AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40902


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40902.t1 MTR_1g055135 84.906 371 52 1 2 368 5 375 0.0 629
MS.gene40902.t1 MTR_1g055165 61.351 370 89 4 1 368 1 318 4.53e-151 429
MS.gene40902.t1 MTR_5g097210 57.221 367 146 9 1 364 1 359 2.95e-133 385
MS.gene40902.t1 MTR_4g117750 57.221 367 139 6 9 367 2 358 6.09e-122 361
MS.gene40902.t1 MTR_4g117750 47.368 133 58 4 245 366 350 481 1.22e-25 108
MS.gene40902.t1 MTR_3g103020 54.223 367 154 8 9 368 19 378 6.47e-121 354
MS.gene40902.t1 MTR_3g034180 50.667 375 161 10 9 367 122 488 9.37e-113 337
MS.gene40902.t1 MTR_4g117850 52.762 362 154 11 8 361 21 373 9.30e-109 323
MS.gene40902.t1 MTR_1g055195 59.532 299 102 7 76 368 193 478 2.35e-108 326
MS.gene40902.t1 MTR_5g070130 50.000 372 170 9 9 368 10 377 4.47e-108 322
MS.gene40902.t1 MTR_4g109280 54.247 365 150 13 9 368 7 359 5.26e-108 321
MS.gene40902.t1 MTR_3g034130 50.992 353 155 8 3 341 2 350 9.13e-108 320
MS.gene40902.t1 MTR_5g070080 49.091 385 164 9 9 368 9 386 3.80e-106 317
MS.gene40902.t1 MTR_3g034160 49.471 378 173 8 3 367 2 374 1.87e-104 312
MS.gene40902.t1 MTR_4g109270 51.892 370 154 14 10 368 8 364 6.35e-104 310
MS.gene40902.t1 MTR_4g122850 49.441 358 164 10 21 367 12 363 4.06e-102 306
MS.gene40902.t1 MTR_4g023090 46.667 390 160 12 8 367 14 385 1.89e-101 305
MS.gene40902.t1 MTR_4g116330 48.413 378 170 11 3 368 16 380 1.79e-100 302
MS.gene40902.t1 MTR_5g070088 48.303 383 162 9 9 363 6 380 3.64e-100 301
MS.gene40902.t1 MTR_4g117770 48.257 373 169 10 6 367 7 366 9.98e-100 300
MS.gene40902.t1 MTR_4g117810 48.257 373 169 10 6 367 7 366 9.98e-100 300
MS.gene40902.t1 MTR_4g117780 47.312 372 174 9 6 367 7 366 5.60e-99 298
MS.gene40902.t1 MTR_6g060650 50.400 375 161 11 9 367 7 372 3.26e-98 296
MS.gene40902.t1 MTR_4g023070 47.619 378 167 11 10 367 3 369 3.30e-98 296
MS.gene40902.t1 MTR_4g023080 48.780 369 156 10 9 367 8 353 1.41e-97 294
MS.gene40902.t1 MTR_4g021785 49.041 365 164 10 9 368 8 355 2.58e-96 291
MS.gene40902.t1 MTR_1g055175 72.539 193 52 1 177 368 9 201 3.49e-96 285
MS.gene40902.t1 MTR_4g094365 47.185 373 167 11 9 367 7 363 5.24e-94 285
MS.gene40902.t1 MTR_4g023120 46.174 379 173 11 10 368 3 370 8.98e-93 282
MS.gene40902.t1 MTR_4g117720 46.649 373 142 12 9 368 50 378 6.22e-92 280
MS.gene40902.t1 MTR_4g023380 43.970 398 152 11 8 367 14 378 4.66e-90 276
MS.gene40902.t1 MTR_4g118370 58.776 245 81 4 121 365 33 257 1.38e-89 270
MS.gene40902.t1 MTR_8g433040 44.882 381 172 11 1 368 9 364 1.78e-88 271
MS.gene40902.t1 MTR_8g032380 44.882 381 172 11 1 368 9 364 1.78e-88 271
MS.gene40902.t1 MTR_4g118380 48.324 358 150 11 8 338 6 355 6.90e-88 269
MS.gene40902.t1 MTR_4g023190 46.214 383 163 13 1 366 1 357 4.09e-84 259
MS.gene40902.t1 MTR_4g023150 45.714 385 163 14 1 366 1 358 6.85e-83 256
MS.gene40902.t1 MTR_4g023200 46.218 357 156 14 24 366 24 358 2.85e-82 255
MS.gene40902.t1 MTR_1g055250 66.667 201 63 3 146 345 49 246 6.31e-82 253
MS.gene40902.t1 MTR_4g023440 43.243 370 146 11 8 367 16 331 6.68e-79 245
MS.gene40902.t1 MTR_4g116330 43.386 378 150 12 3 368 16 341 9.75e-78 243
MS.gene40902.t1 MTR_8g032390 43.200 375 166 12 1 363 31 370 5.66e-76 239
MS.gene40902.t1 MTR_4g023130 41.848 368 142 9 9 367 8 312 8.94e-73 229
MS.gene40902.t1 MTR_8g013010 48.689 267 121 6 9 269 53 309 2.53e-72 228
MS.gene40902.t1 MTR_8g433030 41.351 370 147 12 1 363 31 337 3.21e-65 210
MS.gene40902.t1 MTR_4g121580 40.751 373 169 15 2 358 3 339 3.44e-65 212
MS.gene40902.t1 MTR_4g117870 40.523 306 136 8 67 367 2 266 3.71e-63 202
MS.gene40902.t1 MTR_7g079400 41.877 277 144 7 103 368 67 337 1.16e-59 196
MS.gene40902.t1 MTR_2g048580 35.870 368 196 17 9 368 7 342 1.21e-58 193
MS.gene40902.t1 MTR_7g079370 40.058 342 182 9 39 363 16 351 1.19e-57 191
MS.gene40902.t1 MTR_8g102520 35.695 367 178 10 9 368 7 322 1.96e-51 174
MS.gene40902.t1 MTR_4g118400 40.293 273 127 9 94 362 54 294 2.11e-50 171
MS.gene40902.t1 MTR_4g116320 47.085 223 100 4 151 365 43 255 2.49e-50 169
MS.gene40902.t1 MTR_4g116340 42.798 243 107 7 2 235 28 247 8.19e-44 152
MS.gene40902.t1 MTR_8g040935 44.660 206 99 7 172 368 9 208 9.39e-43 148
MS.gene40902.t1 MTR_7g079420 35.252 278 125 8 108 368 905 1144 8.81e-38 145
MS.gene40902.t1 MTR_2g021150 34.641 306 176 12 6 298 10 304 1.88e-37 139
MS.gene40902.t1 MTR_6g463430 42.381 210 106 7 164 368 3 202 1.94e-36 131
MS.gene40902.t1 MTR_1g055145 70.526 95 28 0 13 107 36 130 3.74e-36 133
MS.gene40902.t1 MTR_1g055145 61.446 83 31 1 203 285 121 202 3.89e-22 95.1
MS.gene40902.t1 MTR_4g061340 33.127 323 168 14 6 306 22 318 8.66e-36 134
MS.gene40902.t1 MTR_4g117530 41.485 229 85 9 143 368 71 253 9.02e-36 131
MS.gene40902.t1 MTR_4g114700 36.226 265 108 9 105 359 5 218 1.33e-34 127
MS.gene40902.t1 MTR_4g118360 51.181 127 58 3 245 368 1 126 1.81e-33 121
MS.gene40902.t1 MTR_2g021190 34.314 306 168 14 5 294 16 304 1.02e-32 126
MS.gene40902.t1 MTR_5g057790 33.224 304 169 12 10 298 46 330 4.84e-32 124
MS.gene40902.t1 MTR_4g055060 32.154 311 180 13 5 298 25 321 1.12e-31 123
MS.gene40902.t1 MTR_3g006670 32.209 326 179 13 3 310 42 343 1.41e-31 123
MS.gene40902.t1 MTR_3g014540 32.704 318 183 13 1 306 20 318 2.97e-31 122
MS.gene40902.t1 MTR_5g057710 32.566 304 171 12 10 298 46 330 1.18e-30 120
MS.gene40902.t1 MTR_7g117720 38.164 207 96 7 1 198 1 184 2.27e-30 117
MS.gene40902.t1 MTR_7g117720 52.874 87 36 3 282 363 186 272 1.04e-15 77.0
