MTR_2g025420 | 23.750 | 400 | 202 | 16 | 10 | 319 | 6 | 392 | 6.49e-17 | 81.3 |
MS.gene57536.t1 | MTR_5g057710 | 27.301 | 326 | 139 | 14 | 10 | 272 | 46 | 336 | 1.82e-16 | 79.7 |
MS.gene57536.t1 | MTR_1g050542 | 24.793 | 363 | 204 | 13 | 10 | 319 | 58 | 404 | 3.56e-16 | 79.0 |
MS.gene57536.t1 | MTR_2g021770 | 28.846 | 312 | 167 | 15 | 52 | 322 | 108 | 405 | 4.21e-16 | 79.0 |
MS.gene57536.t1 | MTR_6g027910 | 25.389 | 386 | 186 | 17 | 13 | 319 | 12 | 374 | 1.38e-15 | 77.0 |
MS.gene57536.t1 | MTR_1g054725 | 24.668 | 377 | 198 | 16 | 9 | 319 | 19 | 375 | 1.44e-15 | 77.0 |
MS.gene57536.t1 | MTR_1g097330 | 25.956 | 366 | 186 | 16 | 10 | 313 | 16 | 358 | 1.72e-15 | 77.0 |
MS.gene57536.t1 | MTR_2g024100 | 27.027 | 296 | 163 | 12 | 60 | 312 | 91 | 376 | 2.75e-15 | 76.6 |
MS.gene57536.t1 | MTR_2g046900 | 24.762 | 315 | 166 | 10 | 4 | 263 | 22 | 320 | 3.02e-15 | 76.3 |
MS.gene57536.t1 | MTR_5g069390 | 25.617 | 324 | 185 | 14 | 35 | 322 | 112 | 415 | 3.66e-15 | 76.3 |
MS.gene57536.t1 | MTR_4g028510 | 27.796 | 313 | 186 | 12 | 41 | 322 | 97 | 400 | 3.66e-15 | 76.3 |
MS.gene57536.t1 | MTR_4g055060 | 27.559 | 381 | 181 | 14 | 10 | 319 | 30 | 386 | 4.87e-15 | 75.5 |
MS.gene57536.t1 | MTR_2g104340 | 26.684 | 386 | 207 | 18 | 9 | 322 | 13 | 394 | 5.97e-15 | 75.5 |
MS.gene57536.t1 | MTR_2g426090 | 23.410 | 346 | 184 | 12 | 13 | 292 | 9 | 339 | 7.22e-15 | 75.1 |
MS.gene57536.t1 | MTR_4g070550 | 24.633 | 341 | 202 | 15 | 27 | 323 | 55 | 384 | 1.31e-14 | 74.3 |
MS.gene57536.t1 | MTR_5g069120 | 34.483 | 145 | 68 | 4 | 19 | 145 | 42 | 177 | 1.33e-14 | 71.2 |
MS.gene57536.t1 | MTR_8g054320 | 28.793 | 323 | 163 | 16 | 10 | 319 | 32 | 300 | 2.05e-14 | 73.2 |
MS.gene57536.t1 | MTR_3g007430 | 25.344 | 363 | 193 | 12 | 13 | 319 | 46 | 386 | 2.46e-14 | 73.6 |
MS.gene57536.t1 | MTR_3g006670 | 27.619 | 315 | 149 | 12 | 10 | 267 | 49 | 341 | 2.98e-14 | 73.6 |
MS.gene57536.t1 | MTR_1g055065 | 26.335 | 281 | 168 | 9 | 65 | 319 | 20 | 287 | 3.72e-14 | 72.0 |
MS.gene57536.t1 | MTR_2g426070 | 24.217 | 351 | 188 | 15 | 11 | 295 | 7 | 345 | 3.75e-14 | 73.2 |
MS.gene57536.t1 | MTR_2g046920 | 24.759 | 311 | 163 | 11 | 4 | 263 | 18 | 308 | 4.35e-14 | 72.8 |
MS.gene57536.t1 | MTR_4g102410 | 24.495 | 396 | 210 | 15 | 9 | 322 | 60 | 448 | 4.36e-14 | 73.2 |
MS.gene57536.t1 | MTR_2g078870 | 27.322 | 183 | 110 | 5 | 81 | 263 | 78 | 237 | 6.03e-14 | 71.6 |
MS.gene57536.t1 | MTR_5g057020 | 25.938 | 320 | 162 | 13 | 10 | 285 | 46 | 334 | 8.66e-14 | 71.6 |
MS.gene57536.t1 | MTR_3g013770 | 25.867 | 375 | 193 | 13 | 10 | 319 | 33 | 387 | 9.23e-14 | 72.0 |
MS.gene57536.t1 | MTR_4g117550 | 25.570 | 395 | 174 | 18 | 9 | 322 | 16 | 371 | 9.82e-14 | 71.6 |
MS.gene57536.t1 | MTR_3g009310 | 26.480 | 321 | 164 | 11 | 6 | 274 | 38 | 338 | 1.04e-13 | 71.6 |
