AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011106


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011106.t1 MTR_8g433040 61.517 356 107 6 3 354 35 364 2.04e-135 391
MS.gene011106.t1 MTR_8g032380 61.517 356 107 6 3 354 35 364 2.04e-135 391
MS.gene011106.t1 MTR_8g032390 60.231 347 99 7 3 346 57 367 1.29e-129 376
MS.gene011106.t1 MTR_4g122850 56.452 372 139 11 2 364 17 374 2.19e-122 358
MS.gene011106.t1 MTR_3g103020 54.545 363 133 11 3 354 37 378 1.14e-114 338
MS.gene011106.t1 MTR_4g094365 53.760 359 140 8 3 354 25 364 2.92e-113 335
MS.gene011106.t1 MTR_4g109270 52.893 363 137 10 3 354 25 364 6.69e-108 321
MS.gene011106.t1 MTR_4g021785 52.874 348 134 9 3 346 26 347 9.49e-108 320
MS.gene011106.t1 MTR_8g433030 53.890 347 88 7 3 346 57 334 1.08e-107 319
MS.gene011106.t1 MTR_4g023080 52.450 347 136 9 3 346 26 346 3.90e-107 318
MS.gene011106.t1 MTR_3g034180 52.432 370 138 13 3 354 140 489 2.07e-106 321
MS.gene011106.t1 MTR_6g060650 51.351 370 143 11 1 353 23 372 1.61e-103 310
MS.gene011106.t1 MTR_3g034130 51.240 363 140 12 3 347 26 369 6.06e-102 306
MS.gene011106.t1 MTR_4g023090 50.139 361 146 10 3 346 33 376 1.55e-101 305
MS.gene011106.t1 MTR_3g034160 52.089 359 140 10 3 346 26 367 1.96e-99 300
MS.gene011106.t1 MTR_4g023380 48.549 379 136 10 3 354 33 379 1.97e-99 300
MS.gene011106.t1 MTR_4g023190 48.718 351 149 10 2 346 26 351 2.70e-99 299
MS.gene011106.t1 MTR_4g023200 48.148 351 152 10 2 346 26 352 4.39e-98 296
MS.gene011106.t1 MTR_4g117780 49.862 363 148 12 3 354 28 367 1.11e-97 295
MS.gene011106.t1 MTR_4g023150 47.863 351 153 10 2 346 26 352 1.74e-97 294
MS.gene011106.t1 MTR_4g117850 50.838 358 137 14 3 346 40 372 9.78e-97 293
MS.gene011106.t1 MTR_4g118380 50.712 351 131 9 1 327 23 355 4.36e-96 290
MS.gene011106.t1 MTR_4g023070 47.594 374 155 11 3 356 20 372 5.44e-96 291
MS.gene011106.t1 MTR_4g117720 55.814 301 112 8 60 346 76 369 8.07e-96 290
MS.gene011106.t1 MTR_4g023120 47.425 369 159 10 3 354 20 370 1.27e-94 287
MS.gene011106.t1 MTR_4g109280 49.315 365 142 11 3 354 25 359 5.66e-94 285
MS.gene011106.t1 MTR_4g023130 47.399 346 114 7 3 346 26 305 1.32e-93 283
MS.gene011106.t1 MTR_4g116330 47.324 355 154 9 3 346 40 372 6.95e-92 280
MS.gene011106.t1 MTR_4g117770 50.413 363 146 12 3 354 28 367 6.83e-91 278
MS.gene011106.t1 MTR_4g117810 50.413 363 146 12 3 354 28 367 6.83e-91 278
MS.gene011106.t1 MTR_5g097210 47.170 371 165 12 3 364 26 374 1.03e-88 272
MS.gene011106.t1 MTR_5g070088 44.474 380 166 13 3 354 24 386 7.43e-87 268
MS.gene011106.t1 MTR_1g055135 46.866 367 159 15 3 354 30 375 1.20e-86 267
MS.gene011106.t1 MTR_5g070080 45.526 380 159 13 3 354 27 386 2.81e-86 266
MS.gene011106.t1 MTR_5g070130 47.368 361 153 12 3 346 28 368 3.86e-86 266
MS.gene011106.t1 MTR_4g121580 46.348 356 133 10 3 344 28 339 2.98e-84 261
MS.gene011106.t1 MTR_4g117750 43.968 373 159 15 3 356 20 361 1.93e-77 247
MS.gene011106.t1 MTR_4g117750 60.577 104 36 3 247 346 373 475 3.09e-28 115
MS.gene011106.t1 MTR_4g023440 44.225 355 138 10 3 354 35 332 2.54e-75 236
MS.gene011106.t1 MTR_8g013010 50.385 260 106 5 3 258 71 311 1.35e-73 231
MS.gene011106.t1 MTR_4g117870 46.284 296 115 9 64 354 11 267 2.66e-72 226
MS.gene011106.t1 MTR_1g055195 47.097 310 118 12 68 360 204 484 1.79e-67 221
MS.gene011106.t1 MTR_4g116330 40.563 355 139 10 3 346 40 333 1.35e-66 214
MS.gene011106.t1 MTR_1g055165 39.833 359 142 9 3 354 27 318 5.24e-65 209
MS.gene011106.t1 MTR_4g116320 57.895 209 82 4 143 346 43 250 1.02e-64 207
MS.gene011106.t1 MTR_7g079370 41.803 366 166 15 15 356 16 358 2.22e-64 209
MS.gene011106.t1 MTR_7g079400 47.970 271 119 11 90 346 67 329 1.37e-62 204
MS.gene011106.t1 MTR_4g118400 43.750 288 117 7 68 346 41 292 8.48e-60 195
MS.gene011106.t1 MTR_6g463430 54.369 206 85 6 154 354 1 202 3.25e-57 185
MS.gene011106.t1 MTR_4g118370 46.559 247 97 8 108 346 33 252 5.41e-56 184
MS.gene011106.t1 MTR_8g040935 53.110 209 89 6 154 354 1 208 1.22e-55 181
MS.gene011106.t1 MTR_8g102520 37.572 346 159 13 20 354 23 322 9.84e-54 180
MS.gene011106.t1 MTR_2g048580 34.986 363 180 14 3 354 25 342 1.48e-49 170
MS.gene011106.t1 MTR_4g116340 43.534 232 82 8 3 222 53 247 1.87e-46 159
MS.gene011106.t1 MTR_1g055250 41.736 242 124 7 132 364 43 276 1.03e-45 159
MS.gene011106.t1 MTR_4g117430 52.830 159 59 5 99 256 9 152 7.85e-44 149
MS.gene011106.t1 MTR_1g055175 46.193 197 98 4 164 353 5 200 1.05e-43 150
MS.gene011106.t1 MTR_4g114700 38.462 286 114 6 96 373 9 240 1.13e-42 149
MS.gene011106.t1 MTR_4g117530 40.408 245 105 5 113 354 47 253 3.67e-42 148
MS.gene011106.t1 MTR_7g079420 39.394 264 116 9 95 346 905 1136 4.44e-42 157
MS.gene011106.t1 MTR_4g122860 44.393 214 77 7 173 374 157 340 4.96e-42 150
MS.gene011106.t1 MTR_7g117720 48.529 136 66 2 57 188 49 184 2.39e-35 130
MS.gene011106.t1 MTR_7g117720 48.980 98 35 4 260 346 176 269 5.04e-15 75.1
MS.gene011106.t1 MTR_8g098830 43.085 188 90 8 150 327 16 196 2.55e-32 121
MS.gene011106.t1 MTR_6g034720 54.701 117 51 2 119 233 53 169 3.22e-30 115
