AlfalfaGEDB | MS.gene060367

M. sativa cultivar XinJiangDaYe / MS.gene060367

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060367.t1	AES91738.2	95.7	141	6	0	1	141	216	356	7.90E-76	293.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060367.t1	G7JHV9	95.7	141	6	0	1	141	216	356	5.7e-76	293.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene44885	MS.gene060367	PPI
MS.gene011679	MS.gene060367	PPI
MS.gene060367	MS.gene035261	PPI
MS.gene060367	MS.gene87585	PPI
MS.gene060370	MS.gene060367	PPI
MS.gene060367	MS.gene023999	PPI
MS.gene066635	MS.gene060367	PPI
MS.gene060367	MS.gene036599	PPI
MS.gene57533	MS.gene060367	PPI
MS.gene87586	MS.gene060367	PPI
MS.gene060367	MS.gene036581	PPI
MS.gene060367	MS.gene035237	PPI
MS.gene060367	MS.gene000036	PPI
MS.gene40887	MS.gene060367	PPI
MS.gene50339	MS.gene060367	PPI
MS.gene060367	MS.gene50309	PPI
MS.gene060367	MS.gene50320	PPI
MS.gene060367	MS.gene87557	PPI
MS.gene060367	MS.gene51199	PPI
MS.gene060367	MS.gene035263	PPI
MS.gene060366	MS.gene060367	PPI
MS.gene060367	MS.gene036664	PPI
MS.gene060367	MS.gene053257	PPI
MS.gene060367	MS.gene77858	PPI
MS.gene060367	MS.gene51201	PPI
MS.gene060367	MS.gene009893	PPI
MS.gene57529	MS.gene060367	PPI
MS.gene060367	MS.gene50336	PPI
MS.gene060367	MS.gene77704	PPI
MS.gene40902	MS.gene060367	PPI
MS.gene060367	MS.gene50305	PPI
MS.gene021553	MS.gene060367	PPI
MS.gene033875	MS.gene060367	PPI
MS.gene060367	MS.gene68890	PPI
MS.gene036582	MS.gene060367	PPI
MS.gene27021	MS.gene060367	PPI
MS.gene066620	MS.gene060367	PPI
MS.gene035236	MS.gene060367	PPI
MS.gene060367	MS.gene036663	PPI
MS.gene060367	MS.gene68580	PPI
MS.gene060367	MS.gene40985	PPI
MS.gene060367	MS.gene57525	PPI
MS.gene58781	MS.gene060367	PPI
MS.gene060367	MS.gene63657	PPI
MS.gene011106	MS.gene060367	PPI
MS.gene060367	MS.gene059157	PPI
MS.gene62398	MS.gene060367	PPI
MS.gene060367	MS.gene023996	PPI
MS.gene060367	MS.gene030114	PPI
MS.gene60027	MS.gene060367	PPI
MS.gene44886	MS.gene060367	PPI
MS.gene060367	MS.gene045473	PPI
MS.gene038756	MS.gene060367	PPI
MS.gene060367	MS.gene50301	PPI
MS.gene88776	MS.gene060367	PPI
MS.gene060367	MS.gene88774	PPI
MS.gene35068	MS.gene060367	PPI
MS.gene041390	MS.gene060367	PPI
MS.gene060367	MS.gene031590	PPI
MS.gene92376	MS.gene060367	PPI
MS.gene000035	MS.gene060367	PPI
MS.gene50329	MS.gene060367	PPI
MS.gene060367	MS.gene40984	PPI
MS.gene060367	MS.gene066623	PPI
MS.gene31637	MS.gene060367	PPI
MS.gene87573	MS.gene060367	PPI
MS.gene060367	MS.gene064086	PPI
MS.gene060367	MS.gene064090	PPI
MS.gene57537	MS.gene060367	PPI
MS.gene060367	MS.gene24208	PPI
MS.gene060367	MS.gene58317	PPI
MS.gene019504	MS.gene060367	PPI
MS.gene059156	MS.gene060367	PPI
MS.gene060367	MS.gene90742	PPI
MS.gene060367	MS.gene24212	PPI
MS.gene060367	MS.gene50332	PPI
MS.gene060367	MS.gene024979	PPI
MS.gene58716	MS.gene060367	PPI
