AlfalfaGEDB | MS.gene036662

M. sativa cultivar XinJiangDaYe / MS.gene036662

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene036662.t1	XP_003609494.2	93.4	197	13	0	1	197	184	380	6.10E-107	396.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene036662.t1	G7JGN1	93.4	197	13	0	1	197	184	380	4.4e-107	396.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene066641	MS.gene036662	PPI
MS.gene000038	MS.gene036662	PPI
MS.gene036662	MS.gene041489	PPI
MS.gene036662	MS.gene38220	PPI
MS.gene57531	MS.gene036662	PPI
MS.gene036662	MS.gene40986	PPI
MS.gene036662	MS.gene041394	PPI
MS.gene036662	MS.gene034688	PPI
MS.gene39262	MS.gene036662	PPI
MS.gene036662	MS.gene03060	PPI
MS.gene036662	MS.gene24213	PPI
MS.gene036662	MS.gene033440	PPI
MS.gene57535	MS.gene036662	PPI
MS.gene025887	MS.gene036662	PPI
MS.gene036662	MS.gene024011	PPI
MS.gene036662	MS.gene58241	PPI
MS.gene041470	MS.gene036662	PPI
MS.gene036662	MS.gene064109	PPI
MS.gene058694	MS.gene036662	PPI
MS.gene036662	MS.gene058696	PPI
MS.gene036662	MS.gene035238	PPI
MS.gene036662	MS.gene85043	PPI
MS.gene036662	MS.gene064114	PPI
MS.gene015089	MS.gene036662	PPI
MS.gene006710	MS.gene036662	PPI
MS.gene44885	MS.gene036662	PPI
MS.gene011679	MS.gene036662	PPI
MS.gene036662	MS.gene80610	PPI
MS.gene060370	MS.gene036662	PPI
MS.gene036662	MS.gene033083	PPI
MS.gene64001	MS.gene036662	PPI
MS.gene57533	MS.gene036662	PPI
MS.gene036662	MS.gene40886	PPI
MS.gene032970	MS.gene036662	PPI
MS.gene77856	MS.gene036662	PPI
MS.gene036662	MS.gene041391	PPI
MS.gene036662	MS.gene033443	PPI
MS.gene40887	MS.gene036662	PPI
MS.gene50339	MS.gene036662	PPI
MS.gene060366	MS.gene036662	PPI
MS.gene036662	MS.gene045474	PPI
MS.gene036662	MS.gene058701	PPI
MS.gene036662	MS.gene036558	PPI
MS.gene036662	MS.gene87554	PPI
MS.gene036662	MS.gene009891	PPI
MS.gene036662	MS.gene27051	PPI
MS.gene57529	MS.gene036662	PPI
MS.gene036662	MS.gene064108	PPI
MS.gene036662	MS.gene048193	PPI
MS.gene80884	MS.gene036662	PPI
MS.gene036662	MS.gene016220	PPI
MS.gene036662	MS.gene024008	PPI
MS.gene036662	MS.gene50337	PPI
MS.gene40902	MS.gene036662	PPI
MS.gene036662	MS.gene053299	PPI
MS.gene27051	MS.gene036662	PPI
MS.gene060368	MS.gene036662	PPI
MS.gene033875	MS.gene036662	PPI
MS.gene27020	MS.gene036662	PPI
MS.gene036662	MS.gene58240	PPI
MS.gene066620	MS.gene036662	PPI
MS.gene035236	MS.gene036662	PPI
MS.gene036662	MS.gene27284	PPI
MS.gene036662	MS.gene57717	PPI
MS.gene036662	MS.gene48221	PPI
MS.gene51208	MS.gene036662	PPI
MS.gene028390	MS.gene036662	PPI
MS.gene011106	MS.gene036662	PPI
MS.gene62398	MS.gene036662	PPI
MS.gene60027	MS.gene036662	PPI
MS.gene045475	MS.gene036662	PPI
MS.gene038756	MS.gene036662	PPI
MS.gene88776	MS.gene036662	PPI
MS.gene036662	MS.gene51190	PPI
MS.gene036662	MS.gene58319	PPI
MS.gene036662	MS.gene044426	PPI
MS.gene35068	MS.gene036662	PPI
MS.gene036662	MS.gene034681	PPI
MS.gene041390	MS.gene036662	PPI
MS.gene90744	MS.gene036662	PPI
MS.gene24286	MS.gene036662	PPI
MS.gene92376	MS.gene036662	PPI
MS.gene000035	MS.gene036662	PPI
MS.gene50329	MS.gene036662	PPI
MS.gene036662	MS.gene57532	PPI
MS.gene31637	MS.gene036662	PPI
MS.gene036662	MS.gene033442	PPI
MS.gene87573	MS.gene036662	PPI
MS.gene57537	MS.gene036662	PPI
MS.gene019504	MS.gene036662	PPI
MS.gene034762	MS.gene036662	PPI
MS.gene059156	MS.gene036662	PPI
MS.gene036662	MS.gene44428	PPI