MS.gene40902.t1 MTR_3g014570 34.259 324 168 15 1 305 20 317 2.38e-30 119
MS.gene40902.t1 MTR_3g009240 32.051 312 173 12 8 306 34 319 6.48e-30 118
MS.gene40902.t1 MTR_1g094210 29.310 348 201 13 8 336 55 376 1.02e-29 118
MS.gene40902.t1 MTR_1g094210 29.032 372 217 14 8 360 55 398 1.67e-29 117
MS.gene40902.t1 MTR_4g133170 29.739 306 170 12 10 294 4 285 1.69e-29 117
MS.gene40902.t1 MTR_5g057020 32.203 295 159 12 10 293 46 310 1.81e-29 116
MS.gene40902.t1 MTR_1g068875 30.263 304 180 10 10 298 4 290 2.41e-29 117
MS.gene40902.t1 MTR_3g009310 32.899 307 162 13 8 294 40 322 2.74e-29 117
MS.gene40902.t1 MTR_3g007330 31.962 316 173 12 6 307 44 331 3.28e-29 117
MS.gene40902.t1 MTR_1g097330 33.553 304 169 13 8 298 14 297 5.04e-29 116
MS.gene40902.t1 MTR_5g022420 29.063 320 192 11 5 313 22 317 1.62e-28 114
MS.gene40902.t1 MTR_4g117430 42.331 163 79 4 109 269 3 152 1.93e-28 108
MS.gene40902.t1 MTR_7g407070 33.742 326 159 16 6 294 28 333 1.94e-28 114
MS.gene40902.t1 MTR_2g021155 34.098 305 176 13 5 298 31 321 2.57e-28 117
MS.gene40902.t1 MTR_4g109290 42.073 164 61 5 3 162 2 135 5.03e-28 108
MS.gene40902.t1 MTR_1g068835 30.263 304 181 9 10 298 4 291 1.74e-27 112
MS.gene40902.t1 MTR_3g007360 30.184 381 202 21 13 361 55 403 1.77e-27 112
MS.gene40902.t1 MTR_3g007430 33.333 300 161 15 13 294 46 324 2.06e-27 111
MS.gene40902.t1 MTR_3g007410 31.014 345 179 19 13 325 55 372 2.31e-27 112
MS.gene40902.t1 MTR_5g057690 30.565 301 171 12 10 298 46 320 4.43e-27 110
MS.gene40902.t1 MTR_2g021210 33.110 299 164 14 8 294 82 356 6.44e-27 110
MS.gene40902.t1 MTR_5g069120 42.222 180 87 6 20 185 1 177 2.09e-26 104
MS.gene40902.t1 MTR_2g046900 29.365 378 225 13 7 360 25 384 2.45e-26 108
MS.gene40902.t1 MTR_3g011100 30.841 321 179 15 6 306 231 528 3.26e-26 110
MS.gene40902.t1 MTR_3g013740 30.077 389 208 18 10 360 44 406 5.62e-26 108
MS.gene40902.t1 MTR_2g029990 31.457 302 170 14 11 294 52 334 6.45e-26 107
MS.gene40902.t1 MTR_3g036290 31.593 364 182 19 6 348 18 335 7.82e-26 107
MS.gene40902.t1 MTR_2g426090 29.805 359 195 14 13 336 9 345 1.03e-25 107
MS.gene40902.t1 MTR_6g065980 30.405 296 178 12 4 294 10 282 1.93e-25 105
MS.gene40902.t1 MTR_2g426020 27.543 403 226 14 7 365 3 383 2.42e-25 106
MS.gene40902.t1 MTR_6g021880 29.282 362 223 11 21 360 31 381 5.22e-25 105
MS.gene40902.t1 MTR_5g011200 30.400 375 194 17 6 349 13 351 5.38e-25 104
MS.gene40902.t1 MTR_2g028140 29.521 376 196 15 7 335 2 355 6.03e-25 105
MS.gene40902.t1 MTR_4g122860 35.897 195 86 7 181 367 156 319 7.07e-25 103
MS.gene40902.t1 MTR_4g122860 48.235 85 41 2 8 91 68 150 4.92e-11 63.9
MS.gene40902.t1 MTR_5g046260 29.640 361 181 16 8 360 2 297 9.73e-25 102
MS.gene40902.t1 MTR_1g055200 60.241 83 29 2 105 185 5 85 1.07e-24 97.4
MS.gene40902.t1 MTR_1g054725 30.868 311 173 14 6 294 16 306 1.30e-24 103
MS.gene40902.t1 MTR_3g010390 32.121 330 185 17 6 307 29 347 1.38e-24 103
MS.gene40902.t1 MTR_6g027910 31.234 381 211 16 13 360 12 374 1.46e-24 103
MS.gene40902.t1 MTR_1g097560 29.517 393 188 23 6 360 32 373 3.54e-24 102
MS.gene40902.t1 MTR_3g011060 33.038 339 156 21 5 306 23 327 5.25e-24 102
MS.gene40902.t1 MTR_3g007300 27.989 368 206 14 6 360 45 366 6.41e-24 101
MS.gene40902.t1 MTR_3g023930 28.716 296 169 13 8 294 32 294 7.92e-24 101
MS.gene40902.t1 MTR_3g007270 29.653 317 179 12 8 298 45 343 7.95e-24 102
MS.gene40902.t1 MTR_2g021252 30.928 291 168 12 13 294 50 316 9.51e-24 101
MS.gene40902.t1 MTR_8g467140 31.111 315 186 14 9 309 31 328 1.64e-23 100
MS.gene40902.t1 MTR_2g025420 27.246 334 187 10 7 298 3 322 1.83e-23 101
MS.gene40902.t1 MTR_5g023000 54.737 95 40 2 276 368 6 99 2.52e-23 93.2
MS.gene40902.t1 MTR_2g078900 29.508 305 175 13 6 294 29 309 3.50e-23 99.4
MS.gene40902.t1 MTR_7g079450 42.029 138 77 2 231 368 3 137 4.59e-23 94.0
MS.gene40902.t1 MTR_2g426060 29.129 333 186 11 7 304 3 320 5.16e-23 99.8
MS.gene40902.t1 MTR_3g072470 29.674 337 185 11 6 304 15 337 5.81e-23 99.8
MS.gene40902.t1 MTR_2g046830 29.582 311 186 12 7 303 22 313 6.34e-23 99.4
MS.gene40902.t1 MTR_3g030250 27.968 379 213 19 8 360 35 379 7.61e-23 99.0
MS.gene40902.t1 MTR_3g436150 33.544 316 167 17 6 294 28 327 8.56e-23 99.0
MS.gene40902.t1 MTR_7g077970 30.564 337 183 13 8 303 5 331 9.83e-23 99.0
MS.gene40902.t1 MTR_3g010430 30.097 309 174 13 6 294 32 318 1.03e-22 99.0
MS.gene40902.t1 MTR_8g062660 26.708 322 181 13 1 292 13 309 1.05e-22 100
MS.gene40902.t1 MTR_0044s0300 29.967 307 168 13 8 294 36 315 1.11e-22 98.6
MS.gene40902.t1 MTR_5g007610 30.435 322 180 15 8 306 39 339 1.12e-22 98.6
MS.gene40902.t1 MTR_2g028110 27.143 350 211 13 10 334 4 334 1.15e-22 98.6
MS.gene40902.t1 MTR_8g098830 36.875 160 97 3 179 336 37 194 1.23e-22 95.5
MS.gene40902.t1 MTR_4g107820 29.180 305 177 12 10 298 36 317 1.25e-22 98.2
MS.gene40902.t1 MTR_4g107780 29.180 305 177 12 10 298 36 317 1.25e-22 98.2
MS.gene40902.t1 MTR_4g107820 29.180 305 177 12 10 298 36 317 1.66e-22 98.2
MS.gene40902.t1 MTR_4g107780 29.180 305 177 12 10 298 36 317 1.69e-22 98.2
MS.gene40902.t1 MTR_7g028660 29.825 342 186 13 1 307 1 323 1.84e-22 97.8
MS.gene40902.t1 MTR_2g021050 26.870 361 196 13 7 334 2 327 1.89e-22 97.8
MS.gene40902.t1 MTR_3g013770 31.646 316 168 15 8 298 31 323 2.41e-22 97.4
MS.gene40902.t1 MTR_2g046920 28.528 326 189 11 7 315 21 319 2.68e-22 97.4
MS.gene40902.t1 MTR_5g046300 30.032 313 179 14 8 307 2 287 3.61e-22 96.7