MS.gene033444	MS.gene060367	PPI
MS.gene019505	MS.gene060367	PPI
MS.gene50306	MS.gene060367	PPI
MS.gene58785	MS.gene060367	PPI
MS.gene060367	MS.gene24826	PPI
MS.gene060367	MS.gene063472	PPI
MS.gene060367	MS.gene43790	PPI
MS.gene060367	MS.gene034680	PPI
MS.gene066639	MS.gene060367	PPI
MS.gene26949	MS.gene060367	PPI
MS.gene060367	MS.gene044563	PPI
MS.gene036760	MS.gene060367	PPI
MS.gene060367	MS.gene50327	PPI
MS.gene060367	MS.gene066626	PPI
MS.gene060367	MS.gene40982	PPI
MS.gene58311	MS.gene060367	PPI
MS.gene57527	MS.gene060367	PPI
MS.gene033432	MS.gene060367	PPI
MS.gene060367	MS.gene88416	PPI
MS.gene060367	MS.gene57530	PPI
MS.gene033426	MS.gene060367	PPI
MS.gene59639	MS.gene060367	PPI
MS.gene060367	MS.gene003076	PPI
MS.gene060367	MS.gene024009	PPI
MS.gene060367	MS.gene40887	PPI
MS.gene060367	MS.gene009892	PPI
MS.gene010758	MS.gene060367	PPI
MS.gene060367	MS.gene006705	PPI
MS.gene063670	MS.gene060367	PPI
MS.gene060367	MS.gene061241	PPI
MS.gene060367	MS.gene51192	PPI
MS.gene060367	MS.gene51188	PPI
MS.gene019506	MS.gene060367	PPI
MS.gene50326	MS.gene060367	PPI
MS.gene060367	MS.gene033875	PPI
MS.gene51200	MS.gene060367	PPI
MS.gene060367	MS.gene38220	PPI
MS.gene060367	MS.gene40986	PPI
MS.gene060367	MS.gene041394	PPI
MS.gene024002	MS.gene060367	PPI
MS.gene060367	MS.gene034688	PPI
MS.gene060367	MS.gene03060	PPI
MS.gene88774	MS.gene060367	PPI
MS.gene060367	MS.gene033440	PPI
MS.gene060367	MS.gene024011	PPI
MS.gene060367	MS.gene58241	PPI
MS.gene060367	MS.gene064109	PPI
MS.gene034686	MS.gene060367	PPI
MS.gene060367	MS.gene058696	PPI
MS.gene40982	MS.gene060367	PPI
MS.gene42452	MS.gene060367	PPI
MS.gene060367	MS.gene035238	PPI
MS.gene060367	MS.gene85043	PPI
MS.gene063414	MS.gene060367	PPI
MS.gene060367	MS.gene064114	PPI
MS.gene060367	MS.gene062698	PPI
MS.gene060367	MS.gene80610	PPI
MS.gene87563	MS.gene060367	PPI
MS.gene57526	MS.gene060367	PPI
MS.gene060367	MS.gene033083	PPI
MS.gene051820	MS.gene060367	PPI
MS.gene26957	MS.gene060367	PPI
MS.gene97996	MS.gene060367	PPI
MS.gene060367	MS.gene40886	PPI
MS.gene58320	MS.gene060367	PPI
MS.gene81242	MS.gene060367	PPI
MS.gene26101	MS.gene060367	PPI
MS.gene27283	MS.gene060367	PPI
MS.gene64203	MS.gene060367	PPI
MS.gene060367	MS.gene041391	PPI
MS.gene060367	MS.gene033443	PPI
MS.gene42444	MS.gene060367	PPI
MS.gene51202	MS.gene060367	PPI
MS.gene87562	MS.gene060367	PPI
MS.gene40904	MS.gene060367	PPI
MS.gene060367	MS.gene045474	PPI
MS.gene060367	MS.gene058701	PPI
MS.gene060367	MS.gene036558	PPI
MS.gene060367	MS.gene87554	PPI
MS.gene060367	MS.gene009891	PPI
MS.gene060367	MS.gene27051	PPI
MS.gene87569	MS.gene060367	PPI
MS.gene064104	MS.gene060367	PPI
MS.gene060367	MS.gene064108	PPI
MS.gene060367	MS.gene048193	PPI
MS.gene041491	MS.gene060367	PPI
MS.gene060367	MS.gene016220	PPI
MS.gene060367	MS.gene024008	PPI
MS.gene060367	MS.gene50337	PPI
MS.gene059096	MS.gene060367	PPI