MS.gene036662	MS.gene058669	PPI
MS.gene036662	MS.gene066120	PPI
MS.gene82082	MS.gene036662	PPI
MS.gene036662	MS.gene035235	PPI
MS.gene033444	MS.gene036662	PPI
MS.gene50306	MS.gene036662	PPI
MS.gene036662	MS.gene024000	PPI
MS.gene036662	MS.gene012215	PPI
MS.gene26949	MS.gene036662	PPI
MS.gene036662	MS.gene033079	PPI
MS.gene50309	MS.gene036662	PPI
MS.gene036662	MS.gene034677	PPI
MS.gene036662	MS.gene055694	PPI
MS.gene036662	MS.gene059101	PPI
MS.gene87200	MS.gene036662	PPI
MS.gene58311	MS.gene036662	PPI
MS.gene036662	MS.gene58316	PPI
MS.gene033432	MS.gene036662	PPI
MS.gene036662	MS.gene87584	PPI
MS.gene036662	MS.gene58321	PPI
MS.gene036662	MS.gene87564	PPI
MS.gene036662	MS.gene58315	PPI
MS.gene59639	MS.gene036662	PPI
MS.gene50327	MS.gene036662	PPI
MS.gene066635	MS.gene036662	PPI
MS.gene036662	MS.gene90743	PPI
MS.gene010758	MS.gene036662	PPI
MS.gene036662	MS.gene50311	PPI
MS.gene87586	MS.gene036662	PPI
MS.gene036662	MS.gene85454	PPI
MS.gene57530	MS.gene036662	PPI
MS.gene036662	MS.gene036556	PPI
MS.gene50326	MS.gene036662	PPI
MS.gene036662	MS.gene57538	PPI
MS.gene036662	MS.gene058693	PPI
MS.gene51200	MS.gene036662	PPI
MS.gene036662	MS.gene27319	PPI
MS.gene046958	MS.gene036662	PPI
MS.gene036662	MS.gene041395	PPI
MS.gene88774	MS.gene036662	PPI
MS.gene036662	MS.gene24286	PPI
MS.gene036662	MS.gene064083	PPI
MS.gene42452	MS.gene036662	PPI
MS.gene063414	MS.gene036662	PPI
MS.gene036662	MS.gene58783	PPI
MS.gene036662	MS.gene024420	PPI
MS.gene036662	MS.gene40988	PPI
MS.gene036662	MS.gene54541	PPI
MS.gene036662	MS.gene39265	PPI
MS.gene036662	MS.gene24173	PPI
MS.gene036662	MS.gene036584	PPI
MS.gene87563	MS.gene036662	PPI
MS.gene57526	MS.gene036662	PPI
MS.gene036662	MS.gene060368	PPI
MS.gene036662	MS.gene28758	PPI
MS.gene036662	MS.gene044429	PPI
MS.gene036662	MS.gene42451	PPI
MS.gene021553	MS.gene036662	PPI
MS.gene051820	MS.gene036662	PPI
MS.gene26957	MS.gene036662	PPI
MS.gene97996	MS.gene036662	PPI
MS.gene036582	MS.gene036662	PPI
MS.gene27021	MS.gene036662	PPI
MS.gene58320	MS.gene036662	PPI
MS.gene26101	MS.gene036662	PPI
MS.gene27283	MS.gene036662	PPI
MS.gene045140	MS.gene036662	PPI
MS.gene036662	MS.gene69307	PPI
MS.gene024004	MS.gene036662	PPI
MS.gene58781	MS.gene036662	PPI
MS.gene42444	MS.gene036662	PPI
MS.gene033440	MS.gene036662	PPI
MS.gene036662	MS.gene036581	PPI
MS.gene036662	MS.gene019507	PPI
MS.gene036662	MS.gene033431	PPI
MS.gene44886	MS.gene036662	PPI
MS.gene87562	MS.gene036662	PPI
MS.gene40904	MS.gene036662	PPI
MS.gene036662	MS.gene034762	PPI
MS.gene036662	MS.gene59943	PPI
MS.gene036662	MS.gene50320	PPI
MS.gene036662	MS.gene58314	PPI
MS.gene036662	MS.gene87557	PPI
MS.gene87569	MS.gene036662	PPI
MS.gene036662	MS.gene67501	PPI
MS.gene036662	MS.gene96406	PPI
MS.gene041491	MS.gene036662	PPI
MS.gene036662	MS.gene035262	PPI
MS.gene033443	MS.gene036662	PPI
MS.gene036662	MS.gene028390	PPI
MS.gene059096	MS.gene036662	PPI
MS.gene036662	MS.gene40878	PPI
MS.gene57528	MS.gene036662	PPI
MS.gene50297	MS.gene036662	PPI
MS.gene006711	MS.gene036662	PPI
MS.gene27285	MS.gene036662	PPI
MS.gene58716	MS.gene036662	PPI
MS.gene036662	MS.gene058703	PPI
MS.gene019505	MS.gene036662	PPI
MS.gene064112	MS.gene036662	PPI
MS.gene045476	MS.gene036662	PPI
MS.gene58785	MS.gene036662	PPI
MS.gene036662	MS.gene047279	PPI
MS.gene24208	MS.gene036662	PPI
MS.gene50307	MS.gene036662	PPI
MS.gene034690	MS.gene036662	PPI
