AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024002


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024002.t1 MTR_7g079370 93.491 338 22 0 38 375 16 353 0.0 657
MS.gene024002.t1 MTR_5g069120 89.326 178 19 0 19 196 1 178 4.49e-114 330
MS.gene024002.t1 MTR_2g048580 48.168 382 145 12 3 375 2 339 8.90e-103 307
MS.gene024002.t1 MTR_8g102520 48.800 375 131 9 4 375 3 319 4.32e-97 292
MS.gene024002.t1 MTR_7g079400 52.978 319 122 9 70 374 29 333 1.18e-96 291
MS.gene024002.t1 MTR_3g103020 44.737 380 183 11 1 372 12 372 4.36e-86 266
MS.gene024002.t1 MTR_6g060650 46.859 382 175 11 3 372 2 367 1.17e-84 262
MS.gene024002.t1 MTR_3g034180 43.377 385 189 10 1 372 115 483 1.33e-83 263
MS.gene024002.t1 MTR_3g034160 43.896 385 187 10 1 372 1 369 9.72e-81 252
MS.gene024002.t1 MTR_4g023080 42.133 375 182 11 3 371 2 347 2.28e-80 250
MS.gene024002.t1 MTR_4g109280 44.792 384 168 14 3 373 2 354 2.50e-79 248
MS.gene024002.t1 MTR_3g034130 42.424 363 184 7 1 351 1 350 3.98e-79 248
MS.gene024002.t1 MTR_5g070080 41.855 399 186 14 2 374 3 381 9.36e-79 247
MS.gene024002.t1 MTR_4g116330 43.077 390 173 15 2 372 15 374 7.71e-78 244
MS.gene024002.t1 MTR_5g070130 42.597 385 191 12 3 374 5 372 3.11e-77 243
MS.gene024002.t1 MTR_4g094365 43.045 381 182 15 3 372 2 358 4.17e-77 242
MS.gene024002.t1 MTR_4g117720 42.782 381 157 11 3 374 45 373 3.05e-76 240
MS.gene024002.t1 MTR_4g021785 40.426 376 191 10 1 371 1 348 4.95e-76 239
MS.gene024002.t1 MTR_1g055135 42.246 374 197 8 8 375 12 372 2.46e-75 238
MS.gene024002.t1 MTR_5g070088 41.457 398 172 12 12 374 10 381 3.56e-75 238
MS.gene024002.t1 MTR_4g117850 42.667 375 181 12 8 371 22 373 1.07e-74 236
MS.gene024002.t1 MTR_4g109270 43.717 382 178 13 3 372 2 358 1.43e-74 236
MS.gene024002.t1 MTR_4g023090 39.594 394 190 13 3 372 9 378 2.51e-74 236
MS.gene024002.t1 MTR_4g122850 44.628 363 177 15 20 373 12 359 2.95e-74 235
MS.gene024002.t1 MTR_8g433040 42.440 377 178 15 4 372 13 358 9.10e-74 233
MS.gene024002.t1 MTR_8g032380 42.440 377 178 15 4 372 13 358 9.10e-74 233
MS.gene024002.t1 MTR_5g097210 41.910 377 194 11 1 372 1 357 1.57e-73 233
MS.gene024002.t1 MTR_4g023070 41.470 381 185 12 9 371 3 363 1.02e-72 231
MS.gene024002.t1 MTR_7g079420 51.625 277 87 7 106 375 905 1141 1.71e-72 245
MS.gene024002.t1 MTR_4g117750 42.424 363 178 10 22 375 16 356 5.79e-72 233
MS.gene024002.t1 MTR_4g117750 50.909 110 41 6 271 372 373 477 1.31e-15 78.6
MS.gene024002.t1 MTR_4g023130 39.037 374 154 11 3 371 2 306 6.65e-72 227
MS.gene024002.t1 MTR_4g023120 41.534 378 183 13 12 371 6 363 8.55e-71 226
MS.gene024002.t1 MTR_8g032390 42.520 381 172 15 1 374 31 371 9.65e-71 226
MS.gene024002.t1 MTR_4g118380 43.305 351 163 10 22 350 21 357 1.52e-69 223
MS.gene024002.t1 MTR_4g117770 41.361 382 190 12 3 372 2 361 6.09e-68 219
MS.gene024002.t1 MTR_4g117810 41.361 382 190 12 3 372 2 361 6.09e-68 219
MS.gene024002.t1 MTR_4g023190 43.603 383 172 18 2 372 3 353 1.37e-66 215
MS.gene024002.t1 MTR_4g117780 40.838 382 192 15 3 372 2 361 1.42e-66 215
MS.gene024002.t1 MTR_4g116330 40.103 389 145 15 3 372 16 335 2.14e-66 214
MS.gene024002.t1 MTR_4g023150 42.408 382 179 16 2 372 3 354 1.90e-65 212
MS.gene024002.t1 MTR_4g023380 38.083 386 159 12 23 372 30 371 5.91e-64 209
MS.gene024002.t1 MTR_4g023440 40.270 370 148 13 12 372 21 326 1.13e-63 206
MS.gene024002.t1 MTR_4g023200 41.828 361 169 17 23 372 24 354 9.12e-63 205
MS.gene024002.t1 MTR_4g121580 39.683 378 167 14 6 368 8 339 5.68e-60 199
MS.gene024002.t1 MTR_8g013010 44.444 279 135 9 3 279 48 308 8.56e-60 196
MS.gene024002.t1 MTR_8g098830 56.173 162 69 2 186 346 34 194 4.49e-55 181
MS.gene024002.t1 MTR_4g118400 39.672 305 131 10 75 372 36 294 6.52e-52 175
MS.gene024002.t1 MTR_1g055195 41.993 281 124 8 102 372 221 472 1.87e-51 179
MS.gene024002.t1 MTR_4g117870 39.550 311 130 10 70 375 7 264 8.22e-50 168
MS.gene024002.t1 MTR_4g118370 44.141 256 107 8 119 372 33 254 2.42e-48 164
MS.gene024002.t1 MTR_4g116340 40.664 241 112 8 8 245 35 247 9.69e-44 152
MS.gene024002.t1 MTR_8g433030 46.667 225 104 9 155 374 125 338 6.86e-43 152
MS.gene024002.t1 MTR_8g433030 46.512 86 41 3 1 84 31 113 4.34e-13 70.1
MS.gene024002.t1 MTR_7g079450 60.741 135 50 2 241 375 3 134 7.00e-43 146
MS.gene024002.t1 MTR_4g116320 45.370 216 106 7 162 373 46 253 9.08e-40 142
MS.gene024002.t1 MTR_6g463430 46.875 192 91 7 184 372 13 196 2.59e-39 139
MS.gene024002.t1 MTR_1g055175 43.655 197 104 5 181 373 3 196 3.67e-38 136
MS.gene024002.t1 MTR_4g114700 36.704 267 108 9 107 369 9 218 3.07e-33 124
MS.gene024002.t1 MTR_1g055250 39.269 219 120 7 149 365 46 253 4.86e-32 123
MS.gene024002.t1 MTR_8g040935 42.051 195 102 7 185 372 12 202 9.05e-32 119
MS.gene024002.t1 MTR_7g117720 37.727 220 103 7 1 215 1 191 2.20e-31 120
MS.gene024002.t1 MTR_7g117720 50.575 87 38 3 292 373 186 272 2.30e-14 73.2
MS.gene024002.t1 MTR_1g055165 46.104 154 76 5 224 373 163 313 1.62e-30 119
MS.gene024002.t1 MTR_1g055165 42.446 139 75 4 1 135 1 138 6.38e-23 98.2
MS.gene024002.t1 MTR_3g007410 30.794 315 181 14 12 314 55 344 2.28e-30 120
MS.gene024002.t1 MTR_3g007360 30.476 315 182 14 12 314 55 344 5.52e-30 119
MS.gene024002.t1 MTR_4g117530 35.857 251 109 8 124 372 47 247 6.19e-30 115
MS.gene024002.t1 MTR_3g007330 30.573 314 176 13 12 314 51 333 9.36e-30 118
MS.gene024002.t1 MTR_2g021150 29.102 323 186 13 12 317 17 313 6.05e-29 115
MS.gene024002.t1 MTR_3g013740 29.794 339 181 13 4 314 39 348 1.14e-28 115
MS.gene024002.t1 MTR_3g009310 29.747 316 188 12 4 309 36 327 2.20e-27 112
