AlfalfaGEDB | MS.gene35068

M. sativa cultivar XinJiangDaYe / MS.gene35068

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35068.t1	XP_013457251.1	79.9	134	25	1	1	132	231	364	6.90E-54	219.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35068.t1	A0A072UNK5	79.9	134	25	1	1	132	231	364	4.9e-54	219.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene063826	MS.gene35068	PPI
MS.gene44892	MS.gene35068	PPI
MS.gene35068	MS.gene041470	PPI
MS.gene35068	MS.gene58319	PPI
MS.gene35068	MS.gene034762	PPI
MS.gene35068	MS.gene71159	PPI
MS.gene35068	MS.gene59943	PPI
MS.gene35068	MS.gene033441	PPI
MS.gene000038	MS.gene35068	PPI
MS.gene064111	MS.gene35068	PPI
MS.gene35068	MS.gene033442	PPI
MS.gene35068	MS.gene060366	PPI
MS.gene025887	MS.gene35068	PPI
MS.gene35068	MS.gene44428	PPI
MS.gene35068	MS.gene96407	PPI
MS.gene35068	MS.gene058694	PPI
MS.gene35068	MS.gene035235	PPI
MS.gene35068	MS.gene058703	PPI
MS.gene35068	MS.gene033432	PPI
MS.gene35068	MS.gene50329	PPI
MS.gene35068	MS.gene57528	PPI
MS.gene006710	MS.gene35068	PPI
MS.gene35068	MS.gene045476	PPI
MS.gene35068	MS.gene024000	PPI
MS.gene35068	MS.gene012215	PPI
MS.gene44885	MS.gene35068	PPI
MS.gene011679	MS.gene35068	PPI
MS.gene35068	MS.gene033079	PPI
MS.gene35068	MS.gene059101	PPI
MS.gene35068	MS.gene033444	PPI
MS.gene35068	MS.gene035236	PPI
MS.gene35068	MS.gene58316	PPI
MS.gene35068	MS.gene033430	PPI
MS.gene35068	MS.gene58321	PPI
MS.gene35068	MS.gene016524	PPI
MS.gene35068	MS.gene87564	PPI
MS.gene35068	MS.gene58315	PPI
MS.gene35068	MS.gene36595	PPI
MS.gene35068	MS.gene045140	PPI
MS.gene35068	MS.gene041473	PPI
MS.gene35068	MS.gene50311	PPI
MS.gene35068	MS.gene064112	PPI
MS.gene35068	MS.gene058989	PPI
MS.gene017412	MS.gene35068	PPI
MS.gene35068	MS.gene036556	PPI
MS.gene57529	MS.gene35068	PPI
MS.gene35068	MS.gene57538	PPI
MS.gene35068	MS.gene041468	PPI
MS.gene35068	MS.gene060367	PPI
MS.gene35068	MS.gene058693	PPI
MS.gene35068	MS.gene27319	PPI
MS.gene35068	MS.gene64001	PPI
MS.gene35068	MS.gene015089	PPI
MS.gene35068	MS.gene041395	PPI
MS.gene009883	MS.gene35068	PPI
MS.gene35068	MS.gene066641	PPI
MS.gene35068	MS.gene51189	PPI
MS.gene35068	MS.gene046958	PPI
MS.gene35068	MS.gene24286	PPI
MS.gene35068	MS.gene066635	PPI
MS.gene27020	MS.gene35068	PPI
MS.gene35068	MS.gene90744	PPI
MS.gene066620	MS.gene35068	PPI
MS.gene35068	MS.gene58783	PPI
MS.gene35068	MS.gene036760	PPI
MS.gene35068	MS.gene40988	PPI
MS.gene35068	MS.gene27283	PPI
MS.gene35068	MS.gene24173	PPI
MS.gene35068	MS.gene036584	PPI
MS.gene35068	MS.gene036662	PPI
MS.gene35068	MS.gene58311	PPI
MS.gene35068	MS.gene88776	PPI
MS.gene35068	MS.gene42451	PPI
MS.gene35068	MS.gene035261	PPI
MS.gene51204	MS.gene35068	PPI