MS.gene036662	MS.gene032969	PPI
MS.gene066639	MS.gene036662	PPI
MS.gene96407	MS.gene036662	PPI
MS.gene036760	MS.gene036662	PPI
MS.gene036662	MS.gene42445	PPI
MS.gene036662	MS.gene86273	PPI
MS.gene77857	MS.gene036662	PPI
MS.gene036662	MS.gene26830	PPI
MS.gene036662	MS.gene22715	PPI
MS.gene57527	MS.gene036662	PPI
MS.gene51191	MS.gene036662	PPI
MS.gene036662	MS.gene51207	PPI
MS.gene033426	MS.gene036662	PPI
MS.gene036662	MS.gene36595	PPI
MS.gene50298	MS.gene036662	PPI
MS.gene036662	MS.gene024004	PPI
MS.gene036662	MS.gene045140	PPI
MS.gene67687	MS.gene036662	PPI
MS.gene036662	MS.gene070462	PPI
MS.gene035261	MS.gene036662	PPI
MS.gene036662	MS.gene061240	PPI
MS.gene036662	MS.gene041473	PPI
MS.gene063670	MS.gene036662	PPI
MS.gene036662	MS.gene064086	PPI
MS.gene036662	MS.gene035234	PPI
MS.gene036662	MS.gene058989	PPI
MS.gene71159	MS.gene036662	PPI
MS.gene019506	MS.gene036662	PPI
MS.gene77858	MS.gene036662	PPI
MS.gene036662	MS.gene041468	PPI
MS.gene058692	MS.gene036662	PPI
MS.gene033083	MS.gene036662	PPI
MS.gene69309	MS.gene036662	PPI
MS.gene63658	MS.gene036662	PPI
MS.gene024002	MS.gene036662	PPI
MS.gene033081	MS.gene036662	PPI
MS.gene036662	MS.gene42447	PPI
MS.gene036662	MS.gene51189	PPI
MS.gene036662	MS.gene046958	PPI
MS.gene035262	MS.gene036662	PPI
MS.gene034686	MS.gene036662	PPI
MS.gene40982	MS.gene036662	PPI
MS.gene070461	MS.gene036662	PPI
MS.gene036662	MS.gene044425	PPI
MS.gene51199	MS.gene036662	PPI
MS.gene87559	MS.gene036662	PPI
MS.gene036662	MS.gene59637	PPI
MS.gene033431	MS.gene036662	PPI
MS.gene036662	MS.gene27022	PPI
MS.gene041475	MS.gene036662	PPI
MS.gene036662	MS.gene035261	PPI
MS.gene036662	MS.gene87585	PPI
MS.gene036662	MS.gene023999	PPI
MS.gene81242	MS.gene036662	PPI
MS.gene036662	MS.gene024009	PPI
MS.gene036662	MS.gene036599	PPI
MS.gene64203	MS.gene036662	PPI
MS.gene060367	MS.gene036662	PPI
MS.gene51202	MS.gene036662	PPI
MS.gene036662	MS.gene035237	PPI
MS.gene036662	MS.gene000036	PPI
MS.gene036662	MS.gene50309	PPI
MS.gene064111	MS.gene036662	PPI
MS.gene036662	MS.gene035263	PPI
MS.gene26829	MS.gene036662	PPI
MS.gene064104	MS.gene036662	PPI
MS.gene053256	MS.gene036662	PPI
MS.gene036662	MS.gene036664	PPI
MS.gene036662	MS.gene053257	PPI
MS.gene75875	MS.gene036662	PPI
MS.gene036662	MS.gene77858	PPI
MS.gene036662	MS.gene51201	PPI
MS.gene54049	MS.gene036662	PPI
MS.gene036662	MS.gene009893	PPI
MS.gene43789	MS.gene036662	PPI
MS.gene036662	MS.gene50336	PPI
MS.gene036662	MS.gene77704	PPI
MS.gene072177	MS.gene036662	PPI
MS.gene58722	MS.gene036662	PPI
MS.gene064091	MS.gene036662	PPI
MS.gene036662	MS.gene50305	PPI
MS.gene43796	MS.gene036662	PPI
MS.gene036662	MS.gene68890	PPI
MS.gene58312	MS.gene036662	PPI
MS.gene36704	MS.gene036662	PPI
MS.gene036662	MS.gene036663	PPI
MS.gene036662	MS.gene68580	PPI
MS.gene58313	MS.gene036662	PPI
MS.gene036662	MS.gene57525	PPI
MS.gene036662	MS.gene63657	PPI
MS.gene036662	MS.gene059157	PPI
MS.gene036662	MS.gene023996	PPI
MS.gene066622	MS.gene036662	PPI
MS.gene44887	MS.gene036662	PPI
MS.gene036662	MS.gene030114	PPI
MS.gene85043	MS.gene036662	PPI
MS.gene63655	MS.gene036662	PPI
MS.gene033430	MS.gene036662	PPI
MS.gene036662	MS.gene045473	PPI
MS.gene44883	MS.gene036662	PPI
MS.gene036662	MS.gene50301	PPI
MS.gene036662	MS.gene031590	PPI
MS.gene036583	MS.gene036662	PPI
MS.gene88780	MS.gene036662	PPI
MS.gene41046	MS.gene036662	PPI