MS.gene011106.t1 MTR_4g107820 28.219 365 213 15 3 348 53 387 1.24e-29 118
MS.gene011106.t1 MTR_4g107780 28.219 365 213 15 3 348 53 387 1.24e-29 118
MS.gene011106.t1 MTR_4g107820 28.219 365 213 15 3 348 53 387 1.51e-29 118
MS.gene011106.t1 MTR_4g107780 28.219 365 213 15 3 348 53 387 1.59e-29 118
MS.gene011106.t1 MTR_5g069120 42.021 188 81 7 2 177 7 178 3.41e-29 111
MS.gene011106.t1 MTR_4g118360 52.344 128 52 4 232 353 1 125 3.55e-29 110
MS.gene011106.t1 MTR_1g097560 28.889 360 205 18 3 348 53 375 4.18e-29 116
MS.gene011106.t1 MTR_4g133170 29.394 330 171 15 3 307 21 313 1.55e-28 115
MS.gene011106.t1 MTR_7g056503 29.491 373 221 17 3 346 38 397 2.45e-28 114
MS.gene011106.t1 MTR_8g101580 27.298 359 223 12 3 348 63 396 3.00e-28 114
MS.gene011106.t1 MTR_2g021150 28.453 362 225 17 3 350 31 372 4.19e-28 113
MS.gene011106.t1 MTR_5g023000 61.616 99 35 2 259 354 1 99 4.89e-28 106
MS.gene011106.t1 MTR_3g072470 29.306 389 209 15 3 345 36 404 3.84e-27 111
MS.gene011106.t1 MTR_1g097490 28.571 357 212 15 3 347 66 391 4.98e-27 110
MS.gene011106.t1 MTR_1g068835 26.902 368 214 13 3 347 21 356 5.31e-26 107
MS.gene011106.t1 MTR_3g006670 30.201 298 169 12 2 286 65 336 1.08e-25 107
MS.gene011106.t1 MTR_2g055970 27.198 364 218 14 3 348 228 562 1.98e-25 108
MS.gene011106.t1 MTR_5g057690 31.724 290 162 14 3 287 63 321 2.91e-25 105
MS.gene011106.t1 MTR_4g108820 29.758 289 145 11 3 289 59 291 6.76e-25 103
MS.gene011106.t1 MTR_2g426020 27.020 396 233 17 3 364 23 396 8.38e-25 104
MS.gene011106.t1 MTR_5g011200 29.932 294 176 13 3 287 34 306 1.12e-24 103
MS.gene011106.t1 MTR_4g055060 29.110 292 176 10 2 282 46 317 1.39e-24 103
MS.gene011106.t1 MTR_3g083640 26.359 368 214 16 2 347 71 403 1.91e-24 103
MS.gene011106.t1 MTR_2g046920 29.054 296 175 10 3 289 41 310 2.08e-24 103
MS.gene011106.t1 MTR_7g407070 28.571 294 189 9 2 282 48 333 2.50e-24 103
MS.gene011106.t1 MTR_7g028660 29.063 320 160 12 2 286 27 314 2.59e-24 103
MS.gene011106.t1 MTR_1g094210 27.322 366 205 16 3 347 74 399 2.72e-24 103
MS.gene011106.t1 MTR_4g129190 27.411 394 209 17 3 346 23 389 3.61e-24 102
MS.gene011106.t1 MTR_3g007360 27.945 365 213 16 2 346 68 402 4.71e-24 102
MS.gene011106.t1 MTR_6g021880 29.268 369 214 15 3 347 37 382 4.96e-24 102
MS.gene011106.t1 MTR_7g013590 30.366 382 199 20 3 347 53 404 6.49e-24 102
MS.gene011106.t1 MTR_2g046900 26.975 367 220 15 3 347 45 385 7.69e-24 102
MS.gene011106.t1 MTR_3g014540 30.976 297 169 14 2 287 45 316 1.11e-23 101
MS.gene011106.t1 MTR_3g006500 27.869 366 216 16 2 347 33 370 1.54e-23 100
MS.gene011106.t1 MTR_7g057270 29.487 312 176 12 3 286 43 338 1.71e-23 101
MS.gene011106.t1 MTR_7g079450 45.205 146 64 6 216 354 1 137 1.87e-23 95.1
MS.gene011106.t1 MTR_8g467140 28.374 289 184 11 3 287 49 318 2.09e-23 99.8
MS.gene011106.t1 MTR_2g021190 27.596 366 216 13 2 347 37 373 2.10e-23 100
MS.gene011106.t1 MTR_2g021155 29.730 296 171 10 3 287 53 322 2.63e-23 102
MS.gene011106.t1 MTR_3g030240 26.923 364 207 17 2 347 56 378 2.78e-23 100
MS.gene011106.t1 MTR_2g026010 27.703 296 182 12 91 361 88 376 2.97e-23 100
MS.gene011106.t1 MTR_7g070830 28.443 334 167 13 3 286 38 349 3.22e-23 100
MS.gene011106.t1 MTR_5g057790 29.139 302 164 14 3 287 63 331 6.09e-23 99.4
MS.gene011106.t1 MTR_3g009310 29.831 295 171 12 2 286 58 326 8.38e-23 99.0
MS.gene011106.t1 MTR_3g007410 28.904 301 176 13 2 291 68 341 9.41e-23 99.0
MS.gene011106.t1 MTR_2g043400 28.079 406 202 15 3 346 40 417 9.42e-23 99.4
MS.gene011106.t1 MTR_5g057020 29.276 304 164 12 3 296 63 325 1.00e-22 98.2
MS.gene011106.t1 MTR_2g025960 27.922 308 184 12 91 364 3 306 1.05e-22 97.4
MS.gene011106.t1 MTR_3g030250 27.374 358 218 15 2 347 53 380 1.12e-22 98.6
MS.gene011106.t1 MTR_2g425980 26.263 396 240 15 3 369 22 394 1.38e-22 98.6
MS.gene011106.t1 MTR_0044s0300 27.596 366 216 19 2 347 54 390 1.50e-22 98.2
MS.gene011106.t1 MTR_5g057710 27.717 368 208 16 3 347 63 395 1.57e-22 98.2
MS.gene011106.t1 MTR_2g024110 25.890 309 206 9 64 352 64 369 1.68e-22 97.8
MS.gene011106.t1 MTR_2g031720 27.532 385 232 15 3 367 23 380 1.73e-22 98.2
MS.gene011106.t1 MTR_3g007330 29.195 298 164 12 2 286 64 327 1.93e-22 98.2
MS.gene011106.t1 MTR_1g094210 27.405 343 189 15 3 325 74 376 2.23e-22 98.2
MS.gene011106.t1 MTR_3g007270 28.763 299 181 12 2 286 63 343 2.36e-22 97.8
MS.gene011106.t1 MTR_1g050542 24.658 365 221 14 3 347 75 405 2.49e-22 97.8
MS.gene011106.t1 MTR_1g068860 28.041 296 183 10 91 366 89 374 5.86e-22 96.3
MS.gene011106.t1 MTR_7g070880 27.901 362 180 16 3 307 38 375 8.34e-22 96.7
MS.gene011106.t1 MTR_4g061340 29.568 301 169 15 2 286 42 315 9.80e-22 95.9
MS.gene011106.t1 MTR_4g013175 27.747 364 181 16 5 307 29 371 1.37e-21 95.9
MS.gene011106.t1 MTR_7g056290 29.755 326 175 14 3 292 39 346 1.99e-21 95.5
MS.gene011106.t1 MTR_3g013740 29.167 312 167 13 2 287 60 343 2.16e-21 95.1
MS.gene011106.t1 MTR_3g010970 27.322 366 209 17 2 347 64 392 2.45e-21 94.7
MS.gene011106.t1 MTR_2g028110 25.197 381 236 15 3 361 21 374 2.55e-21 94.7
MS.gene011106.t1 MTR_3g010520 25.485 361 213 16 2 347 41 360 3.62e-21 94.0