MS.gene35068	MS.gene023999	PPI
MS.gene35068	MS.gene070461	PPI
MS.gene036557	MS.gene35068	PPI
MS.gene35068	MS.gene69307	PPI
MS.gene35068	MS.gene59639	PPI
MS.gene35068	MS.gene036581	PPI
MS.gene35068	MS.gene019507	PPI
MS.gene35068	MS.gene033431	PPI
MS.gene84698	MS.gene35068	PPI
MS.gene35068	MS.gene058692	PPI
MS.gene35068	MS.gene000036	PPI
MS.gene35068	MS.gene50320	PPI
MS.gene82082	MS.gene35068	PPI
MS.gene35068	MS.gene58314	PPI
MS.gene35068	MS.gene87557	PPI
MS.gene35068	MS.gene51199	PPI
MS.gene35068	MS.gene035263	PPI
MS.gene35068	MS.gene67501	PPI
MS.gene35068	MS.gene96406	PPI
MS.gene35068	MS.gene27285	PPI
MS.gene35068	MS.gene035262	PPI
MS.gene35068	MS.gene77857	PPI
MS.gene57535	MS.gene35068	PPI
MS.gene35068	MS.gene028390	PPI
MS.gene35068	MS.gene40878	PPI
MS.gene35068	MS.gene57526	PPI
MS.gene35068	MS.gene069075	PPI
MS.gene58311	MS.gene35068	PPI
MS.gene35068	MS.gene051820	PPI
MS.gene35068	MS.gene064091	PPI
MS.gene35068	MS.gene047279	PPI
MS.gene35068	MS.gene060370	PPI
MS.gene35068	MS.gene50305	PPI
MS.gene35068	MS.gene024002	PPI
MS.gene35068	MS.gene032969	PPI
MS.gene35068	MS.gene68890	PPI
MS.gene35068	MS.gene041392	PPI
MS.gene35068	MS.gene50297	PPI
MS.gene35068	MS.gene42445	PPI
MS.gene35068	MS.gene86273	PPI
MS.gene35068	MS.gene26830	PPI
MS.gene35068	MS.gene40985	PPI
MS.gene35068	MS.gene22715	PPI
MS.gene35068	MS.gene038756	PPI
MS.gene35068	MS.gene92376	PPI
MS.gene35068	MS.gene51207	PPI
MS.gene35068	MS.gene57529	PPI
MS.gene35068	MS.gene63657	PPI
MS.gene35068	MS.gene059157	PPI
MS.gene35068	MS.gene57527	PPI
MS.gene35068	MS.gene024004	PPI
MS.gene35068	MS.gene070462	PPI
MS.gene35068	MS.gene061240	PPI
MS.gene35068	MS.gene54049	PPI
MS.gene35068	MS.gene036582	PPI
MS.gene35068	MS.gene031590	PPI
MS.gene35068	MS.gene033427	PPI
MS.gene35068	MS.gene88780	PPI
MS.gene35068	MS.gene064086	PPI
MS.gene35068	MS.gene035234	PPI
MS.gene35068	MS.gene50326	PPI
MS.gene063414	MS.gene35068	PPI
MS.gene35068	MS.gene034686	PPI
MS.gene35068	MS.gene41046	PPI
MS.gene35068	MS.gene066639	PPI
MS.gene35068	MS.gene50332	PPI
MS.gene35068	MS.gene42447	PPI
MS.gene35068	MS.gene77856	PPI
MS.gene35068	MS.gene024979	PPI
MS.gene35068	MS.gene041475	PPI
MS.gene35068	MS.gene43789	PPI
MS.gene35068	MS.gene64203	PPI
MS.gene35068	MS.gene24826	PPI
MS.gene26957	MS.gene35068	PPI
MS.gene35068	MS.gene40904	PPI
MS.gene35068	MS.gene044425	PPI
MS.gene35068	MS.gene43790	PPI
MS.gene35068	MS.gene032970	PPI
MS.gene35068	MS.gene57537	PPI
MS.gene35068	MS.gene064104	PPI
MS.gene35068	MS.gene81242	PPI
MS.gene35068	MS.gene59637	PPI
MS.gene58781	MS.gene35068	PPI
MS.gene35068	MS.gene033426	PPI
MS.gene35068	MS.gene27022	PPI
MS.gene35068	MS.gene57530	PPI
