AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063474


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063474.t1 MTR_4g109270 65.041 369 114 9 1 359 1 364 3.62e-149 425
MS.gene063474.t1 MTR_3g103020 57.724 369 138 10 4 359 15 378 1.64e-126 368
MS.gene063474.t1 MTR_3g034180 55.703 377 145 9 1 358 115 488 1.70e-126 372
MS.gene063474.t1 MTR_3g034130 55.220 364 142 8 1 345 1 362 5.67e-121 354
MS.gene063474.t1 MTR_3g034160 53.989 376 153 7 1 358 1 374 1.76e-120 353
MS.gene063474.t1 MTR_4g117770 55.191 366 154 6 2 359 4 367 2.07e-120 352
MS.gene063474.t1 MTR_4g117810 55.191 366 154 6 2 359 4 367 2.07e-120 352
MS.gene063474.t1 MTR_4g117850 56.948 367 130 10 7 356 21 376 1.17e-119 351
MS.gene063474.t1 MTR_4g117780 53.552 366 160 6 2 359 4 367 1.11e-117 345
MS.gene063474.t1 MTR_4g023080 54.670 364 148 12 1 358 1 353 1.44e-112 332
MS.gene063474.t1 MTR_4g021785 54.521 365 150 10 1 359 1 355 9.10e-112 330
MS.gene063474.t1 MTR_4g023090 51.047 382 157 12 2 358 9 385 6.35e-111 329
MS.gene063474.t1 MTR_4g109280 54.348 368 145 11 4 359 3 359 1.17e-108 322
MS.gene063474.t1 MTR_4g122850 52.113 355 153 10 20 359 12 364 1.78e-106 317
MS.gene063474.t1 MTR_4g116330 50.532 376 157 12 2 359 16 380 9.40e-106 315
MS.gene063474.t1 MTR_4g094365 50.943 371 163 11 1 359 1 364 5.95e-105 313
MS.gene063474.t1 MTR_8g433040 51.913 366 144 10 8 359 17 364 2.12e-104 311
MS.gene063474.t1 MTR_8g032380 51.913 366 144 10 8 359 17 364 2.12e-104 311
MS.gene063474.t1 MTR_5g070080 50.394 381 157 10 8 359 9 386 3.19e-104 311
MS.gene063474.t1 MTR_5g070130 50.262 382 162 14 1 359 1 377 2.62e-103 309
MS.gene063474.t1 MTR_6g060650 52.703 370 152 11 8 358 7 372 8.77e-103 308
MS.gene063474.t1 MTR_5g097210 50.413 363 152 10 9 355 9 359 1.28e-101 305
MS.gene063474.t1 MTR_5g070088 48.843 389 159 11 1 356 1 382 8.64e-101 303
MS.gene063474.t1 MTR_4g023380 49.100 389 149 12 2 359 9 379 5.26e-99 298
MS.gene063474.t1 MTR_4g023440 49.725 364 135 10 2 359 11 332 2.03e-96 290
MS.gene063474.t1 MTR_4g023130 49.587 363 127 11 1 358 1 312 1.44e-95 287
MS.gene063474.t1 MTR_4g023070 48.404 376 159 11 9 358 3 369 2.87e-94 286
MS.gene063474.t1 MTR_1g055135 48.128 374 164 12 7 359 11 375 3.72e-94 286
MS.gene063474.t1 MTR_4g117720 48.942 378 131 15 1 359 44 378 9.91e-94 285
MS.gene063474.t1 MTR_4g023190 51.111 360 155 13 8 357 9 357 3.22e-93 283
MS.gene063474.t1 MTR_4g023120 46.950 377 165 10 9 359 3 370 4.76e-92 280
MS.gene063474.t1 MTR_4g023200 50.289 346 150 12 23 357 24 358 1.09e-91 279
MS.gene063474.t1 MTR_4g118380 50.000 358 142 11 7 333 6 357 5.15e-91 277
MS.gene063474.t1 MTR_4g023150 50.416 361 157 12 8 357 9 358 7.68e-91 276
MS.gene063474.t1 MTR_8g032390 47.339 357 153 8 8 354 39 370 1.54e-89 274
MS.gene063474.t1 MTR_4g117750 48.378 370 157 11 9 358 3 358 2.31e-88 274
MS.gene063474.t1 MTR_4g117750 55.963 109 43 3 254 357 373 481 3.69e-25 106
MS.gene063474.t1 MTR_8g013010 54.478 268 99 7 8 263 53 309 8.62e-86 262
MS.gene063474.t1 MTR_4g116330 46.257 374 137 15 2 359 16 341 5.33e-84 258
MS.gene063474.t1 MTR_4g117870 48.475 295 108 6 72 359 10 267 2.73e-81 249
MS.gene063474.t1 MTR_1g055165 43.014 365 152 9 2 359 3 318 4.76e-78 242
MS.gene063474.t1 MTR_8g433030 43.539 356 135 9 8 354 39 337 3.75e-71 225
MS.gene063474.t1 MTR_1g055195 46.713 289 133 9 82 359 200 478 1.72e-66 218
MS.gene063474.t1 MTR_4g121580 42.939 347 149 14 1 327 1 318 8.42e-66 213
MS.gene063474.t1 MTR_4g116340 47.679 237 97 5 2 229 29 247 8.50e-61 196
MS.gene063474.t1 MTR_2g048580 38.017 363 187 15 8 359 7 342 3.35e-59 194
MS.gene063474.t1 MTR_7g079370 40.634 347 163 14 38 353 16 350 1.96e-58 193
MS.gene063474.t1 MTR_7g079400 40.864 301 155 10 76 359 43 337 7.30e-58 191
MS.gene063474.t1 MTR_4g118400 44.922 256 113 6 101 353 64 294 8.96e-56 184
MS.gene063474.t1 MTR_8g040935 51.232 203 85 7 168 359 9 208 2.93e-54 177
MS.gene063474.t1 MTR_4g116320 49.083 218 91 6 154 356 43 255 1.82e-53 177
MS.gene063474.t1 MTR_8g102520 36.512 367 167 12 8 359 7 322 1.42e-51 174
MS.gene063474.t1 MTR_4g117530 45.679 243 88 8 125 359 47 253 1.81e-50 169
MS.gene063474.t1 MTR_4g118370 42.570 249 107 8 120 356 33 257 5.37e-50 168
MS.gene063474.t1 MTR_4g117430 55.063 158 65 3 108 265 3 154 6.99e-48 159
MS.gene063474.t1 MTR_6g463430 49.231 195 82 5 174 359 16 202 4.13e-47 159
MS.gene063474.t1 MTR_4g109290 52.047 171 40 6 1 165 1 135 2.19e-41 144
MS.gene063474.t1 MTR_4g109290 64.151 53 18 1 308 359 136 188 1.29e-11 63.2
MS.gene063474.t1 MTR_1g055175 44.041 193 101 4 174 359 9 201 6.29e-41 143
MS.gene063474.t1 MTR_7g079420 34.018 341 166 13 39 359 843 1144 3.30e-37 142
MS.gene063474.t1 MTR_4g114700 37.255 255 103 8 108 350 9 218 1.73e-36 132
MS.gene063474.t1 MTR_7g117720 42.991 214 83 7 2 201 3 191 3.16e-36 132
MS.gene063474.t1 MTR_7g117720 50.575 87 37 3 274 354 186 272 3.96e-12 66.2
MS.gene063474.t1 MTR_1g055250 39.904 208 112 7 149 346 49 253 5.81e-34 128
MS.gene063474.t1 MTR_1g094210 30.133 375 201 16 7 351 55 398 9.30e-32 124
MS.gene063474.t1 MTR_4g107820 29.167 360 228 12 9 351 36 385 2.59e-31 122
MS.gene063474.t1 MTR_4g107780 29.167 360 228 12 9 351 36 385 2.59e-31 122