MS.gene024002.t1 MTR_4g133170 29.766 299 184 10 12 304 7 285 2.62e-27 111
MS.gene024002.t1 MTR_4g055060 27.410 332 196 12 2 314 22 327 2.70e-27 111
MS.gene024002.t1 MTR_4g107820 30.201 298 186 9 12 307 39 316 4.12e-27 111
MS.gene024002.t1 MTR_4g107780 30.201 298 186 9 12 307 39 316 4.12e-27 111
MS.gene024002.t1 MTR_4g107820 30.872 298 184 10 12 307 39 316 5.35e-27 111
MS.gene024002.t1 MTR_2g029990 27.838 370 235 13 12 370 54 402 5.87e-27 110
MS.gene024002.t1 MTR_4g107780 30.872 298 184 10 12 307 39 316 6.65e-27 110
MS.gene024002.t1 MTR_1g068835 28.296 311 191 10 9 309 4 292 1.11e-26 109
MS.gene024002.t1 MTR_4g117430 41.958 143 60 5 119 261 15 134 2.99e-26 103
MS.gene024002.t1 MTR_6g065980 29.139 302 167 14 12 304 19 282 3.99e-26 107
MS.gene024002.t1 MTR_3g007430 30.094 319 181 13 12 317 46 335 4.44e-26 108
MS.gene024002.t1 MTR_8g467140 31.190 311 164 14 12 304 35 313 7.13e-26 106
MS.gene024002.t1 MTR_4g118360 47.500 120 61 2 255 372 1 120 1.12e-25 100
MS.gene024002.t1 MTR_3g014540 27.987 318 186 11 12 314 32 321 1.68e-25 106
MS.gene024002.t1 MTR_7g070830 26.521 411 238 14 12 371 24 421 2.07e-25 106
MS.gene024002.t1 MTR_3g014570 27.811 338 192 14 6 320 19 327 2.28e-25 106
MS.gene024002.t1 MTR_4g108820 29.934 304 144 13 12 307 45 287 2.31e-25 105
MS.gene024002.t1 MTR_6g021880 28.610 374 221 15 20 370 31 381 4.21e-25 105
MS.gene024002.t1 MTR_1g097560 30.061 326 178 15 6 320 33 319 8.17e-25 104
MS.gene024002.t1 MTR_7g407070 28.485 330 192 14 12 316 35 345 1.25e-24 104
MS.gene024002.t1 MTR_2g426090 27.707 314 196 11 9 304 6 306 2.00e-24 103
MS.gene024002.t1 MTR_5g011200 27.244 312 178 15 12 304 20 301 2.42e-24 103
MS.gene024002.t1 MTR_3g036290 28.302 318 179 13 9 315 21 300 3.02e-24 102
MS.gene024002.t1 MTR_1g068875 27.832 309 194 10 9 309 4 291 3.42e-24 102
MS.gene024002.t1 MTR_5g022420 29.467 319 177 15 1 306 15 298 4.87e-24 102
MS.gene024002.t1 MTR_3g006670 31.046 306 173 12 12 304 52 332 9.73e-24 102
MS.gene024002.t1 MTR_7g070440 29.375 320 181 14 12 309 10 306 1.07e-23 101
MS.gene024002.t1 MTR_2g021155 26.613 372 239 13 12 371 39 388 1.15e-23 103
MS.gene024002.t1 MTR_3g013770 28.107 338 184 12 4 314 24 329 1.23e-23 101
MS.gene024002.t1 MTR_0115s0020 26.303 403 250 15 8 375 9 399 1.36e-23 101
MS.gene024002.t1 MTR_1g054725 25.693 397 221 18 8 370 19 375 1.52e-23 100
MS.gene024002.t1 MTR_0267s0050 27.344 384 207 13 9 347 6 362 1.66e-23 100
MS.gene024002.t1 MTR_7g070880 26.341 410 240 14 12 371 24 421 2.70e-23 100
MS.gene024002.t1 MTR_3g009240 30.333 300 176 13 12 304 39 312 3.29e-23 100
MS.gene024002.t1 MTR_2g055970 28.177 362 213 15 3 345 205 538 4.49e-23 101
MS.gene024002.t1 MTR_7g017040 28.537 410 214 25 10 371 16 394 5.40e-23 99.8
MS.gene024002.t1 MTR_1g097330 29.450 309 176 14 12 308 19 297 5.69e-23 99.8
MS.gene024002.t1 MTR_2g426070 27.500 320 188 13 11 304 8 309 6.94e-23 99.4
MS.gene024002.t1 MTR_3g011100 29.155 343 182 18 1 314 221 531 8.23e-23 100
MS.gene024002.t1 MTR_2g021190 28.000 300 190 9 12 304 24 304 1.28e-22 98.2
MS.gene024002.t1 MTR_4g061340 28.923 325 173 14 12 312 29 319 1.31e-22 98.2
MS.gene024002.t1 MTR_5g057790 27.586 319 190 15 12 317 49 339 2.17e-22 97.8
MS.gene024002.t1 MTR_0128s0020 28.863 343 182 13 1 311 10 322 2.58e-22 97.8
MS.gene024002.t1 MTR_1g094210 27.793 367 202 18 5 348 52 378 2.82e-22 97.8
MS.gene024002.t1 MTR_1g094210 29.245 318 174 16 5 308 52 332 3.13e-22 97.4
MS.gene024002.t1 MTR_3g007270 28.788 330 191 16 6 314 43 349 3.32e-22 97.4
MS.gene024002.t1 MTR_5g057690 26.257 358 221 16 12 364 49 368 3.38e-22 97.1
MS.gene024002.t1 MTR_3g010870 26.478 389 219 17 9 370 36 384 3.48e-22 97.1
MS.gene024002.t1 MTR_7g091630 25.758 330 207 8 5 309 28 344 4.16e-22 97.4
MS.gene024002.t1 MTR_0464s0020 28.329 353 174 14 9 311 23 346 5.17e-22 97.1
MS.gene024002.t1 MTR_3g083640 26.974 304 180 12 12 304 58 330 6.06e-22 96.7
MS.gene024002.t1 MTR_2g043410 28.698 338 180 10 9 311 22 333 7.66e-22 96.7
MS.gene024002.t1 MTR_2g024110 26.797 306 196 11 12 308 7 293 7.86e-22 95.9
MS.gene024002.t1 MTR_0064s0160 27.273 396 245 18 8 374 41 422 7.96e-22 96.7
MS.gene024002.t1 MTR_7g055930 26.244 442 232 19 1 370 5 424 8.97e-22 96.3
MS.gene024002.t1 MTR_5g057710 26.923 364 222 16 12 364 49 379 9.66e-22 95.9
MS.gene024002.t1 MTR_5g007610 27.900 319 207 12 5 313 36 341 1.02e-21 95.9
MS.gene024002.t1 MTR_1g097490 29.938 324 195 13 2 320 42 338 1.46e-21 95.5
MS.gene024002.t1 MTR_2g046920 26.632 383 234 13 5 370 20 372 1.69e-21 95.1
MS.gene024002.t1 MTR_7g055870 26.244 442 232 19 1 370 5 424 1.83e-21 95.5
MS.gene024002.t1 MTR_1g068860 27.419 310 201 10 7 309 2 294 1.93e-21 95.1
MS.gene024002.t1 MTR_1g050542 28.387 310 183 14 9 309 57 336 2.23e-21 95.1
MS.gene024002.t1 MTR_2g028110 27.726 321 188 11 9 309 4 300 2.28e-21 94.7
MS.gene024002.t1 MTR_0129s0070 26.420 405 247 18 1 374 9 393 3.97e-21 94.4
MS.gene024002.t1 MTR_4g031770 26.059 307 189 10 12 306 7 287 6.12e-21 93.6
MS.gene024002.t1 MTR_0044s0300 27.129 317 189 13 2 304 27 315 7.13e-21 93.6
MS.gene024002.t1 MTR_6g055210 27.660 423 235 15 2 370 14 419 8.81e-21 93.6
MS.gene024002.t1 MTR_2g078900 25.987 304 184 10 12 304 36 309 9.25e-21 92.8
MS.gene024002.t1 MTR_2g028130 27.879 330 197 15 6 309 2 316 1.05e-20 93.2
MS.gene024002.t1 MTR_2g028140 28.779 344 172 18 6 304 2 317 1.13e-20 93.2
MS.gene024002.t1 MTR_0667s0010 25.309 324 193 12 6 304 3 302 1.25e-20 92.8
MS.gene024002.t1 MTR_2g043400 29.586 338 177 13 9 311 23 334 1.61e-20 92.8
MS.gene024002.t1 MTR_1g056710 26.852 324 193 15 12 320 37 331 1.76e-20 92.4