MS.gene57528	MS.gene060367	PPI
MS.gene50297	MS.gene060367	PPI
MS.gene006711	MS.gene060367	PPI
MS.gene27285	MS.gene060367	PPI
MS.gene064091	MS.gene060367	PPI
MS.gene064112	MS.gene060367	PPI
MS.gene060367	MS.gene58240	PPI
MS.gene045476	MS.gene060367	PPI
MS.gene24208	MS.gene060367	PPI
MS.gene060367	MS.gene27284	PPI
MS.gene50307	MS.gene060367	PPI
MS.gene034690	MS.gene060367	PPI
MS.gene060367	MS.gene57717	PPI
MS.gene060367	MS.gene48221	PPI
MS.gene96407	MS.gene060367	PPI
MS.gene77857	MS.gene060367	PPI
MS.gene51191	MS.gene060367	PPI
MS.gene060367	MS.gene063474	PPI
MS.gene060367	MS.gene51190	PPI
MS.gene060367	MS.gene58319	PPI
MS.gene060367	MS.gene044426	PPI
MS.gene060367	MS.gene034681	PPI
MS.gene033430	MS.gene060367	PPI
MS.gene060367	MS.gene57532	PPI
MS.gene50298	MS.gene060367	PPI
MS.gene67687	MS.gene060367	PPI
MS.gene060367	MS.gene033442	PPI
MS.gene036583	MS.gene060367	PPI
MS.gene060367	MS.gene44428	PPI
MS.gene060367	MS.gene058669	PPI
MS.gene060367	MS.gene066120	PPI
MS.gene71159	MS.gene060367	PPI
MS.gene96448	MS.gene060367	PPI
MS.gene060367	MS.gene035235	PPI
MS.gene058692	MS.gene060367	PPI
MS.gene041392	MS.gene060367	PPI
MS.gene060367	MS.gene041489	PPI
MS.gene69309	MS.gene060367	PPI
MS.gene63658	MS.gene060367	PPI
MS.gene033081	MS.gene060367	PPI
MS.gene060367	MS.gene024000	PPI
MS.gene060367	MS.gene012215	PPI
MS.gene060367	MS.gene24213	PPI
MS.gene031591	MS.gene060367	PPI
MS.gene060367	MS.gene033079	PPI
MS.gene060367	MS.gene034677	PPI
MS.gene060367	MS.gene055694	PPI
MS.gene060367	MS.gene059101	PPI
MS.gene070461	MS.gene060367	PPI
MS.gene51199	MS.gene060367	PPI
MS.gene060367	MS.gene58316	PPI
MS.gene060367	MS.gene033430	PPI
MS.gene060367	MS.gene87584	PPI
MS.gene060367	MS.gene58321	PPI
MS.gene060367	MS.gene87564	PPI
MS.gene87559	MS.gene060367	PPI
MS.gene060367	MS.gene58315	PPI
MS.gene060367	MS.gene90743	PPI
MS.gene041475	MS.gene060367	PPI
MS.gene033441	MS.gene060367	PPI
MS.gene060367	MS.gene85454	PPI
MS.gene060367	MS.gene064112	PPI
MS.gene060367	MS.gene036556	PPI
MS.gene060367	MS.gene57538	PPI
MS.gene063826	MS.gene060367	PPI
MS.gene060367	MS.gene058693	PPI
MS.gene060367	MS.gene27319	PPI
MS.gene44892	MS.gene060367	PPI
MS.gene060367	MS.gene57536	PPI
MS.gene060367	MS.gene51200	PPI
MS.gene57531	MS.gene060367	PPI
MS.gene064111	MS.gene060367	PPI
MS.gene060367	MS.gene064083	PPI
MS.gene26829	MS.gene060367	PPI
MS.gene39262	MS.gene060367	PPI
MS.gene053256	MS.gene060367	PPI
MS.gene060367	MS.gene58783	PPI
MS.gene75875	MS.gene060367	PPI
MS.gene060367	MS.gene024420	PPI
MS.gene058694	MS.gene060367	PPI
MS.gene060367	MS.gene40988	PPI
MS.gene54049	MS.gene060367	PPI
MS.gene43789	MS.gene060367	PPI
MS.gene060367	MS.gene54541	PPI
MS.gene060367	MS.gene39265	PPI
MS.gene060367	MS.gene036584	PPI
MS.gene060367	MS.gene036662	PPI
MS.gene060367	MS.gene060368	PPI
MS.gene060367	MS.gene053299	PPI
MS.gene006710	MS.gene060367	PPI