MS.gene57536.t1 | MTR_8g099460 | 24.147 | 381 | 197 | 14 | 10 | 318 | 5 | 365 | 1.05e-13 | 71.6 |
MS.gene57536.t1 | MTR_4g006270 | 23.824 | 319 | 186 | 12 | 7 | 289 | 1 | 298 | 1.05e-13 | 71.6 |
MS.gene57536.t1 | MTR_0128s0020 | 26.238 | 404 | 192 | 22 | 2 | 318 | 8 | 392 | 2.01e-13 | 70.9 |
MS.gene57536.t1 | MTR_7g062100 | 24.552 | 391 | 206 | 16 | 5 | 319 | 19 | 396 | 2.01e-13 | 70.9 |
MS.gene57536.t1 | MTR_4g030830 | 25.366 | 410 | 181 | 21 | 10 | 319 | 9 | 393 | 2.58e-13 | 70.5 |
MS.gene57536.t1 | MTR_7g007300 | 24.211 | 380 | 185 | 16 | 8 | 319 | 101 | 445 | 3.40e-13 | 70.5 |
MS.gene57536.t1 | MTR_5g097350 | 25.166 | 302 | 178 | 12 | 42 | 320 | 107 | 383 | 3.68e-13 | 70.1 |
MS.gene57536.t1 | MTR_2g038680 | 24.755 | 408 | 198 | 17 | 10 | 322 | 16 | 409 | 4.46e-13 | 69.7 |
MS.gene57536.t1 | MTR_7g070440 | 27.532 | 316 | 157 | 16 | 4 | 260 | 1 | 303 | 6.30e-13 | 69.3 |
MS.gene57536.t1 | MTR_1g056710 | 26.000 | 300 | 162 | 13 | 10 | 263 | 34 | 319 | 7.29e-13 | 68.9 |
MS.gene57536.t1 | MTR_0128s0070 | 25.700 | 393 | 189 | 20 | 10 | 318 | 22 | 395 | 8.10e-13 | 68.9 |
MS.gene57536.t1 | MTR_6g007150 | 26.991 | 226 | 136 | 9 | 56 | 268 | 62 | 271 | 8.40e-13 | 68.6 |
MS.gene57536.t1 | MTR_6g086825 | 27.211 | 294 | 168 | 12 | 65 | 322 | 175 | 458 | 8.83e-13 | 68.9 |
MS.gene57536.t1 | MTR_7g016930 | 28.105 | 306 | 150 | 16 | 9 | 259 | 15 | 305 | 1.07e-12 | 68.2 |
MS.gene57536.t1 | MTR_4g122840 | 38.060 | 134 | 47 | 5 | 197 | 327 | 164 | 264 | 1.13e-12 | 67.4 |
MS.gene57536.t1 | MTR_3g024130 | 27.509 | 269 | 141 | 10 | 63 | 308 | 58 | 295 | 1.14e-12 | 68.2 |
MS.gene57536.t1 | MTR_2g021800 | 23.856 | 306 | 188 | 10 | 52 | 320 | 115 | 412 | 1.42e-12 | 68.6 |
MS.gene57536.t1 | MTR_3g011060 | 29.242 | 277 | 144 | 16 | 63 | 318 | 140 | 385 | 1.57e-12 | 68.2 |
MS.gene57536.t1 | MTR_2g046830 | 25.974 | 308 | 163 | 13 | 4 | 263 | 19 | 309 | 1.92e-12 | 67.8 |
MS.gene57536.t1 | MTR_0054s0100 | 23.762 | 404 | 205 | 16 | 9 | 322 | 16 | 406 | 2.04e-12 | 67.8 |
MS.gene57536.t1 | MTR_4g061340 | 25.532 | 376 | 188 | 17 | 10 | 319 | 26 | 375 | 2.15e-12 | 67.8 |
MS.gene57536.t1 | MTR_3g009300 | 28.058 | 278 | 152 | 13 | 13 | 265 | 37 | 291 | 2.26e-12 | 67.4 |
MS.gene57536.t1 | MTR_7g017040 | 26.389 | 360 | 173 | 15 | 9 | 289 | 15 | 361 | 2.29e-12 | 67.8 |
MS.gene57536.t1 | MTR_3g464500 | 27.147 | 361 | 169 | 17 | 4 | 286 | 21 | 365 | 2.37e-12 | 67.8 |
MS.gene57536.t1 | MTR_4g013180 | 24.934 | 381 | 201 | 14 | 5 | 308 | 6 | 378 | 3.76e-12 | 67.4 |
MS.gene57536.t1 | MTR_0129s0070 | 25.092 | 271 | 156 | 10 | 81 | 320 | 138 | 392 | 4.10e-12 | 67.0 |
MS.gene57536.t1 | MTR_0054s0090 | 24.845 | 322 | 187 | 13 | 41 | 322 | 98 | 404 | 4.11e-12 | 67.0 |