MS.gene011106.t1 MTR_7g091640 27.937 315 180 14 2 290 51 344 3.70e-21 94.0
MS.gene011106.t1 MTR_2g047832 27.515 338 189 13 3 307 46 360 4.58e-21 94.4
MS.gene011106.t1 MTR_2g028130 24.876 402 256 15 3 369 22 412 4.64e-21 94.4
MS.gene011106.t1 MTR_7g091630 25.185 405 223 16 2 347 48 431 5.15e-21 94.4
MS.gene011106.t1 MTR_1g054575 28.767 292 173 11 3 287 69 332 5.37e-21 95.1
MS.gene011106.t1 MTR_3g011060 30.693 303 172 15 2 287 44 325 6.53e-21 93.6
MS.gene011106.t1 MTR_4g109290 41.333 150 46 6 3 152 26 133 6.63e-21 89.7
MS.gene011106.t1 MTR_3g436150 30.169 295 177 11 2 282 48 327 7.30e-21 93.6
MS.gene011106.t1 MTR_3g023930 26.111 360 211 15 2 347 50 368 7.68e-21 93.2
MS.gene011106.t1 MTR_4g033495 27.974 311 175 11 3 286 44 332 1.01e-20 93.6
MS.gene011106.t1 MTR_1g442850 31.949 313 147 16 3 282 22 301 1.10e-20 92.8
MS.gene011106.t1 MTR_6g007135 27.807 374 215 16 3 347 43 390 1.19e-20 92.8
MS.gene011106.t1 MTR_3g024150 27.348 362 221 15 2 347 51 386 1.26e-20 92.8
MS.gene011106.t1 MTR_3g014570 29.605 304 162 14 2 286 45 315 1.26e-20 92.8
MS.gene011106.t1 MTR_3g083010 26.799 403 242 15 3 364 23 413 1.35e-20 92.8
MS.gene011106.t1 MTR_1g097330 26.857 350 220 13 3 340 33 358 1.78e-20 92.4
MS.gene011106.t1 MTR_2g031680 28.041 296 185 11 90 367 88 373 2.27e-20 92.0
MS.gene011106.t1 MTR_7g055870 27.251 411 216 18 3 346 30 424 2.28e-20 92.4
MS.gene011106.t1 MTR_2g024100 26.866 402 226 17 3 362 24 399 2.49e-20 92.0
MS.gene011106.t1 MTR_5g022420 26.667 315 191 14 3 307 44 328 2.79e-20 91.7
MS.gene011106.t1 MTR_0115s0020 23.262 374 251 12 3 346 27 394 3.13e-20 91.7
MS.gene011106.t1 MTR_7g056760 26.371 383 225 14 3 346 40 404 3.24e-20 91.7
MS.gene011106.t1 MTR_1g115160 26.648 364 219 15 2 349 38 369 3.76e-20 91.3
MS.gene011106.t1 MTR_0667s0010 28.509 228 135 9 78 282 80 302 4.32e-20 91.3
MS.gene011106.t1 MTR_7g055930 26.699 412 217 18 3 346 30 424 4.46e-20 91.7
MS.gene011106.t1 MTR_3g036430 24.860 358 205 14 3 347 37 343 4.68e-20 90.5
MS.gene011106.t1 MTR_4g070550 27.907 258 144 12 66 286 63 315 5.14e-20 91.3
MS.gene011106.t1 MTR_5g007610 29.801 302 173 15 2 286 57 336 5.53e-20 90.9
MS.gene011106.t1 MTR_6g065980 28.962 366 202 20 2 347 32 359 6.66e-20 90.1
MS.gene011106.t1 MTR_0760s0010 28.011 357 217 14 2 347 63 390 7.16e-20 90.5
MS.gene011106.t1 MTR_7g066000 27.487 382 222 19 3 348 42 404 7.22e-20 90.5
MS.gene011106.t1 MTR_2g046830 29.667 300 180 12 3 295 42 317 8.18e-20 90.5
MS.gene011106.t1 MTR_2g078900 26.910 301 170 13 2 287 49 314 1.03e-19 89.7
MS.gene011106.t1 MTR_7g061060 27.811 338 186 13 3 307 30 342 1.17e-19 90.1
MS.gene011106.t1 MTR_2g029990 26.536 358 230 15 2 347 67 403 1.19e-19 90.1
MS.gene011106.t1 MTR_3g010390 27.614 373 220 18 2 347 49 398 1.23e-19 90.1
MS.gene011106.t1 MTR_8g099460 29.316 307 168 14 75 347 76 367 1.31e-19 89.7
MS.gene011106.t1 MTR_2g043410 26.551 403 212 13 3 346 39 416 1.62e-19 89.7
MS.gene011106.t1 MTR_1g088120 29.379 354 186 16 3 311 27 361 1.76e-19 89.7
MS.gene011106.t1 MTR_3g013770 29.966 297 176 12 2 287 49 324 2.68e-19 89.0
MS.gene011106.t1 MTR_1g054725 26.829 369 219 16 2 347 36 376 2.81e-19 88.6
MS.gene011106.t1 MTR_2g010900 28.704 324 160 17 4 286 1 294 3.21e-19 88.6
MS.gene011106.t1 MTR_2g010920 28.107 338 176 17 3 293 37 354 4.00e-19 88.6
MS.gene011106.t1 MTR_0649s0020 29.049 389 202 21 3 346 28 387 4.54e-19 88.2
MS.gene011106.t1 MTR_2g025420 26.074 326 190 14 81 364 94 410 4.68e-19 88.6
MS.gene011106.t1 MTR_2g426070 25.888 394 235 15 3 361 23 394 4.91e-19 88.2
MS.gene011106.t1 MTR_2g078850 29.195 298 170 14 2 287 46 314 5.20e-19 87.8
MS.gene011106.t1 MTR_6g053240 26.490 302 182 10 2 287 44 321 5.73e-19 88.2
MS.gene011106.t1 MTR_0464s0020 29.518 332 175 15 3 292 40 354 6.30e-19 88.2
MS.gene011106.t1 MTR_3g006570 26.954 371 216 18 2 347 37 377 7.45e-19 87.4
MS.gene011106.t1 MTR_7g055977 27.177 379 193 19 3 337 24 363 8.41e-19 87.4
MS.gene011106.t1 MTR_7g062100 27.179 390 208 17 2 347 40 397 8.88e-19 87.4
MS.gene011106.t1 MTR_2g461450 28.620 297 175 11 3 293 35 300 9.16e-19 87.0
MS.gene011106.t1 MTR_2g028140 28.636 220 128 9 88 282 102 317 9.39e-19 87.4
MS.gene011106.t1 MTR_6g053260 28.188 298 177 11 2 287 353 625 1.21e-18 88.2
MS.gene011106.t1 MTR_3g036290 28.866 291 166 16 2 286 38 293 1.28e-18 86.7
MS.gene011106.t1 MTR_7g060960 27.177 379 185 17 3 348 49 369 1.40e-18 86.7
MS.gene011106.t1 MTR_6g013270 27.540 374 216 20 3 347 46 393 1.89e-18 86.3
MS.gene011106.t1 MTR_2g047892 28.344 314 160 15 3 282 39 321 2.48e-18 86.3
MS.gene011106.t1 MTR_3g010590 26.776 366 214 17 2 347 55 386 2.50e-18 85.9
MS.gene011106.t1 MTR_3g464500 25.758 396 207 15 2 346 43 402 2.92e-18 85.9
MS.gene011106.t1 MTR_3g011100 26.913 379 217 16 2 347 251 602 3.93e-18 86.3
MS.gene011106.t1 MTR_6g017280 28.896 308 174 14 3 286 26 312 4.21e-18 85.5
MS.gene011106.t1 MTR_2g031640 27.500 280 171 12 91 347 90 360 4.29e-18 85.1
MS.gene011106.t1 MTR_4g013180 28.997 369 190 19 3 326 28 369 4.99e-18 85.9
MS.gene011106.t1 MTR_2g021210 26.748 329 195 11 3 327 101 387 5.19e-18 85.5