MS.gene024002.t1 MTR_1g055070 28.881 277 163 13 3 259 42 304 1.91e-20 92.4
MS.gene024002.t1 MTR_3g013950 26.823 384 211 14 9 347 6 364 2.38e-20 92.0
MS.gene024002.t1 MTR_6g027910 24.403 377 253 10 12 370 12 374 2.59e-20 91.7
MS.gene024002.t1 MTR_2g426020 27.411 394 231 16 8 369 5 375 2.68e-20 92.0
MS.gene024002.t1 MTR_1g088120 27.326 344 178 11 12 311 13 328 2.78e-20 92.0
MS.gene024002.t1 MTR_2g006360 28.526 312 159 13 2 309 39 290 3.04e-20 91.3
MS.gene024002.t1 MTR_4g030830 26.946 334 192 13 1 304 1 312 3.12e-20 91.7
MS.gene024002.t1 MTR_3g072470 27.536 345 179 12 9 311 19 334 3.67e-20 91.7
MS.gene024002.t1 MTR_4g070550 29.641 334 176 18 6 304 2 311 3.91e-20 91.3
MS.gene024002.t1 MTR_3g024110 26.518 313 187 10 12 314 104 383 4.15e-20 91.7
MS.gene024002.t1 MTR_2g031720 26.575 365 216 16 6 344 2 340 4.57e-20 91.3
MS.gene024002.t1 MTR_2g046900 27.013 385 238 16 5 370 24 384 4.61e-20 91.3
MS.gene024002.t1 MTR_3g006500 25.926 324 184 12 1 304 9 296 4.88e-20 90.9
MS.gene024002.t1 MTR_6g004660 26.562 384 244 11 8 370 14 380 5.20e-20 90.9
MS.gene024002.t1 MTR_7g057270 26.744 344 180 14 9 309 25 339 5.33e-20 91.3
MS.gene024002.t1 MTR_3g010970 26.299 308 170 11 12 304 51 316 5.40e-20 90.9
MS.gene024002.t1 MTR_6g017280 26.214 412 237 20 1 370 1 387 5.63e-20 90.9
MS.gene024002.t1 MTR_3g036430 26.871 294 167 11 12 304 23 269 5.80e-20 90.1
MS.gene024002.t1 MTR_7g013590 27.632 304 187 13 12 304 39 320 6.05e-20 90.9
MS.gene024002.t1 MTR_4g117550 26.196 397 229 15 2 371 10 369 7.01e-20 90.5
MS.gene024002.t1 MTR_8g099460 28.173 323 193 15 6 309 2 304 8.13e-20 90.5
MS.gene024002.t1 MTR_3g083010 28.528 326 189 14 9 304 6 317 8.56e-20 90.5
MS.gene024002.t1 MTR_3g010390 28.529 333 179 16 12 313 36 340 9.42e-20 90.5
MS.gene024002.t1 MTR_0054s0090 22.794 408 232 17 17 371 25 402 1.05e-19 90.1
MS.gene024002.t1 MTR_5g023000 56.180 89 36 2 286 372 6 93 1.05e-19 83.6
MS.gene024002.t1 MTR_7g056003 26.866 335 189 10 9 311 15 325 1.09e-19 90.1
MS.gene024002.t1 MTR_2g028160 28.571 336 191 17 6 309 2 320 1.13e-19 90.1
MS.gene024002.t1 MTR_7g056290 28.613 346 175 14 9 311 22 338 1.14e-19 90.1
MS.gene024002.t1 MTR_7g016930 27.607 326 195 15 3 311 10 311 1.34e-19 89.0
MS.gene024002.t1 MTR_1g054575 28.710 310 170 13 9 302 51 325 1.46e-19 90.9
MS.gene024002.t1 MTR_7g066030 24.940 417 235 13 4 371 16 403 1.71e-19 89.7
MS.gene024002.t1 MTR_3g030330 26.910 301 181 11 12 304 23 292 1.74e-19 89.4
MS.gene024002.t1 MTR_3g436150 26.627 338 196 14 6 314 23 337 1.86e-19 89.4
MS.gene024002.t1 MTR_2g021050 27.389 314 179 11 6 304 2 281 2.15e-19 89.0
MS.gene024002.t1 MTR_2g025420 26.111 360 208 16 9 328 6 347 3.82e-19 88.6
MS.gene024002.t1 MTR_3g006570 26.948 308 199 12 3 304 14 301 3.84e-19 88.2
MS.gene024002.t1 MTR_5g046300 25.879 313 172 14 12 304 7 279 3.91e-19 87.8
MS.gene024002.t1 MTR_5g046290 25.879 313 172 14 12 304 7 279 3.91e-19 87.8
MS.gene024002.t1 MTR_3g437520 27.606 355 177 14 9 311 23 349 4.42e-19 89.0
MS.gene024002.t1 MTR_5g057020 26.984 315 190 14 12 323 49 326 5.30e-19 87.4
MS.gene024002.t1 MTR_3g030240 24.595 309 170 13 12 304 43 304 5.48e-19 87.8
MS.gene024002.t1 MTR_3g010590 25.902 305 174 11 12 304 42 306 5.96e-19 87.8
MS.gene024002.t1 MTR_7g060940 26.822 343 185 12 3 311 16 326 6.08e-19 87.8
MS.gene024002.t1 MTR_2g426060 27.164 335 173 16 9 304 6 308 7.17e-19 87.8
MS.gene024002.t1 MTR_2g104340 26.065 399 241 16 8 371 13 392 7.35e-19 87.8
MS.gene024002.t1 MTR_2g021800 24.524 420 247 16 4 371 11 412 7.61e-19 87.8
MS.gene024002.t1 MTR_6g034720 45.082 122 57 4 130 251 53 164 8.47e-19 84.3
MS.gene024002.t1 MTR_7g069550 25.750 400 217 17 1 349 5 375 8.77e-19 87.4
MS.gene024002.t1 MTR_1g442850 28.746 327 172 12 9 304 5 301 1.15e-18 87.0
MS.gene024002.t1 MTR_7g066100 25.648 386 258 9 12 372 14 395 1.29e-18 87.0
MS.gene024002.t1 MTR_6g007135 25.907 386 240 14 9 370 26 389 1.40e-18 86.7
MS.gene024002.t1 MTR_1g112930 26.578 301 179 13 13 302 29 298 1.51e-18 86.7
MS.gene024002.t1 MTR_3g010520 26.774 310 176 13 4 304 19 286 2.42e-18 85.9
MS.gene024002.t1 MTR_5g097680 24.941 425 255 15 1 371 9 423 2.59e-18 86.3
MS.gene024002.t1 MTR_4g030980 25.479 365 190 14 6 309 11 354 2.67e-18 86.3
MS.gene024002.t1 MTR_1g055375 24.485 388 246 19 7 370 2 366 2.80e-18 85.5
MS.gene024002.t1 MTR_3g011120 26.970 330 203 12 2 312 7 317 3.02e-18 85.5
MS.gene024002.t1 MTR_7g077970 24.800 375 213 14 9 342 7 353 3.09e-18 85.9
MS.gene024002.t1 MTR_8g101580 27.476 313 184 13 10 307 45 329 3.24e-18 85.9
MS.gene024002.t1 MTR_5g037680 24.515 412 233 16 4 370 3 381 3.44e-18 86.3
MS.gene024002.t1 MTR_3g009260 26.752 314 184 13 12 313 44 323 3.64e-18 85.5
MS.gene024002.t1 MTR_2g021252 25.197 381 219 17 12 371 50 385 3.64e-18 85.5
MS.gene024002.t1 MTR_2g461450 26.537 309 193 9 7 309 16 296 3.97e-18 85.1
MS.gene024002.t1 MTR_3g464500 26.667 330 193 10 6 309 23 329 4.09e-18 85.5
MS.gene024002.t1 MTR_2g046830 30.000 320 180 16 5 310 21 310 4.90e-18 85.1
MS.gene024002.t1 MTR_8g062660 25.938 320 196 12 1 302 13 309 5.33e-18 85.9
MS.gene024002.t1 MTR_0054s0100 24.181 397 238 16 17 369 25 402 5.43e-18 85.1
MS.gene024002.t1 MTR_7g056820 25.974 385 209 17 6 347 3 354 6.20e-18 84.7
MS.gene024002.t1 MTR_7g055987 26.807 332 176 11 9 311 20 313 1.09e-17 84.0
MS.gene024002.t1 MTR_2g047832 28.955 335 184 17 5 310 25 334 1.21e-17 84.3
MS.gene024002.t1 MTR_3g011060 27.052 329 165 14 12 304 31 320 1.24e-17 84.0
MS.gene024002.t1 MTR_6g016285 24.009 429 228 17 9 370 20 417 1.28e-17 84.3
MS.gene024002.t1 MTR_0129s0050 25.542 415 247 17 2 371 7 404 1.46e-17 84.0