MS.gene060367	MS.gene28758	PPI
MS.gene060367	MS.gene044429	PPI
MS.gene072177	MS.gene060367	PPI
MS.gene58722	MS.gene060367	PPI
MS.gene060367	MS.gene42451	PPI
MS.gene64001	MS.gene060367	PPI
MS.gene43796	MS.gene060367	PPI
MS.gene060367	MS.gene69307	PPI
MS.gene58312	MS.gene060367	PPI
MS.gene36704	MS.gene060367	PPI
MS.gene032970	MS.gene060367	PPI
MS.gene060367	MS.gene019507	PPI
MS.gene060367	MS.gene033431	PPI
MS.gene77856	MS.gene060367	PPI
MS.gene58313	MS.gene060367	PPI
MS.gene060367	MS.gene034762	PPI
MS.gene060367	MS.gene59943	PPI
MS.gene066622	MS.gene060367	PPI
MS.gene060367	MS.gene58314	PPI
MS.gene44887	MS.gene060367	PPI
MS.gene63655	MS.gene060367	PPI
MS.gene44883	MS.gene060367	PPI
MS.gene060367	MS.gene67501	PPI
MS.gene060367	MS.gene96406	PPI
MS.gene060367	MS.gene27285	PPI
MS.gene060367	MS.gene035262	PPI
MS.gene88780	MS.gene060367	PPI
MS.gene41046	MS.gene060367	PPI
MS.gene060367	MS.gene028390	PPI
MS.gene87588	MS.gene060367	PPI
MS.gene017412	MS.gene060367	PPI
MS.gene060367	MS.gene40878	PPI
MS.gene060367	MS.gene96407	PPI
MS.gene80884	MS.gene060367	PPI
MS.gene51192	MS.gene060367	PPI
MS.gene009883	MS.gene060367	PPI
MS.gene060367	MS.gene058703	PPI
MS.gene044563	MS.gene060367	PPI
MS.gene069075	MS.gene060367	PPI
MS.gene060367	MS.gene047279	PPI
MS.gene060367	MS.gene060370	PPI
MS.gene033427	MS.gene060367	PPI
MS.gene060367	MS.gene024002	PPI
MS.gene060367	MS.gene032969	PPI
MS.gene40985	MS.gene060367	PPI
MS.gene041474	MS.gene060367	PPI
MS.gene060367	MS.gene50297	PPI
MS.gene27020	MS.gene060367	PPI
MS.gene060367	MS.gene42445	PPI
MS.gene060367	MS.gene86273	PPI
MS.gene060367	MS.gene26830	PPI
MS.gene060367	MS.gene22715	PPI
MS.gene041388	MS.gene060367	PPI
MS.gene060367	MS.gene038756	PPI
MS.gene062698	MS.gene060367	PPI
MS.gene57536	MS.gene060367	PPI
MS.gene96126	MS.gene060367	PPI
MS.gene019503	MS.gene060367	PPI
MS.gene060367	MS.gene51207	PPI
MS.gene51208	MS.gene060367	PPI
MS.gene016524	MS.gene060367	PPI
MS.gene50304	MS.gene060367	PPI
MS.gene060367	MS.gene36595	PPI
MS.gene060367	MS.gene024004	PPI
MS.gene045475	MS.gene060367	PPI
MS.gene060367	MS.gene045140	PPI
MS.gene060367	MS.gene070462	PPI
MS.gene060367	MS.gene061240	PPI
MS.gene90744	MS.gene060367	PPI
MS.gene51204	MS.gene060367	PPI
MS.gene31587	MS.gene060367	PPI
MS.gene036557	MS.gene060367	PPI
MS.gene060367	MS.gene041473	PPI
MS.gene041393	MS.gene060367	PPI
MS.gene060367	MS.gene50311	PPI
MS.gene060367	MS.gene035234	PPI
MS.gene060367	MS.gene058989	PPI
MS.gene060367	MS.gene041468	PPI
MS.gene84698	MS.gene060367	PPI
MS.gene060367	MS.gene041395	PPI
MS.gene060367	MS.gene066639	PPI
MS.gene060367	MS.gene42447	PPI
MS.gene58239	MS.gene060367	PPI
MS.gene060367	MS.gene51189	PPI
MS.gene066641	MS.gene060367	PPI
MS.gene82082	MS.gene060367	PPI
MS.gene000038	MS.gene060367	PPI
MS.gene060367	MS.gene046958	PPI
MS.gene060367	MS.gene24286	PPI