MS.gene011106.t1 MTR_7g077970 29.412 340 166 16 3 293 24 338 5.77e-18 85.1
MS.gene011106.t1 MTR_1g068875 25.000 368 236 14 3 355 21 363 5.80e-18 84.7
MS.gene011106.t1 MTR_6g007150 28.966 290 173 13 81 347 59 338 6.02e-18 84.3
MS.gene011106.t1 MTR_6g004660 28.283 297 177 11 3 282 33 310 6.36e-18 84.7
MS.gene011106.t1 MTR_2g028160 27.796 313 174 16 92 362 105 407 8.39e-18 84.7
MS.gene011106.t1 MTR_7g066100 27.506 389 214 19 3 346 28 393 8.80e-18 84.3
MS.gene011106.t1 MTR_0242s0060 28.528 326 164 15 3 286 26 324 9.25e-18 84.7
MS.gene011106.t1 MTR_0242s0040 28.528 326 164 15 3 286 26 324 9.25e-18 84.7
MS.gene011106.t1 MTR_7g445890 26.059 307 162 12 2 282 32 299 1.09e-17 84.0
MS.gene011106.t1 MTR_0128s0020 26.531 392 213 17 3 354 35 391 1.12e-17 84.3
MS.gene011106.t1 MTR_2g426090 25.310 403 247 17 3 373 23 403 1.23e-17 84.3
MS.gene011106.t1 MTR_2g010950 27.385 325 163 14 3 286 37 329 1.42e-17 84.0
MS.gene011106.t1 MTR_7g061050 27.139 339 186 13 3 307 30 341 1.43e-17 83.6
MS.gene011106.t1 MTR_3g030330 25.706 354 200 15 2 340 36 341 1.50e-17 83.6
MS.gene011106.t1 MTR_7g078840 28.746 327 180 14 3 286 27 343 1.99e-17 83.6
MS.gene011106.t1 MTR_8g062660 26.183 317 165 13 2 287 38 316 2.05e-17 84.3
MS.gene011106.t1 MTR_5g056020 27.778 324 179 13 7 290 38 346 2.05e-17 84.0
MS.gene011106.t1 MTR_2g046800 27.742 310 187 12 3 287 31 328 2.16e-17 83.2
MS.gene011106.t1 MTR_6g055210 28.660 321 173 14 3 290 39 336 2.52e-17 83.6
MS.gene011106.t1 MTR_5g069760 27.987 318 155 15 3 286 23 300 2.61e-17 82.8
MS.gene011106.t1 MTR_3g030350 27.797 295 166 12 2 282 51 312 3.03e-17 82.8
MS.gene011106.t1 MTR_3g011020 27.070 314 154 12 2 289 44 308 3.26e-17 82.4
MS.gene011106.t1 MTR_3g437520 29.532 342 165 18 3 292 40 357 3.84e-17 83.2
MS.gene011106.t1 MTR_7g078040 27.950 322 184 12 3 286 26 337 4.12e-17 82.8
MS.gene011106.t1 MTR_3g023940 25.275 364 225 14 2 347 50 384 4.13e-17 82.4
MS.gene011106.t1 MTR_3g036335 26.984 378 205 18 2 347 57 395 6.33e-17 82.0
MS.gene011106.t1 MTR_3g010620 25.000 388 203 17 2 347 52 393 6.49e-17 82.0
MS.gene011106.t1 MTR_3g080370 26.202 416 215 18 3 354 38 425 6.91e-17 82.0
MS.gene011106.t1 MTR_3g024110 23.919 347 210 14 2 340 117 417 7.04e-17 82.0
MS.gene011106.t1 MTR_4g129160 26.266 316 190 12 3 286 25 329 7.32e-17 81.3
MS.gene011106.t1 MTR_7g056260 27.796 313 169 14 3 286 31 315 7.38e-17 80.9
MS.gene011106.t1 MTR_3g010430 26.064 376 214 18 2 347 52 393 8.84e-17 81.6
MS.gene011106.t1 MTR_5g021860 27.089 347 176 17 3 291 47 374 9.13e-17 82.0
MS.gene011106.t1 MTR_7g060940 28.097 331 157 15 3 289 39 332 9.53e-17 81.3
MS.gene011106.t1 MTR_1g055200 51.136 88 33 4 93 177 6 86 1.10e-16 75.5
MS.gene011106.t1 MTR_5g046300 26.117 291 174 13 2 282 20 279 1.10e-16 80.9
MS.gene011106.t1 MTR_5g046290 26.117 291 174 13 2 282 20 279 1.10e-16 80.9
MS.gene011106.t1 MTR_5g021860 27.089 347 176 17 3 291 47 374 1.29e-16 81.3
MS.gene011106.t1 MTR_0097s0030 28.247 308 166 12 3 284 31 309 1.36e-16 80.9
MS.gene011106.t1 MTR_2g047240 28.247 308 166 12 3 284 31 309 1.36e-16 80.9
MS.gene011106.t1 MTR_0128s0070 26.650 394 209 19 3 354 39 394 1.47e-16 80.9
MS.gene011106.t1 MTR_7g022600 25.553 407 219 18 3 348 40 423 1.67e-16 80.9
MS.gene011106.t1 MTR_3g009260 28.276 290 165 12 3 282 58 314 1.73e-16 80.5
MS.gene011106.t1 MTR_0128s0010 27.759 299 180 12 3 282 38 319 2.27e-16 80.5
MS.gene011106.t1 MTR_5g096710 28.479 309 164 14 3 282 40 320 2.39e-16 80.1
MS.gene011106.t1 MTR_7g056003 27.900 319 167 15 3 286 32 322 2.86e-16 80.1
MS.gene011106.t1 MTR_2g021050 23.899 318 178 12 88 368 90 380 3.39e-16 79.7
MS.gene011106.t1 MTR_2g047200 26.623 308 175 13 3 282 37 321 4.22e-16 79.3
MS.gene011106.t1 MTR_3g010920 24.863 366 212 17 2 347 60 382 4.25e-16 79.3
MS.gene011106.t1 MTR_3g013470 27.815 302 172 13 5 286 14 289 4.29e-16 79.3
MS.gene011106.t1 MTR_5g037680 24.691 324 213 10 3 307 25 336 4.38e-16 79.7
MS.gene011106.t1 MTR_1g114700 26.810 373 215 16 3 347 46 388 6.34e-16 79.0
MS.gene011106.t1 MTR_7g056710 27.508 309 175 12 3 291 35 314 6.51e-16 79.0
MS.gene011106.t1 MTR_7g066030 25.312 320 180 12 3 286 38 334 8.61e-16 78.6
MS.gene011106.t1 MTR_2g021252 25.862 290 180 11 2 287 63 321 9.28e-16 78.6
MS.gene011106.t1 MTR_7g070440 27.483 302 177 12 3 284 24 303 1.01e-15 78.2
MS.gene011106.t1 MTR_1g055375 26.954 371 223 19 2 347 20 367 1.25e-15 77.8
MS.gene011106.t1 MTR_0831s0010 27.164 335 188 15 3 307 67 375 1.41e-15 78.2
MS.gene011106.t1 MTR_2g047878 27.128 376 194 16 2 346 37 363 1.49e-15 77.4
MS.gene011106.t1 MTR_7g066840 25.490 357 211 14 3 326 40 374 1.66e-15 77.8
MS.gene011106.t1 MTR_4g030830 24.173 393 228 14 3 348 26 395 1.71e-15 77.8
MS.gene011106.t1 MTR_5g046260 23.229 353 190 15 2 347 20 298 1.87e-15 76.6
MS.gene011106.t1 MTR_4g117550 26.720 378 198 19 3 345 34 367 2.71e-15 77.0
MS.gene011106.t1 MTR_2g021800 24.557 395 231 17 3 346 33 411 3.11e-15 77.0
MS.gene011106.t1 MTR_7g007300 28.105 306 155 14 2 287 119 379 3.16e-15 77.0
MS.gene011106.t1 MTR_4g030090 25.926 351 190 13 3 307 31 357 3.20e-15 77.0