MS.gene024002.t1 MTR_2g425980 28.994 338 176 20 9 309 5 315 1.65e-17 84.0
MS.gene024002.t1 MTR_5g096630 25.284 352 196 14 1 307 10 339 1.79e-17 83.6
MS.gene024002.t1 MTR_7g056797 28.012 332 196 14 6 311 20 334 1.86e-17 83.6
MS.gene024002.t1 MTR_3g023930 25.862 406 196 20 4 370 28 367 2.12e-17 83.2
MS.gene024002.t1 MTR_4g013180 28.107 338 187 15 6 311 7 320 2.53e-17 83.6
MS.gene024002.t1 MTR_3g464470 26.606 327 194 11 6 309 3 306 2.54e-17 83.2
MS.gene024002.t1 MTR_3g024040 26.603 312 179 11 15 314 37 310 2.85e-17 82.8
MS.gene024002.t1 MTR_0129s0120 25.313 399 253 15 2 371 10 392 3.27e-17 82.8
MS.gene024002.t1 MTR_4g024890 25.455 330 205 12 1 309 1 310 4.15e-17 82.4
MS.gene024002.t1 MTR_7g066000 25.538 325 196 10 12 309 28 333 5.24e-17 82.4
MS.gene024002.t1 MTR_1g115160 26.603 312 181 13 7 306 20 295 5.49e-17 82.0
MS.gene024002.t1 MTR_7g078860 26.822 343 191 16 5 311 4 322 5.86e-17 82.0
MS.gene024002.t1 MTR_4g129190 25.513 341 193 12 5 311 2 315 5.95e-17 82.0
MS.gene024002.t1 MTR_8g073550 29.064 203 113 7 12 202 33 216 6.17e-17 79.7
MS.gene024002.t1 MTR_2g021770 24.519 416 253 15 1 371 4 403 8.76e-17 81.6
MS.gene024002.t1 MTR_3g024150 26.367 311 175 15 12 304 38 312 1.05e-16 81.3
MS.gene024002.t1 MTR_0097s0030 25.201 373 220 14 6 347 11 355 1.09e-16 81.3
MS.gene024002.t1 MTR_2g047240 25.201 373 220 14 6 347 11 355 1.09e-16 81.3
MS.gene024002.t1 MTR_2g047892 26.331 338 178 14 9 308 21 325 1.17e-16 81.3
MS.gene024002.t1 MTR_5g069930 24.545 330 199 13 7 311 4 308 1.21e-16 80.9
MS.gene024002.t1 MTR_2g025960 28.507 221 124 10 104 304 5 211 1.25e-16 80.1
MS.gene024002.t1 MTR_7g007300 27.044 318 162 15 12 306 106 376 1.56e-16 81.3
MS.gene024002.t1 MTR_3g058480 26.415 265 155 7 12 259 42 283 1.72e-16 80.1
MS.gene024002.t1 MTR_0760s0010 25.000 376 225 13 14 370 52 389 1.76e-16 80.5
MS.gene024002.t1 MTR_7g056200 25.378 331 176 10 7 309 21 308 1.78e-16 80.5
MS.gene024002.t1 MTR_4g014370 21.596 426 256 16 1 371 3 405 1.83e-16 80.5
MS.gene024002.t1 MTR_5g043160 28.319 339 185 15 12 306 53 377 1.91e-16 80.9
MS.gene024002.t1 MTR_4g028510 24.641 418 242 20 2 371 6 398 2.10e-16 80.9
MS.gene024002.t1 MTR_4g102410 23.116 398 258 14 3 362 55 442 2.27e-16 80.5
MS.gene024002.t1 MTR_7g062100 27.586 319 189 13 12 309 27 324 2.50e-16 80.1
MS.gene024002.t1 MTR_4g013175 26.536 358 175 13 12 311 13 340 2.86e-16 80.1
MS.gene024002.t1 MTR_7g091640 25.148 338 193 11 6 309 32 343 3.03e-16 79.7
MS.gene024002.t1 MTR_5g068040 28.086 324 169 13 12 309 19 304 3.18e-16 79.7
MS.gene024002.t1 MTR_7g056760 26.567 335 193 15 7 309 21 334 3.26e-16 79.7
MS.gene024002.t1 MTR_7g066010 25.667 300 166 11 4 268 16 293 3.34e-16 79.7
MS.gene024002.t1 MTR_3g030350 27.575 301 184 15 12 304 38 312 4.01e-16 79.3
MS.gene024002.t1 MTR_7g052150 25.872 344 182 14 4 311 16 322 4.40e-16 79.3
MS.gene024002.t1 MTR_5g097350 25.326 383 233 15 18 371 25 383 4.43e-16 79.3
MS.gene024002.t1 MTR_3g010920 24.672 381 225 16 7 370 46 381 4.97e-16 79.3
MS.gene024002.t1 MTR_1g071010 23.626 364 225 12 12 343 18 360 5.16e-16 79.3
MS.gene024002.t1 MTR_4g080200 24.722 360 222 14 7 350 1 327 6.16e-16 78.6
MS.gene024002.t1 MTR_7g056260 26.506 332 184 11 9 309 14 316 6.74e-16 78.2
MS.gene024002.t1 MTR_4g122860 33.158 190 88 8 191 372 156 314 6.97e-16 78.2
MS.gene024002.t1 MTR_0649s0020 25.260 384 214 14 9 347 10 365 7.04e-16 79.0
MS.gene024002.t1 MTR_2g031680 25.890 309 184 13 12 304 9 288 7.59e-16 78.6
MS.gene024002.t1 MTR_1g061330 23.514 387 244 13 9 374 4 359 9.07e-16 78.6
MS.gene024002.t1 MTR_3g010430 25.234 321 190 13 3 304 29 318 9.15e-16 78.6
MS.gene024002.t1 MTR_2g022000 23.134 402 243 13 6 356 13 399 1.04e-15 78.6
MS.gene024002.t1 MTR_3g036335 24.590 305 192 10 12 304 44 322 1.05e-15 78.2
MS.gene024002.t1 MTR_7g066850 26.462 325 192 13 9 309 22 323 1.11e-15 78.6
MS.gene024002.t1 MTR_4g037465 25.594 379 224 16 9 351 20 376 1.16e-15 78.2
MS.gene024002.t1 MTR_5g097330 24.390 410 251 13 2 371 9 399 1.18e-15 78.2
MS.gene024002.t1 MTR_4g030110 25.588 340 181 13 1 309 21 319 1.21e-15 78.2
MS.gene024002.t1 MTR_3g030250 23.920 301 187 9 12 304 40 306 1.30e-15 77.8
MS.gene024002.t1 MTR_7g028660 25.959 339 176 15 9 307 10 313 1.53e-15 77.8
MS.gene024002.t1 MTR_7g061060 25.948 343 178 13 6 309 10 315 1.57e-15 77.8
MS.gene024002.t1 MTR_2g038680 24.818 411 241 18 10 371 16 407 1.58e-15 77.8
MS.gene024002.t1 MTR_5g069760 25.767 326 195 13 7 311 4 303 2.09e-15 77.4
MS.gene024002.t1 MTR_4g129160 24.405 336 198 10 13 309 12 330 2.97e-15 76.6
MS.gene024002.t1 MTR_4g011660 26.593 361 175 14 6 309 16 343 3.05e-15 77.0
MS.gene024002.t1 MTR_3g010620 24.839 310 175 11 9 304 36 301 3.87e-15 76.6
MS.gene024002.t1 MTR_3g009300 27.653 311 162 14 12 313 37 293 4.80e-15 75.9
MS.gene024002.t1 MTR_8g046310 25.773 388 238 16 8 372 15 375 5.12e-15 76.3
MS.gene024002.t1 MTR_7g078040 26.741 359 192 14 1 309 1 338 5.44e-15 76.3
MS.gene024002.t1 MTR_4g013185 25.788 349 189 14 12 311 13 340 5.92e-15 76.3
MS.gene024002.t1 MTR_5g097220 24.882 422 244 19 1 371 5 404 5.93e-15 76.3
MS.gene024002.t1 MTR_3g006530 24.297 391 227 16 12 370 43 396 6.21e-15 75.9
MS.gene024002.t1 MTR_4g019990 24.661 369 209 13 12 335 9 353 6.39e-15 75.9
MS.gene024002.t1 MTR_5g046260 25.926 297 162 16 12 304 7 249 8.50e-15 74.7
MS.gene024002.t1 MTR_4g055820 22.663 353 206 10 1 307 6 337 9.46e-15 75.1
MS.gene024002.t1 MTR_1g114700 26.349 315 181 14 12 306 32 315 9.50e-15 75.5
MS.gene024002.t1 MTR_0242s0060 25.073 343 199 11 1 306 1 322 1.10e-14 75.5