MS.gene060367	MS.gene044425	PPI
MS.gene57535	MS.gene060367	PPI
MS.gene025887	MS.gene060367	PPI
MS.gene041470	MS.gene060367	PPI
MS.gene87200	MS.gene060367	PPI
MS.gene060367	MS.gene59637	PPI
MS.gene060367	MS.gene24173	PPI
MS.gene060367	MS.gene27022	PPI
MS.gene015089	MS.gene060367	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060367.t1	MTR_4g118380	95.745	141	6	0	1	141	216	356	1.52e-97	286
MS.gene060367.t1	MTR_4g118400	76.687	163	17	1	1	163	153	294	8.52e-83	246
MS.gene060367.t1	MTR_6g060650	75.460	163	31	1	1	163	214	367	3.17e-82	247
MS.gene060367.t1	MTR_4g117720	69.643	168	36	3	2	163	213	371	4.66e-72	221
MS.gene060367.t1	MTR_3g103020	63.415	164	49	2	2	163	218	372	1.64e-64	202
MS.gene060367.t1	MTR_4g109280	64.198	162	46	3	3	162	201	352	5.59e-64	200
MS.gene060367.t1	MTR_3g034180	61.728	162	52	2	2	163	332	483	2.03e-61	197
MS.gene060367.t1	MTR_3g034130	61.039	154	51	1	2	155	218	362	1.46e-59	189
MS.gene060367.t1	MTR_4g117850	61.078	167	50	4	2	162	216	373	4.79e-59	188
MS.gene060367.t1	MTR_4g109270	60.123	163	54	2	3	163	205	358	2.86e-58	186
MS.gene060367.t1	MTR_4g116320	60.241	166	51	5	2	163	98	252	8.32e-57	179
MS.gene060367.t1	MTR_4g122850	60.000	165	53	5	2	163	204	358	1.71e-55	179
MS.gene060367.t1	MTR_3g034160	61.111	162	53	2	2	163	218	369	2.74e-55	178
MS.gene060367.t1	MTR_1g055195	56.442	163	62	3	1	163	319	472	1.64e-54	179
MS.gene060367.t1	MTR_8g040935	57.143	168	57	4	2	163	44	202	2.57e-54	171
MS.gene060367.t1	MTR_1g055175	56.627	166	58	5	1	163	41	195	8.10e-54	169
MS.gene060367.t1	MTR_1g055165	56.627	166	58	5	1	163	158	312	2.52e-52	169
MS.gene060367.t1	MTR_4g116330	53.892	167	64	3	1	163	217	374	4.28e-52	170
MS.gene060367.t1	MTR_4g094365	54.545	165	63	4	2	163	203	358	6.24e-52	169
MS.gene060367.t1	MTR_5g097210	56.707	164	59	3	2	164	206	358	6.53e-50	164
MS.gene060367.t1	MTR_1g055135	56.364	165	63	4	1	163	212	369	1.15e-49	164
MS.gene060367.t1	MTR_4g023130	54.938	162	59	3	3	162	157	306	2.73e-48	159
MS.gene060367.t1	MTR_4g023090	51.136	176	61	4	3	163	213	378	4.56e-48	160
MS.gene060367.t1	MTR_4g023080	54.321	162	60	4	3	162	198	347	2.11e-47	157
MS.gene060367.t1	MTR_4g117770	53.049	164	69	2	2	163	204	361	6.25e-47	156
MS.gene060367.t1	MTR_4g117810	53.049	164	69	2	2	163	204	361	6.25e-47	156
MS.gene060367.t1	MTR_8g433030	56.886	167	52	8	3	163	184	336	1.03e-46	155
MS.gene060367.t1	MTR_4g117780	52.439	164	70	2	2	163	204	361	1.76e-46	155
MS.gene060367.t1	MTR_8g032390	56.886	167	52	8	3	163	217	369	2.38e-46	155
MS.gene060367.t1	MTR_4g023380	47.283	184	64	3	3	163	198	371	1.21e-45	153
MS.gene060367.t1	MTR_4g117750	54.268	164	71	2	1	164	195	354	2.32e-45	155
MS.gene060367.t1	MTR_4g117750	55.039	129	55	2	37	163	350	477	3.39e-36	130
MS.gene060367.t1	MTR_5g070080	54.268	164	63	3	2	163	226	379	3.49e-45	152
MS.gene060367.t1	MTR_1g055250	52.121	165	61	7	1	162	111	260	6.00e-45	150