MS.gene40902.t1 MTR_5g046290 30.032 313 179 14 8 307 2 287 3.61e-22 96.7
MS.gene40902.t1 MTR_8g101580 26.911 327 170 13 5 298 40 330 3.91e-22 97.1
MS.gene40902.t1 MTR_2g031680 27.378 347 211 11 10 334 6 333 3.99e-22 97.1
MS.gene40902.t1 MTR_2g028160 28.746 327 187 11 7 298 2 317 5.40e-22 97.1
MS.gene40902.t1 MTR_1g068860 29.836 305 183 8 10 298 4 293 5.46e-22 96.3
MS.gene40902.t1 MTR_2g028130 28.528 326 187 9 7 298 2 315 5.74e-22 96.7
MS.gene40902.t1 MTR_1g050542 28.239 301 181 11 5 293 53 330 5.77e-22 96.7
MS.gene40902.t1 MTR_7g056290 29.275 345 177 12 6 304 18 341 6.10e-22 96.7
MS.gene40902.t1 MTR_5g057643 34.555 191 108 5 10 190 46 229 6.16e-22 94.4
MS.gene40902.t1 MTR_2g426070 28.532 361 202 13 11 335 7 347 1.05e-21 95.9
MS.gene40902.t1 MTR_0115s0020 24.490 392 254 12 10 363 10 397 1.25e-21 95.5
MS.gene40902.t1 MTR_3g010920 28.796 382 201 19 8 360 42 381 1.65e-21 95.1
MS.gene40902.t1 MTR_1g114700 33.016 315 163 17 6 296 25 315 1.83e-21 95.1
MS.gene40902.t1 MTR_6g004660 31.230 317 180 14 10 302 16 318 1.83e-21 95.1
MS.gene40902.t1 MTR_3g083640 28.155 309 173 12 6 294 51 330 2.05e-21 95.1
MS.gene40902.t1 MTR_4g108820 30.169 295 156 13 8 298 40 288 2.12e-21 94.0
MS.gene40902.t1 MTR_3g036335 29.573 328 175 17 5 308 36 331 2.22e-21 94.7
MS.gene40902.t1 MTR_7g070880 27.500 360 205 12 10 318 21 375 2.63e-21 95.1
MS.gene40902.t1 MTR_7g070830 27.778 360 204 12 10 318 21 375 2.93e-21 94.7
MS.gene40902.t1 MTR_2g024110 27.508 309 187 12 10 299 4 294 3.14e-21 94.4
MS.gene40902.t1 MTR_4g070550 29.375 320 184 12 7 294 2 311 3.23e-21 94.4
MS.gene40902.t1 MTR_2g425980 29.650 371 199 14 7 334 2 353 3.48e-21 94.4
MS.gene40902.t1 MTR_3g010590 28.346 381 213 17 8 360 37 385 4.67e-21 94.0
MS.gene40902.t1 MTR_0667s0010 27.215 316 188 10 10 298 6 306 5.02e-21 94.0
MS.gene40902.t1 MTR_7g066000 30.422 332 187 15 6 308 21 337 5.41e-21 94.0
MS.gene40902.t1 MTR_7g078860 28.446 341 180 12 7 304 6 325 6.03e-21 93.6
MS.gene40902.t1 MTR_1g097490 31.683 303 171 15 10 298 49 329 6.27e-21 93.6
MS.gene40902.t1 MTR_1g088120 27.168 346 186 13 6 304 5 331 9.74e-21 93.2
MS.gene40902.t1 MTR_8g099460 24.412 340 209 8 10 325 5 320 9.80e-21 93.2
MS.gene40902.t1 MTR_3g010870 27.586 377 226 14 6 360 33 384 1.22e-20 92.8
MS.gene40902.t1 MTR_1g055070 29.825 285 169 13 5 264 44 322 1.22e-20 92.8
MS.gene40902.t1 MTR_7g056760 29.042 334 189 13 1 299 14 334 1.30e-20 92.8
MS.gene40902.t1 MTR_2g046800 27.844 334 184 11 6 298 10 327 1.58e-20 92.4
MS.gene40902.t1 MTR_1g115160 28.767 292 187 9 9 296 21 295 1.63e-20 92.0
MS.gene40902.t1 MTR_8g073550 39.412 170 83 6 6 162 26 188 1.68e-20 89.7
MS.gene40902.t1 MTR_2g026010 28.105 306 191 9 10 298 4 297 1.89e-20 92.0
MS.gene40902.t1 MTR_3g010520 28.620 297 169 14 8 294 23 286 1.95e-20 91.7
MS.gene40902.t1 MTR_4g031770 31.148 305 175 16 10 298 4 289 2.06e-20 91.7
MS.gene40902.t1 MTR_7g060940 28.443 334 178 11 10 306 22 331 2.75e-20 91.7
MS.gene40902.t1 MTR_2g047832 29.102 323 192 12 7 303 26 337 3.18e-20 91.7
MS.gene40902.t1 MTR_1g442850 30.723 332 170 17 9 304 4 311 3.42e-20 91.3
MS.gene40902.t1 MTR_3g036430 30.375 293 157 15 8 294 18 269 3.59e-20 90.9
MS.gene40902.t1 MTR_2g031720 28.349 321 171 13 10 298 6 299 4.56e-20 91.3
MS.gene40902.t1 MTR_3g009260 30.449 312 175 16 8 306 39 321 6.26e-20 90.5
MS.gene40902.t1 MTR_1g071010 27.523 327 198 13 4 303 9 323 6.44e-20 90.5
MS.gene40902.t1 MTR_6g053240 28.479 309 185 13 6 294 24 316 8.18e-20 90.5
MS.gene40902.t1 MTR_2g104340 26.567 335 202 9 1 298 5 332 8.67e-20 90.1
MS.gene40902.t1 MTR_3g024110 28.758 306 178 12 3 294 94 373 9.01e-20 90.5
MS.gene40902.t1 MTR_5g069760 26.984 315 198 9 9 304 5 306 1.23e-19 89.7
MS.gene40902.t1 MTR_4g023430 63.636 66 24 0 1 66 32 97 1.87e-19 86.3
MS.gene40902.t1 MTR_4g023430 45.679 81 40 2 291 367 141 221 7.98e-13 67.8
MS.gene40902.t1 MTR_3g083010 26.768 396 241 14 10 362 6 395 2.31e-19 89.4
MS.gene40902.t1 MTR_2g055970 30.097 309 175 15 9 298 210 496 2.35e-19 89.7
MS.gene40902.t1 MTR_5g057040 34.375 192 107 7 10 190 46 229 2.44e-19 90.1
MS.gene40902.t1 MTR_5g048160 26.434 401 230 18 10 361 4 388 3.02e-19 88.6
MS.gene40902.t1 MTR_7g055870 30.110 362 171 17 7 308 10 349 4.98e-19 88.2
MS.gene40902.t1 MTR_7g056003 31.138 334 171 15 10 304 15 328 5.02e-19 88.2
MS.gene40902.t1 MTR_2g031640 28.803 309 181 15 10 298 6 295 5.05e-19 87.8
MS.gene40902.t1 MTR_6g080680 25.871 402 221 17 7 359 16 389 5.13e-19 88.2
MS.gene40902.t1 MTR_7g007300 29.355 310 172 12 6 298 99 378 6.49e-19 88.2
MS.gene40902.t1 MTR_7g070440 28.701 331 186 14 4 304 1 311 7.36e-19 87.4
MS.gene40902.t1 MTR_3g024150 27.760 317 184 15 13 306 38 332 7.51e-19 87.4
MS.gene40902.t1 MTR_7g067680 30.547 311 150 17 6 294 45 311 8.17e-19 87.4
MS.gene40902.t1 MTR_7g055977 28.793 323 184 11 9 303 6 310 8.24e-19 87.4
MS.gene40902.t1 MTR_4g024890 25.564 399 243 14 1 360 1 384 9.80e-19 87.0
MS.gene40902.t1 MTR_0128s0020 29.052 327 189 11 6 304 14 325 9.89e-19 87.0
MS.gene40902.t1 MTR_7g056820 26.005 373 212 17 8 338 5 355 1.15e-18 86.7
MS.gene40902.t1 MTR_6g053260 28.526 312 182 15 3 294 330 620 1.28e-18 87.8
MS.gene40902.t1 MTR_2g461450 30.063 316 189 10 10 317 18 309 1.61e-18 86.3
MS.gene40902.t1 MTR_7g057270 27.596 337 192 12 10 308 26 348 1.84e-18 86.7
MS.gene40902.t1 MTR_7g055987 30.887 327 169 14 6 301 16 316 1.89e-18 86.3
MS.gene40902.t1 MTR_7g056390 27.826 345 182 12 6 304 14 337 2.04e-18 86.3
MS.gene40902.t1 MTR_3g006570 27.653 311 177 13 6 294 17 301 2.48e-18 85.9