MS.gene024002.t1 MTR_0242s0040 25.073 343 199 11 1 306 1 322 1.10e-14 75.5
MS.gene024002.t1 MTR_5g027330 24.138 319 197 12 13 306 44 342 1.15e-14 75.5
MS.gene024002.t1 MTR_5g027370 23.824 319 198 11 13 306 33 331 1.41e-14 75.1
MS.gene024002.t1 MTR_4g030090 25.552 317 194 13 12 304 17 315 1.44e-14 75.1
MS.gene024002.t1 MTR_8g063370 25.526 333 210 13 1 314 15 328 1.53e-14 74.7
MS.gene024002.t1 MTR_2g047200 25.735 408 224 22 9 370 19 393 1.63e-14 74.7
MS.gene024002.t1 MTR_7g061050 25.228 329 195 9 6 309 10 312 1.75e-14 74.7
MS.gene024002.t1 MTR_7g078840 25.698 358 184 13 12 311 13 346 2.02e-14 74.7
MS.gene024002.t1 MTR_7g062060 25.948 343 200 13 5 309 7 333 2.20e-14 74.3
MS.gene024002.t1 MTR_5g094350 24.727 275 164 10 12 260 16 273 2.28e-14 73.2
MS.gene024002.t1 MTR_4g030760 23.529 374 230 13 2 349 66 409 2.98e-14 73.9
MS.gene024002.t1 MTR_7g022600 25.648 347 200 13 6 311 20 349 3.13e-14 73.9
MS.gene024002.t1 MTR_7g079640 24.938 401 213 20 1 358 5 360 3.27e-14 73.6
MS.gene024002.t1 MTR_3g011650 27.948 229 129 10 12 232 82 282 3.44e-14 72.8
MS.gene024002.t1 MTR_7g055977 26.426 333 188 12 7 311 5 308 4.73e-14 73.2
MS.gene024002.t1 MTR_2g010920 25.220 341 209 12 7 309 18 350 5.09e-14 73.6
MS.gene024002.t1 MTR_4g006270 24.918 305 172 11 12 302 7 268 5.13e-14 73.2
MS.gene024002.t1 MTR_8g063440 23.077 390 263 13 3 371 6 379 6.64e-14 72.8
MS.gene024002.t1 MTR_7g078900 26.901 342 188 13 12 311 15 336 1.53e-13 72.0
MS.gene024002.t1 MTR_3g058440 27.559 254 146 10 12 249 38 269 1.72e-13 70.9
MS.gene024002.t1 MTR_6g079810 23.664 393 255 18 17 374 78 460 1.81e-13 72.0
MS.gene024002.t1 MTR_5g057643 28.194 227 128 11 12 227 49 251 2.05e-13 70.1
MS.gene024002.t1 MTR_7g061090 25.501 349 182 14 7 309 20 336 2.34e-13 71.2
MS.gene024002.t1 MTR_7g077070 24.859 354 208 13 6 317 13 350 2.36e-13 71.2
MS.gene024002.t1 MTR_8g064890 28.528 326 189 16 12 312 19 325 2.56e-13 71.2
MS.gene024002.t1 MTR_6g053240 23.750 320 183 11 12 304 31 316 3.04e-13 70.9
MS.gene024002.t1 MTR_8g467670 25.152 330 203 14 2 308 6 314 3.21e-13 70.9
MS.gene024002.t1 MTR_6g053260 24.762 315 181 11 12 304 340 620 3.35e-13 71.2
MS.gene024002.t1 MTR_1g053510 25.647 425 231 20 5 374 11 405 3.92e-13 70.5
MS.gene024002.t1 MTR_2g031700 25.000 228 136 6 12 232 9 208 4.23e-13 69.7
MS.gene024002.t1 MTR_5g096910 21.554 399 257 11 6 371 14 389 4.40e-13 70.5
MS.gene024002.t1 MTR_6g461660 24.501 351 209 12 3 316 13 344 4.44e-13 70.5
MS.gene024002.t1 MTR_3g023940 23.238 383 234 14 12 370 37 383 4.58e-13 70.1
MS.gene024002.t1 MTR_5g022045 23.476 328 195 12 13 305 39 345 4.96e-13 70.5
MS.gene024002.t1 MTR_2g437110 24.627 402 233 19 9 370 21 392 4.98e-13 70.5
MS.gene024002.t1 MTR_5g064700 24.648 284 175 11 115 371 93 364 5.17e-13 70.1
MS.gene024002.t1 MTR_2g010900 25.159 314 185 11 27 309 1 295 5.94e-13 70.1
MS.gene024002.t1 MTR_2g021210 25.080 311 191 12 4 304 78 356 6.00e-13 70.1
MS.gene024002.t1 MTR_4g008790 23.709 426 212 16 12 368 42 423 6.66e-13 70.1
MS.gene024002.t1 MTR_3g030310 24.606 317 181 13 12 304 24 306 7.04e-13 69.7
MS.gene024002.t1 MTR_4g028660 24.048 420 239 19 2 371 6 395 7.76e-13 69.7
MS.gene024002.t1 MTR_4g027450 24.048 420 239 19 2 371 6 395 7.76e-13 69.7
MS.gene024002.t1 MTR_3g009250 27.074 229 130 9 12 232 44 243 8.91e-13 67.8
MS.gene024002.t1 MTR_7g050480 26.074 326 182 13 6 304 19 312 1.25e-12 68.9
MS.gene024002.t1 MTR_8g012090 24.471 331 177 12 6 307 13 299 1.26e-12 68.6
MS.gene024002.t1 MTR_7g056737 28.529 340 179 13 3 309 9 317 1.28e-12 68.9
MS.gene024002.t1 MTR_5g072060 24.682 393 235 16 8 372 5 364 2.37e-12 68.6
MS.gene024002.t1 MTR_1g055200 44.681 94 38 4 104 196 6 86 3.19e-12 63.2
MS.gene024002.t1 MTR_2g033410 26.014 296 182 12 12 296 12 281 3.20e-12 67.4
MS.gene024002.t1 MTR_7g050520 25.767 326 183 13 6 304 19 312 3.33e-12 67.8
MS.gene024002.t1 MTR_3g010870 25.833 240 123 11 9 230 36 238 4.10e-12 67.0
MS.gene024002.t1 MTR_6g092560 23.270 318 201 9 12 304 15 314 4.32e-12 67.4
MS.gene024002.t1 MTR_2g021950 23.429 350 209 13 2 312 7 336 5.89e-12 67.0
MS.gene024002.t1 MTR_2g104280 22.886 402 259 13 8 371 13 401 6.56e-12 67.0
MS.gene024002.t1 MTR_7g078050 35.772 123 67 5 12 125 9 128 6.82e-12 65.5
MS.gene024002.t1 MTR_6g048120 24.272 309 197 11 12 304 39 326 7.68e-12 66.6
MS.gene024002.t1 MTR_7g056570 26.076 395 225 18 12 371 21 383 9.48e-12 66.6
MS.gene024002.t1 MTR_1g068905 26.449 276 158 10 9 279 4 239 1.16e-11 65.5
MS.gene024002.t1 MTR_4g023430 43.750 80 43 2 3 81 35 113 1.23e-11 64.3
MS.gene024002.t1 MTR_3g030320 28.085 235 139 11 76 304 13 223 1.62e-11 65.1
MS.gene024002.t1 MTR_1g115185 23.810 315 188 9 12 306 42 324 1.64e-11 65.5
MS.gene024002.t1 MTR_5g074850 26.852 324 189 14 17 304 43 354 1.71e-11 66.2
MS.gene024002.t1 MTR_1g029650 24.545 330 200 12 9 311 8 315 2.02e-11 65.5
MS.gene024002.t1 MTR_3g058470 23.548 310 170 7 12 304 40 299 2.56e-11 64.7
MS.gene024002.t1 MTR_4g007940 25.475 263 146 13 120 353 80 321 2.82e-11 64.7
MS.gene024002.t1 MTR_5g076490 25.368 272 172 8 124 371 68 332 2.82e-11 64.7
MS.gene024002.t1 MTR_5g008530 56.364 55 21 1 6 60 15 66 3.27e-11 59.3
MS.gene024002.t1 MTR_7g055850 30.542 203 98 9 1 168 5 199 3.82e-11 63.5
MS.gene024002.t1 MTR_7g066040 28.723 188 95 8 101 260 24 200 5.05e-11 62.8
MS.gene024002.t1 MTR_4g028680 23.837 344 209 15 2 307 6 334 5.11e-11 63.9
MS.gene024002.t1 MTR_5g092850 24.615 325 200 14 12 304 19 330 7.87e-11 63.5
MS.gene024002.t1 MTR_5g023570 36.697 109 64 3 7 114 34 138 8.63e-11 60.1
MS.gene024002.t1 MTR_2g047878 25.135 370 200 19 9 348 20 342 8.84e-11 63.2