MS.gene011106.t1 MTR_0054s0090 25.862 290 172 12 92 346 120 401 3.92e-15 76.6
MS.gene011106.t1 MTR_4g037465 26.823 384 219 19 2 348 37 395 3.99e-15 76.6
MS.gene011106.t1 MTR_7g050520 27.812 320 168 13 3 292 39 325 4.57e-15 76.3
MS.gene011106.t1 MTR_5g009060 29.412 323 171 16 1 286 40 342 7.67e-15 75.9
MS.gene011106.t1 MTR_7g066060 25.000 388 220 17 6 346 43 406 7.87e-15 76.3
MS.gene011106.t1 MTR_0064s0160 24.516 310 190 9 3 282 59 354 1.16e-14 75.5
MS.gene011106.t1 MTR_5g057643 27.350 234 129 9 3 222 63 269 1.40e-14 73.6
MS.gene011106.t1 MTR_7g079160 25.474 369 196 15 3 307 25 378 1.90e-14 74.7
MS.gene011106.t1 MTR_1g112930 26.190 294 178 13 3 287 42 305 2.53e-14 73.9
MS.gene011106.t1 MTR_0707s0020 24.402 418 223 19 3 345 43 442 2.58e-14 74.3
MS.gene011106.t1 MTR_5g027330 26.280 293 186 13 7 282 61 340 2.86e-14 74.3
MS.gene011106.t1 MTR_8g073550 29.787 188 107 8 2 182 46 215 3.16e-14 72.0
MS.gene011106.t1 MTR_7g066850 25.316 316 179 13 2 289 39 325 3.33e-14 73.9
MS.gene011106.t1 MTR_7g056820 24.599 374 231 15 3 347 24 375 3.33e-14 73.6
MS.gene011106.t1 MTR_0627s0010 27.795 331 177 17 3 291 55 365 3.64e-14 73.9
MS.gene011106.t1 MTR_8g046310 26.111 360 229 15 3 345 33 372 3.65e-14 73.6
MS.gene011106.t1 MTR_5g027370 26.190 294 187 13 7 283 50 330 3.85e-14 73.9
MS.gene011106.t1 MTR_6g090180 25.610 328 182 11 3 286 64 373 3.96e-14 73.6
MS.gene011106.t1 MTR_5g096630 26.923 260 166 10 3 241 35 291 4.39e-14 73.6
MS.gene011106.t1 MTR_6g014720 26.611 357 202 19 15 347 55 375 6.20e-14 72.8
MS.gene011106.t1 MTR_7g078900 26.042 384 221 16 3 341 29 394 8.34e-14 72.8
MS.gene011106.t1 MTR_2g104340 24.737 380 231 13 3 346 31 391 1.49e-13 71.6
MS.gene011106.t1 MTR_7g056737 27.564 312 172 14 3 291 39 319 1.59e-13 71.6
MS.gene011106.t1 MTR_0054s0100 24.742 291 174 12 92 345 120 402 1.68e-13 71.6
MS.gene011106.t1 MTR_1g055070 26.400 375 199 17 3 347 66 393 1.75e-13 71.6
MS.gene011106.t1 MTR_7g056717 26.149 348 189 14 3 314 39 354 1.88e-13 71.6
MS.gene011106.t1 MTR_7g061090 25.714 315 185 13 3 286 39 335 1.99e-13 71.6
MS.gene011106.t1 MTR_5g043160 24.620 329 187 15 3 286 67 379 2.09e-13 71.6
MS.gene011106.t1 MTR_4g122840 39.259 135 45 4 223 354 164 264 2.34e-13 70.1
MS.gene011106.t1 MTR_5g068040 27.687 307 163 11 3 286 33 303 2.53e-13 70.9
MS.gene011106.t1 MTR_5g097330 27.941 272 170 12 93 345 133 397 2.68e-13 71.2
MS.gene011106.t1 MTR_3g030320 25.362 276 175 12 89 348 40 300 3.09e-13 70.1
MS.gene011106.t1 MTR_6g092560 27.119 354 179 17 3 307 29 352 3.18e-13 70.9
MS.gene011106.t1 MTR_2g022000 25.784 287 167 11 94 343 130 407 3.38e-13 70.9
MS.gene011106.t1 MTR_7g077070 25.519 337 184 14 1 292 31 345 3.58e-13 70.9
MS.gene011106.t1 MTR_7g056570 26.774 310 161 12 3 282 35 308 3.92e-13 70.9
MS.gene011106.t1 MTR_0129s0050 26.897 290 166 11 97 346 120 403 4.11e-13 70.5
MS.gene011106.t1 MTR_3g058480 26.531 294 161 14 2 274 55 314 4.15e-13 70.1
MS.gene011106.t1 MTR_4g006270 24.601 313 165 14 91 364 87 367 4.21e-13 70.5
MS.gene011106.t1 MTR_5g048160 21.935 310 201 9 3 282 21 319 4.41e-13 70.5
MS.gene011106.t1 MTR_7g066080 27.097 310 184 14 3 286 33 326 4.51e-13 70.5
MS.gene011106.t1 MTR_7g055987 26.791 321 166 18 3 291 37 320 5.27e-13 70.1
MS.gene011106.t1 MTR_2g040050 24.229 227 133 8 73 282 16 220 5.86e-13 68.6
MS.gene011106.t1 MTR_7g035295 25.325 308 165 13 3 286 33 299 1.11e-12 69.3
MS.gene011106.t1 MTR_2g031700 30.714 140 88 5 91 224 89 225 1.17e-12 68.2
MS.gene011106.t1 MTR_4g008790 26.140 329 165 14 5 284 58 357 1.21e-12 69.3
MS.gene011106.t1 MTR_5g097350 25.069 363 240 13 3 346 33 382 1.54e-12 68.6
MS.gene011106.t1 MTR_5g096900 32.184 174 102 7 90 256 125 289 1.70e-12 68.2
MS.gene011106.t1 MTR_8g464770 27.213 305 179 13 5 286 31 315 1.71e-12 68.6
MS.gene011106.t1 MTR_4g030980 25.073 343 177 13 3 286 32 353 3.01e-12 67.8
MS.gene011106.t1 MTR_7g056797 24.359 390 224 17 2 346 39 402 3.37e-12 67.8
MS.gene011106.t1 MTR_6g048120 26.846 298 188 12 2 287 52 331 3.84e-12 67.4
MS.gene011106.t1 MTR_3g024040 25.685 292 176 10 2 286 47 304 4.67e-12 67.0
MS.gene011106.t1 MTR_1g055145 44.211 95 44 4 183 273 113 202 6.40e-12 65.9
MS.gene011106.t1 MTR_6g046320 26.163 344 185 19 3 293 56 383 6.77e-12 67.0
MS.gene011106.t1 MTR_7g050490 31.606 193 89 7 3 181 25 188 1.69e-11 63.2
MS.gene011106.t1 MTR_3g058440 29.694 229 123 12 1 213 50 256 1.75e-11 65.1
MS.gene011106.t1 MTR_7g017040 24.935 385 222 19 3 345 33 392 1.85e-11 65.5
MS.gene011106.t1 MTR_1g112010 26.087 322 176 14 8 307 2 283 1.85e-11 65.1
MS.gene011106.t1 MTR_4g011660 26.316 323 175 15 3 282 36 338 1.91e-11 65.5
MS.gene011106.t1 MTR_7g052670 25.122 410 218 19 3 350 38 420 2.39e-11 65.1
MS.gene011106.t1 MTR_6g065510 27.193 228 123 10 109 307 76 289 2.58e-11 64.7
MS.gene011106.t1 MTR_0129s0070 24.346 382 225 17 3 345 34 390 2.79e-11 65.1
MS.gene011106.t1 MTR_1g097370 24.022 179 124 5 139 307 135 311 2.80e-11 65.1
MS.gene011106.t1 MTR_5g069390 24.412 340 211 13 3 307 43 371 3.81e-11 64.7
MS.gene011106.t1 MTR_8g064890 25.306 245 153 9 66 290 94 328 4.11e-11 64.3