MS.gene87588	MS.gene036662	PPI
MS.gene017412	MS.gene036662	PPI
MS.gene036662	MS.gene40984	PPI
MS.gene036662	MS.gene066623	PPI
MS.gene036662	MS.gene064090	PPI
MS.gene96448	MS.gene036662	PPI
MS.gene51192	MS.gene036662	PPI
MS.gene036662	MS.gene58317	PPI
MS.gene009883	MS.gene036662	PPI
MS.gene041392	MS.gene036662	PPI
MS.gene58317	MS.gene036662	PPI
MS.gene036662	MS.gene90742	PPI
MS.gene044563	MS.gene036662	PPI
MS.gene069075	MS.gene036662	PPI
MS.gene036662	MS.gene24212	PPI
MS.gene033427	MS.gene036662	PPI
MS.gene036662	MS.gene50332	PPI
MS.gene036662	MS.gene024979	PPI
MS.gene40985	MS.gene036662	PPI
MS.gene031591	MS.gene036662	PPI
MS.gene041474	MS.gene036662	PPI
MS.gene036662	MS.gene24826	PPI
MS.gene036662	MS.gene063472	PPI
MS.gene036662	MS.gene43790	PPI
MS.gene036662	MS.gene034680	PPI
MS.gene041388	MS.gene036662	PPI
MS.gene062698	MS.gene036662	PPI
MS.gene57536	MS.gene036662	PPI
MS.gene96126	MS.gene036662	PPI
MS.gene019503	MS.gene036662	PPI
MS.gene036662	MS.gene50327	PPI
MS.gene016524	MS.gene036662	PPI
MS.gene036662	MS.gene066626	PPI
MS.gene50304	MS.gene036662	PPI
MS.gene036662	MS.gene063474	PPI
MS.gene59943	MS.gene036662	PPI
MS.gene036662	MS.gene88416	PPI
MS.gene036662	MS.gene57530	PPI
MS.gene51204	MS.gene036662	PPI
MS.gene31587	MS.gene036662	PPI
MS.gene036557	MS.gene036662	PPI
MS.gene041393	MS.gene036662	PPI
MS.gene033441	MS.gene036662	PPI
MS.gene036662	MS.gene003076	PPI
MS.gene036662	MS.gene009892	PPI
MS.gene063826	MS.gene036662	PPI
MS.gene036662	MS.gene006705	PPI
MS.gene84698	MS.gene036662	PPI
MS.gene036662	MS.gene061241	PPI
MS.gene44892	MS.gene036662	PPI
MS.gene036662	MS.gene51188	PPI
MS.gene009891	MS.gene036662	PPI
MS.gene58239	MS.gene036662	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene036662.t1	MTR_4g116330	93.401	197	13	0	1	197	184	380	2.05e-134	381
MS.gene036662.t1	MTR_4g116330	74.619	197	11	1	1	197	184	341	3.62e-96	283
MS.gene036662.t1	MTR_4g116320	69.474	190	56	1	6	195	69	256	1.70e-90	266
MS.gene036662.t1	MTR_3g103020	63.077	195	67	2	6	197	186	378	2.09e-77	236
MS.gene036662.t1	MTR_8g040935	55.051	198	86	2	3	197	11	208	1.28e-70	213
MS.gene036662.t1	MTR_4g109280	58.549	193	76	3	6	197	170	359	4.05e-68	212
MS.gene036662.t1	MTR_6g060650	57.592	191	77	2	6	196	186	372	1.07e-67	211
MS.gene036662.t1	MTR_4g117850	59.067	193	73	4	6	194	186	376	1.48e-67	211
MS.gene036662.t1	MTR_4g117720	58.883	197	74	5	6	197	184	378	1.67e-67	211
MS.gene036662.t1	MTR_3g034180	56.566	198	74	5	6	196	296	488	7.65e-64	204
MS.gene036662.t1	MTR_4g094365	54.639	194	83	3	6	197	174	364	1.02e-62	198
MS.gene036662.t1	MTR_4g117780	53.061	196	86	3	6	197	174	367	4.08e-62	197
MS.gene036662.t1	MTR_4g023130	56.316	190	76	4	6	194	127	310	4.41e-62	195
MS.gene036662.t1	MTR_4g023080	55.263	190	78	4	6	194	168	351	1.23e-61	195
MS.gene036662.t1	MTR_3g034160	56.500	200	71	5	6	196	182	374	2.02e-61	195
MS.gene036662.t1	MTR_4g109270	54.872	195	82	3	6	197	173	364	2.07e-61	195
MS.gene036662.t1	MTR_4g023090	52.657	207	77	5	6	196	184	385	3.62e-61	195
MS.gene036662.t1	MTR_4g122850	53.465	202	79	8	4	197	170	364	7.38e-61	194
MS.gene036662.t1	MTR_4g021785	53.368	193	84	3	6	197	168	355	1.62e-59	190
MS.gene036662.t1	MTR_3g034130	53.968	189	75	4	6	184	182	368	1.07e-58	188
MS.gene036662.t1	MTR_4g117770	52.551	196	87	3	6	197	174	367	2.58e-58	187
MS.gene036662.t1	MTR_4g117810	52.551	196	87	3	6	197	174	367	2.58e-58	187