MS.gene024002.t1 MTR_2g040050 25.000 240 153 9 66 304 7 220 9.28e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024002.t1 AT3G06240 27.557 352 186 14 2 307 29 357 4.26e-25 105
MS.gene024002.t1 AT4G12560 24.740 384 242 13 12 369 7 369 4.38e-19 88.6
MS.gene024002.t1 AT4G12560 24.740 384 242 13 12 369 7 369 4.38e-19 88.6
MS.gene024002.t1 AT4G12560 24.740 384 242 13 12 369 7 369 4.38e-19 88.6
MS.gene024002.t1 AT3G23880 27.476 313 198 10 3 306 7 299 4.56e-19 87.8
MS.gene024002.t1 AT5G49610 28.713 303 171 16 12 300 12 283 1.13e-15 77.8
MS.gene024002.t1 AT1G12870 25.503 298 189 14 12 294 36 315 1.68e-13 71.6
MS.gene024002.t1 AT1G33530 25.552 317 169 17 10 305 97 367 1.74e-13 72.0

Find 91 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATTGCCCTTGATTTAA+AGG 0.097182 7.1:+24600904 MS.gene024002:CDS
CTCTGTATACACGGCCATTT+TGG 0.162048 7.1:-24601257 None:intergenic
AAATCAATGGATAAGGTTTC+AGG 0.212005 7.1:-24600386 None:intergenic
AAAGTGTAAAGTTGCAAAAT+TGG 0.223079 7.1:-24600309 None:intergenic
ATAGTCATTATAGCATTTAT+AGG 0.282447 7.1:-24600693 None:intergenic
CTGACAAAGGCTTCTATCTA+TGG 0.300497 7.1:+24600522 MS.gene024002:CDS
TTCTATACAATATGATTTGT+TGG 0.329655 7.1:+24600976 MS.gene024002:CDS
TCTCATTGAGAGCTAATAAC+TGG 0.335376 7.1:+24600750 MS.gene024002:CDS
AGGATTTCTGTTATCACTTC+CGG 0.338610 7.1:-24600212 None:intergenic
CAAGAACAACCCAACTTTGT+TGG 0.347764 7.1:-24600831 None:intergenic
CTTGAATGGGGCTATTCATT+GGG 0.357670 7.1:+24600850 MS.gene024002:CDS
CCTAGGTCACCTATGACTAT+TGG 0.359555 7.1:+24600575 MS.gene024002:CDS
TCTTGAATGGGGCTATTCAT+TGG 0.366732 7.1:+24600849 MS.gene024002:CDS
ACAAATTGTGGTGATATAGT+TGG 0.377094 7.1:+24601145 MS.gene024002:CDS
AAAGTTGGGTTGTTCTTGAA+TGG 0.378544 7.1:+24600836 MS.gene024002:CDS
AAGTGTAAAGTTGCAAAATT+GGG 0.380787 7.1:-24600308 None:intergenic
TTTAAAGGAAACGACAATAT+CGG 0.386229 7.1:+24600919 MS.gene024002:CDS
AAGAAGCGTGCATCTGCTTC+CGG 0.386581 7.1:+24600193 MS.gene024002:CDS
ACTTCACCGGCAACCTCAAT+AGG 0.386853 7.1:-24600232 None:intergenic
TTAGTATTAATGACCATATA+AGG 0.398204 7.1:-24600800 None:intergenic
TATGATTTGTTGGTGCTTGA+TGG 0.399308 7.1:+24600986 MS.gene024002:CDS
TTGTCGTTTCCTTTAAATCA+AGG 0.403819 7.1:-24600913 None:intergenic
TGAAGTATGTACTACGTTAC+AGG 0.406160 7.1:+24600249 MS.gene024002:CDS
AACAGATGGTTATGATGAAT+TGG 0.415086 7.1:+24601168 MS.gene024002:CDS
AAGTTGGGTTGTTCTTGAAT+GGG 0.426332 7.1:+24600837 MS.gene024002:CDS
ACATGGATACAGTGGAGATA+TGG 0.432548 7.1:+24601032 MS.gene024002:CDS
AGCTTGATTCCAATAGTCAT+AGG 0.434478 7.1:-24600584 None:intergenic
GTGACCTAGGTATTTGTTTG+TGG 0.437568 7.1:-24600562 None:intergenic
AGAAATCCTATTGAGGTTGC+CGG 0.439306 7.1:+24600226 MS.gene024002:CDS
AATATGCAGTGCATTCATCT+TGG 0.443353 7.1:+24601065 MS.gene024002:CDS
AATCGTCCTTCCAACAAAGT+TGG 0.444065 7.1:+24600821 MS.gene024002:CDS
ATCGTCCTTCCAACAAAGTT+GGG 0.448542 7.1:+24600822 MS.gene024002:CDS
CTACACGAACCTCCGATTTG+AGG 0.448833 7.1:-24600479 None:intergenic
CACAATTTGTAAAGTATACT+AGG 0.449978 7.1:-24601132 None:intergenic
TGCATCAAAATCAATGGATA+AGG 0.452169 7.1:-24600393 None:intergenic
GCTATCTAGTTTGAGTAACT+TGG 0.455895 7.1:+24600721 MS.gene024002:CDS
CTCCGATTTGAGGATGTTGT+TGG 0.463805 7.1:-24600469 None:intergenic
ATGATTTGTTGGTGCTTGAT+GGG 0.469175 7.1:+24600987 MS.gene024002:CDS
ACAGGTGTGTTTGCAAATCA+TGG 0.470956 7.1:+24600267 MS.gene024002:CDS
CAAAAGGTTGTGTGTGGGTG+AGG 0.472240 7.1:-24600342 None:intergenic
ACTAAGTAATCATCAGTTGA+AGG 0.476546 7.1:-24600659 None:intergenic
AATCAATGGATAAGGTTTCA+GGG 0.476772 7.1:-24600385 None:intergenic
CTAGTATACTTTACAAATTG+TGG 0.480538 7.1:+24601133 MS.gene024002:CDS
CACCAACAACATCCTCAAAT+CGG 0.482160 7.1:+24600467 MS.gene024002:CDS
ACTAGGAAGAAGTCCGGATC+AGG 0.484951 7.1:-24601115 None:intergenic
AATCATGTCCTATGGACAAA+AGG 0.485590 7.1:-24600358 None:intergenic
GAAGTCCGGATCAGGATGTA+TGG 0.490826 7.1:-24601107 None:intergenic
GGCAATAATAACAACAATGT+TGG 0.492889 7.1:-24600891 None:intergenic
AAGAGATGCATCAAAATCAA+TGG 0.496420 7.1:-24600399 None:intergenic
AGGGAAACAATCATGTCCTA+TGG 0.504035 7.1:-24600366 None:intergenic
AGGTATTTGTTTGTGGACTC+CGG 0.506163 7.1:-24600555 None:intergenic
TGTCGTTTCCTTTAAATCAA+GGG 0.506960 7.1:-24600912 None:intergenic
GTGATCCATAAAATCAAGGA+TGG 0.510701 7.1:-24600447 None:intergenic
GAATGGGGCTATTCATTGGG+TGG 0.513164 7.1:+24600853 MS.gene024002:CDS
AACTGGAAACAAGTTGAGGT+TGG 0.514529 7.1:+24600767 MS.gene024002:CDS
TCAAATCGGAGGTTCGTGTA+GGG 0.517509 7.1:+24600481 MS.gene024002:CDS
CATGGATACAGTGGAGATAT+GGG 0.524392 7.1:+24601033 MS.gene024002:CDS
TTGGTGAAGTTTAATTACAA+AGG 0.525559 7.1:+24601187 MS.gene024002:CDS
AAGTATACTAGGAAGAAGTC+CGG 0.536637 7.1:-24601121 None:intergenic
AACAACCCAACTTTGTTGGA+AGG 0.537379 7.1:-24600827 None:intergenic
ATGAGAGATTCTCTAGCAGC+TGG 0.543433 7.1:-24601210 None:intergenic
AATGCTATAATGACTATGAT+CGG 0.553176 7.1:+24600699 MS.gene024002:CDS
AAATCGGAGGTTCGTGTAGG+GGG 0.555926 7.1:+24600483 MS.gene024002:CDS
TGTTTGTGGACTCCGGTGGA+TGG 0.562979 7.1:-24600548 None:intergenic
TGACCAATCAAACGCCGGTA+GGG 0.568769 7.1:-24601294 None:intergenic
CCAATAGTCATAGGTGACCT+AGG 0.574680 7.1:-24600575 None:intergenic
TTGATGGGCTTGTTAGTGCA+TGG 0.575399 7.1:+24601002 MS.gene024002:CDS
AGTTGGGTTGTTCTTGAATG+GGG 0.579967 7.1:+24600838 MS.gene024002:CDS
TAACGTAGTACATACTTCAC+CGG 0.582782 7.1:-24600245 None:intergenic
GTTGGTGATCCATAAAATCA+AGG 0.583053 7.1:-24600451 None:intergenic
TCCATAAAATCAAGGATGGG+TGG 0.589372 7.1:-24600443 None:intergenic
TAGTGCATGGACTGTGGACA+TGG 0.590800 7.1:+24601015 MS.gene024002:CDS