MS.gene35068	MS.gene97996	PPI
MS.gene35068	MS.gene87585	PPI
MS.gene35068	MS.gene041390	PPI
MS.gene35068	MS.gene024009	PPI
MS.gene35068	MS.gene036599	PPI
MS.gene000035	MS.gene35068	PPI
MS.gene35068	MS.gene40887	PPI
MS.gene35068	MS.gene87200	PPI
MS.gene87569	MS.gene35068	PPI
MS.gene35068	MS.gene42444	PPI
MS.gene35068	MS.gene67687	PPI
MS.gene35068	MS.gene62398	PPI
MS.gene35068	MS.gene26101	PPI
MS.gene87573	MS.gene35068	PPI
MS.gene041491	MS.gene35068	PPI
MS.gene35068	MS.gene006705	PPI
MS.gene35068	MS.gene80884	PPI
MS.gene35068	MS.gene061241	PPI
MS.gene019504	MS.gene35068	PPI
MS.gene35068	MS.gene035237	PPI
MS.gene059096	MS.gene35068	PPI
MS.gene35068	MS.gene44886	PPI
MS.gene35068	MS.gene50309	PPI
MS.gene35068	MS.gene041394	PPI
MS.gene35068	MS.gene059156	PPI
MS.gene35068	MS.gene03060	PPI
MS.gene35068	MS.gene036664	PPI
MS.gene35068	MS.gene053257	PPI
MS.gene35068	MS.gene58241	PPI
MS.gene35068	MS.gene010758	PPI
MS.gene034690	MS.gene35068	PPI
MS.gene35068	MS.gene77858	PPI
MS.gene35068	MS.gene51201	PPI
MS.gene26949	MS.gene35068	PPI
MS.gene35068	MS.gene058696	PPI
MS.gene35068	MS.gene009893	PPI
MS.gene35068	MS.gene045475	PPI
MS.gene35068	MS.gene63655	PPI
MS.gene35068	MS.gene50336	PPI
MS.gene35068	MS.gene39262	PPI
MS.gene35068	MS.gene87586	PPI
MS.gene35068	MS.gene77704	PPI
MS.gene35068	MS.gene019505	PPI
MS.gene35068	MS.gene58320	PPI
MS.gene35068	MS.gene033083	PPI
MS.gene35068	MS.gene75875	PPI
MS.gene50298	MS.gene35068	PPI
MS.gene35068	MS.gene63658	PPI
MS.gene35068	MS.gene60027	PPI
MS.gene35068	MS.gene033081	PPI
MS.gene35068	MS.gene036663	PPI
MS.gene35068	MS.gene68580	PPI
MS.gene35068	MS.gene072177	PPI
MS.gene35068	MS.gene57525	PPI
MS.gene019506	MS.gene35068	PPI
MS.gene35068	MS.gene023996	PPI
MS.gene35068	MS.gene030114	PPI
MS.gene35068	MS.gene58716	PPI
MS.gene35068	MS.gene045473	PPI
MS.gene35068	MS.gene50301	PPI
MS.gene35068	MS.gene88774	PPI
MS.gene69309	MS.gene35068	PPI
MS.gene35068	MS.gene045474	PPI
MS.gene35068	MS.gene036558	PPI
MS.gene35068	MS.gene041474	PPI
MS.gene35068	MS.gene40984	PPI
MS.gene35068	MS.gene066623	PPI
MS.gene35068	MS.gene064108	PPI
MS.gene35068	MS.gene064090	PPI
MS.gene35068	MS.gene24208	PPI
MS.gene35068	MS.gene58317	PPI
MS.gene35068	MS.gene90742	PPI
MS.gene35068	MS.gene24212	PPI
MS.gene35068	MS.gene51191	PPI
MS.gene35068	MS.gene40902	PPI
MS.gene35068	MS.gene58240	PPI
MS.gene35068	MS.gene96448	PPI
MS.gene35068	MS.gene063472	PPI
MS.gene35068	MS.gene025887	PPI
MS.gene35068	MS.gene57717	PPI
MS.gene35068	MS.gene034680	PPI
MS.gene35068	MS.gene31587	PPI
MS.gene35068	MS.gene27021	PPI
MS.gene35068	MS.gene51208	PPI
MS.gene35068	MS.gene044563	PPI
MS.gene35068	MS.gene50327	PPI
MS.gene35068	MS.gene066626	PPI