MS.gene40902.t1 MTR_3g030330 30.293 307 180 14 8 301 18 303 2.79e-18 85.5
MS.gene40902.t1 MTR_5g069930 26.814 317 199 8 9 303 5 310 3.09e-18 85.5
MS.gene40902.t1 MTR_0064s0160 25.377 398 257 14 4 368 36 426 3.78e-18 85.9
MS.gene40902.t1 MTR_0760s0010 28.328 293 173 11 15 295 52 319 4.30e-18 85.1
MS.gene40902.t1 MTR_1g056710 28.939 311 181 12 6 298 30 318 7.48e-18 84.7
MS.gene40902.t1 MTR_2g078850 29.605 304 165 13 13 294 33 309 7.55e-18 84.3
MS.gene40902.t1 MTR_6g013270 27.445 317 201 10 8 309 27 329 7.82e-18 84.7
MS.gene40902.t1 MTR_1g054575 28.053 303 181 15 5 293 47 326 7.92e-18 85.5
MS.gene40902.t1 MTR_7g060960 30.816 331 148 15 10 310 32 311 8.55e-18 84.3
MS.gene40902.t1 MTR_7g066100 28.325 406 223 16 7 362 8 395 1.04e-17 84.3
MS.gene40902.t1 MTR_3g006500 27.044 318 186 12 1 298 9 300 1.31e-17 83.6
MS.gene40902.t1 MTR_5g096710 30.422 332 175 15 6 305 19 326 1.32e-17 84.0
MS.gene40902.t1 MTR_1g100763 28.125 288 147 15 16 289 4 245 1.33e-17 82.8
MS.gene40902.t1 MTR_6g017280 28.788 330 183 17 10 308 9 317 1.71e-17 83.6
MS.gene40902.t1 MTR_3g006530 27.922 308 180 15 8 294 38 324 1.81e-17 83.6
MS.gene40902.t1 MTR_5g023570 44.037 109 54 4 5 112 32 134 1.81e-17 79.0
MS.gene40902.t1 MTR_0242s0060 30.448 335 181 16 1 296 1 322 2.18e-17 83.6
MS.gene40902.t1 MTR_0242s0040 30.448 335 181 16 1 296 1 322 2.18e-17 83.6
MS.gene40902.t1 MTR_7g078040 30.028 353 188 15 1 304 1 343 2.50e-17 83.2
MS.gene40902.t1 MTR_4g013180 28.443 334 181 17 9 304 10 323 2.54e-17 83.6
MS.gene40902.t1 MTR_1g061330 24.479 384 241 16 10 368 4 363 3.34e-17 82.8
MS.gene40902.t1 MTR_4g030830 27.302 315 188 9 10 294 9 312 3.69e-17 82.4
MS.gene40902.t1 MTR_2g038680 24.378 402 244 13 10 361 16 407 4.06e-17 82.4
MS.gene40902.t1 MTR_2g021950 26.287 369 204 19 9 332 15 360 4.16e-17 82.4
MS.gene40902.t1 MTR_4g030090 26.524 328 201 11 7 308 11 324 4.28e-17 82.4
MS.gene40902.t1 MTR_6g007135 27.742 310 188 12 10 298 26 320 4.48e-17 82.4
MS.gene40902.t1 MTR_4g037465 27.246 334 184 11 8 308 19 326 5.01e-17 82.0
MS.gene40902.t1 MTR_5g008530 68.966 58 16 1 10 67 18 73 5.88e-17 75.1
MS.gene40902.t1 MTR_3g030240 27.922 308 160 18 8 294 38 304 6.13e-17 81.6
MS.gene40902.t1 MTR_7g022670 28.746 327 151 15 1 304 14 281 7.47e-17 81.3
MS.gene40902.t1 MTR_2g006360 29.605 304 149 14 13 306 49 297 7.62e-17 81.3
MS.gene40902.t1 MTR_0464s0020 28.614 339 186 14 10 304 23 349 8.04e-17 81.6
MS.gene40902.t1 MTR_2g024100 27.331 311 174 10 17 294 15 306 8.18e-17 81.6
MS.gene40902.t1 MTR_3g010970 29.293 297 164 13 13 294 51 316 8.41e-17 81.6
MS.gene40902.t1 MTR_4g013185 27.066 351 192 14 6 304 5 343 1.46e-16 80.9
MS.gene40902.t1 MTR_1g055055 27.273 308 179 13 10 305 26 300 1.71e-16 80.1
MS.gene40902.t1 MTR_1g055375 28.571 315 171 15 13 298 7 296 2.25e-16 80.1
MS.gene40902.t1 MTR_4g129190 31.405 242 116 12 10 226 6 222 2.27e-16 80.1
MS.gene40902.t1 MTR_1g115185 26.645 304 192 10 8 296 37 324 4.17e-16 79.3
MS.gene40902.t1 MTR_7g062100 27.356 329 188 12 7 304 21 329 5.19e-16 79.3
MS.gene40902.t1 MTR_1g112930 27.575 301 179 15 8 293 23 299 6.35e-16 78.6
MS.gene40902.t1 MTR_7g078840 28.169 355 182 15 9 304 9 349 6.38e-16 79.0
MS.gene40902.t1 MTR_3g011120 27.523 327 194 16 7 306 11 321 6.87e-16 78.6
MS.gene40902.t1 MTR_7g061060 27.844 334 181 14 9 308 12 319 7.26e-16 78.6
MS.gene40902.t1 MTR_7g013590 29.275 345 195 15 13 330 39 361 7.55e-16 78.6
MS.gene40902.t1 MTR_4g030110 28.406 345 174 15 1 311 21 326 7.62e-16 78.6
MS.gene40902.t1 MTR_7g050520 27.536 345 166 14 6 305 18 323 8.41e-16 78.6
MS.gene40902.t1 MTR_7g061010 27.356 329 182 11 10 306 22 325 8.55e-16 78.6
MS.gene40902.t1 MTR_2g021800 26.301 346 196 13 7 298 13 353 9.64e-16 78.6
MS.gene40902.t1 MTR_7g077070 28.446 341 186 15 10 305 16 343 1.09e-15 78.6
MS.gene40902.t1 MTR_7g061090 27.666 347 177 16 9 308 21 340 1.38e-15 77.8
MS.gene40902.t1 MTR_6g048120 28.527 319 176 14 5 294 31 326 1.46e-15 77.8
MS.gene40902.t1 MTR_7g056797 32.520 246 130 10 3 222 14 249 1.48e-15 77.8
MS.gene40902.t1 MTR_3g024040 27.562 283 182 10 16 294 37 300 1.50e-15 77.8
MS.gene40902.t1 MTR_7g050480 27.566 341 171 15 6 305 18 323 1.67e-15 77.4
MS.gene40902.t1 MTR_3g011650 32.314 229 125 11 8 224 74 284 1.73e-15 76.3
MS.gene40902.t1 MTR_2g043400 29.573 328 183 12 10 303 23 336 1.84e-15 77.8
MS.gene40902.t1 MTR_2g047892 27.019 322 185 12 6 294 17 321 1.95e-15 77.4
MS.gene40902.t1 MTR_7g056200 26.970 330 172 11 9 308 22 312 2.19e-15 77.0
MS.gene40902.t1 MTR_0128s0070 29.664 327 188 13 6 305 18 329 2.26e-15 77.4
MS.gene40902.t1 MTR_2g104280 24.205 409 250 15 1 361 5 401 2.31e-15 77.4
MS.gene40902.t1 MTR_4g080200 24.355 349 218 12 10 338 3 325 2.56e-15 76.6
MS.gene40902.t1 MTR_7g056710 28.182 330 177 15 9 308 17 316 3.10e-15 76.6
MS.gene40902.t1 MTR_4g013175 28.612 353 184 15 6 304 5 343 3.35e-15 77.0
MS.gene40902.t1 MTR_3g030350 27.586 319 187 15 4 306 29 319 3.57e-15 76.6
MS.gene40902.t1 MTR_6g086825 27.371 369 207 18 9 332 69 421 3.57e-15 77.0
MS.gene40902.t1 MTR_0054s0090 25.066 379 202 15 9 332 16 367 3.78e-15 76.6
MS.gene40902.t1 MTR_7g066850 27.301 326 178 17 6 296 19 320 4.48e-15 76.6
MS.gene40902.t1 MTR_6g090180 25.000 372 217 14 7 332 44 399 5.23e-15 76.3
MS.gene40902.t1 MTR_5g037680 26.444 329 185 12 9 298 7 317 5.35e-15 76.3
MS.gene40902.t1 MTR_3g058480 28.920 287 163 13 5 265 32 303 5.52e-15 75.5