GGTGATATAGTTGGAACAGA+TGG 0.594143 7.1:+24601154 MS.gene024002:CDS
TTGACCAATCAAACGCCGGT+AGG 0.594456 7.1:-24601295 None:intergenic
CAAATCGGAGGTTCGTGTAG+GGG 0.594552 7.1:+24600482 MS.gene024002:CDS
TGATAACAGAAATCCTATTG+AGG 0.606738 7.1:+24600219 MS.gene024002:CDS
TATCTATGGAATCCATCCAC+CGG 0.610615 7.1:+24600536 MS.gene024002:CDS
CTCAAATCGGAGGTTCGTGT+AGG 0.620092 7.1:+24600480 MS.gene024002:CDS
TATGGACAAAAGGTTGTGTG+TGG 0.630555 7.1:-24600348 None:intergenic
TCTCTGCTTTCACTCCCTAC+CGG 0.631705 7.1:+24601280 MS.gene024002:CDS
TTCATTGACCAATCAAACGC+CGG 0.633561 7.1:-24601299 None:intergenic
TATTTGTTTGTGGACTCCGG+TGG 0.635344 7.1:-24600552 None:intergenic
TAATAACTGGAAACAAGTTG+AGG 0.646892 7.1:+24600763 MS.gene024002:CDS
AAGCAGAGACTCTGTATACA+CGG 0.652046 7.1:-24601266 None:intergenic
GAGTCCACAAACAAATACCT+AGG 0.656423 7.1:+24600558 MS.gene024002:CDS
TGATCCATAAAATCAAGGAT+GGG 0.658623 7.1:-24600446 None:intergenic
AAGGTTGTGTGTGGGTGAGG+CGG 0.658631 7.1:-24600339 None:intergenic
GACTGTGGACATGGATACAG+TGG 0.664275 7.1:+24601024 MS.gene024002:CDS
CAACAACATCCTCAAATCGG+AGG 0.684331 7.1:+24600470 MS.gene024002:CDS
GCTTGTTAGTGCATGGACTG+TGG 0.689938 7.1:+24601009 MS.gene024002:CDS
ATGGACAAAAGGTTGTGTGT+GGG 0.716607 7.1:-24600347 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTAAGGTTTTTGTA+TGG + chr7.1:24600623-24600642 MS.gene024002:CDS 15.0%
!! ATAGTCATTATAGCATTTAT+AGG - chr7.1:24600696-24600715 None:intergenic 20.0%
!! TTAGTATTAATGACCATATA+AGG - chr7.1:24600803-24600822 None:intergenic 20.0%
!!! ATGATTACTTAGTAGTTTTA+GGG + chr7.1:24600669-24600688 MS.gene024002:CDS 20.0%
!!! TTCTATACAATATGATTTGT+TGG + chr7.1:24600976-24600995 MS.gene024002:CDS 20.0%
! AAAGTGTAAAGTTGCAAAAT+TGG - chr7.1:24600312-24600331 None:intergenic 25.0%
! AAGTGTAAAGTTGCAAAATT+GGG - chr7.1:24600311-24600330 None:intergenic 25.0%
! AATGCTATAATGACTATGAT+CGG + chr7.1:24600699-24600718 MS.gene024002:CDS 25.0%
! CACAATTTGTAAAGTATACT+AGG - chr7.1:24601135-24601154 None:intergenic 25.0%
! CTAGTATACTTTACAAATTG+TGG + chr7.1:24601133-24601152 MS.gene024002:CDS 25.0%
! TAAGTAACACAAAAATCATC+TGG - chr7.1:24600956-24600975 None:intergenic 25.0%
! TATTATTGCCCTTGATTTAA+AGG + chr7.1:24600904-24600923 MS.gene024002:CDS 25.0%
! TTGGTGAAGTTTAATTACAA+AGG + chr7.1:24601187-24601206 MS.gene024002:CDS 25.0%
! TTTAAAGGAAACGACAATAT+CGG + chr7.1:24600919-24600938 MS.gene024002:CDS 25.0%
!! GATGATTACTTAGTAGTTTT+AGG + chr7.1:24600668-24600687 MS.gene024002:CDS 25.0%
!! TGGTTTTCATTTACCTTATA+TGG + chr7.1:24600787-24600806 MS.gene024002:CDS 25.0%
!! TTCTCAATCGCAATATTTTA+AGG + chr7.1:24600612-24600631 MS.gene024002:CDS 25.0%
AAATCAATGGATAAGGTTTC+AGG - chr7.1:24600389-24600408 None:intergenic 30.0%
AACAGATGGTTATGATGAAT+TGG + chr7.1:24601168-24601187 MS.gene024002:CDS 30.0%
AAGAGATGCATCAAAATCAA+TGG - chr7.1:24600402-24600421 None:intergenic 30.0%
AATCAATGGATAAGGTTTCA+GGG - chr7.1:24600388-24600407 None:intergenic 30.0%
ACAAATTGTGGTGATATAGT+TGG + chr7.1:24601145-24601164 MS.gene024002:CDS 30.0%
ACTAAGTAATCATCAGTTGA+AGG - chr7.1:24600662-24600681 None:intergenic 30.0%
GGCAATAATAACAACAATGT+TGG - chr7.1:24600894-24600913 None:intergenic 30.0%
TAATAACTGGAAACAAGTTG+AGG + chr7.1:24600763-24600782 MS.gene024002:CDS 30.0%
TGATAACAGAAATCCTATTG+AGG + chr7.1:24600219-24600238 MS.gene024002:CDS 30.0%
TGATCCATAAAATCAAGGAT+GGG - chr7.1:24600449-24600468 None:intergenic 30.0%
TGCATCAAAATCAATGGATA+AGG - chr7.1:24600396-24600415 None:intergenic 30.0%
! TGTCGTTTCCTTTAAATCAA+GGG - chr7.1:24600915-24600934 None:intergenic 30.0%
! TTGTCGTTTCCTTTAAATCA+AGG - chr7.1:24600916-24600935 None:intergenic 30.0%
!! GATTTTGATGCATCTCTTAA+CGG + chr7.1:24600404-24600423 MS.gene024002:CDS 30.0%
!!! TTTTTCAGGTAGATCCAAAA+TGG + chr7.1:24601243-24601262 MS.gene024002:CDS 30.0%
AAGTATACTAGGAAGAAGTC+CGG - chr7.1:24601124-24601143 None:intergenic 35.0%
AATATGCAGTGCATTCATCT+TGG + chr7.1:24601065-24601084 MS.gene024002:CDS 35.0%
AATCATGTCCTATGGACAAA+AGG - chr7.1:24600361-24600380 None:intergenic 35.0%
AGCTTGATTCCAATAGTCAT+AGG - chr7.1:24600587-24600606 None:intergenic 35.0%
AGGATTTCTGTTATCACTTC+CGG - chr7.1:24600215-24600234 None:intergenic 35.0%
GTGATCCATAAAATCAAGGA+TGG - chr7.1:24600450-24600469 None:intergenic 35.0%
TAACGTAGTACATACTTCAC+CGG - chr7.1:24600248-24600267 None:intergenic 35.0%
TCTCATTGAGAGCTAATAAC+TGG + chr7.1:24600750-24600769 MS.gene024002:CDS 35.0%
TGAAGTATGTACTACGTTAC+AGG + chr7.1:24600249-24600268 MS.gene024002:CDS 35.0%
! AAAGTTGGGTTGTTCTTGAA+TGG + chr7.1:24600836-24600855 MS.gene024002:CDS 35.0%
! AAGTTGGGTTGTTCTTGAAT+GGG + chr7.1:24600837-24600856 MS.gene024002:CDS 35.0%
! GCTATCTAGTTTGAGTAACT+TGG + chr7.1:24600721-24600740 MS.gene024002:CDS 35.0%
! TTTTTCCATACATCCTGATC+CGG + chr7.1:24601102-24601121 MS.gene024002:CDS 35.0%
!! ATGATTTGTTGGTGCTTGAT+GGG + chr7.1:24600987-24601006 MS.gene024002:CDS 35.0%
!! GTTGGTGATCCATAAAATCA+AGG - chr7.1:24600454-24600473 None:intergenic 35.0%
!! TATGATTTGTTGGTGCTTGA+TGG + chr7.1:24600986-24601005 MS.gene024002:CDS 35.0%
!!! TCATATCGTAGCTGTTTTTC+AGG + chr7.1:24601229-24601248 MS.gene024002:CDS 35.0%
AACAACCCAACTTTGTTGGA+AGG - chr7.1:24600830-24600849 None:intergenic 40.0%
AAGCAGAGACTCTGTATACA+CGG - chr7.1:24601269-24601288 None:intergenic 40.0%
AATCGTCCTTCCAACAAAGT+TGG + chr7.1:24600821-24600840 MS.gene024002:CDS 40.0%
ACAGGTGTGTTTGCAAATCA+TGG + chr7.1:24600267-24600286 MS.gene024002:CDS 40.0%
ACATGGATACAGTGGAGATA+TGG + chr7.1:24601032-24601051 MS.gene024002:CDS 40.0%