MS.gene57536.t1 | MTR_5g037680 | 26.073 | 303 | 192 | 15 | 35 | 319 | 93 | 381 | 4.43e-12 | 67.0 |
MS.gene57536.t1 | MTR_2g021155 | 28.049 | 246 | 141 | 10 | 65 | 292 | 130 | 357 | 4.64e-12 | 67.4 |
MS.gene57536.t1 | MTR_3g014570 | 26.954 | 371 | 189 | 15 | 10 | 319 | 29 | 378 | 5.00e-12 | 66.6 |
MS.gene57536.t1 | MTR_4g023430 | 39.623 | 106 | 53 | 3 | 231 | 327 | 119 | 222 | 5.80e-12 | 64.7 |
MS.gene57536.t1 | MTR_2g078900 | 23.641 | 368 | 179 | 13 | 10 | 321 | 33 | 354 | 6.05e-12 | 66.2 |
MS.gene57536.t1 | MTR_7g056503 | 26.977 | 215 | 139 | 6 | 62 | 262 | 116 | 326 | 6.64e-12 | 66.2 |
MS.gene57536.t1 | MTR_1g055200 | 47.761 | 67 | 26 | 2 | 64 | 129 | 5 | 63 | 6.72e-12 | 61.6 |
MS.gene57536.t1 | MTR_2g043410 | 26.103 | 272 | 150 | 11 | 62 | 300 | 133 | 386 | 8.40e-12 | 65.9 |
MS.gene57536.t1 | MTR_6g021880 | 27.562 | 283 | 153 | 13 | 66 | 319 | 122 | 381 | 8.51e-12 | 65.9 |
MS.gene57536.t1 | MTR_3g023930 | 23.514 | 370 | 195 | 15 | 6 | 319 | 30 | 367 | 9.90e-12 | 65.5 |
MS.gene57536.t1 | MTR_7g066030 | 26.625 | 323 | 166 | 10 | 6 | 262 | 17 | 334 | 1.08e-11 | 65.5 |
MS.gene57536.t1 | MTR_2g022000 | 23.344 | 317 | 188 | 13 | 52 | 327 | 114 | 416 | 1.43e-11 | 65.5 |
MS.gene57536.t1 | MTR_6g007135 | 24.165 | 389 | 191 | 15 | 10 | 319 | 26 | 389 | 2.12e-11 | 64.7 |
MS.gene57536.t1 | MTR_7g055830 | 26.486 | 370 | 192 | 18 | 10 | 322 | 13 | 359 | 2.45e-11 | 64.3 |
MS.gene57536.t1 | MTR_7g055930 | 25.373 | 335 | 189 | 16 | 41 | 319 | 95 | 424 | 2.75e-11 | 64.3 |
MS.gene57536.t1 | MTR_1004s0010 | 28.017 | 232 | 132 | 9 | 37 | 263 | 92 | 293 | 2.78e-11 | 64.3 |
MS.gene57536.t1 | MTR_2g104280 | 25.000 | 292 | 168 | 10 | 69 | 322 | 125 | 403 | 3.14e-11 | 64.3 |
MS.gene57536.t1 | MTR_7g445890 | 26.531 | 294 | 161 | 15 | 10 | 258 | 16 | 299 | 3.95e-11 | 63.9 |
MS.gene57536.t1 | MTR_4g031770 | 24.437 | 311 | 160 | 10 | 7 | 263 | 1 | 290 | 4.27e-11 | 63.5 |
MS.gene57536.t1 | MTR_3g083660 | 26.996 | 263 | 111 | 11 | 10 | 265 | 25 | 213 | 4.40e-11 | 63.2 |
MS.gene57536.t1 | MTR_0044s0300 | 26.961 | 204 | 122 | 9 | 66 | 263 | 138 | 320 | 5.57e-11 | 63.5 |
MS.gene57536.t1 | MTR_5g056990 | 30.114 | 176 | 83 | 8 | 110 | 272 | 33 | 181 | 6.17e-11 | 62.0 |
MS.gene57536.t1 | MTR_0760s0010 | 26.000 | 300 | 143 | 11 | 15 | 263 | 52 | 323 | 7.00e-11 | 63.2 |
MS.gene57536.t1 | MTR_7g077970 | 26.061 | 330 | 166 | 14 | 7 | 262 | 1 | 326 | 7.84e-11 | 63.2 |
MS.gene57536.t1 | MTR_2g021950 | 25.651 | 269 | 174 | 9 | 71 | 320 | 132 | 393 | 8.65e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57536.t1 | AT3G06240 | 27.547 | 265 | 178 | 6 | 61 | 319 | 163 | 419 | 2.39e-20 | 91.7 |
MS.gene57536.t1 | AT3G23880 | 24.595 | 370 | 203 | 14 | 10 | 323 | 14 | 363 | 8.88e-17 | 80.5 |