MS.gene011106.t1 MTR_5g057040 28.431 204 117 9 3 198 63 245 4.41e-11 65.1
MS.gene011106.t1 MTR_1g055065 27.562 283 165 13 92 347 19 288 5.07e-11 63.2
MS.gene011106.t1 MTR_3g006640 25.256 293 162 12 92 346 19 292 5.12e-11 63.5
MS.gene011106.t1 MTR_4g130330 24.214 318 196 14 5 290 26 330 6.94e-11 63.5
MS.gene011106.t1 MTR_8g467670 24.167 360 236 12 3 349 31 366 7.33e-11 63.5
MS.gene011106.t1 MTR_4g023430 47.059 85 31 3 280 354 142 222 8.00e-11 61.6
MS.gene011106.t1 MTR_6g017295 26.582 237 145 10 76 286 19 252 8.54e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011106.t1 AT3G06240 26.263 396 211 16 5 348 55 421 1.18e-22 99.0
MS.gene011106.t1 AT3G23880 27.100 369 209 19 3 348 31 362 2.41e-20 91.7
MS.gene011106.t1 AT1G33530 25.743 303 156 15 2 283 113 367 1.36e-17 84.3

Find 78 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTATTCTTGTGAAATTAT+AGG 0.136987 8.3:+73720297 MS.gene011106:CDS
TAAATCATACGCATTTAATT+TGG 0.196256 8.3:-73720421 None:intergenic
GACAATGATCCTGTATCTTA+TGG 0.215985 8.3:+73720756 MS.gene011106:CDS
TCTTATGGTTTGTGGGTATT+TGG 0.244104 8.3:+73720771 MS.gene011106:CDS
GGGGCCTTTCATTGGGTTGC+TGG 0.256777 8.3:+73720648 MS.gene011106:CDS
GTAATAGTAGAGTTGAAATA+TGG 0.261887 8.3:+73720826 MS.gene011106:CDS
TATTGTTGTCTTTGATTTGA+TGG 0.268027 8.3:+73720695 MS.gene011106:CDS
TTACATCATCTATATGGTTT+TGG 0.269284 8.3:+73720441 MS.gene011106:CDS
TTGGAGAATTTCTCAGTCTA+TGG 0.269491 8.3:+73720790 MS.gene011106:CDS
AACTATAAATATCAAGAAAA+TGG 0.283409 8.3:-73721155 None:intergenic
CACCGAATTTGATTGGGATT+TGG 0.287122 8.3:-73720207 None:intergenic
CCTATAATTTCACAAGAATA+AGG 0.288506 8.3:-73720297 None:intergenic
TATGATTTACATCATCTATA+TGG 0.291159 8.3:+73720435 MS.gene011106:CDS
TCTTTAACGGGGCCTTTCAT+TGG 0.300991 8.3:+73720640 MS.gene011106:CDS
AAATGTGATAATGATCTATT+AGG 0.307012 8.3:-73720522 None:intergenic
ATCTATACACCGAATTTGAT+TGG 0.325892 8.3:-73720214 None:intergenic
TAATAGATCATTATCACATT+TGG 0.347743 8.3:+73720524 MS.gene011106:CDS
ATTAGGTAAGGTTTGATCAT+AGG 0.354289 8.3:-73720505 None:intergenic
AAGTAGGGTTATTCTTTAAC+GGG 0.378283 8.3:+73720628 MS.gene011106:CDS
AAAGTAGGGTTATTCTTTAA+CGG 0.386703 8.3:+73720627 MS.gene011106:CDS
CTTTAACGGGGCCTTTCATT+GGG 0.405882 8.3:+73720641 MS.gene011106:CDS
TGGAGCTGAAGTTCTTGATA+TGG 0.413084 8.3:-73720166 None:intergenic
AACCAAATCCCAATCAAATT+CGG 0.421631 8.3:+73720205 MS.gene011106:CDS
TCCTGTATCTTATGGTTTGT+GGG 0.429538 8.3:+73720764 MS.gene011106:CDS
TGACACAAATAAGAAGAATC+AGG 0.443772 8.3:+73721112 MS.gene011106:CDS
TCTATACACCGAATTTGATT+GGG 0.444800 8.3:-73720213 None:intergenic
TCTCATTGAGAGATAATAAG+TGG 0.449844 8.3:+73720553 MS.gene011106:CDS
ATCCTGTATCTTATGGTTTG+TGG 0.452813 8.3:+73720763 MS.gene011106:CDS
TGGAGAATTTCTCAGTCTAT+GGG 0.460881 8.3:+73720791 MS.gene011106:CDS
GCTGCTGCTGTTGTCAAAGT+AGG 0.463324 8.3:+73720612 MS.gene011106:CDS
GCATTTAATTTGGAAGCAAA+AGG 0.466974 8.3:-73720411 None:intergenic
TTGGTGAAATATAATGATAA+AGG 0.468838 8.3:+73720984 MS.gene011106:CDS
TGAAACAAAATCATGGTTAG+TGG 0.474563 8.3:-73720247 None:intergenic
CCGGTCAACAGATGATTACT+TGG 0.484079 8.3:+73720470 MS.gene011106:CDS
GTACATTTCCACGTCCCTCT+TGG 0.491456 8.3:-73721022 None:intergenic
TGTCTGTGAAATCCAGTAGC+TGG 0.491996 8.3:-73720375 None:intergenic
TACGTATGGAATCCAGCTAC+TGG 0.494188 8.3:+73720363 MS.gene011106:CDS
AGTTGAAATATGGGTGATGA+AGG 0.495178 8.3:+73720836 MS.gene011106:CDS
ACCCACAAACCATAAGATAC+AGG 0.499627 8.3:-73720765 None:intergenic
AGGATCATTGTCAAAATCAT+CGG 0.500576 8.3:-73720745 None:intergenic
GGATCATTGTCAAAATCATC+GGG 0.510836 8.3:-73720744 None:intergenic
CGAAGAATAAAATCATGGTT+GGG 0.512914 8.3:-73720270 None:intergenic
TGATAATGATCTATTAGGTA+AGG 0.515014 8.3:-73720517 None:intergenic
AATACAAACTGCATTCGTCT+TGG 0.516046 8.3:+73720859 MS.gene011106:CDS
AAACTTGCTCGAGGTCAACA+TGG 0.519992 8.3:-73721082 None:intergenic
TAATAGTAGAGTTGAAATAT+GGG 0.527607 8.3:+73720827 MS.gene011106:CDS
GCGAAGAATAAAATCATGGT+TGG 0.528879 8.3:-73720271 None:intergenic
ATTTCTCAGTCTATGGGGCA+TGG 0.529827 8.3:+73720797 MS.gene011106:CDS
TCAAATGTGTTTGTAAGTCA+TGG 0.537159 8.3:+73720058 MS.gene011106:CDS
ACTCTGTATACATGGCCACT+TGG 0.550042 8.3:-73721046 None:intergenic
GTCAACAGATGATTACTTGG+TGG 0.550600 8.3:+73720473 MS.gene011106:CDS
TTGTCTTTGATTTGATGGAA+AGG 0.551425 8.3:+73720700 MS.gene011106:CDS
TTGTCAAAATCATCGGGAAG+AGG 0.552588 8.3:-73720738 None:intergenic
GTTATGCAAACCTCTACGTA+TGG 0.553915 8.3:+73720349 MS.gene011106:CDS
TAATTTCACAAGAATAAGGT+TGG 0.555816 8.3:-73720293 None:intergenic
GTTGGCGAAGAATAAAATCA+TGG 0.561943 8.3:-73720275 None:intergenic
AAGCAAAGACTCTGTATACA+TGG 0.569727 8.3:-73721054 None:intergenic
GGTTGGGTGAAACAAAATCA+TGG 0.572847 8.3:-73720254 None:intergenic
AACTTGCTCGAGGTCAACAT+GGG 0.573047 8.3:-73721081 None:intergenic
CTGCTGCTGTTGTCAAAGTA+GGG 0.575689 8.3:+73720613 MS.gene011106:CDS
TAATAAGTGGAATCAAATTG+AGG 0.581873 8.3:+73720566 MS.gene011106:CDS
TCTAAGAGTATGTGTTGAGG+AGG 0.586763 8.3:-73720130 None:intergenic
TTAGAGTACCAAGAGGGACG+TGG 0.589431 8.3:+73721014 MS.gene011106:CDS