AGAAATCCTATTGAGGTTGC+CGG + chr7.1:24600226-24600245 MS.gene024002:CDS 40.0%
AGGGAAACAATCATGTCCTA+TGG - chr7.1:24600369-24600388 None:intergenic 40.0%
AGGTATTTGTTTGTGGACTC+CGG - chr7.1:24600558-24600577 None:intergenic 40.0%
ATCGTCCTTCCAACAAAGTT+GGG + chr7.1:24600822-24600841 MS.gene024002:CDS 40.0%
ATGGACAAAAGGTTGTGTGT+GGG - chr7.1:24600350-24600369 None:intergenic 40.0%
CAAGAACAACCCAACTTTGT+TGG - chr7.1:24600834-24600853 None:intergenic 40.0%
CACCAACAACATCCTCAAAT+CGG + chr7.1:24600467-24600486 MS.gene024002:CDS 40.0%
CATGGATACAGTGGAGATAT+GGG + chr7.1:24601033-24601052 MS.gene024002:CDS 40.0%
CTGACAAAGGCTTCTATCTA+TGG + chr7.1:24600522-24600541 MS.gene024002:CDS 40.0%
CTTGAATGGGGCTATTCATT+GGG + chr7.1:24600850-24600869 MS.gene024002:CDS 40.0%
GAGTCCACAAACAAATACCT+AGG + chr7.1:24600558-24600577 MS.gene024002:CDS 40.0%
GGTGATATAGTTGGAACAGA+TGG + chr7.1:24601154-24601173 MS.gene024002:CDS 40.0%
GTGACCTAGGTATTTGTTTG+TGG - chr7.1:24600565-24600584 None:intergenic 40.0%
TATCTATGGAATCCATCCAC+CGG + chr7.1:24600536-24600555 MS.gene024002:CDS 40.0%
TATGGACAAAAGGTTGTGTG+TGG - chr7.1:24600351-24600370 None:intergenic 40.0%
TCCATAAAATCAAGGATGGG+TGG - chr7.1:24600446-24600465 None:intergenic 40.0%
TCTTGAATGGGGCTATTCAT+TGG + chr7.1:24600849-24600868 MS.gene024002:CDS 40.0%
! AACTGGAAACAAGTTGAGGT+TGG + chr7.1:24600767-24600786 MS.gene024002:CDS 40.0%
! ACACACAACCTTTTGTCCAT+AGG + chr7.1:24600350-24600369 MS.gene024002:CDS 40.0%
! AGTTGGGTTGTTCTTGAATG+GGG + chr7.1:24600838-24600857 MS.gene024002:CDS 40.0%
! TCCACCCATCCTTGATTTTA+TGG + chr7.1:24600442-24600461 MS.gene024002:CDS 40.0%
!! GTGTTTTTGCACTCTGACAA+AGG + chr7.1:24600509-24600528 MS.gene024002:CDS 40.0%
ATGAGAGATTCTCTAGCAGC+TGG - chr7.1:24601213-24601232 None:intergenic 45.0%
CAACAACATCCTCAAATCGG+AGG + chr7.1:24600470-24600489 MS.gene024002:CDS 45.0%
CCAATAGTCATAGGTGACCT+AGG - chr7.1:24600578-24600597 None:intergenic 45.0%
CCTAGGTCACCTATGACTAT+TGG + chr7.1:24600575-24600594 MS.gene024002:CDS 45.0%
TATTTGTTTGTGGACTCCGG+TGG - chr7.1:24600555-24600574 None:intergenic 45.0%
TCAAATCGGAGGTTCGTGTA+GGG + chr7.1:24600481-24600500 MS.gene024002:CDS 45.0%
! CTCCGATTTGAGGATGTTGT+TGG - chr7.1:24600472-24600491 None:intergenic 45.0%
! CTCTGTATACACGGCCATTT+TGG - chr7.1:24601260-24601279 None:intergenic 45.0%
!! TTGATGGGCTTGTTAGTGCA+TGG + chr7.1:24601002-24601021 MS.gene024002:CDS 45.0%
AAATCGGAGGTTCGTGTAGG+GGG + chr7.1:24600483-24600502 MS.gene024002:CDS 50.0%
ACTAGGAAGAAGTCCGGATC+AGG - chr7.1:24601118-24601137 None:intergenic 50.0%
ACTTCACCGGCAACCTCAAT+AGG - chr7.1:24600235-24600254 None:intergenic 50.0%
CAAAAGGTTGTGTGTGGGTG+AGG - chr7.1:24600345-24600364 None:intergenic 50.0%
CAAATCGGAGGTTCGTGTAG+GGG + chr7.1:24600482-24600501 MS.gene024002:CDS 50.0%
CTCAAATCGGAGGTTCGTGT+AGG + chr7.1:24600480-24600499 MS.gene024002:CDS 50.0%
GAAGTCCGGATCAGGATGTA+TGG - chr7.1:24601110-24601129 None:intergenic 50.0%
GAATGGGGCTATTCATTGGG+TGG + chr7.1:24600853-24600872 MS.gene024002:CDS 50.0%
GACTGTGGACATGGATACAG+TGG + chr7.1:24601024-24601043 MS.gene024002:CDS 50.0%
TCTCTGCTTTCACTCCCTAC+CGG + chr7.1:24601280-24601299 MS.gene024002:CDS 50.0%
! AAGAAGCGTGCATCTGCTTC+CGG + chr7.1:24600193-24600212 MS.gene024002:CDS 50.0%
! CTACACGAACCTCCGATTTG+AGG - chr7.1:24600482-24600501 None:intergenic 50.0%
! GCTTGTTAGTGCATGGACTG+TGG + chr7.1:24601009-24601028 MS.gene024002:CDS 50.0%
! TAGTGCATGGACTGTGGACA+TGG + chr7.1:24601015-24601034 MS.gene024002:CDS 50.0%
AAGGTTGTGTGTGGGTGAGG+CGG - chr7.1:24600342-24600361 None:intergenic 55.0%
TGTTTGTGGACTCCGGTGGA+TGG - chr7.1:24600551-24600570 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 24600182 24601309 24600182 ID=MS.gene024002
chr7.1 mRNA 24600182 24601309 24600182 ID=MS.gene024002.t1;Parent=MS.gene024002
chr7.1 exon 24600182 24601309 24600182 ID=MS.gene024002.t1.exon1;Parent=MS.gene024002.t1
chr7.1 CDS 24600182 24601309 24600182 ID=cds.MS.gene024002.t1;Parent=MS.gene024002.t1
Gene Sequence

>MS.gene024002

ATGGCTGAGAGAAGAAGCGTGCATCTGCTTCCGGAAGTGATAACAGAAATCCTATTGAGGTTGCCGGTGAAGTATGTACTACGTTACAGGTGTGTTTGCAAATCATGGCTGTCTCTCATCTCTCATCCCAATTTTGCAACTTTACACTTTAATCTTGCCGCCTCACCCACACACAACCTTTTGTCCATAGGACATGATTGTTTCCCTGAAACCTTATCCATTGATTTTGATGCATCTCTTAACGGTGATTCTGCTTATGTTCCACCCATCCTTGATTTTATGGATCACCAACAACATCCTCAAATCGGAGGTTCGTGTAGGGGGTTTGTGTTTTTGCACTCTGACAAAGGCTTCTATCTATGGAATCCATCCACCGGAGTCCACAAACAAATACCTAGGTCACCTATGACTATTGGAATCAAGCTAAATATTCTCAATCGCAATATTTTAAGGTTTTTGTATGGCTTTGCATACGAACCTTCAACTGATGATTACTTAGTAGTTTTAGGGTCCTATAAATGCTATAATGACTATGATCGGCTATCTAGTTTGAGTAACTTGGAGATTTTCTCATTGAGAGCTAATAACTGGAAACAAGTTGAGGTTGGTTTTCATTTACCTTATATGGTCATTAATACTAATCGTCCTTCCAACAAAGTTGGGTTGTTCTTGAATGGGGCTATTCATTGGGTGGTTCATAATCATGAGACCAACATTGTTGTTATTATTGCCCTTGATTTAAAGGAAACGACAATATCGGAGATAGCTCTGCCAGATGATTTTTGTGTTACTTATTCTATACAATATGATTTGTTGGTGCTTGATGGGCTTGTTAGTGCATGGACTGTGGACATGGATACAGTGGAGATATGGGTGATGCAAGAATATGCAGTGCATTCATCTTGGATTAAAACTCTTGTTTTTTCCATACATCCTGATCCGGACTTCTTCCTAGTATACTTTACAAATTGTGGTGATATAGTTGGAACAGATGGTTATGATGAATTGGTGAAGTTTAATTACAAAGGCCAGCTGCTAGAGAATCTCTCATATCGTAGCTGTTTTTCAGGTAGATCCAAAATGGCCGTGTATACAGAGTCTCTGCTTTCACTCCCTACCGGCGTTTGA

Protein sequence

>MS.gene024002.t1

MAERRSVHLLPEVITEILLRLPVKYVLRYRCVCKSWLSLISHPNFATLHFNLAASPTHNLLSIGHDCFPETLSIDFDASLNGDSAYVPPILDFMDHQQHPQIGGSCRGFVFLHSDKGFYLWNPSTGVHKQIPRSPMTIGIKLNILNRNILRFLYGFAYEPSTDDYLVVLGSYKCYNDYDRLSSLSNLEIFSLRANNWKQVEVGFHLPYMVINTNRPSNKVGLFLNGAIHWVVHNHETNIVVIIALDLKETTISEIALPDDFCVTYSIQYDLLVLDGLVSAWTVDMDTVEIWVMQEYAVHSSWIKTLVFSIHPDPDFFLVYFTNCGDIVGTDGYDELVKFNYKGQLLENLSYRSCFSGRSKMAVYTESLLSLPTGV