MS.gene57536.t1 | AT3G16210 | 25.424 | 295 | 164 | 12 | 9 | 269 | 4 | 276 | 3.50e-11 | 63.9 |
MS.gene57536.t1 | AT4G22390 | 24.834 | 302 | 168 | 13 | 65 | 327 | 93 | 374 | 4.60e-11 | 63.9 |
MS.gene57536.t1 | AT4G22390 | 24.834 | 302 | 168 | 13 | 65 | 327 | 93 | 374 | 5.17e-11 | 63.5 |
Find 71 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTGTTGTCTTTGATTTAA+TGG | 0.084690 | 8.3:-62182515 | MS.gene57536:CDS |
AATTATAAAATTAAAATTAA+AGG | 0.141253 | 8.3:-62182919 | MS.gene57536:CDS |
GGAATAGGAACTTTCATAAT+TGG | 0.168463 | 8.3:-62182399 | MS.gene57536:CDS |
GATTATGGTTTGTGGGTATT+TGG | 0.208731 | 8.3:-62182439 | MS.gene57536:CDS |
GGAAATCGACAGTTGAAATA+TGG | 0.217300 | 8.3:-62182378 | MS.gene57536:CDS |
AAAGCAGGATTATTCTTTAA+TGG | 0.228597 | 8.3:-62182589 | MS.gene57536:CDS |
CCACGTCATCTATATGGTTT+TGG | 0.285724 | 8.3:-62182769 | MS.gene57536:CDS |
AAGCAGGATTATTCTTTAAT+GGG | 0.287791 | 8.3:-62182588 | MS.gene57536:CDS |
TTGGAGAATTTCTCAGTCTA+TGG | 0.288501 | 8.3:-62182420 | MS.gene57536:CDS |
TAATCCTGCTTTGGAAGCTT+TGG | 0.296435 | 8.3:+62182600 | None:intergenic |
GACCATGATCCTGTGGATTA+TGG | 0.306412 | 8.3:-62182454 | MS.gene57536:CDS |
GACCATCCACGTCATCTATA+TGG | 0.352255 | 8.3:-62182775 | MS.gene57536:CDS |
AATCCTGCTTTGGAAGCTTT+GGG | 0.358664 | 8.3:+62182601 | None:intergenic |
TCTTTAATGGGGATATTCAT+TGG | 0.368049 | 8.3:-62182576 | MS.gene57536:CDS |
ATTAAAGAATAATCCTGCTT+TGG | 0.391144 | 8.3:+62182591 | None:intergenic |
ATCTGAAGTGGCCATTTATA+CGG | 0.397013 | 8.3:-62182170 | MS.gene57536:CDS |
AAGCAGAGACTCCGTATAAA+TGG | 0.405306 | 8.3:+62182159 | None:intergenic |
CCAAGTAATCATCTCTTAAT+CGG | 0.422613 | 8.3:+62182740 | None:intergenic |
GTTCTACAAACCTCTACATA+TGG | 0.427198 | 8.3:-62182867 | MS.gene57536:CDS |
TAAAACAGAATCATGGTTGA+TGG | 0.429027 | 8.3:+62182978 | None:intergenic |
TTTATAATTAAAATATCGTC+GGG | 0.432859 | 8.3:+62182933 | None:intergenic |
AATTTCTCAGTCTATGGAAT+AGG | 0.433887 | 8.3:-62182414 | MS.gene57536:CDS |
GGATCATGGTCAAAATCATC+TGG | 0.436812 | 8.3:+62182466 | None:intergenic |
CATCTTGTTAAACTTGTTCA+CGG | 0.438416 | 8.3:+62182122 | None:intergenic |
TCCTGTGGATTATGGTTTGT+GGG | 0.455259 | 8.3:-62182446 | MS.gene57536:CDS |
ATCCTGTGGATTATGGTTTG+TGG | 0.458998 | 8.3:-62182447 | MS.gene57536:CDS |
TCTTTGTGAAATCTAGAAGA+TGG | 0.459093 | 8.3:+62182841 | None:intergenic |
CAGAAGGAAGATATAACATC+TGG | 0.465891 | 8.3:+62183199 | None:intergenic |
GAAATCGACAGTTGAAATAT+GGG | 0.469274 | 8.3:-62182377 | MS.gene57536:CDS |
TATCCCAAAGCTTCCAAAGC+AGG | 0.472312 | 8.3:-62182604 | MS.gene57536:CDS |
GGGGAAAAGAACATAATACT+AGG | 0.479109 | 8.3:+62182304 | None:intergenic |
CCGATTAAGAGATGATTACT+TGG | 0.479528 | 8.3:-62182740 | MS.gene57536:CDS |
GCATGTACTTTGGCAGCAAA+AGG | 0.483005 | 8.3:+62182805 | None:intergenic |