MS.gene35068	MS.gene40982	PPI
MS.gene35068	MS.gene50339	PPI
MS.gene35068	MS.gene063474	PPI
MS.gene51202	MS.gene35068	PPI
MS.gene35068	MS.gene51190	PPI
MS.gene35068	MS.gene42452	PPI
MS.gene35068	MS.gene58785	PPI
MS.gene35068	MS.gene044426	PPI
MS.gene35068	MS.gene88416	PPI
MS.gene35068	MS.gene034681	PPI
MS.gene35068	MS.gene84698	PPI
MS.gene35068	MS.gene57532	PPI
MS.gene35068	MS.gene003076	PPI
MS.gene35068	MS.gene009892	PPI
MS.gene35068	MS.gene87559	PPI
MS.gene35068	MS.gene058669	PPI
MS.gene35068	MS.gene066120	PPI
MS.gene35068	MS.gene51192	PPI
MS.gene35068	MS.gene51188	PPI
MS.gene35068	MS.gene033875	PPI
MS.gene35068	MS.gene041489	PPI
MS.gene35068	MS.gene38220	PPI
MS.gene35068	MS.gene40986	PPI
MS.gene58722	MS.gene35068	PPI
MS.gene35068	MS.gene36704	PPI
MS.gene35068	MS.gene034688	PPI
MS.gene35068	MS.gene58239	PPI
MS.gene35068	MS.gene24213	PPI
MS.gene35068	MS.gene033440	PPI
MS.gene35068	MS.gene31637	PPI
MS.gene35068	MS.gene024011	PPI
MS.gene43796	MS.gene35068	PPI
MS.gene35068	MS.gene034677	PPI
MS.gene35068	MS.gene064109	PPI
MS.gene35068	MS.gene055694	PPI
MS.gene35068	MS.gene035238	PPI
MS.gene35068	MS.gene85043	PPI
MS.gene35068	MS.gene064114	PPI
MS.gene35068	MS.gene87584	PPI
MS.gene35068	MS.gene87563	PPI
MS.gene35068	MS.gene062698	PPI
MS.gene35068	MS.gene26829	PPI
MS.gene58313	MS.gene35068	PPI
MS.gene35068	MS.gene80610	PPI
MS.gene066622	MS.gene35068	PPI
MS.gene35068	MS.gene90743	PPI
MS.gene44883	MS.gene35068	PPI
MS.gene35068	MS.gene053256	PPI
MS.gene35068	MS.gene40886	PPI
MS.gene35068	MS.gene85454	PPI
MS.gene87588	MS.gene35068	PPI
MS.gene35068	MS.gene041391	PPI
MS.gene35068	MS.gene033443	PPI
MS.gene35068	MS.gene036583	PPI
MS.gene35068	MS.gene006711	PPI
MS.gene35068	MS.gene57536	PPI
MS.gene35068	MS.gene50307	PPI
MS.gene35068	MS.gene51200	PPI
MS.gene35068	MS.gene021553	PPI
MS.gene35068	MS.gene011106	PPI
MS.gene35068	MS.gene44887	PPI
MS.gene35068	MS.gene058701	PPI
MS.gene35068	MS.gene87554	PPI
MS.gene35068	MS.gene009891	PPI
MS.gene35068	MS.gene064083	PPI
MS.gene031591	MS.gene35068	PPI
MS.gene35068	MS.gene27051	PPI
MS.gene35068	MS.gene048193	PPI
MS.gene35068	MS.gene58312	PPI
MS.gene35068	MS.gene87562	PPI
MS.gene35068	MS.gene024420	PPI
MS.gene35068	MS.gene016220	PPI
MS.gene35068	MS.gene57533	PPI
MS.gene35068	MS.gene024008	PPI
MS.gene35068	MS.gene50337	PPI
MS.gene35068	MS.gene063670	PPI
MS.gene35068	MS.gene54541	PPI
MS.gene35068	MS.gene39265	PPI
MS.gene96126	MS.gene35068	PPI
MS.gene35068	MS.gene50306	PPI
MS.gene35068	MS.gene041393	PPI
MS.gene35068	MS.gene060368	PPI
MS.gene87559	MS.gene35068	PPI
MS.gene35068	MS.gene053299	PPI
MS.gene35068	MS.gene28758	PPI
MS.gene35068	MS.gene044429	PPI
MS.gene35068	MS.gene57531	PPI