MS.gene036662.t1	MTR_4g118380	55.233	172	66	2	6	168	188	357	3.21e-58	187
MS.gene036662.t1	MTR_4g023380	50.463	216	78	6	6	197	169	379	3.00e-57	185
MS.gene036662.t1	MTR_6g463430	51.813	193	84	4	4	194	14	199	1.15e-56	178
MS.gene036662.t1	MTR_8g433030	53.158	190	81	5	6	192	153	337	4.05e-56	181
MS.gene036662.t1	MTR_4g023070	50.244	205	78	5	6	194	171	367	6.78e-56	181
MS.gene036662.t1	MTR_8g032390	53.158	190	81	5	6	192	186	370	1.22e-55	180
MS.gene036662.t1	MTR_4g023120	49.268	205	80	5	6	194	171	367	5.89e-53	173
MS.gene036662.t1	MTR_4g118400	47.872	188	78	4	6	191	125	294	7.24e-52	168
MS.gene036662.t1	MTR_5g097210	50.510	196	83	7	6	195	174	361	1.23e-49	165
MS.gene036662.t1	MTR_4g023200	52.356	191	80	6	9	194	173	357	2.37e-49	164
MS.gene036662.t1	MTR_1g055175	46.341	205	95	7	1	197	4	201	5.37e-49	158
MS.gene036662.t1	MTR_4g023190	52.062	194	81	6	6	194	170	356	7.85e-49	162
MS.gene036662.t1	MTR_8g433040	48.969	194	83	4	6	197	185	364	1.30e-48	162
MS.gene036662.t1	MTR_8g032380	48.969	194	83	4	6	197	185	364	1.30e-48	162
MS.gene036662.t1	MTR_4g023150	51.031	194	84	6	6	194	170	357	4.05e-48	160
MS.gene036662.t1	MTR_4g117870	47.917	192	62	4	6	197	114	267	5.80e-48	157
MS.gene036662.t1	MTR_5g070080	49.746	197	88	5	6	197	196	386	5.78e-46	155
MS.gene036662.t1	MTR_1g055135	47.264	201	86	8	9	197	183	375	1.64e-45	154
MS.gene036662.t1	MTR_4g023440	45.833	192	62	4	6	197	183	332	2.04e-45	153
MS.gene036662.t1	MTR_1g055195	45.755	212	89	8	1	197	278	478	1.38e-44	154
MS.gene036662.t1	MTR_4g118370	45.361	194	77	6	6	194	88	257	7.15e-43	144
MS.gene036662.t1	MTR_5g070130	46.040	202	97	5	6	197	178	377	7.96e-43	147
MS.gene036662.t1	MTR_4g117530	43.299	194	71	4	6	197	97	253	8.70e-43	144
MS.gene036662.t1	MTR_4g117750	47.236	199	88	6	6	193	163	355	5.24e-42	147
MS.gene036662.t1	MTR_4g117750	62.727	110	39	1	85	194	373	480	1.98e-36	132
MS.gene036662.t1	MTR_1g055165	48.214	168	76	5	34	197	158	318	8.83e-42	143
MS.gene036662.t1	MTR_5g070088	46.597	191	94	4	6	192	194	380	1.56e-41	144
MS.gene036662.t1	MTR_1g055250	47.826	184	83	7	6	184	78	253	7.48e-41	141
MS.gene036662.t1	MTR_4g118360	56.818	132	47	4	70	197	1	126	2.33e-39	131
MS.gene036662.t1	MTR_5g023000	65.000	100	33	1	98	197	2	99	1.74e-38	128
MS.gene036662.t1	MTR_4g122860	42.708	192	77	5	11	197	157	320	2.63e-37	132
MS.gene036662.t1	MTR_7g079370	43.590	195	100	6	2	191	161	350	1.14e-35	128
MS.gene036662.t1	MTR_7g079400	44.118	204	95	8	6	197	141	337	2.34e-35	127
MS.gene036662.t1	MTR_8g102520	42.500	200	100	7	6	197	130	322	3.99e-34	123
MS.gene036662.t1	MTR_4g121580	43.850	187	67	7	6	187	186	339	4.93e-33	122
MS.gene036662.t1	MTR_4g114700	39.785	186	61	4	6	188	81	218	1.89e-29	109
MS.gene036662.t1	MTR_8g098830	44.311	167	78	7	6	164	35	194	2.31e-29	108
MS.gene036662.t1	MTR_2g048580	36.715	207	94	10	6	197	158	342	7.86e-26	102
MS.gene036662.t1	MTR_8g013010	53.684	95	40	1	6	100	225	315	1.26e-24	98.6
MS.gene036662.t1	MTR_7g117720	53.704	108	45	3	90	192	165	272	7.39e-24	95.5
MS.gene036662.t1	MTR_7g079450	44.595	148	63	6	56	197	3	137	3.21e-23	90.5
MS.gene036662.t1	MTR_4g117430	51.087	92	42	2	6	96	65	154	4.36e-23	90.5
MS.gene036662.t1	MTR_7g079420	39.474	190	95	9	19	197	964	1144	1.18e-22	95.1
MS.gene036662.t1	MTR_4g122840	42.029	138	42	4	61	197	164	264	2.81e-22	91.3
MS.gene036662.t1	MTR_4g023430	55.556	81	35	1	118	197	142	222	9.59e-22	89.0