MS.gene40902.t1 MTR_3g010620 27.393 303 169 14 8 294 34 301 5.56e-15 75.9
MS.gene40902.t1 MTR_3g009250 32.301 226 125 11 8 224 39 245 5.74e-15 74.3
MS.gene40902.t1 MTR_5g022045 25.234 321 203 10 10 299 35 349 5.92e-15 76.3
MS.gene40902.t1 MTR_4g033495 27.596 337 177 15 10 304 27 338 6.06e-15 76.3
MS.gene40902.t1 MTR_4g006270 27.184 309 169 15 10 299 4 275 6.60e-15 75.9
MS.gene40902.t1 MTR_2g025960 28.054 221 121 8 106 298 5 215 6.72e-15 75.1
MS.gene40902.t1 MTR_2g022000 25.220 341 201 12 9 298 15 352 8.33e-15 75.9
MS.gene40902.t1 MTR_7g079160 28.650 363 182 17 9 309 7 354 8.91e-15 75.9
MS.gene40902.t1 MTR_7g022600 26.012 346 205 13 1 303 14 351 1.26e-14 75.1
MS.gene40902.t1 MTR_4g011660 30.409 342 167 17 6 294 15 338 1.31e-14 75.1
MS.gene40902.t1 MTR_0128s0010 27.660 329 192 13 5 303 16 328 1.37e-14 74.7
MS.gene40902.t1 MTR_4g014370 25.248 404 243 18 9 361 10 405 1.40e-14 75.1
MS.gene40902.t1 MTR_7g055850 31.004 229 104 8 7 192 10 227 1.55e-14 73.6
MS.gene40902.t1 MTR_7g052150 28.012 332 176 17 10 305 22 326 1.57e-14 74.7
MS.gene40902.t1 MTR_6g048140 29.245 318 163 13 8 294 37 323 1.87e-14 74.3
MS.gene40902.t1 MTR_7g078900 26.629 353 194 14 1 304 3 339 1.87e-14 74.7
MS.gene40902.t1 MTR_7g056170 26.218 431 194 18 9 360 74 459 1.93e-14 74.7
MS.gene40902.t1 MTR_3g010440 34.532 139 72 5 6 133 22 152 3.19e-14 73.2
MS.gene40902.t1 MTR_4g117550 25.625 320 181 13 9 298 16 308 4.40e-14 73.2
MS.gene40902.t1 MTR_8g064890 27.893 337 184 17 9 307 15 330 5.30e-14 73.2
MS.gene40902.t1 MTR_8g013005 56.452 62 22 2 309 368 1 59 5.79e-14 66.2
MS.gene40902.t1 MTR_6g461660 26.567 335 185 15 9 298 18 336 6.23e-14 72.8
MS.gene40902.t1 MTR_6g004210 26.911 327 196 9 21 313 36 353 6.78e-14 72.8
MS.gene40902.t1 MTR_3g030310 25.890 309 186 14 8 294 19 306 7.93e-14 72.4
MS.gene40902.t1 MTR_7g066030 25.000 364 222 13 9 330 20 374 8.45e-14 72.4
MS.gene40902.t1 MTR_4g055820 26.061 330 200 12 9 298 13 338 8.86e-14 72.0
MS.gene40902.t1 MTR_6g017270 28.986 207 122 7 3 190 2 202 9.23e-14 72.0
MS.gene40902.t1 MTR_0129s0070 26.506 332 186 14 9 298 16 331 9.31e-14 72.4
MS.gene40902.t1 MTR_4g129160 26.074 349 202 14 4 306 1 339 9.53e-14 72.0
MS.gene40902.t1 MTR_3g058440 30.924 249 133 14 10 237 35 265 9.70e-14 71.6
MS.gene40902.t1 MTR_6g055210 27.679 336 201 13 7 309 19 345 1.10e-13 72.4
MS.gene40902.t1 MTR_7g061050 26.364 330 185 14 9 304 12 317 1.39e-13 71.6
MS.gene40902.t1 MTR_8g046310 24.737 380 245 15 9 364 15 377 1.74e-13 71.2
MS.gene40902.t1 MTR_2g043410 27.083 336 181 13 10 303 22 335 1.86e-13 71.6
MS.gene40902.t1 MTR_2g022170 34.921 126 71 3 13 137 7 122 2.45e-13 67.0
MS.gene40902.t1 MTR_2g078870 27.132 258 153 11 46 294 1 232 2.89e-13 70.1
MS.gene40902.t1 MTR_5g069390 27.139 339 187 15 9 298 25 352 3.04e-13 71.2
MS.gene40902.t1 MTR_7g035295 33.143 175 89 7 10 160 16 186 4.06e-13 70.5
MS.gene40902.t1 MTR_3g024130 30.233 258 131 12 70 306 24 253 5.59e-13 69.3
MS.gene40902.t1 MTR_5g097330 24.623 398 220 16 18 359 24 397 5.79e-13 70.1
MS.gene40902.t1 MTR_7g056737 28.655 342 168 19 6 308 17 321 6.36e-13 69.7
MS.gene40902.t1 MTR_7g078050 31.959 194 99 9 10 190 6 179 6.39e-13 68.2
MS.gene40902.t1 MTR_7g091630 25.075 335 208 14 5 306 27 351 7.41e-13 69.7
MS.gene40902.t1 MTR_4g031020 25.212 353 195 10 10 305 15 355 7.67e-13 69.7
MS.gene40902.t1 MTR_7g016930 26.875 320 188 12 7 301 13 311 1.06e-12 68.6
MS.gene40902.t1 MTR_3g058470 27.974 311 154 14 8 294 35 299 1.14e-12 68.9
MS.gene40902.t1 MTR_3g010870 28.509 228 128 8 6 220 33 238 1.87e-12 67.8
MS.gene40902.t1 MTR_5g068040 28.840 319 162 16 10 296 16 301 1.87e-12 68.2
MS.gene40902.t1 MTR_4g019990 26.087 322 196 10 7 296 3 314 2.08e-12 68.2
MS.gene40902.t1 MTR_5g056020 25.698 358 203 17 7 311 14 361 2.15e-12 68.6
MS.gene40902.t1 MTR_3g464470 25.532 329 191 10 7 303 4 310 2.15e-12 68.2
MS.gene40902.t1 MTR_4g130330 26.542 373 208 18 4 332 1 351 2.42e-12 68.2
MS.gene40902.t1 MTR_3g096250 33.721 172 87 10 8 162 45 206 2.65e-12 67.8
MS.gene40902.t1 MTR_3g464500 26.606 327 179 12 7 296 24 326 2.89e-12 67.8
MS.gene40902.t1 MTR_2g047200 25.301 332 198 15 6 303 15 330 3.52e-12 67.4
MS.gene40902.t1 MTR_1g068905 33.544 158 86 5 10 157 4 152 4.34e-12 66.6
MS.gene40902.t1 MTR_5g027370 22.802 364 222 13 14 345 33 369 5.89e-12 67.0
MS.gene40902.t1 MTR_5g046280 31.606 193 101 10 122 307 22 190 5.98e-12 65.5
MS.gene40902.t1 MTR_3g007380 35.938 128 71 4 13 134 33 155 6.50e-12 65.1
MS.gene40902.t1 MTR_5g027330 22.802 364 222 13 14 345 44 380 6.67e-12 67.0
MS.gene40902.t1 MTR_0134s0060 24.619 394 210 19 9 339 11 380 8.28e-12 66.6
MS.gene40902.t1 MTR_7g066010 28.409 264 143 12 9 237 20 272 8.63e-12 66.2
MS.gene40902.t1 MTR_7g062060 27.052 329 190 14 9 296 11 330 8.65e-12 66.2
MS.gene40902.t1 MTR_6g034720 39.370 127 59 4 132 248 53 171 9.25e-12 64.3
MS.gene40902.t1 MTR_2g033410 27.304 293 175 12 11 286 10 281 1.13e-11 65.9
MS.gene40902.t1 MTR_4g024870 27.391 230 151 8 11 230 45 268 2.05e-11 65.5
MS.gene40902.t1 MTR_7g050490 30.288 208 99 9 6 190 4 188 2.32e-11 62.8
MS.gene40902.t1 MTR_1g009110 24.438 356 222 16 10 336 14 351 2.58e-11 64.7
MS.gene40902.t1 MTR_7g069550 23.980 392 236 15 1 345 5 381 2.66e-11 64.7
MS.gene40902.t1 MTR_8g066440 23.645 406 236 17 7 361 20 402 2.70e-11 64.7
MS.gene40902.t1 MTR_2g031700 26.141 241 144 10 10 237 6 225 3.83e-11 63.5
MS.gene40902.t1 MTR_6g016285 26.625 323 186 12 10 294 21 330 4.50e-11 64.3
MS.gene40902.t1 MTR_6g478230 24.069 403 231 18 7 359 24 401 4.59e-11 64.3