MS.gene35068	MS.gene50304	PPI
MS.gene35068	MS.gene27284	PPI
MS.gene35068	MS.gene041388	PPI
MS.gene35068	MS.gene019503	PPI
MS.gene35068	MS.gene48221	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35068.t1	MTR_4g094365	79.851	134	25	1	1	132	231	364	5.79e-70	214
MS.gene35068.t1	MTR_8g433040	61.364	132	49	1	1	132	235	364	1.58e-47	156
MS.gene35068.t1	MTR_8g032380	61.364	132	49	1	1	132	235	364	1.58e-47	156
MS.gene35068.t1	MTR_8g433030	62.992	127	44	2	1	126	212	336	4.50e-46	152
MS.gene35068.t1	MTR_8g032390	62.992	127	44	2	1	126	245	369	1.30e-45	152
MS.gene35068.t1	MTR_4g122850	58.209	134	53	3	1	132	232	364	1.68e-45	152
MS.gene35068.t1	MTR_4g116330	55.556	135	57	2	1	132	246	380	2.98e-43	146
MS.gene35068.t1	MTR_6g060650	56.061	132	55	2	1	131	243	372	1.31e-42	144
MS.gene35068.t1	MTR_3g103020	55.639	133	58	1	1	132	246	378	6.83e-42	142
MS.gene35068.t1	MTR_4g109280	57.778	135	51	4	1	132	228	359	1.07e-41	141
MS.gene35068.t1	MTR_8g040935	54.478	134	58	2	2	132	75	208	1.72e-41	137
MS.gene35068.t1	MTR_4g109270	55.639	133	58	1	1	132	232	364	8.14e-41	139
MS.gene35068.t1	MTR_4g116320	54.962	131	56	2	1	129	126	255	1.92e-40	135
MS.gene35068.t1	MTR_4g117780	58.036	112	46	1	22	132	256	367	4.53e-36	127
MS.gene35068.t1	MTR_4g117870	51.562	128	61	1	5	132	141	267	4.88e-36	124
MS.gene35068.t1	MTR_4g117770	58.036	112	46	1	22	132	256	367	5.25e-36	127
MS.gene35068.t1	MTR_4g117810	58.036	112	46	1	22	132	256	367	5.25e-36	127
MS.gene35068.t1	MTR_4g023130	54.135	133	55	4	1	131	184	312	9.50e-36	125
MS.gene35068.t1	MTR_3g034180	53.383	133	58	3	1	132	360	489	9.87e-36	128
MS.gene35068.t1	MTR_4g117720	52.273	132	55	4	1	126	242	371	1.11e-35	126
MS.gene35068.t1	MTR_4g117850	53.968	126	56	2	2	125	248	373	7.36e-35	124
MS.gene35068.t1	MTR_4g023080	52.632	133	57	4	1	131	225	353	2.65e-34	122
MS.gene35068.t1	MTR_4g118360	51.163	129	54	5	8	131	1	125	7.18e-34	115
MS.gene35068.t1	MTR_4g023380	45.860	157	58	5	1	132	225	379	1.13e-33	120
MS.gene35068.t1	MTR_4g122860	52.344	128	53	3	10	132	196	320	1.68e-33	119
MS.gene35068.t1	MTR_5g097210	52.344	128	59	1	2	129	235	360	6.13e-33	119
MS.gene35068.t1	MTR_4g023090	47.183	142	56	5	1	126	240	378	7.92e-33	119
MS.gene35068.t1	MTR_1g055175	46.970	132	68	2	1	131	70	200	1.02e-32	114
MS.gene35068.t1	MTR_5g023000	55.556	99	43	1	35	132	1	99	1.59e-32	110
MS.gene35068.t1	MTR_4g118370	50.769	130	59	3	1	129	132	257	2.59e-32	114
MS.gene35068.t1	MTR_4g117750	55.556	108	47	1	24	130	374	481	1.54e-31	116
MS.gene35068.t1	MTR_4g117750	46.281	121	60	3	12	131	242	358	2.11e-24	97.1
MS.gene35068.t1	MTR_4g116330	54.955	111	47	2	25	132	231	341	2.46e-31	114
MS.gene35068.t1	MTR_1g055165	46.970	132	68	2	1	131	187	317	2.71e-31	113