MS.gene063474.t1 MTR_4g107780 29.167 360 228 12 9 351 36 385 5.39e-31 122
MS.gene063474.t1 MTR_4g107820 29.167 360 228 12 9 351 36 385 6.34e-31 121
MS.gene063474.t1 MTR_1g094210 30.595 353 184 16 7 329 55 376 9.13e-31 121
MS.gene063474.t1 MTR_5g069120 41.989 181 84 6 19 182 1 177 1.88e-30 114
MS.gene063474.t1 MTR_5g023000 62.366 93 33 2 269 359 7 99 4.42e-30 111
MS.gene063474.t1 MTR_4g133170 30.460 348 198 19 6 327 1 330 7.40e-30 118
MS.gene063474.t1 MTR_4g118360 53.043 115 49 3 249 359 13 126 4.19e-29 109
MS.gene063474.t1 MTR_6g034720 44.898 147 65 4 102 240 31 169 4.31e-29 112
MS.gene063474.t1 MTR_2g021190 30.504 377 209 17 6 351 18 372 4.81e-29 115
MS.gene063474.t1 MTR_8g101580 27.824 363 235 11 6 351 42 394 5.86e-29 115
MS.gene063474.t1 MTR_2g426020 30.633 395 212 18 8 356 5 383 9.86e-29 115
MS.gene063474.t1 MTR_1g097490 27.348 362 226 13 8 351 48 390 2.73e-28 114
MS.gene063474.t1 MTR_2g021150 29.940 334 190 15 6 311 11 328 3.37e-28 113
MS.gene063474.t1 MTR_4g108820 30.333 300 166 9 7 302 40 300 2.04e-27 110
MS.gene063474.t1 MTR_5g022420 27.321 377 231 15 2 351 17 377 3.00e-27 110
MS.gene063474.t1 MTR_1g097560 27.824 363 219 15 8 351 35 373 4.54e-27 110
MS.gene063474.t1 MTR_1g097330 30.838 334 188 16 1 311 8 321 4.26e-26 108
MS.gene063474.t1 MTR_4g055060 30.721 319 179 13 5 298 26 327 8.97e-26 107
MS.gene063474.t1 MTR_3g036290 31.464 321 184 13 7 315 20 316 9.08e-26 106
MS.gene063474.t1 MTR_2g055970 29.781 366 218 19 9 351 211 560 9.96e-26 108
MS.gene063474.t1 MTR_1g068835 29.178 353 200 15 9 331 4 336 1.46e-25 106
MS.gene063474.t1 MTR_1g050542 27.397 365 229 13 7 351 56 404 5.32e-25 105
MS.gene063474.t1 MTR_1g114700 27.926 376 227 12 6 351 26 387 5.53e-25 104
MS.gene063474.t1 MTR_5g011200 30.508 295 174 15 9 284 17 299 1.01e-24 103
MS.gene063474.t1 MTR_0044s0300 26.684 386 222 17 1 351 30 389 1.13e-24 103
MS.gene063474.t1 MTR_3g007330 30.655 336 201 12 6 327 45 362 1.30e-24 103
MS.gene063474.t1 MTR_2g024110 26.562 384 235 16 6 356 1 370 1.80e-24 103
MS.gene063474.t1 MTR_3g083640 27.446 368 228 16 6 351 52 402 1.85e-24 103
MS.gene063474.t1 MTR_6g065980 28.912 377 219 19 1 351 5 358 3.29e-24 102
MS.gene063474.t1 MTR_2g078900 29.769 346 177 18 2 315 23 334 4.13e-24 102
MS.gene063474.t1 MTR_1g055070 30.980 255 139 11 6 231 46 292 1.51e-23 100
MS.gene063474.t1 MTR_8g467140 31.250 304 171 15 9 291 32 318 1.58e-23 99.8
MS.gene063474.t1 MTR_3g010430 27.532 385 215 18 6 351 33 392 2.58e-23 100
MS.gene063474.t1 MTR_3g014540 30.491 387 201 20 2 351 22 377 5.08e-23 99.4
MS.gene063474.t1 MTR_8g098830 40.120 167 84 7 174 330 35 195 9.71e-23 95.5
MS.gene063474.t1 MTR_2g028140 28.125 320 179 13 8 284 4 315 1.02e-22 99.0
MS.gene063474.t1 MTR_5g057790 29.888 358 226 14 9 351 46 393 1.41e-22 98.2
MS.gene063474.t1 MTR_2g046920 28.479 309 187 9 7 297 22 314 1.50e-22 97.8
MS.gene063474.t1 MTR_3g006670 30.671 313 181 13 6 298 46 342 1.98e-22 97.8
MS.gene063474.t1 MTR_3g007410 30.563 373 203 20 12 352 55 403 2.63e-22 97.4
MS.gene063474.t1 MTR_3g036430 29.054 296 168 13 4 292 15 275 3.45e-22 96.3
MS.gene063474.t1 MTR_2g021252 27.701 361 216 14 12 352 50 385 4.21e-22 96.7
MS.gene063474.t1 MTR_1g054725 27.822 381 218 16 6 351 17 375 4.57e-22 96.3
MS.gene063474.t1 MTR_3g036335 27.322 366 211 17 1 339 33 370 5.36e-22 96.7
MS.gene063474.t1 MTR_3g030250 28.421 380 215 19 2 351 27 379 6.07e-22 96.3
MS.gene063474.t1 MTR_4g122860 33.784 222 106 9 148 359 130 320 6.76e-22 95.5
MS.gene063474.t1 MTR_4g122860 49.412 85 38 3 2 84 63 144 1.24e-11 65.5
MS.gene063474.t1 MTR_3g007360 30.295 373 204 20 12 352 55 403 9.41e-22 95.9
MS.gene063474.t1 MTR_7g007300 26.542 373 214 14 9 351 103 445 1.31e-21 95.9
MS.gene063474.t1 MTR_2g426070 30.351 313 168 16 10 284 7 307 1.31e-21 95.5
MS.gene063474.t1 MTR_3g014570 29.894 378 216 17 2 351 22 378 1.47e-21 95.1
MS.gene063474.t1 MTR_3g009310 30.769 299 172 12 6 285 39 321 1.51e-21 95.1
MS.gene063474.t1 MTR_1g115160 26.503 366 227 13 8 351 21 366 1.56e-21 94.7
MS.gene063474.t1 MTR_2g046900 27.822 381 217 18 7 351 26 384 1.98e-21 94.7
MS.gene063474.t1 MTR_4g024890 26.648 364 214 14 2 323 3 355 2.48e-21 94.4
MS.gene063474.t1 MTR_2g021155 29.619 341 203 17 6 324 33 358 2.83e-21 95.9
MS.gene063474.t1 MTR_7g079450 41.549 142 71 5 224 359 2 137 3.06e-21 89.0
MS.gene063474.t1 MTR_1g056710 30.702 228 125 8 8 217 33 245 3.12e-21 94.4
MS.gene063474.t1 MTR_2g426060 29.836 305 171 13 9 278 6 302 4.52e-21 94.0
MS.gene063474.t1 MTR_3g010590 27.394 376 217 16 6 351 36 385 5.46e-21 93.6
MS.gene063474.t1 MTR_3g006570 27.177 379 223 16 6 351 18 376 8.86e-21 92.8
MS.gene063474.t1 MTR_6g053240 27.044 318 198 11 6 301 25 330 1.07e-20 92.8
MS.gene063474.t1 MTR_8g062660 26.221 389 219 17 5 351 18 380 1.35e-20 93.6
MS.gene063474.t1 MTR_5g057020 30.345 290 178 10 9 292 46 317 1.37e-20 92.0
MS.gene063474.t1 MTR_7g066030 25.879 398 226 14 9 352 21 403 1.54e-20 92.4
MS.gene063474.t1 MTR_3g030350 29.712 313 180 15 6 298 32 324 1.55e-20 92.4
MS.gene063474.t1 MTR_5g007610 28.296 311 183 11 1 284 33 330 1.60e-20 92.4
MS.gene063474.t1 MTR_6g027910 25.432 405 217 15 1 351 1 374 1.63e-20 92.0