CCAAGTAATCATCTGTTGAC+CGG 0.599991 8.3:-73720470 None:intergenic
ACGACCAGCAACCCAATGAA+AGG 0.601816 8.3:-73720652 None:intergenic
TTGGAAGCAAAAGGAGACAA+AGG 0.603002 8.3:-73720402 None:intergenic
GAAATTATAGGTTCATGCAG+AGG 0.621843 8.3:+73720309 MS.gene011106:CDS
ATTTCTAAGAGTATGTGTTG+AGG 0.632439 8.3:-73720133 None:intergenic
GGAGAATTTCTCAGTCTATG+GGG 0.632883 8.3:+73720792 MS.gene011106:CDS
TAGCTGGATTCCATACGTAG+AGG 0.665580 8.3:-73720359 None:intergenic
ACGTGGAAATGTACGCCAAG+TGG 0.669115 8.3:+73721031 MS.gene011106:CDS
AGTAGGGTTATTCTTTAACG+GGG 0.673335 8.3:+73720629 MS.gene011106:CDS
CAGCTGTTAGAGTACCAAGA+GGG 0.686838 8.3:+73721008 MS.gene011106:CDS
GCATTGAAATAAGTAAAGTG+AGG 0.689440 8.3:-73720591 None:intergenic
CATCTTCATAAACTTGCTCG+AGG 0.702392 8.3:-73721091 None:intergenic
ACAGCTGTTAGAGTACCAAG+AGG 0.710005 8.3:+73721007 MS.gene011106:CDS
TGGTCGTAATGATTTATCAG+TGG 0.716653 8.3:+73720668 MS.gene011106:CDS
ACTTGCTCGAGGTCAACATG+GGG 0.747074 8.3:-73721080 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAATGTTATAATCAAT+AGG - chr8.3:73720903-73720922 None:intergenic 15.0%
!! TAAATCATACGCATTTAATT+TGG - chr8.3:73720424-73720443 None:intergenic 20.0%
!! TAATAGATCATTATCACATT+TGG + chr8.3:73720524-73720543 MS.gene011106:CDS 20.0%
!! TAATAGTAGAGTTGAAATAT+GGG + chr8.3:73720827-73720846 MS.gene011106:CDS 20.0%
!! TATGATTTACATCATCTATA+TGG + chr8.3:73720435-73720454 MS.gene011106:CDS 20.0%
!! TTGGTGAAATATAATGATAA+AGG + chr8.3:73720984-73721003 MS.gene011106:CDS 20.0%
!!! AAATGTGATAATGATCTATT+AGG - chr8.3:73720525-73720544 None:intergenic 20.0%
! AAAGTAGGGTTATTCTTTAA+CGG + chr8.3:73720627-73720646 MS.gene011106:CDS 25.0%
! ACAAAAAGTGGTGATATTAT+TGG + chr8.3:73720942-73720961 MS.gene011106:CDS 25.0%
! CCTATAATTTCACAAGAATA+AGG - chr8.3:73720300-73720319 None:intergenic 25.0%
! CCTTATTCTTGTGAAATTAT+AGG + chr8.3:73720297-73720316 MS.gene011106:CDS 25.0%
! GTAATAGTAGAGTTGAAATA+TGG + chr8.3:73720826-73720845 MS.gene011106:CDS 25.0%
! TAATAAGTGGAATCAAATTG+AGG + chr8.3:73720566-73720585 MS.gene011106:CDS 25.0%
! TAATTTCACAAGAATAAGGT+TGG - chr8.3:73720296-73720315 None:intergenic 25.0%
!! ACTTTTTGTAGAGTATATTG+GGG - chr8.3:73720931-73720950 None:intergenic 25.0%
!! TGATAATGATCTATTAGGTA+AGG - chr8.3:73720520-73720539 None:intergenic 25.0%
!! TTACATCATCTATATGGTTT+TGG + chr8.3:73720441-73720460 MS.gene011106:CDS 25.0%
!!! ATTTGGTTTTCTTATGTTGA+AGG - chr8.3:73720193-73720212 None:intergenic 25.0%
!!! CACTTTTTGTAGAGTATATT+GGG - chr8.3:73720932-73720951 None:intergenic 25.0%
!!! TATTGTTGTCTTTGATTTGA+TGG + chr8.3:73720695-73720714 MS.gene011106:CDS 25.0%
!!! TTTGGTTTTCTTATGTTGAA+GGG - chr8.3:73720192-73720211 None:intergenic 25.0%
AACCAAATCCCAATCAAATT+CGG + chr8.3:73720205-73720224 MS.gene011106:CDS 30.0%
AAGTAGGGTTATTCTTTAAC+GGG + chr8.3:73720628-73720647 MS.gene011106:CDS 30.0%
AGGATCATTGTCAAAATCAT+CGG - chr8.3:73720748-73720767 None:intergenic 30.0%
ATCTATACACCGAATTTGAT+TGG - chr8.3:73720217-73720236 None:intergenic 30.0%
ATTAGGTAAGGTTTGATCAT+AGG - chr8.3:73720508-73720527 None:intergenic 30.0%
CCAATATACTCTACAAAAAG+TGG + chr8.3:73720930-73720949 MS.gene011106:CDS 30.0%
CGAAGAATAAAATCATGGTT+GGG - chr8.3:73720273-73720292 None:intergenic 30.0%
GCATTGAAATAAGTAAAGTG+AGG - chr8.3:73720594-73720613 None:intergenic 30.0%
TCAAATGTGTTTGTAAGTCA+TGG + chr8.3:73720058-73720077 MS.gene011106:CDS 30.0%
TCTATACACCGAATTTGATT+GGG - chr8.3:73720216-73720235 None:intergenic 30.0%
TCTCATTGAGAGATAATAAG+TGG + chr8.3:73720553-73720572 MS.gene011106:CDS 30.0%
TGAAACAAAATCATGGTTAG+TGG - chr8.3:73720250-73720269 None:intergenic 30.0%
TGACACAAATAAGAAGAATC+AGG + chr8.3:73721112-73721131 MS.gene011106:CDS 30.0%
! AAATGTGATTTTGCAAAGTG+AGG - chr8.3:73720102-73720121 None:intergenic 30.0%
! ATTTCTAAGAGTATGTGTTG+AGG - chr8.3:73720136-73720155 None:intergenic 30.0%
!! GCATTTAATTTGGAAGCAAA+AGG - chr8.3:73720414-73720433 None:intergenic 30.0%
!! TTGTCTTTGATTTGATGGAA+AGG + chr8.3:73720700-73720719 MS.gene011106:CDS 30.0%
!!! CCACTTTTTGTAGAGTATAT+TGG - chr8.3:73720933-73720952 None:intergenic 30.0%
AAGCAAAGACTCTGTATACA+TGG - chr8.3:73721057-73721076 None:intergenic 35.0%
AATACAAACTGCATTCGTCT+TGG + chr8.3:73720859-73720878 MS.gene011106:CDS 35.0%
AGTAGGGTTATTCTTTAACG+GGG + chr8.3:73720629-73720648 MS.gene011106:CDS 35.0%
AGTTGAAATATGGGTGATGA+AGG + chr8.3:73720836-73720855 MS.gene011106:CDS 35.0%
ATCCTGTATCTTATGGTTTG+TGG + chr8.3:73720763-73720782 MS.gene011106:CDS 35.0%
GAAATTATAGGTTCATGCAG+AGG + chr8.3:73720309-73720328 MS.gene011106:CDS 35.0%
GACAATGATCCTGTATCTTA+TGG + chr8.3:73720756-73720775 MS.gene011106:CDS 35.0%
GCGAAGAATAAAATCATGGT+TGG - chr8.3:73720274-73720293 None:intergenic 35.0%
GGATCATTGTCAAAATCATC+GGG - chr8.3:73720747-73720766 None:intergenic 35.0%
GTTGGCGAAGAATAAAATCA+TGG - chr8.3:73720278-73720297 None:intergenic 35.0%
TGGAGAATTTCTCAGTCTAT+GGG + chr8.3:73720791-73720810 MS.gene011106:CDS 35.0%
TGGTCGTAATGATTTATCAG+TGG + chr8.3:73720668-73720687 MS.gene011106:CDS 35.0%