MS.gene35068.t1	MTR_4g021785	48.529	136	60	4	1	132	226	355	3.85e-31	114
MS.gene35068.t1	MTR_4g023070	46.528	144	61	4	2	131	228	369	4.28e-31	114
MS.gene35068.t1	MTR_1g055195	50.781	128	58	3	1	126	348	472	4.96e-31	115
MS.gene35068.t1	MTR_6g463430	50.000	134	60	4	1	132	74	202	9.59e-31	109
MS.gene35068.t1	MTR_3g034160	53.788	132	57	3	1	131	246	374	1.71e-30	112
MS.gene35068.t1	MTR_4g023120	45.270	148	59	4	2	132	228	370	6.06e-30	110
MS.gene35068.t1	MTR_3g034130	52.252	111	50	2	1	110	246	354	1.19e-29	110
MS.gene35068.t1	MTR_1g055135	47.059	136	65	4	1	131	241	374	7.11e-29	108
MS.gene35068.t1	MTR_4g023190	46.715	137	62	6	1	130	225	357	1.64e-28	107
MS.gene35068.t1	MTR_5g070080	47.619	126	64	2	2	126	255	379	2.53e-28	107
MS.gene35068.t1	MTR_4g023200	46.715	137	62	6	1	130	226	358	3.49e-28	106
MS.gene35068.t1	MTR_5g070130	46.094	128	67	2	1	126	243	370	8.23e-28	105
MS.gene35068.t1	MTR_4g023150	45.985	137	63	6	1	130	226	358	3.82e-27	103
MS.gene35068.t1	MTR_4g118380	47.826	115	48	3	1	105	245	357	5.31e-27	102
MS.gene35068.t1	MTR_4g117530	51.376	109	47	3	25	132	150	253	2.49e-26	99.4
MS.gene35068.t1	MTR_7g079450	45.455	132	66	4	2	132	11	137	4.92e-26	95.5
MS.gene35068.t1	MTR_4g118400	45.238	126	54	3	2	126	183	294	1.23e-25	98.2
MS.gene35068.t1	MTR_8g102520	45.522	134	67	4	2	132	192	322	2.87e-25	97.8
MS.gene35068.t1	MTR_4g023440	57.447	94	35	3	41	132	242	332	7.97e-25	96.7
MS.gene35068.t1	MTR_5g070088	42.969	128	71	2	1	126	252	379	1.23e-23	94.4
MS.gene35068.t1	MTR_1g055250	46.667	105	54	2	2	106	140	242	1.79e-23	93.2
MS.gene35068.t1	MTR_7g079400	42.754	138	69	5	2	132	203	337	4.45e-21	86.7
MS.gene35068.t1	MTR_4g114700	52.874	87	37	2	41	123	132	218	1.77e-19	81.3
MS.gene35068.t1	MTR_4g121580	40.458	131	63	5	4	131	230	348	2.50e-18	79.7
MS.gene35068.t1	MTR_7g117720	54.651	86	34	3	46	126	186	271	3.35e-18	78.2
MS.gene35068.t1	MTR_4g122840	38.462	130	45	3	4	132	169	264	5.09e-18	77.8
MS.gene35068.t1	MTR_8g013005	62.712	59	22	0	74	132	1	59	1.58e-17	71.6
MS.gene35068.t1	MTR_4g023430	53.659	82	32	3	56	132	142	222	8.47e-17	73.6
MS.gene35068.t1	MTR_7g079370	41.085	129	67	5	2	126	227	350	3.43e-16	73.6
MS.gene35068.t1	MTR_8g098830	43.396	106	54	4	2	105	97	198	5.70e-16	71.6
MS.gene35068.t1	MTR_7g079420	39.231	130	70	5	2	126	1013	1138	2.94e-15	71.2
MS.gene35068.t1	MTR_4g023100	57.895	57	22	1	76	132	65	119	3.82e-14	64.3
MS.gene35068.t1	MTR_4g109290	62.264	53	20	0	80	132	136	188	2.78e-12	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 27 sgRNAs with CRISPR-Local

Find 35 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATCTTGGTTCGTGGGTATT+TGG	0.245938	4.4:+20383963	MS.gene35068:CDS