MS.gene063474.t1 MTR_3g009240 29.352 293 180 9 6 285 33 311 1.65e-20 92.0
MS.gene063474.t1 MTR_1g068875 29.054 296 175 13 9 284 4 284 1.81e-20 92.0
MS.gene063474.t1 MTR_3g013740 29.874 318 172 15 9 292 44 344 1.85e-20 92.4
MS.gene063474.t1 MTR_4g061340 28.947 304 176 11 6 285 23 310 1.86e-20 92.0
MS.gene063474.t1 MTR_2g025420 28.371 356 200 16 9 317 6 353 1.86e-20 92.4
MS.gene063474.t1 MTR_7g407070 30.745 322 163 14 6 285 29 332 2.08e-20 92.0
MS.gene063474.t1 MTR_7g070830 26.847 406 230 16 9 352 21 421 2.38e-20 92.0
MS.gene063474.t1 MTR_5g057690 31.208 298 170 13 9 292 46 322 3.14e-20 91.3
MS.gene063474.t1 MTR_5g096630 25.490 408 235 16 8 356 17 414 3.41e-20 91.7
MS.gene063474.t1 MTR_4g023430 57.647 85 33 2 8 90 40 123 3.63e-20 88.2
MS.gene063474.t1 MTR_4g023430 50.000 82 36 3 283 359 141 222 2.38e-13 68.9
MS.gene063474.t1 MTR_3g013770 30.184 381 210 18 5 351 29 387 4.80e-20 90.9
MS.gene063474.t1 MTR_6g086825 25.553 407 242 16 2 356 63 460 5.03e-20 91.3
MS.gene063474.t1 MTR_3g010520 30.492 305 169 15 2 291 15 291 5.48e-20 90.1
MS.gene063474.t1 MTR_3g010870 28.877 374 215 20 6 351 34 384 5.54e-20 90.5
MS.gene063474.t1 MTR_6g053260 29.283 321 192 14 2 302 330 635 7.83e-20 91.3
MS.gene063474.t1 MTR_4g030830 25.840 387 213 16 1 330 1 370 1.11e-19 89.7
MS.gene063474.t1 MTR_1g112930 26.263 297 181 9 7 285 23 299 1.18e-19 89.7
MS.gene063474.t1 MTR_3g083010 25.341 367 209 13 9 324 6 358 1.19e-19 89.7
MS.gene063474.t1 MTR_4g055820 28.013 307 142 14 1 253 6 287 1.21e-19 89.4
MS.gene063474.t1 MTR_0128s0070 28.205 390 218 18 8 350 21 395 1.23e-19 89.7
MS.gene063474.t1 MTR_5g057710 30.220 364 218 18 9 351 46 394 1.48e-19 89.4
MS.gene063474.t1 MTR_1g068860 28.329 353 212 15 9 336 4 340 1.50e-19 89.4
MS.gene063474.t1 MTR_6g007135 27.660 376 227 15 9 351 26 389 1.68e-19 89.4
MS.gene063474.t1 MTR_4g117550 26.943 386 217 17 8 356 16 373 2.16e-19 88.6
MS.gene063474.t1 MTR_2g021800 25.495 404 236 16 8 352 15 412 2.39e-19 89.0
MS.gene063474.t1 MTR_8g073550 35.749 207 101 9 1 188 22 215 2.56e-19 86.3
MS.gene063474.t1 MTR_6g013270 27.129 317 189 11 3 294 23 322 2.62e-19 88.6
MS.gene063474.t1 MTR_2g426090 27.687 307 177 15 12 284 9 304 3.39e-19 88.6
MS.gene063474.t1 MTR_7g070880 26.034 411 227 17 9 352 21 421 3.50e-19 88.6
MS.gene063474.t1 MTR_7g056760 28.021 389 227 17 9 351 23 404 3.51e-19 88.6
MS.gene063474.t1 MTR_3g023930 28.239 301 169 13 6 291 31 299 5.70e-19 87.4
MS.gene063474.t1 MTR_0064s0160 25.000 324 202 12 3 288 36 356 6.80e-19 87.8
MS.gene063474.t1 MTR_3g006530 26.166 386 225 18 3 351 34 396 7.56e-19 87.4
MS.gene063474.t1 MTR_0760s0010 29.153 295 169 14 14 291 52 323 7.68e-19 87.4
MS.gene063474.t1 MTR_3g007270 26.462 325 196 10 5 301 43 352 8.79e-19 87.4
MS.gene063474.t1 MTR_4g031770 27.097 310 188 10 6 294 1 293 1.03e-18 86.7
MS.gene063474.t1 MTR_2g024100 29.429 350 195 17 8 321 4 337 1.04e-18 87.0
MS.gene063474.t1 MTR_2g021210 28.239 301 185 12 7 294 82 364 1.11e-18 87.0
MS.gene063474.t1 MTR_2g029990 29.006 362 226 18 10 351 52 402 1.12e-18 87.0
MS.gene063474.t1 MTR_7g056390 28.399 331 177 13 12 296 21 337 1.35e-18 86.7
MS.gene063474.t1 MTR_2g021770 25.000 416 242 17 1 357 4 408 1.40e-18 86.7
MS.gene063474.t1 MTR_7g061060 27.795 331 189 13 9 303 13 329 1.43e-18 86.7
MS.gene063474.t1 MTR_6g090180 26.131 398 232 15 8 352 46 434 1.44e-18 87.0
MS.gene063474.t1 MTR_2g028110 28.947 304 172 14 9 284 4 291 1.89e-18 86.3
MS.gene063474.t1 MTR_3g007430 29.966 297 166 14 12 285 46 323 2.01e-18 86.3
MS.gene063474.t1 MTR_3g006500 27.763 389 215 17 1 351 9 369 2.20e-18 85.9
MS.gene063474.t1 MTR_0128s0020 26.923 390 222 17 9 350 18 392 2.98e-18 85.5
MS.gene063474.t1 MTR_2g046830 28.146 302 193 12 7 295 23 313 3.52e-18 85.5
MS.gene063474.t1 MTR_3g010390 27.576 330 160 13 6 285 30 330 3.58e-18 85.5
MS.gene063474.t1 MTR_3g010920 26.543 324 190 16 6 315 41 330 3.71e-18 85.1
MS.gene063474.t1 MTR_0464s0020 26.822 343 192 12 3 296 17 349 4.45e-18 85.5
MS.gene063474.t1 MTR_2g028160 26.446 363 209 14 8 324 4 354 4.86e-18 85.1
MS.gene063474.t1 MTR_2g026010 29.080 337 176 19 6 306 1 310 5.51e-18 84.7
MS.gene063474.t1 MTR_2g031720 25.840 387 232 17 9 359 6 373 6.63e-18 84.7
MS.gene063474.t1 MTR_4g028510 25.831 391 239 15 9 354 16 400 7.21e-18 85.1
MS.gene063474.t1 MTR_1g055375 26.546 388 221 18 6 351 1 366 7.47e-18 84.3
MS.gene063474.t1 MTR_4g070550 26.899 316 182 13 8 284 4 309 1.08e-17 84.0
MS.gene063474.t1 MTR_3g096250 27.778 360 188 14 6 351 44 345 1.11e-17 83.6
MS.gene063474.t1 MTR_5g068040 27.419 310 187 10 9 296 16 309 1.27e-17 83.6
MS.gene063474.t1 MTR_4g014370 24.020 408 239 16 8 354 10 407 1.53e-17 83.6
MS.gene063474.t1 MTR_7g055870 28.132 423 213 21 9 351 13 424 1.58e-17 83.6
MS.gene063474.t1 MTR_7g067680 30.795 302 165 15 6 292 46 318 1.59e-17 83.6
MS.gene063474.t1 MTR_3g024110 28.065 310 180 14 2 292 94 379 2.08e-17 83.6
MS.gene063474.t1 MTR_2g104340 25.248 404 239 14 2 356 7 396 2.54e-17 82.8
MS.gene063474.t1 MTR_5g069390 24.878 410 230 16 8 356 25 417 2.93e-17 83.2
MS.gene063474.t1 MTR_6g021880 27.473 364 219 16 20 351 31 381 3.05e-17 82.4
MS.gene063474.t1 MTR_3g010970 25.469 373 213 17 12 351 51 391 3.41e-17 82.4