TCAAATCCTGCTGAGGTTGT+CGG | 0.486377 | 8.3:-62183166 | MS.gene57536:CDS |
TAATGGGGATATTCATTGGT+TGG | 0.487283 | 8.3:-62182572 | MS.gene57536:CDS |
TAAACTTGTTCACGGTCACC+AGG | 0.501824 | 8.3:+62182130 | None:intergenic |
AATACAAACAACATTCGTCT+TGG | 0.505881 | 8.3:-62182345 | MS.gene57536:CDS |
GAGTCTCTGCTTTCACTCCC+TGG | 0.511723 | 8.3:-62182148 | MS.gene57536:CDS |
AGTTGAAATATGGGTGATGA+AGG | 0.512041 | 8.3:-62182368 | MS.gene57536:CDS |
GTCGGGGAAGTAGAAAAGTA+TGG | 0.515821 | 8.3:+62182950 | None:intergenic |
TTGTCTTTGATTTAATGGAA+AGG | 0.526787 | 8.3:-62182510 | MS.gene57536:CDS |
ACTTTACCGACAACCTCAGC+AGG | 0.529985 | 8.3:+62183160 | None:intergenic |
AAATTAAAGGTTCATGCAGA+GGG | 0.531783 | 8.3:-62182906 | MS.gene57536:CDS |
AACCATAATCCACAGGATCA+TGG | 0.536939 | 8.3:+62182452 | None:intergenic |
ATTAAGAGATGATTACTTGG+TGG | 0.538629 | 8.3:-62182737 | MS.gene57536:CDS |
TCTCATTTAGAGATAATACA+TGG | 0.548869 | 8.3:-62182672 | MS.gene57536:CDS |
AATACATGGAATGAAATTGA+AGG | 0.550594 | 8.3:-62182658 | MS.gene57536:CDS |
AAAATTAAAGGTTCATGCAG+AGG | 0.552075 | 8.3:-62182907 | MS.gene57536:CDS |
ATATAATGAAGTGCATCCTA+AGG | 0.555527 | 8.3:+62182705 | None:intergenic |
CATCACTTATTTGAATACAA+CGG | 0.561563 | 8.3:-62182629 | MS.gene57536:CDS |
AGCAGGATTATTCTTTAATG+GGG | 0.562885 | 8.3:-62182587 | MS.gene57536:CDS |
TGGTCAAAATCATCTGGAAG+AGG | 0.566442 | 8.3:+62182472 | None:intergenic |
GGGAAAAGAACATAATACTA+GGG | 0.571263 | 8.3:+62182305 | None:intergenic |
GTCATCGTATGCATGTACTT+TGG | 0.576356 | 8.3:+62182795 | None:intergenic |
GGTCCAGTAAAACAGAATCA+TGG | 0.579553 | 8.3:+62182971 | None:intergenic |
AACTGACGGTGATCGTGGAT+TGG | 0.582084 | 8.3:-62182248 | MS.gene57536:CDS |
CCAAAACCATATAGATGACG+TGG | 0.584587 | 8.3:+62182769 | None:intergenic |
ACCCACAAACCATAATCCAC+AGG | 0.594022 | 8.3:+62182445 | None:intergenic |
ATTTGAATGATTAATTCAGA+AGG | 0.600517 | 8.3:+62183183 | None:intergenic |
TAATCATTCAAATCCTGCTG+AGG | 0.610148 | 8.3:-62183173 | MS.gene57536:CDS |
ACTAGGGATTACAAGAGACT+TGG | 0.610650 | 8.3:+62182321 | None:intergenic |
GAATCTGAATGCATCTGAAG+TGG | 0.614691 | 8.3:-62182182 | MS.gene57536:CDS |
AAGATGGATTCCATATGTAG+AGG | 0.617580 | 8.3:+62182857 | None:intergenic |
AACCATATAGATGACGTGGA+TGG | 0.644793 | 8.3:+62182773 | None:intergenic |
GTTGGAACTGACGGTGATCG+TGG | 0.645956 | 8.3:-62182253 | MS.gene57536:CDS |
TTGGCAGCAAAAGGAGACAA+AGG | 0.647941 | 8.3:+62182814 | None:intergenic |
GGTGATATTGTTGGAACTGA+CGG | 0.665403 | 8.3:-62182262 | MS.gene57536:CDS |
AAACTTGTTCACGGTCACCA+GGG | 0.678032 | 8.3:+62182131 | None:intergenic |
TTATTATCATGATATACGAG+TGG | 0.685713 | 8.3:-62182542 | MS.gene57536:CDS |
GTATTCAAATAAGTGATGTG+AGG | 0.692775 | 8.3:+62182634 | None:intergenic |