ATAGCCGTACACTTAAAATA+TGG	0.266688	4.4:+20384018	MS.gene35068:CDS
TAAACTTGCTCTCTATCAAC+AGG	0.362152	4.4:-20384281	None:intergenic
CACGATGGTCCTGCATATCT+TGG	0.377345	4.4:+20383948	MS.gene35068:CDS
ATTGGATCAGACGGTGGTCT+TGG	0.412575	4.4:+20384152	MS.gene35068:CDS
ACTGTAAACTGCATCCATCT+TGG	0.469118	4.4:+20384051	MS.gene35068:CDS
TCGTGATAATCATCTGGAAC+AGG	0.478738	4.4:-20383930	None:intergenic
TTGCCTTTAATTTAATGGAA+AGG	0.482467	4.4:+20383892	None:intergenic
GTCCTGCATATCTTGGTTCG+TGG	0.485547	4.4:+20383955	MS.gene35068:CDS
GGACCATCGTGATAATCATC+TGG	0.487786	4.4:-20383936	None:intergenic
TTGGTGAAGTATAATGATAA+AGG	0.492510	4.4:+20384176	MS.gene35068:CDS
TAGCCGTACACTTAAAATAT+GGG	0.498718	4.4:+20384019	MS.gene35068:CDS
CTCTGTATACACGATCGCTT+GGG	0.514295	4.4:-20384243	None:intergenic
ACTCTGTATACACGATCGCT+TGG	0.527545	4.4:-20384244	None:intergenic
ACAAGAGTCTTAGTCCAAGA+TGG	0.541795	4.4:-20384065	None:intergenic
ATCAGACGGTGGTCTTGGAT+TGG	0.544899	4.4:+20384157	MS.gene35068:CDS
ACCCACGAACCAAGATATGC+AGG	0.553874	4.4:-20383957	None:intergenic
TCCTGCATATCTTGGTTCGT+GGG	0.554694	4.4:+20383956	MS.gene35068:CDS
GGGACCTAAGTGGATAGTTA+CGG	0.559472	4.4:-20384223	None:intergenic
GGTGATATTATTGGATCAGA+CGG	0.605256	4.4:+20384143	MS.gene35068:CDS
TAGAGGGGAAAATATGCGAA+TGG	0.624574	4.4:-20384105	None:intergenic
CCTACCGTAACTATCCACTT+AGG	0.631176	4.4:+20384219	MS.gene35068:CDS
ACGATCGCTTGGGACCTAAG+TGG	0.637531	4.4:-20384233	None:intergenic
CCTAAGTGGATAGTTACGGT+AGG	0.679593	4.4:-20384219	None:intergenic
GTTCCAGATGATTATCACGA+TGG	0.682457	4.4:+20383933	MS.gene35068:CDS
GATATTATTGGATCAGACGG+TGG	0.700053	4.4:+20384146	MS.gene35068:CDS
AAACTTGCTCTCTATCAACA+GGG	0.707501	4.4:-20384280	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ACAAAAAGTGGTGATATTAT+TGG	+	chr4.4:20384134-20384153	MS.gene35068:CDS	25.0%
!	TTGGTGAAGTATAATGATAA+AGG	+	chr4.4:20384176-20384195	MS.gene35068:CDS	25.0%
	ATAGCCGTACACTTAAAATA+TGG	+	chr4.4:20384018-20384037	MS.gene35068:CDS	30.0%
	TAGCCGTACACTTAAAATAT+GGG	+	chr4.4:20384019-20384038	MS.gene35068:CDS	30.0%
!	ACTTTTTGTAGAACATAGAG+GGG	-	chr4.4:20384123-20384142	None:intergenic	30.0%
!!	CACTTTTTGTAGAACATAGA+GGG	-	chr4.4:20384124-20384143	None:intergenic	30.0%
!!	TCACCCATATTTTAAGTGTA+CGG	-	chr4.4:20384025-20384044	None:intergenic	30.0%
!!	TGGAGAATTTTTCAGTCTAT+GGG	+	chr4.4:20383983-20384002	MS.gene35068:CDS	30.0%
!!	TTGGAGAATTTTTCAGTCTA+TGG	+	chr4.4:20383982-20384001	MS.gene35068:CDS	30.0%
	CCTCTATGTTCTACAAAAAG+TGG	+	chr4.4:20384122-20384141	MS.gene35068:CDS	35.0%
	GGTGATATTATTGGATCAGA+CGG	+	chr4.4:20384143-20384162	MS.gene35068:CDS	35.0%
!	AAACTTGCTCTCTATCAACA+GGG	-	chr4.4:20384283-20384302	None:intergenic	35.0%