MS.gene060367.t1	MTR_4g118370	49.390	164	55	3	1	164	120	255	1.44e-44	147
MS.gene060367.t1	MTR_4g021785	50.000	162	67	3	3	162	199	348	5.57e-43	146
MS.gene060367.t1	MTR_4g023190	53.614	166	62	7	3	163	198	353	5.69e-43	146
MS.gene060367.t1	MTR_4g118360	65.766	111	34	2	55	163	12	120	2.41e-42	137
MS.gene060367.t1	MTR_5g070130	50.311	161	68	3	6	163	219	370	2.97e-42	145
MS.gene060367.t1	MTR_4g023150	53.012	166	63	7	3	163	199	354	3.52e-42	144
MS.gene060367.t1	MTR_4g117870	61.789	123	45	2	42	163	140	261	2.02e-41	139
MS.gene060367.t1	MTR_5g070088	49.398	166	72	3	1	163	223	379	3.67e-41	142
MS.gene060367.t1	MTR_4g023070	47.701	174	67	4	3	162	200	363	3.72e-41	141
MS.gene060367.t1	MTR_4g023200	51.205	166	66	7	3	163	199	354	2.92e-40	139
MS.gene060367.t1	MTR_4g023120	47.429	175	66	5	3	162	200	363	4.43e-40	139
MS.gene060367.t1	MTR_6g463430	50.610	164	64	5	3	163	47	196	2.49e-39	132
MS.gene060367.t1	MTR_8g102520	45.455	165	76	5	2	163	163	316	1.01e-38	134
MS.gene060367.t1	MTR_8g433040	57.639	144	45	5	23	163	228	358	2.20e-37	131
MS.gene060367.t1	MTR_8g032380	57.639	144	45	5	23	163	228	358	2.20e-37	131
MS.gene060367.t1	MTR_7g079400	43.114	167	81	3	2	163	174	331	2.77e-36	128
MS.gene060367.t1	MTR_4g117530	42.945	163	53	2	1	163	125	247	8.29e-34	119
MS.gene060367.t1	MTR_5g023000	64.045	89	32	0	75	163	5	93	3.89e-33	113
MS.gene060367.t1	MTR_7g079370	45.399	163	78	3	2	163	198	350	9.50e-33	119
MS.gene060367.t1	MTR_4g023440	42.236	161	47	2	3	163	212	326	3.36e-31	114
MS.gene060367.t1	MTR_8g098830	44.604	139	67	3	2	140	68	196	3.64e-31	112
MS.gene060367.t1	MTR_7g079450	47.222	144	62	4	21	163	1	131	6.38e-31	108
MS.gene060367.t1	MTR_7g079420	42.262	168	78	7	2	163	984	1138	1.00e-30	117
MS.gene060367.t1	MTR_4g116330	40.719	167	47	3	1	163	217	335	4.10e-28	107
MS.gene060367.t1	MTR_4g122860	50.000	124	49	5	48	163	196	314	5.03e-28	106
MS.gene060367.t1	MTR_2g048580	40.237	169	71	8	2	163	191	336	1.22e-25	100
MS.gene060367.t1	MTR_4g114700	54.444	90	37	2	77	162	132	221	6.53e-23	91.3
MS.gene060367.t1	MTR_4g121580	40.881	159	53	6	3	159	220	339	7.33e-23	93.6
MS.gene060367.t1	MTR_7g117720	52.475	101	43	3	69	164	172	272	1.35e-21	88.6
MS.gene060367.t1	MTR_8g013010	56.522	69	17	1	2	70	254	309	1.89e-15	72.4
MS.gene060367.t1	MTR_4g117430	52.941	68	23	1	2	69	93	151	1.85e-14	67.0
MS.gene060367.t1	MTR_4g122840	35.507	138	44	4	28	163	164	258	1.06e-13	67.0
MS.gene060367.t1	MTR_8g013005	60.377	53	21	0	111	163	1	53	1.53e-13	62.4
MS.gene060367.t1	MTR_4g023430	45.000	80	33	2	91	163	141	216	8.77e-13	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 33 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATTGTGATTTGTGGGTATT+TGG	0.250931	8.4:+12978686	MS.gene060367:CDS
ATGGTAGGGTCGCTCTTTAA+TGG	0.257647	8.4:+12978515	MS.gene060367:CDS
TGGTAGGGTCGCTCTTTAAT+GGG	0.296490	8.4:+12978516	MS.gene060367:CDS
AAGATGATGTAGTTGAAATA+TGG	0.308827	8.4:+12978735	MS.gene060367:CDS