MS.gene036662.t1	MTR_8g013005	64.516	62	18	2	137	197	1	59	1.06e-20	81.6
MS.gene036662.t1	MTR_2g426020	29.208	202	129	7	4	196	189	385	4.68e-19	84.3
MS.gene036662.t1	MTR_4g109290	65.455	55	17	1	143	197	136	188	6.34e-15	70.1
MS.gene036662.t1	MTR_2g024110	28.638	213	115	11	6	194	171	370	8.09e-15	72.0
MS.gene036662.t1	MTR_4g023100	58.621	58	20	1	139	196	65	118	1.30e-14	67.4
MS.gene036662.t1	MTR_6g090180	26.042	192	131	4	3	190	250	434	7.91e-14	69.3
MS.gene036662.t1	MTR_6g034720	47.887	71	37	0	6	76	104	174	3.65e-13	65.9
MS.gene036662.t1	MTR_3g083010	28.019	207	133	6	4	196	198	402	5.01e-13	67.0
MS.gene036662.t1	MTR_2g025960	28.500	200	127	8	6	194	99	293	4.81e-12	63.9
MS.gene036662.t1	MTR_2g028130	26.699	206	132	8	4	194	193	394	9.96e-12	63.2
MS.gene036662.t1	MTR_4g116340	53.448	58	27	0	3	60	190	247	2.78e-11	61.2
MS.gene036662.t1	MTR_4g133170	29.677	155	98	7	6	155	174	322	4.52e-11	61.2
MS.gene036662.t1	MTR_8g101580	23.936	188	130	4	7	189	215	394	5.56e-11	60.8
MS.gene036662.t1	MTR_2g425980	28.500	200	124	9	7	194	191	383	6.47e-11	60.8
MS.gene036662.t1	MTR_8g099460	26.786	168	113	6	6	167	185	348	9.92e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene036662.t1	AT3G06240	28.261	184	122	4	9	189	243	419	6.68e-14	69.7

Find 48 sgRNAs with CRISPR-Local

Find 55 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATAATTGCATTTGATTTAA+TGG	0.100322	8.1:+10682502	MS.gene036662:CDS
TTGGAGAATTTCTTAGTTTA+AGG	0.125843	8.1:+10682597	MS.gene036662:CDS
AATTGTAATTTGTGGGTATT+TGG	0.172259	8.1:+10682578	MS.gene036662:CDS
TGTCATTATACTTCAGTAAT+TGG	0.202744	8.1:-10682790	None:intergenic
TGTAGAGCATATTGGGTAAA+AGG	0.229942	8.1:-10682732	None:intergenic
TTCTAGAGCATGTATCATTC+TGG	0.290134	8.1:+10682822	MS.gene036662:CDS
ACTCTTGTTCTTCCTATTGA+TGG	0.297614	8.1:+10682695	MS.gene036662:CDS
TCAGAAGCATAGAGAATATA+CGG	0.346486	8.1:-10682407	None:intergenic
TGGAGAATTTCTTAGTTTAA+GGG	0.357415	8.1:+10682598	MS.gene036662:CDS
CTAATGAAAGAGTTGAAATA+TGG	0.360862	8.1:+10682633	MS.gene036662:CDS
TATGCTTCTGATAACGTAGT+AGG	0.362895	8.1:+10682419	MS.gene036662:CDS
AACTACTAATTGTAATTTGT+GGG	0.393998	8.1:+10682571	MS.gene036662:CDS
TGGGACGGTCCACTTCCATT+TGG	0.399776	8.1:+10682842	MS.gene036662:CDS
GAGTCTTTGCTTTCACTCCC+TGG	0.417958	8.1:+10682887	MS.gene036662:CDS
CAACTACTAATTGTAATTTG+TGG	0.431415	8.1:+10682570	MS.gene036662:CDS
TTATGGAGCTATTCATTGGT+TGG	0.431689	8.1:+10682451	MS.gene036662:CDS
TAGTTTAAGGGCCAACGATT+GGG	0.435448	8.1:+10682610	MS.gene036662:CDS
TTTCATTGAGAGATAATACT+TGG	0.452810	8.1:+10682360	MS.gene036662:CDS
TAATGGGCTATCCGTGTTTG+AGG	0.456060	8.1:+10682333	None:intergenic
AATTACAATTAGTAGTTGAA+TGG	0.460653	8.1:-10682565	None:intergenic
ACTCTGTATACACGGTCACT+TGG	0.479905	8.1:-10682868	None:intergenic
GGAGTCGAAATGCCATCAAT+AGG	0.481597	8.1:-10682707	None:intergenic
TTAGTTTAAGGGCCAACGAT+TGG	0.487546	8.1:+10682609	MS.gene036662:CDS
TCTAGAGCATGTATCATTCT+GGG	0.499103	8.1:+10682823	MS.gene036662:CDS
GTTGAATGGTGAAAACCATC+AGG	0.508102	8.1:-10682551	None:intergenic
TGGTGAAAACCATCAGGAAA+AGG	0.509773	8.1:-10682545	None:intergenic
AATACAAAGTGCATTCGTCT+TGG	0.518219	8.1:+10682666	MS.gene036662:CDS
TAGGCTTGCACATTGTCACC+AGG	0.522054	8.1:-10682905	None:intergenic
ACGGTCACTTGGGATCCAAA+TGG	0.522598	8.1:-10682857	None:intergenic
AGAGCATATTGGGTAAAAGG+AGG	0.523892	8.1:-10682729	None:intergenic