TTATAATTAAAATATCGTCG+GGG | 0.738865 | 8.3:+62182934 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTATAAAATTAAAATTAA+AGG | - | chr8.3:62182423-62182442 | MS.gene57536:CDS | 0.0% |
!!! | TTTTATAATTAAAATATCGT+CGG | + | chr8.3:62182413-62182432 | None:intergenic | 10.0% |
!! | TTTATAATTAAAATATCGTC+GGG | + | chr8.3:62182412-62182431 | None:intergenic | 15.0% |
!! | ATTTGAATGATTAATTCAGA+AGG | + | chr8.3:62182162-62182181 | None:intergenic | 20.0% |
!! | TTATAATTAAAATATCGTCG+GGG | + | chr8.3:62182411-62182430 | None:intergenic | 20.0% |
!!! | TATTGTTGTCTTTGATTTAA+TGG | - | chr8.3:62182827-62182846 | MS.gene57536:CDS | 20.0% |
! | AAAGCAGGATTATTCTTTAA+TGG | - | chr8.3:62182753-62182772 | MS.gene57536:CDS | 25.0% |
! | AAGCAGGATTATTCTTTAAT+GGG | - | chr8.3:62182754-62182773 | MS.gene57536:CDS | 25.0% |
! | AATACATGGAATGAAATTGA+AGG | - | chr8.3:62182684-62182703 | MS.gene57536:CDS | 25.0% |
! | ATTAAAGAATAATCCTGCTT+TGG | + | chr8.3:62182754-62182773 | None:intergenic | 25.0% |
! | CATCACTTATTTGAATACAA+CGG | - | chr8.3:62182713-62182732 | MS.gene57536:CDS | 25.0% |
! | TCTCATTTAGAGATAATACA+TGG | - | chr8.3:62182670-62182689 | MS.gene57536:CDS | 25.0% |
! | TTATTATCATGATATACGAG+TGG | - | chr8.3:62182800-62182819 | MS.gene57536:CDS | 25.0% |
!! | ACTTTTTGTAGAGTATATAG+GGG | + | chr8.3:62183060-62183079 | None:intergenic | 25.0% |
!! | TTGTCTTTGATTTAATGGAA+AGG | - | chr8.3:62182832-62182851 | MS.gene57536:CDS | 25.0% |
!!! | CACTTTTTGTAGAGTATATA+GGG | + | chr8.3:62183061-62183080 | None:intergenic | 25.0% |
AAAATTAAAGGTTCATGCAG+AGG | - | chr8.3:62182435-62182454 | MS.gene57536:CDS | 30.0% | |
AAATTAAAGGTTCATGCAGA+GGG | - | chr8.3:62182436-62182455 | MS.gene57536:CDS | 30.0% | |
AATACAAACAACATTCGTCT+TGG | - | chr8.3:62182997-62183016 | MS.gene57536:intron | 30.0% | |
AATTTCTCAGTCTATGGAAT+AGG | - | chr8.3:62182928-62182947 | MS.gene57536:CDS | 30.0% | |
ACAAAAAGTGGTGATATTGT+TGG | - | chr8.3:62183071-62183090 | MS.gene57536:intron | 30.0% | |
AGCAGGATTATTCTTTAATG+GGG | - | chr8.3:62182755-62182774 | MS.gene57536:CDS | 30.0% | |
ATATAATGAAGTGCATCCTA+AGG | + | chr8.3:62182640-62182659 | None:intergenic | 30.0% | |
ATTAAGAGATGATTACTTGG+TGG | - | chr8.3:62182605-62182624 | MS.gene57536:CDS | 30.0% | |
CCAAGTAATCATCTCTTAAT+CGG | + | chr8.3:62182605-62182624 | None:intergenic | 30.0% | |
CCTATATACTCTACAAAAAG+TGG | - | chr8.3:62183059-62183078 | MS.gene57536:intron | 30.0% | |
GAAATCGACAGTTGAAATAT+GGG | - | chr8.3:62182965-62182984 | MS.gene57536:CDS | 30.0% | |
GGAATAGGAACTTTCATAAT+TGG | - | chr8.3:62182943-62182962 | MS.gene57536:CDS | 30.0% | |
GGGAAAAGAACATAATACTA+GGG | + | chr8.3:62183040-62183059 | None:intergenic | 30.0% | |
GTATTCAAATAAGTGATGTG+AGG | + | chr8.3:62182711-62182730 | None:intergenic | 30.0% | |