MS.gene063474.t1 MTR_3g096280 26.829 369 187 16 22 351 18 342 3.52e-17 82.0
MS.gene063474.t1 MTR_3g010620 28.146 302 173 13 6 291 33 306 3.63e-17 82.4
MS.gene063474.t1 MTR_8g046310 25.000 384 241 17 3 355 10 377 4.84e-17 82.0
MS.gene063474.t1 MTR_3g011100 28.165 387 220 17 6 351 232 601 4.84e-17 82.8
MS.gene063474.t1 MTR_2g461450 27.119 354 206 16 9 330 18 351 5.29e-17 81.6
MS.gene063474.t1 MTR_4g129190 26.849 365 208 16 9 323 6 361 5.57e-17 82.0
MS.gene063474.t1 MTR_3g436150 29.969 327 171 15 6 294 29 335 6.95e-17 81.6
MS.gene063474.t1 MTR_5g046300 26.730 318 177 13 6 296 1 289 7.56e-17 81.3
MS.gene063474.t1 MTR_5g046290 26.730 318 177 13 6 296 1 289 7.56e-17 81.3
MS.gene063474.t1 MTR_3g011060 28.221 326 181 15 1 292 20 326 9.94e-17 81.3
MS.gene063474.t1 MTR_7g077970 29.052 327 176 13 6 285 4 321 9.96e-17 81.3
MS.gene063474.t1 MTR_2g031640 29.605 304 166 19 9 284 6 289 1.01e-16 80.9
MS.gene063474.t1 MTR_2g047892 24.936 389 232 17 9 351 22 396 1.03e-16 81.3
MS.gene063474.t1 MTR_1g055145 55.294 85 36 2 23 106 47 130 1.19e-16 79.7
MS.gene063474.t1 MTR_7g017130 23.426 397 240 14 9 357 18 398 1.19e-16 80.9
MS.gene063474.t1 MTR_3g030240 25.914 301 180 13 6 291 37 309 1.29e-16 80.5
MS.gene063474.t1 MTR_2g425980 28.754 313 175 14 9 284 5 306 1.29e-16 80.9
MS.gene063474.t1 MTR_2g022000 26.121 379 207 13 8 323 15 383 1.43e-16 80.9
MS.gene063474.t1 MTR_3g023940 26.823 384 212 17 6 351 31 383 1.54e-16 80.5
MS.gene063474.t1 MTR_7g066100 27.228 404 234 15 1 353 1 395 1.63e-16 80.5
MS.gene063474.t1 MTR_0097s0030 27.742 310 172 12 9 284 14 305 1.69e-16 80.5
MS.gene063474.t1 MTR_2g047240 27.742 310 172 12 9 284 14 305 1.69e-16 80.5
MS.gene063474.t1 MTR_3g011120 24.217 351 214 10 8 323 13 346 1.71e-16 80.1
MS.gene063474.t1 MTR_3g024150 28.267 375 207 22 12 351 38 385 1.91e-16 80.1
MS.gene063474.t1 MTR_3g007300 28.767 292 156 11 6 285 46 297 2.04e-16 80.1
MS.gene063474.t1 MTR_8g099460 27.213 305 179 14 9 284 5 295 2.09e-16 80.1
MS.gene063474.t1 MTR_2g021050 28.571 294 173 11 9 284 5 279 2.29e-16 80.1
MS.gene063474.t1 MTR_5g069760 26.629 353 204 15 9 323 6 341 2.41e-16 79.7
MS.gene063474.t1 MTR_7g056003 29.641 334 163 15 12 296 18 328 2.79e-16 79.7
MS.gene063474.t1 MTR_3g030330 26.197 355 223 15 3 345 14 341 3.47e-16 79.3
MS.gene063474.t1 MTR_5g097680 22.551 439 239 18 1 357 9 428 3.62e-16 79.7
MS.gene063474.t1 MTR_2g078850 28.049 328 186 16 12 315 33 334 4.05e-16 79.0
MS.gene063474.t1 MTR_5g008530 69.492 59 15 2 8 66 17 72 4.14e-16 72.8
MS.gene063474.t1 MTR_3g011650 33.929 224 122 11 6 218 76 284 4.40e-16 78.2
MS.gene063474.t1 MTR_5g057643 33.484 221 128 8 9 218 46 258 4.45e-16 77.8
MS.gene063474.t1 MTR_6g014720 27.010 311 182 13 3 294 20 304 4.58e-16 79.0
MS.gene063474.t1 MTR_5g056020 26.209 393 218 15 4 330 12 398 5.24e-16 79.3
MS.gene063474.t1 MTR_6g055210 27.778 324 185 13 2 285 15 329 5.62e-16 79.3
MS.gene063474.t1 MTR_7g060960 28.808 302 152 12 9 286 32 294 5.69e-16 78.6
MS.gene063474.t1 MTR_1g007410 26.113 337 168 16 8 285 21 335 6.13e-16 79.0
MS.gene063474.t1 MTR_3g024040 28.904 301 172 15 16 300 38 312 6.26e-16 78.6
MS.gene063474.t1 MTR_1g115185 26.752 314 192 12 3 294 33 330 6.76e-16 78.6
MS.gene063474.t1 MTR_1g054575 26.910 301 194 10 7 295 50 336 8.07e-16 79.3
MS.gene063474.t1 MTR_7g445890 24.365 394 220 17 9 351 16 382 1.02e-15 78.2
MS.gene063474.t1 MTR_3g009250 33.636 220 127 9 6 218 38 245 1.25e-15 75.9
MS.gene063474.t1 MTR_7g017170 23.864 352 205 13 9 313 18 353 1.56e-15 77.8
MS.gene063474.t1 MTR_7g060940 33.333 222 117 12 9 217 22 225 1.59e-15 77.4
MS.gene063474.t1 MTR_6g461660 26.269 335 183 15 8 292 18 338 1.70e-15 77.4
MS.gene063474.t1 MTR_7g078860 27.301 326 184 13 1 285 1 314 1.83e-15 77.4
MS.gene063474.t1 MTR_5g069930 27.298 359 203 19 8 323 5 348 2.27e-15 77.0
MS.gene063474.t1 MTR_3g058480 29.670 273 138 12 2 242 32 282 2.27e-15 76.6
MS.gene063474.t1 MTR_7g035295 24.181 397 208 14 12 351 19 379 2.38e-15 77.0
MS.gene063474.t1 MTR_7g056820 26.630 368 214 16 4 330 2 354 2.59e-15 76.6
MS.gene063474.t1 MTR_2g031680 25.926 297 183 12 9 284 6 286 2.95e-15 76.6
MS.gene063474.t1 MTR_3g011020 28.205 312 172 12 6 293 25 308 2.96e-15 76.6
MS.gene063474.t1 MTR_5g048160 26.103 272 161 10 6 242 1 267 3.17e-15 76.6
MS.gene063474.t1 MTR_7g062100 26.718 393 218 16 9 351 24 396 3.20e-15 76.6
MS.gene063474.t1 MTR_1g055055 26.897 290 161 11 9 274 26 288 3.30e-15 76.3
MS.gene063474.t1 MTR_7g057270 27.356 329 188 14 9 296 26 344 4.79e-15 76.3
MS.gene063474.t1 MTR_5g023570 40.678 118 60 5 1 114 26 137 5.45e-15 72.0
MS.gene063474.t1 MTR_7g055977 29.260 311 169 14 9 285 7 300 5.55e-15 75.9
MS.gene063474.t1 MTR_1g068905 28.807 243 139 10 9 242 4 221 5.83e-15 75.1
MS.gene063474.t1 MTR_7g061090 23.367 398 244 14 5 351 18 405 7.95e-15 75.5
MS.gene063474.t1 MTR_6g048120 26.718 393 221 16 7 351 34 407 8.66e-15 75.5
MS.gene063474.t1 MTR_4g013180 26.979 341 202 14 9 308 11 345 9.77e-15 75.5
MS.gene063474.t1 MTR_2g025960 29.572 257 138 14 101 318 1 253 9.79e-15 74.3
MS.gene063474.t1 MTR_4g033495 24.627 402 226 15 9 354 27 407 9.87e-15 75.5
MS.gene063474.t1 MTR_0054s0090 24.146 410 227 17 8 354 16 404 1.01e-14 75.1