GCAATTCTCTTTATAGTAGA+AGG	0.334159	8.4:-12978936	None:intergenic
TTGGTGAGTTTCTCAGTGTA+TGG	0.351491	8.4:+12978705	MS.gene060367:CDS
TCTTTAATGGGGCTATTCAC+TGG	0.398766	8.4:+12978528	MS.gene060367:CDS
TAATGGGGCTATTCACTGGT+TGG	0.454880	8.4:+12978532	MS.gene060367:CDS
ATTGGAACTGATGGTGAAGT+TGG	0.456865	8.4:+12978872	MS.gene060367:CDS
TTTCCTTTCAATTAAATCAA+AGG	0.478785	8.4:-12978591	None:intergenic
TTCTCTGATTATTCCATGGT+AGG	0.508178	8.4:+12978500	None:intergenic
TTGCCTTTGATTTAATTGAA+AGG	0.515684	8.4:+12978588	MS.gene060367:CDS
TCTCTGATTATTCCATGGTA+GGG	0.522842	8.4:+12978501	None:intergenic
AACCTACAGATTGTGATTTG+TGG	0.524422	8.4:+12978678	MS.gene060367:CDS
TTGGTGAAGTACGATGAAAA+AGG	0.527194	8.4:+12978896	MS.gene060367:CDS
TAACCTTGTTCGCTATCACC+GGG	0.528671	8.4:-12979002	None:intergenic
ACCTACAGATTGTGATTTGT+GGG	0.529972	8.4:+12978679	MS.gene060367:CDS
AGATGATGTAGTTGAAATAT+GGG	0.540044	8.4:+12978736	MS.gene060367:CDS
AACTGATGGTGAAGTTGGAT+TGG	0.547756	8.4:+12978877	MS.gene060367:CDS
AACCTTGTTCGCTATCACCG+GGG	0.569785	8.4:-12979001	None:intergenic
CTCTATATACATAGCCACTC+GGG	0.570801	8.4:-12978963	None:intergenic
AGTCTTTGCATTCACTCCCC+CGG	0.572586	8.4:+12978984	MS.gene060367:CDS
GGTGATATTATTGGAACTGA+TGG	0.578976	8.4:+12978863	MS.gene060367:CDS
ATTAAAGAGCGACCCTACCA+TGG	0.581861	8.4:-12978513	None:intergenic
AGTACAAAGTGCATTCGTCA+TGG	0.583815	8.4:+12978768	MS.gene060367:CDS
ACTCTATATACATAGCCACT+CGG	0.604656	8.4:-12978964	None:intergenic
ATTGGAGAGAAGTAATGAGT+GGG	0.619618	8.4:-12978824	None:intergenic
ACCTTGTTCGCTATCACCGG+GGG	0.621298	8.4:-12979000	None:intergenic
TATTGGAGAGAAGTAATGAG+TGG	0.628700	8.4:-12978825	None:intergenic
GGTAGGGTCGCTCTTTAATG+GGG	0.635448	8.4:+12978517	MS.gene060367:CDS
GGTTCATGTTCAAAATCACC+TGG	0.645701	8.4:-12978659	None:intergenic
ACCCACAAATCACAATCTGT+AGG	0.659019	8.4:-12978680	None:intergenic
AGAGAATTGCACATCCCGAG+TGG	0.707706	8.4:+12978949	MS.gene060367:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTCCTTTCAATTAAATCAA+AGG	-	chr8.4:12978594-12978613	None:intergenic	20.0%
!	AAGATGATGTAGTTGAAATA+TGG	+	chr8.4:12978735-12978754	MS.gene060367:CDS	25.0%
!	ACAAAAAGTGGTGATATTAT+TGG	+	chr8.4:12978854-12978873	MS.gene060367:CDS	25.0%
!	AGATGATGTAGTTGAAATAT+GGG	+	chr8.4:12978736-12978755	MS.gene060367:CDS	25.0%
!!	TTGCCTTTGATTTAATTGAA+AGG	+	chr8.4:12978588-12978607	MS.gene060367:CDS	25.0%
	CCAATATGTTGTACAAAAAG+TGG	+	chr8.4:12978842-12978861	MS.gene060367:CDS	30.0%
	GCAATTCTCTTTATAGTAGA+AGG	-	chr8.4:12978939-12978958	None:intergenic	30.0%
!!!	CCACTTTTTGTACAACATAT+TGG	-	chr8.4:12978845-12978864	None:intergenic	30.0%
	AACCTACAGATTGTGATTTG+TGG	+	chr8.4:12978678-12978697	MS.gene060367:CDS	35.0%
	ACTCTATATACATAGCCACT+CGG	-	chr8.4:12978967-12978986	None:intergenic	35.0%
	ATTGGAGAGAAGTAATGAGT+GGG	-	chr8.4:12978827-12978846	None:intergenic	35.0%