TTGTTCGTGGTGATATAAAG+AGG	0.527772	8.1:+10682474	MS.gene036662:CDS
ATTCATTGGTTGGTTGTTCG+TGG	0.535905	8.1:+10682461	MS.gene036662:CDS
TAATGAAAGAGTTGAAATAT+GGG	0.539316	8.1:+10682634	MS.gene036662:CDS
ACTTGGGATCCAAATGGAAG+TGG	0.547144	8.1:-10682851	None:intergenic
CTCTGTATACACGGTCACTT+GGG	0.553016	8.1:-10682867	None:intergenic
CAGAAGCATAGAGAATATAC+GGG	0.554093	8.1:-10682406	None:intergenic
ATGCTTCTGATAACGTAGTA+GGG	0.561315	8.1:+10682420	MS.gene036662:CDS
TTGCATTTGATTTAATGGAT+CGG	0.568157	8.1:+10682507	MS.gene036662:CDS
GAGCATATTGGGTAAAAGGA+GGG	0.572126	8.1:-10682728	None:intergenic
TCTTTCATTAGCCCAATCGT+TGG	0.591565	8.1:-10682621	None:intergenic
TAGAGAATATACGGGGAGTG+AGG	0.603876	8.1:-10682398	None:intergenic
TAATACTTGGAAAGAACTTG+AGG	0.607517	8.1:+10682373	MS.gene036662:CDS
GGTGACATTGTTGGAACAGA+CGG	0.643436	8.1:+10682761	MS.gene036662:CDS
AGGCTTGCACATTGTCACCA+GGG	0.664941	8.1:-10682904	None:intergenic
GAGCATGTATCATTCTGGGA+CGG	0.678978	8.1:+10682827	MS.gene036662:CDS
AAGCAAAGACTCTGTATACA+CGG	0.681751	8.1:-10682876	None:intergenic
TTACTGAAGTATAATGACAG+AGG	0.710690	8.1:+10682794	MS.gene036662:CDS
AGAAGCATAGAGAATATACG+GGG	0.776084	8.1:-10682405	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATAATTGCATTTGATTTAA+TGG	+	chr8.1:10682502-10682521	MS.gene036662:CDS	15.0%
!!	AATTACAATTAGTAGTTGAA+TGG	-	chr8.1:10682568-10682587	None:intergenic	20.0%
!!	TAATGAAAGAGTTGAAATAT+GGG	+	chr8.1:10682634-10682653	MS.gene036662:CDS	20.0%
!!!	AACTACTAATTGTAATTTGT+GGG	+	chr8.1:10682571-10682590	MS.gene036662:CDS	20.0%
!	AATGAAAAAAACCTCAAACA+CGG	-	chr8.1:10682347-10682366	None:intergenic	25.0%
!	CAACTACTAATTGTAATTTG+TGG	+	chr8.1:10682570-10682589	MS.gene036662:CDS	25.0%
!	CTAATGAAAGAGTTGAAATA+TGG	+	chr8.1:10682633-10682652	MS.gene036662:CDS	25.0%
!	TGGAGAATTTCTTAGTTTAA+GGG	+	chr8.1:10682598-10682617	MS.gene036662:CDS	25.0%
!	TGTCATTATACTTCAGTAAT+TGG	-	chr8.1:10682793-10682812	None:intergenic	25.0%
!	TTGGAGAATTTCTTAGTTTA+AGG	+	chr8.1:10682597-10682616	MS.gene036662:CDS	25.0%
!	TTTCATTGAGAGATAATACT+TGG	+	chr8.1:10682360-10682379	MS.gene036662:CDS	25.0%
!!	AATTGTAATTTGTGGGTATT+TGG	+	chr8.1:10682578-10682597	MS.gene036662:CDS	25.0%
!!	TTGCATTTGATTTAATGGAT+CGG	+	chr8.1:10682507-10682526	MS.gene036662:CDS	25.0%
!!!	CATTTTTTGTAGAGCATATT+GGG	-	chr8.1:10682742-10682761	None:intergenic	25.0%
	ACAAAAAATGGTGACATTGT+TGG	+	chr8.1:10682752-10682771	MS.gene036662:CDS	30.0%
	CCAATATGCTCTACAAAAAA+TGG	+	chr8.1:10682740-10682759	MS.gene036662:CDS	30.0%
	TAATACTTGGAAAGAACTTG+AGG	+	chr8.1:10682373-10682392	MS.gene036662:CDS	30.0%
	TTACTGAAGTATAATGACAG+AGG	+	chr8.1:10682794-10682813	MS.gene036662:CDS	30.0%
!	TCAGAAGCATAGAGAATATA+CGG	-	chr8.1:10682410-10682429	None:intergenic	30.0%
!	TCTTTTATGGAGCTATTCAT+TGG	+	chr8.1:10682447-10682466	MS.gene036662:CDS	30.0%
!!!	CCATTTTTTGTAGAGCATAT+TGG	-	chr8.1:10682743-10682762	None:intergenic	30.0%
	AAGCAAAGACTCTGTATACA+CGG	-	chr8.1:10682879-10682898	None:intergenic	35.0%
	AATACAAAGTGCATTCGTCT+TGG	+	chr8.1:10682666-10682685	MS.gene036662:CDS	35.0%
	ACTCTTGTTCTTCCTATTGA+TGG	+	chr8.1:10682695-10682714	MS.gene036662:CDS	35.0%
	TGTAGAGCATATTGGGTAAA+AGG	-	chr8.1:10682735-10682754	None:intergenic	35.0%
	TTATGGAGCTATTCATTGGT+TGG	+	chr8.1:10682451-10682470	MS.gene036662:CDS	35.0%
	TTGTTCGTGGTGATATAAAG+AGG	+	chr8.1:10682474-10682493	MS.gene036662:CDS	35.0%