MS.gene063474.t1 MTR_1g007450 25.915 355 215 12 9 321 12 360 1.04e-14 75.1
MS.gene063474.t1 MTR_0649s0020 25.570 395 237 17 3 351 4 387 1.06e-14 75.1
MS.gene063474.t1 MTR_7g055987 27.679 336 176 17 12 306 23 332 1.38e-14 74.7
MS.gene063474.t1 MTR_7g066850 26.113 337 191 15 9 304 23 342 1.46e-14 75.1
MS.gene063474.t1 MTR_2g021950 24.103 390 246 16 5 352 12 393 1.65e-14 74.3
MS.gene063474.t1 MTR_5g094350 25.735 272 145 11 12 242 16 271 1.96e-14 73.2
MS.gene063474.t1 MTR_3g030320 27.197 239 153 10 73 303 17 242 1.97e-14 73.6
MS.gene063474.t1 MTR_5g022090 26.899 316 178 15 8 302 33 316 2.37e-14 73.9
MS.gene063474.t1 MTR_7g050480 27.476 313 168 13 9 285 22 311 2.59e-14 73.9
MS.gene063474.t1 MTR_7g050520 26.752 314 171 13 9 286 22 312 2.62e-14 73.9
MS.gene063474.t1 MTR_7g028660 26.140 329 183 12 9 296 11 320 3.56e-14 73.6
MS.gene063474.t1 MTR_7g061050 25.926 324 193 11 9 300 13 321 3.82e-14 73.2
MS.gene063474.t1 MTR_2g043410 29.412 323 173 13 4 285 17 325 3.91e-14 73.6
MS.gene063474.t1 MTR_4g037465 26.158 367 223 14 3 330 15 372 4.58e-14 73.2
MS.gene063474.t1 MTR_6g048140 28.391 317 176 14 5 292 35 329 5.33e-14 73.2
MS.gene063474.t1 MTR_8g013005 55.932 59 25 1 302 359 1 59 6.69e-14 66.2
MS.gene063474.t1 MTR_5g022850 24.543 383 213 13 8 357 15 354 8.36e-14 72.0
MS.gene063474.t1 MTR_0129s0070 24.365 394 244 17 8 358 16 398 9.51e-14 72.4
MS.gene063474.t1 MTR_3g058470 33.641 217 99 11 4 189 32 234 1.06e-13 72.0
MS.gene063474.t1 MTR_4g028680 24.250 400 234 17 8 354 15 398 1.13e-13 72.0
MS.gene063474.t1 MTR_2g031700 29.237 236 138 12 9 231 6 225 1.23e-13 70.9
MS.gene063474.t1 MTR_8g012090 25.141 354 190 17 8 323 15 331 1.30e-13 71.2
MS.gene063474.t1 MTR_1g055200 53.968 63 25 1 104 166 5 63 1.45e-13 66.6
MS.gene063474.t1 MTR_0242s0060 27.381 336 198 12 1 296 1 330 1.51e-13 71.6
MS.gene063474.t1 MTR_0242s0040 27.381 336 198 12 1 296 1 330 1.51e-13 71.6
MS.gene063474.t1 MTR_7g066840 26.752 314 178 17 9 285 23 321 1.74e-13 71.6
MS.gene063474.t1 MTR_5g097330 25.248 404 232 16 8 356 15 403 2.08e-13 71.2
MS.gene063474.t1 MTR_7g078840 27.003 337 178 14 9 285 10 338 2.57e-13 71.2
MS.gene063474.t1 MTR_0115s0020 22.670 397 251 16 5 352 6 395 3.25e-13 70.5
MS.gene063474.t1 MTR_7g091630 24.922 321 181 12 9 284 32 337 3.77e-13 70.5
MS.gene063474.t1 MTR_1g071010 24.365 394 241 17 1 351 7 386 3.95e-13 70.5
MS.gene063474.t1 MTR_8g063440 22.078 385 244 14 8 352 11 379 4.93e-13 70.1
MS.gene063474.t1 MTR_5g096900 28.571 266 151 9 8 242 11 268 5.40e-13 69.3
MS.gene063474.t1 MTR_6g016285 24.146 410 231 15 9 351 21 417 5.79e-13 70.1
MS.gene063474.t1 MTR_5g092850 24.874 398 224 18 12 352 19 398 7.68e-13 69.7
MS.gene063474.t1 MTR_4g130330 24.814 403 240 20 1 354 1 389 7.75e-13 69.3
MS.gene063474.t1 MTR_3g464500 24.857 350 207 12 9 314 27 364 1.05e-12 68.9
MS.gene063474.t1 MTR_7g056170 24.292 424 209 16 5 351 71 459 1.06e-12 69.3
MS.gene063474.t1 MTR_3g058440 29.528 254 131 13 6 231 32 265 1.40e-12 68.2
MS.gene063474.t1 MTR_8g064890 24.103 390 233 15 12 357 19 389 1.84e-12 68.2
MS.gene063474.t1 MTR_0054s0100 23.659 410 231 17 8 354 16 406 2.08e-12 68.2
MS.gene063474.t1 MTR_0267s0050 25.401 374 218 15 5 330 2 362 2.42e-12 67.8
MS.gene063474.t1 MTR_6g478230 23.485 396 244 18 8 357 26 408 2.67e-12 67.8
MS.gene063474.t1 MTR_5g057040 33.158 190 112 7 9 188 46 230 3.03e-12 68.6
MS.gene063474.t1 MTR_8g063350 21.765 340 213 11 9 330 14 318 3.80e-12 67.0
MS.gene063474.t1 MTR_7g079640 26.415 318 169 15 8 285 12 304 4.67e-12 67.0
MS.gene063474.t1 MTR_5g064700 24.671 304 168 14 105 356 74 368 4.98e-12 67.0
MS.gene063474.t1 MTR_4g028660 24.747 396 232 18 8 352 15 395 5.02e-12 67.0
MS.gene063474.t1 MTR_4g027450 24.747 396 232 18 8 352 15 395 5.02e-12 67.0
MS.gene063474.t1 MTR_8g066440 23.773 387 249 15 7 352 21 402 5.87e-12 67.0
MS.gene063474.t1 MTR_3g083660 32.895 152 80 6 148 292 76 212 6.22e-12 65.9
MS.gene063474.t1 MTR_4g019990 26.103 272 161 10 9 254 6 263 1.39e-11 65.5
MS.gene063474.t1 MTR_5g097350 22.826 368 242 12 18 352 25 383 1.65e-11 65.5
MS.gene063474.t1 MTR_1g061330 25.594 379 235 16 9 359 4 363 2.28e-11 65.1
MS.gene063474.t1 MTR_7g056503 24.084 382 246 16 9 351 21 397 3.13e-11 64.7
MS.gene063474.t1 MTR_6g034830 36.667 120 63 2 1 120 12 118 3.69e-11 60.5
MS.gene063474.t1 MTR_7g078040 27.966 354 186 15 1 296 1 343 3.86e-11 64.3
MS.gene063474.t1 MTR_4g030760 27.551 196 114 8 9 188 73 256 3.88e-11 64.3
MS.gene063474.t1 MTR_2g047878 24.185 368 229 12 9 351 21 363 5.05e-11 63.9
MS.gene063474.t1 MTR_7g056260 26.349 315 188 14 3 285 8 310 5.06e-11 63.5
MS.gene063474.t1 MTR_4g080200 26.848 257 150 9 9 247 3 239 6.75e-11 63.2
MS.gene063474.t1 MTR_5g083940 28.302 212 104 10 6 216 1 165 6.86e-11 63.2
MS.gene063474.t1 MTR_4g028750 24.586 362 221 14 2 320 9 361 7.34e-11 63.5
MS.gene063474.t1 MTR_2g006360 27.645 293 160 16 12 297 49 296 7.43e-11 63.2
MS.gene063474.t1 MTR_3g013950 23.562 365 224 12 12 330 9 364 8.87e-11 63.2
MS.gene063474.t1 MTR_6g065510 26.336 262 161 9 119 352 74 331 9.23e-11 62.8
MS.gene063474.t1 MTR_4g011660 23.952 334 202 12 9 295 19 347 9.42e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063474.t1 AT3G06240 27.621 391 228 12 9 351 36 419 5.53e-29 116