MS.gene40902.t1 MTR_3g023940 26.110 383 222 17 8 360 32 383 4.77e-11 63.9
MS.gene40902.t1 MTR_6g092560 24.260 338 191 15 10 308 12 323 4.91e-11 64.3
MS.gene40902.t1 MTR_7g078940 27.305 282 154 10 10 247 32 306 4.94e-11 63.9
MS.gene40902.t1 MTR_7g052670 25.414 362 205 16 2 308 10 361 6.09e-11 63.9
MS.gene40902.t1 MTR_7g061100 30.137 219 107 10 9 223 12 188 7.95e-11 63.2
MS.gene40902.t1 MTR_1g029650 25.749 334 193 15 6 303 3 317 8.69e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40902.t1 AT3G23880 29.766 299 185 8 10 296 14 299 1.20e-24 103
MS.gene40902.t1 AT4G12560 28.571 357 207 15 10 334 4 344 7.34e-24 102
MS.gene40902.t1 AT4G12560 28.571 357 207 15 10 334 4 344 7.34e-24 102
MS.gene40902.t1 AT4G12560 28.571 357 207 15 10 334 4 344 7.34e-24 102
MS.gene40902.t1 AT3G06240 27.228 404 221 16 10 360 36 419 4.10e-23 100
MS.gene40902.t1 AT5G49610 28.435 313 189 12 5 303 4 295 2.05e-19 89.0
MS.gene40902.t1 AT4G22390 23.714 350 232 11 11 336 5 343 1.42e-17 84.0
MS.gene40902.t1 AT4G22390 23.714 350 232 11 11 336 5 343 1.59e-17 83.6
MS.gene40902.t1 AT1G33530 26.000 300 195 9 2 295 89 367 7.06e-17 82.0
MS.gene40902.t1 AT2G40925 24.179 335 207 11 10 316 27 342 1.73e-15 77.8
MS.gene40902.t1 AT1G12870 22.911 371 224 18 10 342 33 379 3.58e-15 76.6
MS.gene40902.t1 AT3G16210 29.317 249 141 12 7 248 2 222 2.61e-14 73.9
MS.gene40902.t1 AT3G07870 25.490 306 198 8 10 294 28 324 2.61e-14 74.3
MS.gene40902.t1 AT3G21120 24.183 306 201 12 9 294 2 296 6.02e-14 72.8
MS.gene40902.t1 AT3G17710 24.737 380 248 14 10 368 6 368 7.08e-14 72.8
MS.gene40902.t1 AT3G10430 28.326 233 142 10 10 235 5 219 1.05e-13 72.0
MS.gene40902.t1 AT3G16590 28.374 289 177 13 10 284 5 277 4.34e-13 70.1
MS.gene40902.t1 AT1G30790 24.837 306 200 11 9 294 8 303 5.15e-13 70.1
MS.gene40902.t1 AT3G08750 28.723 188 119 6 8 192 10 185 6.05e-12 66.6
MS.gene40902.t1 AT4G19940 27.673 318 172 14 5 284 30 327 1.30e-11 65.9
MS.gene40902.t1 AT2G40920 24.771 327 211 14 15 316 59 375 2.75e-11 65.1
MS.gene40902.t1 AT3G52320 23.768 345 204 12 8 327 25 335 4.26e-11 64.3
MS.gene40902.t1 AT3G18340 24.352 386 221 16 10 362 6 353 5.05e-11 63.9
MS.gene40902.t1 AT4G19930 25.215 349 206 14 5 318 38 366 6.15e-11 63.9
MS.gene40902.t1 AT2G40920 24.923 325 209 14 17 316 2 316 7.07e-11 63.5
MS.gene40902.t1 AT1G51290 26.370 292 165 12 10 285 6 263 7.07e-11 63.5

Find 75 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTTCCTTTCATTTAA+TGG 0.102686 1.2:-43567694 MS.gene40902:CDS
GTTCGACAGATTGTAATTTA+TGG 0.146258 1.2:-43567626 MS.gene40902:CDS
GAAATTTGAAGGTAAATAAT+TGG 0.177058 1.2:+43567974 None:intergenic
TATTTAGGAAGCGGAAAATT+AGG 0.178432 1.2:+43568116 None:intergenic
TATTGTAAAGATTCAGAAAA+TGG 0.209052 1.2:-43567366 MS.gene40902:CDS
TGGTAACCTTAATAAGATTT+TGG 0.210360 1.2:+43568340 None:intergenic
ATTTCTCAGTCTATGGGTTT+TGG 0.213090 1.2:-43567592 MS.gene40902:CDS
ACTTGGATAAAGTTGATATA+TGG 0.215529 1.2:-43567566 MS.gene40902:CDS
TGATCACCAAAATCTTATTA+AGG 0.243263 1.2:-43568346 MS.gene40902:CDS
TTAAGATCAAAATAATATTT+AGG 0.244005 1.2:+43568101 None:intergenic
TTAGAGGATTTCTCAGTCTA+TGG 0.277856 1.2:-43567599 MS.gene40902:CDS
TTAATGGAAAGGATACTTCT+AGG 0.298109 1.2:-43567678 MS.gene40902:CDS
TTCGACAGATTGTAATTTAT+GGG 0.302194 1.2:-43567625 MS.gene40902:CDS
CTCCCGGATGATATTGAATA+TGG 0.311329 1.2:-43567648 MS.gene40902:CDS
GGAGAAAGCTCACTATAAAA+AGG 0.324382 1.2:+43567798 None:intergenic
ATTTAGGAAGCGGAAAATTA+GGG 0.337210 1.2:+43568117 None:intergenic
TTAAGCTTGCTCAGTGTCAC+TGG 0.358415 1.2:+43567302 None:intergenic
GATAGCACATCAAGTGAGTT+TGG 0.375772 1.2:+43567885 None:intergenic
TGTAATTTATGGGTATTTAG+AGG 0.380678 1.2:-43567615 MS.gene40902:CDS
AAACGAATAAGAGACTTAAC+TGG 0.393097 1.2:+43568320 None:intergenic
CGGAAGACGCATGGCGGAGG+TGG 0.401862 1.2:-43568396 None:intergenic
TCTTCAGTGGGGCTATTCAC+TGG 0.406807 1.2:-43567749 MS.gene40902:CDS
AAATTTGAAGGTAAATAATT+GGG 0.422208 1.2:+43567975 None:intergenic
AAAGATTCAGAAAATGGATT+CGG 0.424007 1.2:-43567360 MS.gene40902:CDS
AATACAAAGTGAAGTCATCT+TGG 0.433399 1.2:-43567533 MS.gene40902:CDS
TACAAGGGAAATGTAAGAAA+TGG 0.436078 1.2:+43567482 None:intergenic
TTGATGTGCTATCTCGCATT+GGG 0.444449 1.2:-43567875 MS.gene40902:CDS
TACAATAATCGTTATGCTCT+AGG 0.448234 1.2:+43567382 None:intergenic
ATGTAGAGGGTTTATATTCG+TGG 0.450616 1.2:-43568066 MS.gene40902:CDS
CTTGGATAAAGTTGATATAT+GGG 0.451265 1.2:-43567565 MS.gene40902:CDS
GGATTCCATACGTACATGAT+TGG 0.452619 1.2:+43568035 None:intergenic
CAGTGGGGCTATTCACTGGT+TGG 0.459025 1.2:-43567745 MS.gene40902:CDS
GAAACTCAGGAGTTGTTGTC+AGG 0.460678 1.2:+43568195 None:intergenic
TCAAATCAGTTTGTAAGTCA+TGG 0.474541 1.2:-43568298 MS.gene40902:CDS
GAACCATATTCAATATCATC+CGG 0.477125 1.2:+43567645 None:intergenic
ATCAATTCATCGGGCAGATA+CGG 0.477260 1.2:+43568365 None:intergenic
CTTGATGTGCTATCTCGCAT+TGG 0.481694 1.2:-43567876 MS.gene40902:CDS
CGAGTCAAGAGATGATTACT+TGG 0.482225 1.2:-43567934 MS.gene40902:CDS
TTCAGAAAATGGATTCGGAT+TGG 0.484102 1.2:-43567355 MS.gene40902:CDS
TGGTAGAGTCCGTCTTCAGT+GGG 0.486964 1.2:-43567761 MS.gene40902:CDS
TAGAGGATTTCTCAGTCTAT+GGG 0.489737 1.2:-43567598 MS.gene40902:CDS
TCAAAATAATATTTAGGAAG+CGG 0.494493 1.2:+43568107 None:intergenic
TTTCCTTTCATTTAATGGAA+AGG 0.494686 1.2:-43567689 MS.gene40902:CDS
CGTGATATTGTTGGAACAGA+TGG 0.501333 1.2:-43567444 MS.gene40902:CDS
TATCCTTTCCATTAAATGAA+AGG 0.507802 1.2:+43567686 None:intergenic