TAAAACAGAATCATGGTTGA+TGG | + | chr8.3:62182367-62182386 | None:intergenic | 30.0% | |
TCTTTAATGGGGATATTCAT+TGG | - | chr8.3:62182766-62182785 | MS.gene57536:CDS | 30.0% | |
TCTTTGTGAAATCTAGAAGA+TGG | + | chr8.3:62182504-62182523 | None:intergenic | 30.0% | |
TGATATGGATACAATTCTTG+CGG | + | chr8.3:62182295-62182314 | None:intergenic | 30.0% | |
!!! | CCACTTTTTGTAGAGTATAT+AGG | + | chr8.3:62183062-62183081 | None:intergenic | 30.0% |
ACATGCAAATTTGCAAAGTG+AGG | + | chr8.3:62182261-62182280 | None:intergenic | 35.0% | |
AGTTGAAATATGGGTGATGA+AGG | - | chr8.3:62182974-62182993 | MS.gene57536:CDS | 35.0% | |
CAGAAGGAAGATATAACATC+TGG | + | chr8.3:62182146-62182165 | None:intergenic | 35.0% | |
CCGATTAAGAGATGATTACT+TGG | - | chr8.3:62182602-62182621 | MS.gene57536:CDS | 35.0% | |
GATGGATGTCTCAAAATCTA+TGG | + | chr8.3:62182349-62182368 | None:intergenic | 35.0% | |
GGAAATCGACAGTTGAAATA+TGG | - | chr8.3:62182964-62182983 | MS.gene57536:CDS | 35.0% | |
GGGGAAAAGAACATAATACT+AGG | + | chr8.3:62183041-62183060 | None:intergenic | 35.0% | |
GTTCTACAAACCTCTACATA+TGG | - | chr8.3:62182475-62182494 | MS.gene57536:CDS | 35.0% | |
TAATCATTCAAATCCTGCTG+AGG | - | chr8.3:62182169-62182188 | MS.gene57536:CDS | 35.0% | |
TAATGGGGATATTCATTGGT+TGG | - | chr8.3:62182770-62182789 | MS.gene57536:CDS | 35.0% | |
TTGGAGAATTTCTCAGTCTA+TGG | - | chr8.3:62182922-62182941 | MS.gene57536:CDS | 35.0% | |
! | AAGATGGATTCCATATGTAG+AGG | + | chr8.3:62182488-62182507 | None:intergenic | 35.0% |
! | ATCTGAAGTGGCCATTTATA+CGG | - | chr8.3:62183172-62183191 | MS.gene57536:CDS | 35.0% |
! | CAACCATGATTCTGTTTTAC+TGG | - | chr8.3:62182368-62182387 | MS.gene57536:CDS | 35.0% |
! | GATTATGGTTTGTGGGTATT+TGG | - | chr8.3:62182903-62182922 | MS.gene57536:CDS | 35.0% |
!!! | TTGGTGGTTTTATTGTCCTT+AGG | - | chr8.3:62182621-62182640 | MS.gene57536:CDS | 35.0% |
AACCATAATCCACAGGATCA+TGG | + | chr8.3:62182893-62182912 | None:intergenic | 40.0% | |
AACCATATAGATGACGTGGA+TGG | + | chr8.3:62182572-62182591 | None:intergenic | 40.0% | |
AAGCAGAGACTCCGTATAAA+TGG | + | chr8.3:62183186-62183205 | None:intergenic | 40.0% | |
ACTAGGGATTACAAGAGACT+TGG | + | chr8.3:62183024-62183043 | None:intergenic | 40.0% | |
CCAAAACCATATAGATGACG+TGG | + | chr8.3:62182576-62182595 | None:intergenic | 40.0% | |
GAATCTGAATGCATCTGAAG+TGG | - | chr8.3:62183160-62183179 | MS.gene57536:CDS | 40.0% | |
GGATCATGGTCAAAATCATC+TGG | + | chr8.3:62182879-62182898 | None:intergenic | 40.0% | |
GGTCCAGTAAAACAGAATCA+TGG | + | chr8.3:62182374-62182393 | None:intergenic | 40.0% | |
GGTGATATTGTTGGAACTGA+CGG | - | chr8.3:62183080-62183099 | MS.gene57536:intron | 40.0% | |
GTCATCGTATGCATGTACTT+TGG | + | chr8.3:62182550-62182569 | None:intergenic | 40.0% | |