MS.gene063474.t1 AT3G23880 30.769 312 189 15 7 302 11 311 1.35e-26 108
MS.gene063474.t1 AT4G12560 28.889 315 176 15 6 287 1 300 1.39e-18 86.7
MS.gene063474.t1 AT4G12560 28.889 315 176 15 6 287 1 300 1.39e-18 86.7
MS.gene063474.t1 AT4G12560 28.889 315 176 15 6 287 1 300 1.39e-18 86.7
MS.gene063474.t1 AT1G33530 29.653 317 180 15 2 302 90 379 3.41e-18 85.9
MS.gene063474.t1 AT3G21120 24.606 317 205 14 8 303 2 305 1.64e-17 83.2
MS.gene063474.t1 AT3G16210 28.049 246 137 10 9 242 5 222 4.03e-16 79.0
MS.gene063474.t1 AT4G22390 27.036 307 196 13 6 291 1 300 4.27e-16 79.3
MS.gene063474.t1 AT4G22390 27.036 307 196 13 6 291 1 300 4.88e-16 79.3
MS.gene063474.t1 AT2G43445 22.193 383 229 14 2 353 6 350 8.65e-16 78.6
MS.gene063474.t1 AT2G40925 26.537 309 179 14 8 286 26 316 6.26e-15 75.9
MS.gene063474.t1 AT5G49610 29.289 239 122 11 1 215 1 216 2.03e-14 73.9
MS.gene063474.t1 AT3G10430 27.236 246 137 12 9 236 5 226 5.77e-13 69.7
MS.gene063474.t1 AT4G19940 27.778 306 166 13 6 276 32 317 1.41e-12 68.9
MS.gene063474.t1 AT5G62510 26.621 293 180 13 7 276 42 322 1.90e-12 68.6
MS.gene063474.t1 AT3G08750 27.559 254 145 12 6 245 9 237 3.16e-12 67.4
MS.gene063474.t1 AT3G17490 24.706 340 207 14 6 314 3 324 5.84e-12 67.0
MS.gene063474.t1 AT1G12870 24.573 293 186 14 9 276 33 315 7.94e-12 66.6
MS.gene063474.t1 AT3G19410 23.590 390 240 14 5 358 2 369 8.00e-12 66.2
MS.gene063474.t1 AT1G11270 25.965 285 178 13 9 275 35 304 9.14e-12 65.9
MS.gene063474.t1 AT1G11270 25.965 285 178 13 9 275 35 304 9.14e-12 65.9
MS.gene063474.t1 AT4G04690 26.800 250 142 14 9 241 11 236 9.70e-12 66.2
MS.gene063474.t1 AT3G16590 26.693 251 149 11 8 239 4 238 1.04e-11 65.9
MS.gene063474.t1 AT5G62660 25.338 296 181 10 7 276 39 320 1.35e-11 65.9
MS.gene063474.t1 AT1G12170 29.054 296 157 18 9 276 6 276 3.86e-11 64.3
MS.gene063474.t1 AT1G30790 25.987 304 187 12 1 276 1 294 4.18e-11 64.3
MS.gene063474.t1 AT3G20710 25.000 252 169 10 6 250 3 241 5.77e-11 63.5

Find 74 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGAATATTTCTATGGTTT+TGG 0.184892 8.4:+18246039 MS.gene063474:CDS
TATTCAGATCTTGAAATTAA+AGG 0.189024 8.4:+18245898 MS.gene063474:CDS
AAAGCTGGGTTGTTCTTTAA+TGG 0.210542 8.4:+18246213 MS.gene063474:CDS
GATTCTGGTTTGTGGGTATT+TGG 0.239819 8.4:+18246357 MS.gene063474:CDS
AAACATGAACCTTACGATTC+TGG 0.242156 8.4:+18246342 MS.gene063474:CDS
TGGGTATTTGGAGAATTTCT+TGG 0.272087 8.4:+18246369 MS.gene063474:CDS
CCGGTGACCTTAGTAGGATT+TGG 0.292066 8.4:-18245651 None:intergenic
GGTTCATGTTTAAGCTTATA+TGG 0.295734 8.4:-18246330 None:intergenic
AAGCTGGGTTGTTCTTTAAT+GGG 0.303358 8.4:+18246214 MS.gene063474:CDS
CTCGTCAACAGATGATTATT+TGG 0.303514 8.4:+18246068 MS.gene063474:CDS
AAGGAATGTGAATATTTCTA+TGG 0.304244 8.4:+18246033 MS.gene063474:CDS
GAGTCTCTGCTTTCACTTCC+CGG 0.311578 8.4:+18246645 MS.gene063474:CDS
ATCGTGGTGCAGCTGAAATA+TGG 0.311591 8.4:+18246403 MS.gene063474:CDS
TAATACATGGAAACAAATTC+AGG 0.328938 8.4:+18246149 MS.gene063474:CDS
AGGTCCATATGATTCGTTAT+AGG 0.333106 8.4:-18246604 None:intergenic
TTGGAGAATTTCTTGGTTTG+TGG 0.336914 8.4:+18246376 MS.gene063474:CDS
TCTTTAATGGGGCTATTCAT+TGG 0.349624 8.4:+18246226 MS.gene063474:CDS
TGGAGAATTTCTTGGTTTGT+GGG 0.354642 8.4:+18246377 MS.gene063474:CDS
ATTAAAGAACAACCCAGCTT+TGG 0.366565 8.4:-18246211 None:intergenic
TTATACTTCACCAATCTGTT+AGG 0.384638 8.4:-18246552 None:intergenic
TCTGTATACACGGCCACTTC+AGG 0.389246 8.4:-18246624 None:intergenic
TTAAAGAACAACCCAGCTTT+GGG 0.389953 8.4:-18246210 None:intergenic
ACTTCACCGGTGACCTTAGT+AGG 0.396149 8.4:-18245657 None:intergenic
ACCTTACGATTCTGGTTTGT+GGG 0.398636 8.4:+18246350 MS.gene063474:CDS
TCAAATCCGTTTGTAAGTCT+TGG 0.415643 8.4:+18245692 MS.gene063474:CDS
TGCAGAGCATAAAGGAGAAA+AGG 0.417056 8.4:-18246499 None:intergenic
ATTAGCAAAGTGGGAATCAT+TGG 0.418936 8.4:-18245728 None:intergenic
TAATGGGGCTATTCATTGGT+TGG 0.427301 8.4:+18246230 MS.gene063474:CDS
TCTGAACATGAGCCCAAAGC+TGG 0.430995 8.4:+18246198 MS.gene063474:CDS
AACCTTACGATTCTGGTTTG+TGG 0.435471 8.4:+18246349 MS.gene063474:CDS
TCATCTTCATACATGTCTCT+TGG 0.436970 8.4:+18246107 MS.gene063474:CDS
CGCTCCTATAACGAATCATA+TGG 0.447526 8.4:+18246600 MS.gene063474:CDS
TTATCTGAATCACACTCAAC+AGG 0.455140 8.4:-18246012 None:intergenic
TTAAGCTTGTTGATTGTCAC+CGG 0.464950 8.4:-18246664 None:intergenic
GCAGAGCATAAAGGAGAAAA+GGG 0.474610 8.4:-18246498 None:intergenic
TTTCCTTTCAATTAAATCAA+AGG 0.474723 8.4:-18246289 None:intergenic
AGATCTGAATAAGAACCTAT+AGG 0.488438 8.4:-18245886 None:intergenic
TGTTTAAGCTTATATGGCAC+AGG 0.490002 8.4:-18246324 None:intergenic
TATACAAAGTGCATAAGTCT+TGG 0.491874 8.4:+18246436 MS.gene063474:CDS
GAAAATGTGAATTAGCAAAG+TGG 0.503455 8.4:-18245738 None:intergenic
TGATCATCCAAATCCTACTA+AGG 0.508287 8.4:+18245644 MS.gene063474:CDS
GGGTGTTGAATGCCATCAAA+AGG 0.508697 8.4:-18246477 None:intergenic
AAAATGTGAATTAGCAAAGT+GGG 0.509421 8.4:-18245737 None:intergenic
TTGATATGAGCAAAACTCTA+CGG 0.515326 8.4:-18245783 None:intergenic
TTGCCTTTGATTTAATTGAA+AGG 0.515684 8.4:+18246286 MS.gene063474:CDS
AAATTAAAGGTTCGTGTAGA+GGG 0.524995 8.4:+18245911 MS.gene063474:CDS