CAGCGGAAGACGCATGGCGG+AGG 0.508658 1.2:-43568399 None:intergenic
AAATTAGGGTTCAGTAGTAC+AGG 0.516640 1.2:+43568131 None:intergenic
GTTGGAACAGATGGATGTAC+TGG 0.522283 1.2:-43567435 MS.gene40902:CDS
AAGTTAGAGGTTCATGTAGA+GGG 0.527722 1.2:-43568079 MS.gene40902:CDS
AGGTATTTGTTTATGAACTC+CGG 0.528595 1.2:+43568007 None:intergenic
TGTTTATGAACTCCGGTGGA+TGG 0.534664 1.2:+43568014 None:intergenic
TCTACGAGTGTGTGTTGAAG+AGG 0.539919 1.2:+43568226 None:intergenic
AAATAATTGGGAGGAGGCGA+AGG 0.544287 1.2:+43567987 None:intergenic
GAAGGTAAATAATTGGGAGG+AGG 0.546092 1.2:+43567981 None:intergenic
TAAGCTTGCTCAGTGTCACT+GGG 0.546819 1.2:+43567303 None:intergenic
TGGTGAGATATGATGACGAA+GGG 0.551766 1.2:-43567410 MS.gene40902:CDS
TCTACCACAGGATAAGCAAA+AGG 0.554822 1.2:+43567777 None:intergenic
GTGGTAGAGTCCGTCTTCAG+TGG 0.561611 1.2:-43567762 MS.gene40902:CDS
AAAGTTAGAGGTTCATGTAG+AGG 0.561749 1.2:-43568080 MS.gene40902:CDS
TCATCGGGCAGATACGGTGC+TGG 0.564481 1.2:+43568371 None:intergenic
ACTTCTAGGAATTCCTCTCC+CGG 0.575482 1.2:-43567664 MS.gene40902:CDS
GTGAATAGCCCCACTGAAGA+CGG 0.587502 1.2:+43567752 None:intergenic
CTGAAGACGGACTCTACCAC+AGG 0.587672 1.2:+43567765 None:intergenic
TTTCAATGAGAGCTAATGTG+TGG 0.592234 1.2:-43567848 MS.gene40902:CDS
AACCATATTCAATATCATCC+GGG 0.594830 1.2:+43567646 None:intergenic
TATTCAATATCATCCGGGAG+AGG 0.596373 1.2:+43567651 None:intergenic
GCAGTGAACAATGAATCTAC+AGG 0.598968 1.2:+43568164 None:intergenic
TACGTATGGAATCCATCCAC+CGG 0.599416 1.2:-43568026 MS.gene40902:CDS
TATTTGTTTATGAACTCCGG+TGG 0.611706 1.2:+43568010 None:intergenic
ACAGGTATAGATCGAAACTC+AGG 0.616326 1.2:+43568182 None:intergenic
TTTGAAGGTAAATAATTGGG+AGG 0.620951 1.2:+43567978 None:intergenic
AACAGATGGATGTACTGGAT+TGG 0.639843 1.2:-43567430 MS.gene40902:CDS
GGTGAGATATGATGACGAAG+GGG 0.666620 1.2:-43567409 MS.gene40902:CDS
TTGGTGAGATATGATGACGA+AGG 0.671162 1.2:-43567411 MS.gene40902:CDS
GGTAGAGTCCGTCTTCAGTG+GGG 0.720301 1.2:-43567760 MS.gene40902:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAGATCAAAATAATATTT+AGG + chr1.2:43567590-43567609 None:intergenic 10.0%
!! AAATTTGAAGGTAAATAATT+GGG + chr1.2:43567716-43567735 None:intergenic 15.0%
!! GAAATTTGAAGGTAAATAAT+TGG + chr1.2:43567717-43567736 None:intergenic 20.0%
!! TATTGTAAAGATTCAGAAAA+TGG - chr1.2:43568322-43568341 MS.gene40902:CDS 20.0%
!! TATTGTTTCCTTTCATTTAA+TGG - chr1.2:43567994-43568013 MS.gene40902:CDS 20.0%
!! TCAAAATAATATTTAGGAAG+CGG + chr1.2:43567584-43567603 None:intergenic 20.0%
!!! CTTCAAATTTCTATGTTTTT+GGG - chr1.2:43567726-43567745 MS.gene40902:CDS 20.0%
!!! TATTTTGATCTTAAAGTTAG+AGG - chr1.2:43567596-43567615 MS.gene40902:CDS 20.0%
! ACTATAAAAAGGTAAATGTG+TGG + chr1.2:43567882-43567901 None:intergenic 25.0%
! CCAAAAACATAGAAATTTGA+AGG + chr1.2:43567728-43567747 None:intergenic 25.0%
! CTATAAAAAGGTAAATGTGT+GGG + chr1.2:43567881-43567900 None:intergenic 25.0%
! TATCCTTTCCATTAAATGAA+AGG + chr1.2:43568005-43568024 None:intergenic 25.0%
! TGATCACCAAAATCTTATTA+AGG - chr1.2:43567342-43567361 MS.gene40902:CDS 25.0%
! TGTAATTTATGGGTATTTAG+AGG - chr1.2:43568073-43568092 MS.gene40902:CDS 25.0%
! TTCGACAGATTGTAATTTAT+GGG - chr1.2:43568063-43568082 MS.gene40902:CDS 25.0%
! TTTCCTTTCATTTAATGGAA+AGG - chr1.2:43567999-43568018 MS.gene40902:CDS 25.0%
!! AAAGATTCAGAAAATGGATT+CGG - chr1.2:43568328-43568347 MS.gene40902:CDS 25.0%
!! ACTTTTTGTACAACATACAA+GGG + chr1.2:43568224-43568243 None:intergenic 25.0%
!! CCTTCAAATTTCTATGTTTT+TGG - chr1.2:43567725-43567744 MS.gene40902:CDS 25.0%
!! TGGTAACCTTAATAAGATTT+TGG + chr1.2:43567351-43567370 None:intergenic 25.0%
!!! ACTTGGATAAAGTTGATATA+TGG - chr1.2:43568122-43568141 MS.gene40902:CDS 25.0%
!!! CTTGGATAAAGTTGATATAT+GGG - chr1.2:43568123-43568142 MS.gene40902:CDS 25.0%
AAACGAATAAGAGACTTAAC+TGG + chr1.2:43567371-43567390 None:intergenic 30.0%
AACCATATTCAATATCATCC+GGG + chr1.2:43568045-43568064 None:intergenic 30.0%
AATACAAAGTGAAGTCATCT+TGG - chr1.2:43568155-43568174 MS.gene40902:CDS 30.0%
ACAAAAAGTCGTGATATTGT+TGG - chr1.2:43568235-43568254 MS.gene40902:CDS 30.0%
AGGTATTTGTTTATGAACTC+CGG + chr1.2:43567684-43567703 None:intergenic 30.0%
ATTTAGGAAGCGGAAAATTA+GGG + chr1.2:43567574-43567593 None:intergenic 30.0%
GAACCATATTCAATATCATC+CGG + chr1.2:43568046-43568065 None:intergenic 30.0%
GTTCGACAGATTGTAATTTA+TGG - chr1.2:43568062-43568081 MS.gene40902:CDS 30.0%
TACAAGGGAAATGTAAGAAA+TGG + chr1.2:43568209-43568228 None:intergenic 30.0%
TACAATAATCGTTATGCTCT+AGG + chr1.2:43568309-43568328 None:intergenic 30.0%
TATTTAGGAAGCGGAAAATT+AGG + chr1.2:43567575-43567594 None:intergenic 30.0%
TCAAATCAGTTTGTAAGTCA+TGG - chr1.2:43567390-43567409 MS.gene40902:CDS 30.0%
TTAATGGAAAGGATACTTCT+AGG - chr1.2:43568010-43568029 MS.gene40902:CDS 30.0%
TTTGAAGGTAAATAATTGGG+AGG + chr1.2:43567713-43567732 None:intergenic 30.0%
! GACTTTTTGTACAACATACA+AGG + chr1.2:43568225-43568244 None:intergenic 30.0%
!! ATTTTGGTGATCAATTCATC+GGG + chr1.2:43567335-43567354 None:intergenic 30.0%
!! GATTTTGGTGATCAATTCAT+CGG + chr1.2:43567336-43567355 None:intergenic 30.0%
AAAGTTAGAGGTTCATGTAG+AGG - chr1.2:43567608-43567627 MS.gene40902:CDS 35.0%
AAATTAGGGTTCAGTAGTAC+AGG + chr1.2:43567560-43567579 None:intergenic 35.0%
AAGTTAGAGGTTCATGTAGA+GGG - chr1.2:43567609-43567628 MS.gene40902:CDS 35.0%
ATGTAGAGGGTTTATATTCG+TGG - chr1.2:43567622-43567641 MS.gene40902:CDS 35.0%
GGAGAAAGCTCACTATAAAA+AGG + chr1.2:43567893-43567912 None:intergenic 35.0%