!	AGAAGCATAGAGAATATACG+GGG	-	chr8.1:10682408-10682427	None:intergenic	35.0%
!	ATGCTTCTGATAACGTAGTA+GGG	+	chr8.1:10682420-10682439	MS.gene036662:CDS	35.0%
!	CAGAAGCATAGAGAATATAC+GGG	-	chr8.1:10682409-10682428	None:intergenic	35.0%
!	TATGCTTCTGATAACGTAGT+AGG	+	chr8.1:10682419-10682438	MS.gene036662:CDS	35.0%
!	TCTAGAGCATGTATCATTCT+GGG	+	chr8.1:10682823-10682842	MS.gene036662:CDS	35.0%
!!	TTCTAGAGCATGTATCATTC+TGG	+	chr8.1:10682822-10682841	MS.gene036662:CDS	35.0%
	AGAGCATATTGGGTAAAAGG+AGG	-	chr8.1:10682732-10682751	None:intergenic	40.0%
	GAGCATATTGGGTAAAAGGA+GGG	-	chr8.1:10682731-10682750	None:intergenic	40.0%
	GTTGAATGGTGAAAACCATC+AGG	-	chr8.1:10682554-10682573	None:intergenic	40.0%
	TAGTTTAAGGGCCAACGATT+GGG	+	chr8.1:10682610-10682629	MS.gene036662:CDS	40.0%
	TCTTTCATTAGCCCAATCGT+TGG	-	chr8.1:10682624-10682643	None:intergenic	40.0%
	TGGTGAAAACCATCAGGAAA+AGG	-	chr8.1:10682548-10682567	None:intergenic	40.0%
	TTAGTTTAAGGGCCAACGAT+TGG	+	chr8.1:10682609-10682628	MS.gene036662:CDS	40.0%
!	ATTCATTGGTTGGTTGTTCG+TGG	+	chr8.1:10682461-10682480	MS.gene036662:CDS	40.0%
!	GTAGTAGGGTCACTCTTTTA+TGG	+	chr8.1:10682434-10682453	MS.gene036662:CDS	40.0%
!	TTAGAGATGCCTTTTCCTGA+TGG	+	chr8.1:10682536-10682555	MS.gene036662:CDS	40.0%
	ACTCTGTATACACGGTCACT+TGG	-	chr8.1:10682871-10682890	None:intergenic	45.0%
	ACTTGGGATCCAAATGGAAG+TGG	-	chr8.1:10682854-10682873	None:intergenic	45.0%
	CTCTGTATACACGGTCACTT+GGG	-	chr8.1:10682870-10682889	None:intergenic	45.0%
	GGAGTCGAAATGCCATCAAT+AGG	-	chr8.1:10682710-10682729	None:intergenic	45.0%
	GGTGACATTGTTGGAACAGA+CGG	+	chr8.1:10682761-10682780	MS.gene036662:CDS	45.0%
	TAGAGAATATACGGGGAGTG+AGG	-	chr8.1:10682401-10682420	None:intergenic	45.0%
!	GAGCATGTATCATTCTGGGA+CGG	+	chr8.1:10682827-10682846	MS.gene036662:CDS	45.0%
	ACGGTCACTTGGGATCCAAA+TGG	-	chr8.1:10682860-10682879	None:intergenic	50.0%
	AGGCTTGCACATTGTCACCA+GGG	-	chr8.1:10682907-10682926	None:intergenic	50.0%
	GAGTCTTTGCTTTCACTCCC+TGG	+	chr8.1:10682887-10682906	MS.gene036662:CDS	50.0%
	TAGGCTTGCACATTGTCACC+AGG	-	chr8.1:10682908-10682927	None:intergenic	50.0%
	TGGGACGGTCCACTTCCATT+TGG	+	chr8.1:10682842-10682861	MS.gene036662:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	10682335	10682928	10682335	ID=MS.gene036662
chr8.1	mRNA	10682335	10682928	10682335	ID=MS.gene036662.t1;Parent=MS.gene036662
chr8.1	exon	10682335	10682928	10682335	ID=MS.gene036662.t1.exon1;Parent=MS.gene036662.t1
chr8.1	CDS	10682335	10682928	10682335	ID=cds.MS.gene036662.t1;Parent=MS.gene036662.t1

Gene Sequence

>MS.gene036662

ATGGGCTATCCGTGTTTGAGGTTTTTTTCATTGAGAGATAATACTTGGAAAGAACTTGAGGCTCCTCACTCCCCGTATATTCTCTATGCTTCTGATAACGTAGTAGGGTCACTCTTTTATGGAGCTATTCATTGGTTGGTTGTTCGTGGTGATATAAAGAGGCAAGTTATAATTGCATTTGATTTAATGGATCGGAAGCTTTTAGAGATGCCTTTTCCTGATGGTTTTCACCATTCAACTACTAATTGTAATTTGTGGGTATTTGGAGAATTTCTTAGTTTAAGGGCCAACGATTGGGCTAATGAAAGAGTTGAAATATGGGTGATGAACGAATACAAAGTGCATTCGTCTTGGACTAAAACTCTTGTTCTTCCTATTGATGGCATTTCGACTCCCTCCTTTTACCCAATATGCTCTACAAAAAATGGTGACATTGTTGGAACAGACGGTGATATCCAATTACTGAAGTATAATGACAGAGGACAGCTTCTAGAGCATGTATCATTCTGGGACGGTCCACTTCCATTTGGATCCCAAGTGACCGTGTATACAGAGTCTTTGCTTTCACTCCCTGGTGACAATGTGCAAGCCTAA

Protein sequence

>MS.gene036662.t1

MGYPCLRFFSLRDNTWKELEAPHSPYILYASDNVVGSLFYGAIHWLVVRGDIKRQVIIAFDLMDRKLLEMPFPDGFHHSTTNCNLWVFGEFLSLRANDWANERVEIWVMNEYKVHSSWTKTLVLPIDGISTPSFYPICSTKNGDIVGTDGDIQLLKYNDRGQLLEHVSFWDGPLPFGSQVTVYTESLLSLPGDNVQA