TTGGAGAATTTCTCAGTCTA+TGG + chr8.3:73720790-73720809 MS.gene011106:CDS 35.0%
! TCCTGTATCTTATGGTTTGT+GGG + chr8.3:73720764-73720783 MS.gene011106:CDS 35.0%
! TCTTATGGTTTGTGGGTATT+TGG + chr8.3:73720771-73720790 MS.gene011106:CDS 35.0%
! TGATTTTGCAAAGTGAGGAT+CGG - chr8.3:73720097-73720116 None:intergenic 35.0%
!!! AACTAGTTTTCTCTGTGGAT+TGG + chr8.3:73720965-73720984 MS.gene011106:CDS 35.0%
!!! ATTGGAACTAGTTTTCTCTG+TGG + chr8.3:73720960-73720979 MS.gene011106:CDS 35.0%
!!! TATATGGTTTTGGCTATGAC+CGG + chr8.3:73720451-73720470 MS.gene011106:CDS 35.0%
ACCCACAAACCATAAGATAC+AGG - chr8.3:73720768-73720787 None:intergenic 40.0%
CACCGAATTTGATTGGGATT+TGG - chr8.3:73720210-73720229 None:intergenic 40.0%
CCAAGTAATCATCTGTTGAC+CGG - chr8.3:73720473-73720492 None:intergenic 40.0%
GGAGAATTTCTCAGTCTATG+GGG + chr8.3:73720792-73720811 MS.gene011106:CDS 40.0%
GGTTGGGTGAAACAAAATCA+TGG - chr8.3:73720257-73720276 None:intergenic 40.0%
GTCAACAGATGATTACTTGG+TGG + chr8.3:73720473-73720492 MS.gene011106:CDS 40.0%
GTTATGCAAACCTCTACGTA+TGG + chr8.3:73720349-73720368 MS.gene011106:CDS 40.0%
TGGAGCTGAAGTTCTTGATA+TGG - chr8.3:73720169-73720188 None:intergenic 40.0%
TTGGAAGCAAAAGGAGACAA+AGG - chr8.3:73720405-73720424 None:intergenic 40.0%
TTGTCAAAATCATCGGGAAG+AGG - chr8.3:73720741-73720760 None:intergenic 40.0%
! CATCTTCATAAACTTGCTCG+AGG - chr8.3:73721094-73721113 None:intergenic 40.0%
! GGTTTTCTTATGTTGAAGGG+TGG - chr8.3:73720189-73720208 None:intergenic 40.0%
! TCTAAGAGTATGTGTTGAGG+AGG - chr8.3:73720133-73720152 None:intergenic 40.0%
ACTCTGTATACATGGCCACT+TGG - chr8.3:73721049-73721068 None:intergenic 45.0%
ATTTCTCAGTCTATGGGGCA+TGG + chr8.3:73720797-73720816 MS.gene011106:CDS 45.0%
CCGGTCAACAGATGATTACT+TGG + chr8.3:73720470-73720489 MS.gene011106:CDS 45.0%
CTGCTGCTGTTGTCAAAGTA+GGG + chr8.3:73720613-73720632 MS.gene011106:CDS 45.0%
CTTTAACGGGGCCTTTCATT+GGG + chr8.3:73720641-73720660 MS.gene011106:CDS 45.0%
TACGTATGGAATCCAGCTAC+TGG + chr8.3:73720363-73720382 MS.gene011106:CDS 45.0%
TAGCTGGATTCCATACGTAG+AGG - chr8.3:73720362-73720381 None:intergenic 45.0%
TCTTTAACGGGGCCTTTCAT+TGG + chr8.3:73720640-73720659 MS.gene011106:CDS 45.0%
TGTCTGTGAAATCCAGTAGC+TGG - chr8.3:73720378-73720397 None:intergenic 45.0%
! AAACTTGCTCGAGGTCAACA+TGG - chr8.3:73721085-73721104 None:intergenic 45.0%
! AACTTGCTCGAGGTCAACAT+GGG - chr8.3:73721084-73721103 None:intergenic 45.0%
! ACAGCTGTTAGAGTACCAAG+AGG + chr8.3:73721007-73721026 MS.gene011106:CDS 45.0%
! CAGCTGTTAGAGTACCAAGA+GGG + chr8.3:73721008-73721027 MS.gene011106:CDS 45.0%
ACGACCAGCAACCCAATGAA+AGG - chr8.3:73720655-73720674 None:intergenic 50.0%
ACGTGGAAATGTACGCCAAG+TGG + chr8.3:73721031-73721050 MS.gene011106:CDS 50.0%
ACTTGCTCGAGGTCAACATG+GGG - chr8.3:73721083-73721102 None:intergenic 50.0%
GCTGCTGCTGTTGTCAAAGT+AGG + chr8.3:73720612-73720631 MS.gene011106:CDS 50.0%
GTACATTTCCACGTCCCTCT+TGG - chr8.3:73721025-73721044 None:intergenic 50.0%
! TTAGAGTACCAAGAGGGACG+TGG + chr8.3:73721014-73721033 MS.gene011106:CDS 50.0%
! GGGGCCTTTCATTGGGTTGC+TGG + chr8.3:73720648-73720667 MS.gene011106:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 73720042 73721166 73720042 ID=MS.gene011106
chr8.3 mRNA 73720042 73721166 73720042 ID=MS.gene011106.t1;Parent=MS.gene011106
chr8.3 exon 73720042 73721166 73720042 ID=MS.gene011106.t1.exon1;Parent=MS.gene011106.t1
chr8.3 CDS 73720042 73721166 73720042 ID=cds.MS.gene011106.t1;Parent=MS.gene011106.t1
Gene Sequence

>MS.gene011106

ATGTTTCTTTTACGTGTCAAATGTGTTTGTAAGTCATGGTTTTCTCTTATATCCGATCCTCACTTTGCAAAATCACATTTTGAAGTTTCCTCCTCAACACATACTCTTAGAAATAGAATTATTACCATATCAAGAACTTCAGCTCCACCCTTCAACATAAGAAAACCAAATCCCAATCAAATTCGGTGTATAGATTTTGAAACTTCCACTAACCATGATTTTGTTTCACCCAACCATGATTTTATTCTTCGCCAACCTTATTCTTGTGAAATTATAGGTTCATGCAGAGGTTTTATATGTTTGAACAGTTATGCAAACCTCTACGTATGGAATCCAGCTACTGGATTTCACAGACAAATACCTTTGTCTCCTTTTGCTTCCAAATTAAATGCGTATGATTTACATCATCTATATGGTTTTGGCTATGACCGGTCAACAGATGATTACTTGGTGGTTTTATTGTCCTATGATCAAACCTTACCTAATAGATCATTATCACATTTGGAACTTTTCTCATTGAGAGATAATAAGTGGAATCAAATTGAGGATCCTCACTTTACTTATTTCAATGCTGCTGCTGTTGTCAAAGTAGGGTTATTCTTTAACGGGGCCTTTCATTGGGTTGCTGGTCGTAATGATTTATCAGTGGATGTTATTGTTGTCTTTGATTTGATGGAAAGGAAATTGTTAGAGATGCCTCTTCCCGATGATTTTGACAATGATCCTGTATCTTATGGTTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGGGCATGGATTTTCGTAATAGTAGAGTTGAAATATGGGTGATGAAGGAATACAAACTGCATTCGTCTTGGACTAAAACTCTTCTAATTCCTATTGATTATAACATTTTTTGCTTTTCCCCAATATACTCTACAAAAAGTGGTGATATTATTGGAACTAGTTTTCTCTGTGGATTGGTGAAATATAATGATAAAGGACAGCTGTTAGAGTACCAAGAGGGACGTGGAAATGTACGCCAAGTGGCCATGTATACAGAGTCTTTGCTTTCACCCCATGTTGACCTCGAGCAAGTTTATGAAGATGACACAAATAAGAAGAATCAGGTTTTGAAATATTCTCATTCACCATTTTCTTGA

Protein sequence

>MS.gene011106.t1

MFLLRVKCVCKSWFSLISDPHFAKSHFEVSSSTHTLRNRIITISRTSAPPFNIRKPNPNQIRCIDFETSTNHDFVSPNHDFILRQPYSCEIIGSCRGFICLNSYANLYVWNPATGFHRQIPLSPFASKLNAYDLHHLYGFGYDRSTDDYLVVLLSYDQTLPNRSLSHLELFSLRDNKWNQIEDPHFTYFNAAAVVKVGLFFNGAFHWVAGRNDLSVDVIVVFDLMERKLLEMPLPDDFDNDPVSYGLWVFGEFLSLWGMDFRNSRVEIWVMKEYKLHSSWTKTLLIPIDYNIFCFSPIYSTKSGDIIGTSFLCGLVKYNDKGQLLEYQEGRGNVRQVAMYTESLLSPHVDLEQVYEDDTNKKNQVLKYSHSPFS