TAGAGGATTTCTCAGTCTAT+GGG - chr1.2:43568090-43568109 MS.gene40902:CDS 35.0%
TATTTGTTTATGAACTCCGG+TGG + chr1.2:43567681-43567700 None:intergenic 35.0%
TTAGAGGATTTCTCAGTCTA+TGG - chr1.2:43568089-43568108 MS.gene40902:CDS 35.0%
TTTCAATGAGAGCTAATGTG+TGG - chr1.2:43567840-43567859 MS.gene40902:CDS 35.0%
! ATTTCTCAGTCTATGGGTTT+TGG - chr1.2:43568096-43568115 MS.gene40902:CDS 35.0%
! CTTTTCCAATCATGTACGTA+TGG - chr1.2:43567648-43567667 MS.gene40902:CDS 35.0%
! TTCAGAAAATGGATTCGGAT+TGG - chr1.2:43568333-43568352 MS.gene40902:CDS 35.0%
! TTTCTCAGTCTATGGGTTTT+GGG - chr1.2:43568097-43568116 MS.gene40902:CDS 35.0%
AACAGATGGATGTACTGGAT+TGG - chr1.2:43568258-43568277 MS.gene40902:CDS 40.0%
ACAGGTATAGATCGAAACTC+AGG + chr1.2:43567509-43567528 None:intergenic 40.0%
ATCAATTCATCGGGCAGATA+CGG + chr1.2:43567326-43567345 None:intergenic 40.0%
CGAGTCAAGAGATGATTACT+TGG - chr1.2:43567754-43567773 MS.gene40902:CDS 40.0%
CGTGATATTGTTGGAACAGA+TGG - chr1.2:43568244-43568263 MS.gene40902:CDS 40.0%
CTCCCGGATGATATTGAATA+TGG - chr1.2:43568040-43568059 MS.gene40902:CDS 40.0%
GAAGGTAAATAATTGGGAGG+AGG + chr1.2:43567710-43567729 None:intergenic 40.0%
GATAGCACATCAAGTGAGTT+TGG + chr1.2:43567806-43567825 None:intergenic 40.0%
GCAGTGAACAATGAATCTAC+AGG + chr1.2:43567527-43567546 None:intergenic 40.0%
GGATTCCATACGTACATGAT+TGG + chr1.2:43567656-43567675 None:intergenic 40.0%
TATTCAATATCATCCGGGAG+AGG + chr1.2:43568040-43568059 None:intergenic 40.0%
TCTACCACAGGATAAGCAAA+AGG + chr1.2:43567914-43567933 None:intergenic 40.0%
TTGATGTGCTATCTCGCATT+GGG - chr1.2:43567813-43567832 MS.gene40902:CDS 40.0%
! TGGTGAGATATGATGACGAA+GGG - chr1.2:43568278-43568297 MS.gene40902:CDS 40.0%
! TTCTCAGTCTATGGGTTTTG+GGG - chr1.2:43568098-43568117 MS.gene40902:CDS 40.0%
! TTCTCCTTTTGCTTATCCTG+TGG - chr1.2:43567907-43567926 MS.gene40902:CDS 40.0%
! TTGGTGAGATATGATGACGA+AGG - chr1.2:43568277-43568296 MS.gene40902:CDS 40.0%
AAATAATTGGGAGGAGGCGA+AGG + chr1.2:43567704-43567723 None:intergenic 45.0%
CTTGATGTGCTATCTCGCAT+TGG - chr1.2:43567812-43567831 MS.gene40902:CDS 45.0%
GAAACTCAGGAGTTGTTGTC+AGG + chr1.2:43567496-43567515 None:intergenic 45.0%
GTTGGAACAGATGGATGTAC+TGG - chr1.2:43568253-43568272 MS.gene40902:CDS 45.0%
TACGTATGGAATCCATCCAC+CGG - chr1.2:43567662-43567681 MS.gene40902:CDS 45.0%
TCTACGAGTGTGTGTTGAAG+AGG + chr1.2:43567465-43567484 None:intergenic 45.0%
TGTTTATGAACTCCGGTGGA+TGG + chr1.2:43567677-43567696 None:intergenic 45.0%
! ACTTCTAGGAATTCCTCTCC+CGG - chr1.2:43568024-43568043 MS.gene40902:CDS 45.0%
! GGTGAGATATGATGACGAAG+GGG - chr1.2:43568279-43568298 MS.gene40902:CDS 45.0%
! TAAGCTTGCTCAGTGTCACT+GGG + chr1.2:43568388-43568407 None:intergenic 45.0%
! TTAAGCTTGCTCAGTGTCAC+TGG + chr1.2:43568389-43568408 None:intergenic 45.0%
!! TCTCAGTCTATGGGTTTTGG+GGG - chr1.2:43568099-43568118 MS.gene40902:CDS 45.0%
GTGAATAGCCCCACTGAAGA+CGG + chr1.2:43567939-43567958 None:intergenic 50.0%
TCTTCAGTGGGGCTATTCAC+TGG - chr1.2:43567939-43567958 MS.gene40902:CDS 50.0%
TGGTAGAGTCCGTCTTCAGT+GGG - chr1.2:43567927-43567946 MS.gene40902:CDS 50.0%
!!! TCTATGGGTTTTGGGGGACT+TGG - chr1.2:43568105-43568124 MS.gene40902:CDS 50.0%
CAGTGGGGCTATTCACTGGT+TGG - chr1.2:43567943-43567962 MS.gene40902:CDS 55.0%
GGTAGAGTCCGTCTTCAGTG+GGG - chr1.2:43567928-43567947 MS.gene40902:CDS 55.0%
GTGGTAGAGTCCGTCTTCAG+TGG - chr1.2:43567926-43567945 MS.gene40902:CDS 55.0%
! CTGAAGACGGACTCTACCAC+AGG + chr1.2:43567926-43567945 None:intergenic 55.0%
TCATCGGGCAGATACGGTGC+TGG + chr1.2:43567320-43567339 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 43567302 43568408 43567302 ID=MS.gene40902
chr1.2 mRNA 43567302 43568408 43567302 ID=MS.gene40902.t1;Parent=MS.gene40902
chr1.2 exon 43567302 43568408 43567302 ID=MS.gene40902.t1.exon1;Parent=MS.gene40902.t1
chr1.2 CDS 43567302 43568408 43567302 ID=cds.MS.gene40902.t1;Parent=MS.gene40902.t1
Gene Sequence

>MS.gene40902

ATGGCGGAGGTGGATCCAGCACCGTATCTGCCCGATGAATTGATCACCAAAATCTTATTAAGGTTACCAGTTAAGTCTCTTATTCGTTTCAAATCAGTTTGTAAGTCATGGTTTTCTCTTATCTCTGATTCTCACTTTGCAAATTCACATTTTCAACTTACCTCTTCAACACACACTCGTAGAATTCTCTTCCTGACAACAACTCCTGAGTTTCGATCTATACCTGTAGATTCATTGTTCACTGCTGATTCTGCTCCTGTACTACTGAACCCTAATTTTCCGCTTCCTAAATATTATTTTGATCTTAAAGTTAGAGGTTCATGTAGAGGGTTTATATTCGTGGAGTCTTTTCCAATCATGTACGTATGGAATCCATCCACCGGAGTTCATAAACAAATACCTTCGCCTCCTCCCAATTATTTACCTTCAAATTTCTATGTTTTTGGGTATGACGAGTCAAGAGATGATTACTTGGTAGTTGTAGTATACTATGATTTTATTCCAAACTCACTTGATGTGCTATCTCGCATTGGGATTTTTTCAATGAGAGCTAATGTGTGGAACGAAATTGTGAGTCCCACACATTTACCTTTTTATAGTGAGCTTTCTCCTTTTGCTTATCCTGTGGTAGAGTCCGTCTTCAGTGGGGCTATTCACTGGTTGGCTATTCGTCACGATACGCGTGAGTATGTTATTGTTTCCTTTCATTTAATGGAAAGGATACTTCTAGGAATTCCTCTCCCGGATGATATTGAATATGGTTCGACAGATTGTAATTTATGGGTATTTAGAGGATTTCTCAGTCTATGGGTTTTGGGGGACTTGGATAAAGTTGATATATGGGTGATGAAAGAATACAAAGTGAAGTCATCTTGGACTAAAACTCTTGTTCTTGATTTGCATACCATTTCTTACATTTCCCTTGTATGTTGTACAAAAAGTCGTGATATTGTTGGAACAGATGGATGTACTGGATTGGTGAGATATGATGACGAAGGGGAGTTCCTAGAGCATAACGATTATTGTAAAGATTCAGAAAATGGATTCGGATTGGTTGTGTATACAGAGTCTCTGCTTTCGTTGCCCAGTGACACTGAGCAAGCTTAA

Protein sequence

>MS.gene40902.t1

MAEVDPAPYLPDELITKILLRLPVKSLIRFKSVCKSWFSLISDSHFANSHFQLTSSTHTRRILFLTTTPEFRSIPVDSLFTADSAPVLLNPNFPLPKYYFDLKVRGSCRGFIFVESFPIMYVWNPSTGVHKQIPSPPPNYLPSNFYVFGYDESRDDYLVVVVYYDFIPNSLDVLSRIGIFSMRANVWNEIVSPTHLPFYSELSPFAYPVVESVFSGAIHWLAIRHDTREYVIVSFHLMERILLGIPLPDDIEYGSTDCNLWVFRGFLSLWVLGDLDKVDIWVMKEYKVKSSWTKTLVLDLHTISYISLVCCTKSRDIVGTDGCTGLVRYDDEGEFLEHNDYCKDSENGFGLVVYTESLLSLPSDTEQA