GTCAACAGATGATTATTTGG+TGG 0.525175 8.4:+18246071 MS.gene063474:CDS
AACTCTACGGGTGTGTGTTG+CGG 0.533131 8.4:-18245770 None:intergenic
TCTCATTGAGAACTAATACA+TGG 0.535970 8.4:+18246136 MS.gene063474:CDS
AACAGATGATCCTAACAGAT+TGG 0.540285 8.4:+18246542 MS.gene063474:CDS
GAAATTAAAGGTTCGTGTAG+AGG 0.542135 8.4:+18245910 MS.gene063474:CDS
AGCTGGGTTGTTCTTTAATG+GGG 0.543964 8.4:+18246215 MS.gene063474:CDS
TGATATGAGCAAAACTCTAC+GGG 0.546554 8.4:-18245782 None:intergenic
TCGTGGTGCAGCTGAAATAT+GGG 0.550093 8.4:+18246404 MS.gene063474:CDS
AATACATGGAAACAAATTCA+GGG 0.551639 8.4:+18246150 MS.gene063474:CDS
AGATTGGTGAAGTATAATCA+TGG 0.563280 8.4:+18246558 MS.gene063474:CDS
TGTTGAGTGTGATTCAGATA+AGG 0.567413 8.4:+18246014 MS.gene063474:CDS
ATCAATTCATGAGGCAGATG+CGG 0.573527 8.4:-18245625 None:intergenic
AGAAAACCAAGACTTACAAA+CGG 0.574732 8.4:-18245698 None:intergenic
CGAATCATATGGACCTGAAG+TGG 0.577896 8.4:+18246611 MS.gene063474:CDS
CTGAACATGAGCCCAAAGCT+GGG 0.581867 8.4:+18246199 MS.gene063474:CDS
CCAAATCCTACTAAGGTCAC+CGG 0.589229 8.4:+18245651 MS.gene063474:CDS
ACCCACAAACCAGAATCGTA+AGG 0.614833 8.4:-18246351 None:intergenic
AAACGTACAAGAGACTTCAC+CGG 0.618682 8.4:-18245670 None:intergenic
TCACACTCAACAGGAGACAA+AGG 0.625999 8.4:-18246003 None:intergenic
TCTACGGGTGTGTGTTGCGG+CGG 0.636793 8.4:-18245767 None:intergenic
GAGACATGTATGAAGATGAA+CGG 0.643604 8.4:-18246103 None:intergenic
AAGCAGAGACTCTGTATACA+CGG 0.652046 8.4:-18246634 None:intergenic
TAAGCTTGTTGATTGTCACC+GGG 0.663785 8.4:-18246663 None:intergenic
ATTTGGATGATCAATTCATG+AGG 0.666883 8.4:-18245634 None:intergenic
CTTGGTTTGTGGGCTCATCG+TGG 0.695842 8.4:+18246387 MS.gene063474:CDS
GCAGATGCATACATGCAATG+AGG 0.696847 8.4:-18246174 None:intergenic
CAGAGCATAAAGGAGAAAAG+GGG 0.698195 8.4:-18246497 None:intergenic
TTGGTGAAGTATAATCATGG+AGG 0.729522 8.4:+18246561 MS.gene063474:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTCAGATCTTGAAATTAA+AGG + chr8.4:18245898-18245917 MS.gene063474:CDS 20.0%
!! TTTCCTTTCAATTAAATCAA+AGG - chr8.4:18246292-18246311 None:intergenic 20.0%
!!! GCAAAAAAAGGTATTATTAT+TGG + chr8.4:18246519-18246538 MS.gene063474:CDS 20.0%
!!! GTTCTTTAAGCTTTTATATA+TGG + chr8.4:18245950-18245969 MS.gene063474:CDS 20.0%
!!! TATTTTTTTATGAAATGCAG+TGG - chr8.4:18245983-18246002 None:intergenic 20.0%
! AAAATGTGAATTAGCAAAGT+GGG - chr8.4:18245740-18245759 None:intergenic 25.0%
! AATACATGGAAACAAATTCA+GGG + chr8.4:18246150-18246169 MS.gene063474:CDS 25.0%
! TAATACATGGAAACAAATTC+AGG + chr8.4:18246149-18246168 MS.gene063474:CDS 25.0%
!! AAGGAATGTGAATATTTCTA+TGG + chr8.4:18246033-18246052 MS.gene063474:CDS 25.0%
!! TTGCCTTTGATTTAATTGAA+AGG + chr8.4:18246286-18246305 MS.gene063474:CDS 25.0%
!!! GATTTTGATTTTCTACCTAT+AGG + chr8.4:18245871-18245890 MS.gene063474:CDS 25.0%
!!! GTGAATATTTCTATGGTTTT+GGG + chr8.4:18246040-18246059 MS.gene063474:CDS 25.0%
!!! TGTGAATATTTCTATGGTTT+TGG + chr8.4:18246039-18246058 MS.gene063474:CDS 25.0%
AAATTAAAGGTTCGTGTAGA+GGG + chr8.4:18245911-18245930 MS.gene063474:CDS 30.0%
AGAAAACCAAGACTTACAAA+CGG - chr8.4:18245701-18245720 None:intergenic 30.0%
AGATCTGAATAAGAACCTAT+AGG - chr8.4:18245889-18245908 None:intergenic 30.0%
AGATTGGTGAAGTATAATCA+TGG + chr8.4:18246558-18246577 MS.gene063474:CDS 30.0%
ATTTGGATGATCAATTCATG+AGG - chr8.4:18245637-18245656 None:intergenic 30.0%
GAAAATGTGAATTAGCAAAG+TGG - chr8.4:18245741-18245760 None:intergenic 30.0%
GGTTCATGTTTAAGCTTATA+TGG - chr8.4:18246333-18246352 None:intergenic 30.0%
TATACAAAGTGCATAAGTCT+TGG + chr8.4:18246436-18246455 MS.gene063474:CDS 30.0%
TCTCATTGAGAACTAATACA+TGG + chr8.4:18246136-18246155 MS.gene063474:CDS 30.0%
TTATACTTCACCAATCTGTT+AGG - chr8.4:18246555-18246574 None:intergenic 30.0%
TTGATATGAGCAAAACTCTA+CGG - chr8.4:18245786-18245805 None:intergenic 30.0%
! ACTCATGTTTTTCCTTTTGA+TGG + chr8.4:18246465-18246484 MS.gene063474:CDS 30.0%
! TTTTATGAAATGCAGTGGAT+GGG - chr8.4:18245978-18245997 None:intergenic 30.0%
! TTTTTATGAAATGCAGTGGA+TGG - chr8.4:18245979-18245998 None:intergenic 30.0%
!!! TTTTCGTCTTGATTTGCTAA+AGG + chr8.4:18246254-18246273 MS.gene063474:CDS 30.0%
AAACATGAACCTTACGATTC+TGG + chr8.4:18246342-18246361 MS.gene063474:CDS 35.0%
AAAGCTGGGTTGTTCTTTAA+TGG + chr8.4:18246213-18246232 MS.gene063474:CDS 35.0%
AACAGATGATCCTAACAGAT+TGG + chr8.4:18246542-18246561 MS.gene063474:CDS 35.0%
AAGCTGGGTTGTTCTTTAAT+GGG + chr8.4:18246214-18246233 MS.gene063474:CDS 35.0%
AGGTCCATATGATTCGTTAT+AGG - chr8.4:18246607-18246626 None:intergenic 35.0%
ATTAAAGAACAACCCAGCTT+TGG - chr8.4:18246214-18246233 None:intergenic 35.0%
ATTAGCAAAGTGGGAATCAT+TGG - chr8.4:18245731-18245750 None:intergenic 35.0%
CCTTTATGCTCTGCAAAAAA+AGG + chr8.4:18246507-18246526 MS.gene063474:CDS 35.0%
CTCGTCAACAGATGATTATT+TGG + chr8.4:18246068-18246087 MS.gene063474:CDS 35.0%
GAAATTAAAGGTTCGTGTAG+AGG + chr8.4:18245910-18245929 MS.gene063474:CDS 35.0%
GAGACATGTATGAAGATGAA+CGG - chr8.4:18246106-18246125 None:intergenic 35.0%
GTCAACAGATGATTATTTGG+TGG + chr8.4:18246071-18246090 MS.gene063474:CDS 35.0%
TCAAATCCGTTTGTAAGTCT+TGG + chr8.4:18245692-18245711 MS.gene063474:CDS 35.0%
TCATCTTCATACATGTCTCT+TGG + chr8.4:18246107-18246126 MS.gene063474:CDS 35.0%