!	TAAACTTGCTCTCTATCAAC+AGG	-	chr4.4:20384284-20384303	None:intergenic	35.0%
!!	ATTTTTCAGTCTATGGGCTA+TGG	+	chr4.4:20383989-20384008	MS.gene35068:CDS	35.0%
!!!	CCACTTTTTGTAGAACATAG+AGG	-	chr4.4:20384125-20384144	None:intergenic	35.0%
	ACAAGAGTCTTAGTCCAAGA+TGG	-	chr4.4:20384068-20384087	None:intergenic	40.0%
	ACTGTAAACTGCATCCATCT+TGG	+	chr4.4:20384051-20384070	MS.gene35068:CDS	40.0%
	GATATTATTGGATCAGACGG+TGG	+	chr4.4:20384146-20384165	MS.gene35068:CDS	40.0%
	GTTCCAGATGATTATCACGA+TGG	+	chr4.4:20383933-20383952	MS.gene35068:CDS	40.0%
	TAGAGGGGAAAATATGCGAA+TGG	-	chr4.4:20384108-20384127	None:intergenic	40.0%
!	TATCTTGGTTCGTGGGTATT+TGG	+	chr4.4:20383963-20383982	MS.gene35068:CDS	40.0%
!	TCGTGATAATCATCTGGAAC+AGG	-	chr4.4:20383933-20383952	None:intergenic	40.0%
	ACTCTGTATACACGATCGCT+TGG	-	chr4.4:20384247-20384266	None:intergenic	45.0%
	CCTAAGTGGATAGTTACGGT+AGG	-	chr4.4:20384222-20384241	None:intergenic	45.0%
	CCTACCGTAACTATCCACTT+AGG	+	chr4.4:20384219-20384238	MS.gene35068:CDS	45.0%
	CTCTGTATACACGATCGCTT+GGG	-	chr4.4:20384246-20384265	None:intergenic	45.0%
	GGACCATCGTGATAATCATC+TGG	-	chr4.4:20383939-20383958	None:intergenic	45.0%
	GGGACCTAAGTGGATAGTTA+CGG	-	chr4.4:20384226-20384245	None:intergenic	45.0%
!	TCCTGCATATCTTGGTTCGT+GGG	+	chr4.4:20383956-20383975	MS.gene35068:CDS	45.0%
	ACCCACGAACCAAGATATGC+AGG	-	chr4.4:20383960-20383979	None:intergenic	50.0%
	ATTGGATCAGACGGTGGTCT+TGG	+	chr4.4:20384152-20384171	MS.gene35068:CDS	50.0%
	CACGATGGTCCTGCATATCT+TGG	+	chr4.4:20383948-20383967	MS.gene35068:CDS	50.0%
!	ATCAGACGGTGGTCTTGGAT+TGG	+	chr4.4:20384157-20384176	MS.gene35068:CDS	50.0%
!	GTCCTGCATATCTTGGTTCG+TGG	+	chr4.4:20383955-20383974	MS.gene35068:CDS	50.0%
	ACGATCGCTTGGGACCTAAG+TGG	-	chr4.4:20384236-20384255	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	20383906	20384304	20383906	ID=MS.gene35068
chr4.4	mRNA	20383906	20384304	20383906	ID=MS.gene35068.t1;Parent=MS.gene35068
chr4.4	exon	20383906	20384304	20383906	ID=MS.gene35068.t1.exon1;Parent=MS.gene35068.t1
chr4.4	CDS	20383906	20384304	20383906	ID=cds.MS.gene35068.t1;Parent=MS.gene35068.t1

Gene Sequence

>MS.gene35068

ATGGAAAGGAAACTGTTAGAGATACCTGTTCCAGATGATTATCACGATGGTCCTGCATATCTTGGTTCGTGGGTATTTGGAGAATTTTTCAGTCTATGGGCTATGGATCATTATAGCCGTACACTTAAAATATGGGTGATGAATGACTGTAAACTGCATCCATCTTGGACTAAGACTCTTGTTGTTCGTATTGATGATGCCATTCGCATATTTTCCCCTCTATGTTCTACAAAAAGTGGTGATATTATTGGATCAGACGGTGGTCTTGGATTGGTGAAGTATAATGATAAAGGACAACTCTTAGAGTATTGCGCCTACCGTAACTATCCACTTAGGTCCCAAGCGATCGTGTATACAGAGTCTCTGCTTTCACTCCCTGTTGATAGAGAGCAAGTTTAA

Protein sequence

>MS.gene35068.t1

MERKLLEIPVPDDYHDGPAYLGSWVFGEFFSLWAMDHYSRTLKIWVMNDCKLHPSWTKTLVVRIDDAIRIFSPLCSTKSGDIIGSDGGLGLVKYNDKGQLLEYCAYRNYPLRSQAIVYTESLLSLPVDREQV