TATGGATACAATTCTTGCGG+CGG | + | chr8.3:62182292-62182311 | None:intergenic | 40.0% | |
TGGTCAAAATCATCTGGAAG+AGG | + | chr8.3:62182873-62182892 | None:intergenic | 40.0% | |
! | AGGTCGAGTTGTTGTTGATA+TGG | + | chr8.3:62182310-62182329 | None:intergenic | 40.0% |
! | ATCCTGTGGATTATGGTTTG+TGG | - | chr8.3:62182895-62182914 | MS.gene57536:CDS | 40.0% |
! | CCACGTCATCTATATGGTTT+TGG | - | chr8.3:62182573-62182592 | MS.gene57536:CDS | 40.0% |
! | TCCTGTGGATTATGGTTTGT+GGG | - | chr8.3:62182896-62182915 | MS.gene57536:CDS | 40.0% |
!! | AATCCTGCTTTGGAAGCTTT+GGG | + | chr8.3:62182744-62182763 | None:intergenic | 40.0% |
!! | TAATCCTGCTTTGGAAGCTT+TGG | + | chr8.3:62182745-62182764 | None:intergenic | 40.0% |
!! | TGATTTTGACCATGATCCTG+TGG | - | chr8.3:62182881-62182900 | MS.gene57536:CDS | 40.0% |
ACCCACAAACCATAATCCAC+AGG | + | chr8.3:62182900-62182919 | None:intergenic | 45.0% | |
ATGGAGCGAATTTCAGCAAG+AGG | + | chr8.3:62182330-62182349 | None:intergenic | 45.0% | |
GACCATCCACGTCATCTATA+TGG | - | chr8.3:62182567-62182586 | MS.gene57536:CDS | 45.0% | |
GCATGTACTTTGGCAGCAAA+AGG | + | chr8.3:62182540-62182559 | None:intergenic | 45.0% | |
GTCGGGGAAGTAGAAAAGTA+TGG | + | chr8.3:62182395-62182414 | None:intergenic | 45.0% | |
TATCCCAAAGCTTCCAAAGC+AGG | - | chr8.3:62182738-62182757 | MS.gene57536:CDS | 45.0% | |
TCAAATCCTGCTGAGGTTGT+CGG | - | chr8.3:62182176-62182195 | MS.gene57536:CDS | 45.0% | |
TTGGCAGCAAAAGGAGACAA+AGG | + | chr8.3:62182531-62182550 | None:intergenic | 45.0% | |
! | AAACTTGTTCACGGTCACCA+GGG | + | chr8.3:62183214-62183233 | None:intergenic | 45.0% |
! | GACCATGATCCTGTGGATTA+TGG | - | chr8.3:62182888-62182907 | MS.gene57536:CDS | 45.0% |
! | TAAACTTGTTCACGGTCACC+AGG | + | chr8.3:62183215-62183234 | None:intergenic | 45.0% |
AACTGACGGTGATCGTGGAT+TGG | - | chr8.3:62183094-62183113 | MS.gene57536:intron | 50.0% | |
ACTTTACCGACAACCTCAGC+AGG | + | chr8.3:62182185-62182204 | None:intergenic | 50.0% | |
GAGTCTCTGCTTTCACTCCC+TGG | - | chr8.3:62183194-62183213 | MS.gene57536:CDS | 55.0% | |
GTTGGAACTGACGGTGATCG+TGG | - | chr8.3:62183089-62183108 | MS.gene57536:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 62182129 | 62183235 | 62182129 | ID=MS.gene57536 |
chr8.3 | mRNA | 62182129 | 62183235 | 62182129 | ID=MS.gene57536.t1;Parent=MS.gene57536 |
chr8.3 | exon | 62183136 | 62183235 | 62183136 | ID=MS.gene57536.t1.exon1;Parent=MS.gene57536.t1 |
chr8.3 | CDS | 62183136 | 62183235 | 62183136 | ID=cds.MS.gene57536.t1;Parent=MS.gene57536.t1 |
chr8.3 | exon | 62182129 | 62183012 | 62182129 | ID=MS.gene57536.t1.exon2;Parent=MS.gene57536.t1 |
chr8.3 | CDS | 62182129 | 62183012 | 62182129 | ID=cds.MS.gene57536.t1;Parent=MS.gene57536.t1 |
Gene Sequence |
Protein sequence |