	GGTGATATTATTGGAACTGA+TGG	+	chr8.4:12978863-12978882	MS.gene060367:CDS	35.0%
	TATTGGAGAGAAGTAATGAG+TGG	-	chr8.4:12978828-12978847	None:intergenic	35.0%
	TTGGTGAAGTACGATGAAAA+AGG	+	chr8.4:12978896-12978915	MS.gene060367:CDS	35.0%
!	ACCTACAGATTGTGATTTGT+GGG	+	chr8.4:12978679-12978698	MS.gene060367:CDS	35.0%
!	GATTGTGATTTGTGGGTATT+TGG	+	chr8.4:12978686-12978705	MS.gene060367:CDS	35.0%
!!!	CTTTGCCAGATGATCTTTTT+TGG	+	chr8.4:12978627-12978646	MS.gene060367:CDS	35.0%
	ACCCACAAATCACAATCTGT+AGG	-	chr8.4:12978683-12978702	None:intergenic	40.0%
	AGTACAAAGTGCATTCGTCA+TGG	+	chr8.4:12978768-12978787	MS.gene060367:CDS	40.0%
	CCTCTCCAAAAAAGATCATC+TGG	-	chr8.4:12978635-12978654	None:intergenic	40.0%
	CTCTATATACATAGCCACTC+GGG	-	chr8.4:12978966-12978985	None:intergenic	40.0%
	GGTTCATGTTCAAAATCACC+TGG	-	chr8.4:12978662-12978681	None:intergenic	40.0%
	TCTTTAATGGGGCTATTCAC+TGG	+	chr8.4:12978528-12978547	MS.gene060367:CDS	40.0%
	TTGGTGAGTTTCTCAGTGTA+TGG	+	chr8.4:12978705-12978724	MS.gene060367:CDS	40.0%
!	AACTGATGGTGAAGTTGGAT+TGG	+	chr8.4:12978877-12978896	MS.gene060367:CDS	40.0%
!	ATTGGAACTGATGGTGAAGT+TGG	+	chr8.4:12978872-12978891	MS.gene060367:CDS	40.0%
!!!	CCAGATGATCTTTTTTGGAG+AGG	+	chr8.4:12978632-12978651	MS.gene060367:CDS	40.0%
	ATGGTAGGGTCGCTCTTTAA+TGG	+	chr8.4:12978515-12978534	MS.gene060367:CDS	45.0%
	TAATGGGGCTATTCACTGGT+TGG	+	chr8.4:12978532-12978551	MS.gene060367:CDS	45.0%
	TGGTAGGGTCGCTCTTTAAT+GGG	+	chr8.4:12978516-12978535	MS.gene060367:CDS	45.0%
!!!	CTTTTTTGGAGAGGTTTGCC+AGG	+	chr8.4:12978641-12978660	MS.gene060367:CDS	45.0%
	AGAGAATTGCACATCCCGAG+TGG	+	chr8.4:12978949-12978968	MS.gene060367:CDS	50.0%
	AGTCTTTGCATTCACTCCCC+CGG	+	chr8.4:12978984-12979003	MS.gene060367:CDS	50.0%
	GGTAGGGTCGCTCTTTAATG+GGG	+	chr8.4:12978517-12978536	MS.gene060367:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	12978515	12979009	12978515	ID=MS.gene060367
chr8.4	mRNA	12978515	12979009	12978515	ID=MS.gene060367.t1;Parent=MS.gene060367
chr8.4	exon	12978515	12979009	12978515	ID=MS.gene060367.t1.exon1;Parent=MS.gene060367.t1
chr8.4	CDS	12978515	12979009	12978515	ID=cds.MS.gene060367.t1;Parent=MS.gene060367.t1

Gene Sequence

>MS.gene060367

ATGGTAGGGTCGCTCTTTAATGGGGCTATTCACTGGTTGGCTTTTCATCTTGATTTATCAATGAATGTTATTGTTGCCTTTGATTTAATTGAAAGGAAACTTTTAGACATATCTTTGCCAGATGATCTTTTTTGGAGAGGTTTGCCAGGTGATTTTGAACATGAACCTACAGATTGTGATTTGTGGGTATTTGGTGAGTTTCTCAGTGTATGGACTAAGCAAGATGATGTAGTTGAAATATGGGTGATGAAAGAGTACAAAGTGCATTCGTCATGGACTAAGACTCTTGTTTTTTCTATTGATGTCATTCCCACTCATTACTTCTCTCCAATATGTTGTACAAAAAGTGGTGATATTATTGGAACTGATGGTGAAGTTGGATTGGTGAAGTACGATGAAAAAGGACAGTTTCTAGAGTATACCTTCTACTATAAAGAGAATTGCACATCCCGAGTGGCTATGTATATAGAGTCTTTGCATTCACTCCCCCGGTGA

Protein sequence

>MS.gene060367.t1

MVGSLFNGAIHWLAFHLDLSMNVIVAFDLIERKLLDISLPDDLFWRGLPGDFEHEPTDCDLWVFGEFLSVWTKQDDVVEIWVMKEYKVHSSWTKTLVFSIDVIPTHYFSPICCTKSGDIIGTDGEVGLVKYDEKGQFLEYTFYYKENCTSRVAMYIESLHSLPR