TCTTTAATGGGGCTATTCAT+TGG + chr8.4:18246226-18246245 MS.gene063474:CDS 35.0%
TGATATGAGCAAAACTCTAC+GGG - chr8.4:18245785-18245804 None:intergenic 35.0%
TGATCATCCAAATCCTACTA+AGG + chr8.4:18245644-18245663 MS.gene063474:CDS 35.0%
TGGGTATTTGGAGAATTTCT+TGG + chr8.4:18246369-18246388 MS.gene063474:CDS 35.0%
TGTTGAGTGTGATTCAGATA+AGG + chr8.4:18246014-18246033 MS.gene063474:CDS 35.0%
TGTTTAAGCTTATATGGCAC+AGG - chr8.4:18246327-18246346 None:intergenic 35.0%
TTAAAGAACAACCCAGCTTT+GGG - chr8.4:18246213-18246232 None:intergenic 35.0%
TTATCTGAATCACACTCAAC+AGG - chr8.4:18246015-18246034 None:intergenic 35.0%
TTGGTGAAGTATAATCATGG+AGG + chr8.4:18246561-18246580 MS.gene063474:CDS 35.0%
! TTGGAGAATTTCTTGGTTTG+TGG + chr8.4:18246376-18246395 MS.gene063474:CDS 35.0%
!! TGGAGAATTTCTTGGTTTGT+GGG + chr8.4:18246377-18246396 MS.gene063474:CDS 35.0%
!! TTAAGCTTGTTGATTGTCAC+CGG - chr8.4:18246667-18246686 None:intergenic 35.0%
!!! CCTTTTTTTGCAGAGCATAA+AGG - chr8.4:18246510-18246529 None:intergenic 35.0%
AAACGTACAAGAGACTTCAC+CGG - chr8.4:18245673-18245692 None:intergenic 40.0%
AAGCAGAGACTCTGTATACA+CGG - chr8.4:18246637-18246656 None:intergenic 40.0%
AGCTGGGTTGTTCTTTAATG+GGG + chr8.4:18246215-18246234 MS.gene063474:CDS 40.0%
ATCAATTCATGAGGCAGATG+CGG - chr8.4:18245628-18245647 None:intergenic 40.0%
CAGAGCATAAAGGAGAAAAG+GGG - chr8.4:18246500-18246519 None:intergenic 40.0%
CGCTCCTATAACGAATCATA+TGG + chr8.4:18246600-18246619 MS.gene063474:CDS 40.0%
GCAGAGCATAAAGGAGAAAA+GGG - chr8.4:18246501-18246520 None:intergenic 40.0%
TAATGGGGCTATTCATTGGT+TGG + chr8.4:18246230-18246249 MS.gene063474:CDS 40.0%
TGCAGAGCATAAAGGAGAAA+AGG - chr8.4:18246502-18246521 None:intergenic 40.0%
!! AACCTTACGATTCTGGTTTG+TGG + chr8.4:18246349-18246368 MS.gene063474:CDS 40.0%
!! ACCTTACGATTCTGGTTTGT+GGG + chr8.4:18246350-18246369 MS.gene063474:CDS 40.0%
!! GATTCTGGTTTGTGGGTATT+TGG + chr8.4:18246357-18246376 MS.gene063474:CDS 40.0%
!! TAAGCTTGTTGATTGTCACC+GGG - chr8.4:18246666-18246685 None:intergenic 40.0%
ACCCACAAACCAGAATCGTA+AGG - chr8.4:18246354-18246373 None:intergenic 45.0%
ATCGTGGTGCAGCTGAAATA+TGG + chr8.4:18246403-18246422 MS.gene063474:CDS 45.0%
CCAAATCCTACTAAGGTCAC+CGG + chr8.4:18245651-18245670 MS.gene063474:CDS 45.0%
CGAATCATATGGACCTGAAG+TGG + chr8.4:18246611-18246630 MS.gene063474:CDS 45.0%
GCAGATGCATACATGCAATG+AGG - chr8.4:18246177-18246196 None:intergenic 45.0%
TCACACTCAACAGGAGACAA+AGG - chr8.4:18246006-18246025 None:intergenic 45.0%
TCGTGGTGCAGCTGAAATAT+GGG + chr8.4:18246404-18246423 MS.gene063474:CDS 45.0%
!! GGGTGTTGAATGCCATCAAA+AGG - chr8.4:18246480-18246499 None:intergenic 45.0%
AACTCTACGGGTGTGTGTTG+CGG - chr8.4:18245773-18245792 None:intergenic 50.0%
ACTTCACCGGTGACCTTAGT+AGG - chr8.4:18245660-18245679 None:intergenic 50.0%
CCGGTGACCTTAGTAGGATT+TGG - chr8.4:18245654-18245673 None:intergenic 50.0%
CTGAACATGAGCCCAAAGCT+GGG + chr8.4:18246199-18246218 MS.gene063474:CDS 50.0%
GAGTCTCTGCTTTCACTTCC+CGG + chr8.4:18246645-18246664 MS.gene063474:CDS 50.0%
TCTGAACATGAGCCCAAAGC+TGG + chr8.4:18246198-18246217 MS.gene063474:CDS 50.0%
TCTGTATACACGGCCACTTC+AGG - chr8.4:18246627-18246646 None:intergenic 50.0%
!! CTTGGTTTGTGGGCTCATCG+TGG + chr8.4:18246387-18246406 MS.gene063474:CDS 55.0%
TCTACGGGTGTGTGTTGCGG+CGG - chr8.4:18245770-18245789 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 18245607 18246686 18245607 ID=MS.gene063474
chr8.4 mRNA 18245607 18246686 18245607 ID=MS.gene063474.t1;Parent=MS.gene063474
chr8.4 exon 18245607 18246686 18245607 ID=MS.gene063474.t1.exon1;Parent=MS.gene063474.t1
chr8.4 CDS 18245607 18246686 18245607 ID=cds.MS.gene063474.t1;Parent=MS.gene063474.t1
Gene Sequence

>MS.gene063474

ATGGAGACGACGACGCTGCCGCATCTGCCTCATGAATTGATCATCCAAATCCTACTAAGGTCACCGGTGAAGTCTCTTGTACGTTTCAAATCCGTTTGTAAGTCTTGGTTTTCTCTTATCTCCAATGATTCCCACTTTGCTAATTCACATTTTCAACTTTCCGCCGCAACACACACCCGTAGAGTTTTGCTCATATCAACTTCAGCTTTTGAATCTATAGATTTAGAAGCATCGCTTCATGACGATTCTGCTTTTGCTTCACTAGATTTTGATTTTCTACCTATAGGTTCTTATTCAGATCTTGAAATTAAAGGTTCGTGTAGAGGGTTTATACTTTTGCACTGTTCTTTAAGCTTTTATATATGGAACCCATCCACTGCATTTCATAAAAAAATACCTTTGTCTCCTGTTGAGTGTGATTCAGATAAGGAATGTGAATATTTCTATGGTTTTGGGTATGACTCGTCAACAGATGATTATTTGGTGGTTTCAATGTCCGTTCATCTTCATACATGTCTCTTGGAGATTTTCTCATTGAGAACTAATACATGGAAACAAATTCAGGGTCCTCATTGCATGTATGCATCTGCTTCTGAACATGAGCCCAAAGCTGGGTTGTTCTTTAATGGGGCTATTCATTGGTTGGCTTTTCGTCTTGATTTGCTAAAGGATGTTATTGTTGCCTTTGATTTAATTGAAAGGAAATTTTTTTGTATGCCTGTGCCATATAAGCTTAAACATGAACCTTACGATTCTGGTTTGTGGGTATTTGGAGAATTTCTTGGTTTGTGGGCTCATCGTGGTGCAGCTGAAATATGGGTGATGAAAGTATACAAAGTGCATAAGTCTTGGACAAACACTCATGTTTTTCCTTTTGATGGCATTCAACACCCCTTTTCTCCTTTATGCTCTGCAAAAAAAGGTATTATTATTGGAACAGATGATCCTAACAGATTGGTGAAGTATAATCATGGAGGAAAGTTGTTAGAGTGTCGCTCCTATAACGAATCATATGGACCTGAAGTGGCCGTGTATACAGAGTCTCTGCTTTCACTTCCCGGTGACAATCAACAAGCTTAA

Protein sequence

>MS.gene063474.t1

METTTLPHLPHELIIQILLRSPVKSLVRFKSVCKSWFSLISNDSHFANSHFQLSAATHTRRVLLISTSAFESIDLEASLHDDSAFASLDFDFLPIGSYSDLEIKGSCRGFILLHCSLSFYIWNPSTAFHKKIPLSPVECDSDKECEYFYGFGYDSSTDDYLVVSMSVHLHTCLLEIFSLRTNTWKQIQGPHCMYASASEHEPKAGLFFNGAIHWLAFRLDLLKDVIVAFDLIERKFFCMPVPYKLKHEPYDSGLWVFGEFLGLWAHRGAAEIWVMKVYKVHKSWTNTHVFPFDGIQHPFSPLCSAKKGIIIGTDDPNRLVKYNHGGKLLECRSYNESYGPEVAVYTESLLSLPGDNQQA