AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50326

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50326.t1 MTR_4g023120 90.541 370 35 0 1 370 1 370 0.0 703
MS.gene50326.t1 MTR_4g023070 91.057 369 33 0 1 369 1 369 0.0 699
MS.gene50326.t1 MTR_4g023090 63.564 376 124 5 3 370 16 386 1.25e-164 466
MS.gene50326.t1 MTR_4g023080 65.489 368 103 4 3 369 9 353 9.85e-164 462
MS.gene50326.t1 MTR_4g021785 64.324 370 107 4 3 370 9 355 2.61e-163 461
MS.gene50326.t1 MTR_4g023380 61.364 396 93 7 3 370 16 379 2.20e-149 427
MS.gene50326.t1 MTR_4g023130 58.696 368 87 5 3 369 9 312 3.13e-136 391
MS.gene50326.t1 MTR_4g023200 57.746 355 127 5 17 368 24 358 1.27e-132 384
MS.gene50326.t1 MTR_4g023150 58.266 369 131 5 3 368 10 358 2.73e-132 382
MS.gene50326.t1 MTR_4g023190 57.995 369 131 6 3 368 10 357 8.10e-130 376
MS.gene50326.t1 MTR_4g023440 55.946 370 106 6 3 370 18 332 8.90e-127 367
MS.gene50326.t1 MTR_3g103020 55.381 381 135 12 3 370 20 378 6.14e-125 365
MS.gene50326.t1 MTR_4g094365 51.989 377 152 7 3 370 8 364 5.91e-118 346
MS.gene50326.t1 MTR_4g109280 52.941 374 148 9 3 370 8 359 1.10e-115 340
MS.gene50326.t1 MTR_3g034130 54.396 364 132 10 3 350 9 354 1.04e-113 336
MS.gene50326.t1 MTR_3g034180 52.219 383 152 10 3 370 123 489 1.92e-113 339
MS.gene50326.t1 MTR_4g109270 52.094 382 148 10 1 370 6 364 4.48e-112 331
MS.gene50326.t1 MTR_3g034160 52.618 382 146 11 3 367 9 372 2.67e-111 330
MS.gene50326.t1 MTR_4g116330 51.715 379 145 11 3 367 23 377 4.89e-111 329
MS.gene50326.t1 MTR_4g117850 51.194 377 149 12 3 367 23 376 5.68e-108 321
MS.gene50326.t1 MTR_4g117780 49.474 380 159 10 2 370 10 367 4.64e-107 319
MS.gene50326.t1 MTR_8g433040 50.000 378 148 9 3 370 18 364 5.98e-104 311
MS.gene50326.t1 MTR_8g032380 50.000 378 148 9 3 370 18 364 5.98e-104 311
MS.gene50326.t1 MTR_4g117770 49.868 379 157 9 3 370 11 367 1.50e-103 310
MS.gene50326.t1 MTR_4g117810 49.868 379 157 9 3 370 11 367 1.50e-103 310
MS.gene50326.t1 MTR_4g122850 52.547 373 141 15 14 370 12 364 1.64e-103 310
MS.gene50326.t1 MTR_1g055135 48.953 382 162 11 3 370 13 375 2.54e-101 304
MS.gene50326.t1 MTR_6g060650 49.610 385 156 11 3 369 8 372 3.64e-101 304
MS.gene50326.t1 MTR_8g032390 50.267 374 132 13 3 365 40 370 1.06e-97 295
MS.gene50326.t1 MTR_5g097210 49.465 374 156 13 3 366 9 359 2.14e-97 294
MS.gene50326.t1 MTR_5g070088 44.416 394 174 8 3 368 7 383 2.77e-94 287
MS.gene50326.t1 MTR_4g117720 47.258 383 130 13 1 367 49 375 3.23e-94 286
MS.gene50326.t1 MTR_5g070080 47.118 399 151 13 3 367 10 382 3.59e-94 286
MS.gene50326.t1 MTR_5g070130 46.719 381 170 10 3 367 11 374 1.58e-93 285
MS.gene50326.t1 MTR_4g118380 48.238 369 146 9 3 345 8 357 7.10e-92 280
MS.gene50326.t1 MTR_4g116330 46.174 379 127 11 3 367 23 338 4.67e-89 272
MS.gene50326.t1 MTR_8g433030 46.757 370 118 11 3 365 40 337 6.35e-86 264
MS.gene50326.t1 MTR_4g117750 47.632 380 160 12 1 366 1 355 3.46e-83 261
MS.gene50326.t1 MTR_4g117750 52.893 121 43 2 250 368 373 481 3.03e-27 112
MS.gene50326.t1 MTR_4g121580 45.953 383 146 16 3 369 11 348 7.57e-83 258
MS.gene50326.t1 MTR_4g117870 47.573 309 106 10 67 370 10 267 4.62e-77 238
MS.gene50326.t1 MTR_1g055165 41.953 379 139 12 3 370 10 318 6.62e-77 240
MS.gene50326.t1 MTR_8g013010 49.624 266 119 7 1 259 52 309 1.97e-74 233
MS.gene50326.t1 MTR_1g055195 40.000 335 158 9 47 367 170 475 3.66e-63 209
MS.gene50326.t1 MTR_7g079370 41.193 352 169 13 32 363 16 349 7.52e-61 200
MS.gene50326.t1 MTR_4g116320 51.948 231 86 6 144 367 43 255 8.86e-61 196
MS.gene50326.t1 MTR_4g118400 44.043 277 107 8 91 363 61 293 9.14e-61 197
MS.gene50326.t1 MTR_6g463430 54.634 205 72 4 170 370 15 202 1.00e-59 192
MS.gene50326.t1 MTR_2g048580 37.366 372 178 16 3 363 8 335 6.56e-58 192
MS.gene50326.t1 MTR_7g079400 41.946 298 139 11 87 370 60 337 1.58e-56 188
MS.gene50326.t1 MTR_8g040935 50.952 210 82 5 169 370 12 208 1.18e-55 181
MS.gene50326.t1 MTR_4g118370 40.860 279 121 10 96 367 16 257 1.81e-53 177
MS.gene50326.t1 MTR_4g116340 46.352 233 93 7 3 224 36 247 1.24e-51 172
MS.gene50326.t1 MTR_8g102520 36.243 378 168 15 3 370 8 322 1.69e-49 169
MS.gene50326.t1 MTR_4g114700 40.074 272 88 7 101 360 9 217 2.53e-44 153
MS.gene50326.t1 MTR_1g055250 40.650 246 114 9 136 370 46 270 9.45e-42 149
MS.gene50326.t1 MTR_4g117530 42.060 233 81 6 139 370 74 253 2.19e-41 146
MS.gene50326.t1 MTR_1g055175 43.379 219 93 8 163 369 1 200 5.84e-41 143
MS.gene50326.t1 MTR_7g117720 46.970 198 73 6 3 191 10 184 8.36e-41 145
MS.gene50326.t1 MTR_7g117720 47.541 122 45 4 248 363 162 270 2.95e-20 89.7
MS.gene50326.t1 MTR_1g097490 30.081 369 222 12 3 362 49 390 1.03e-36 137
MS.gene50326.t1 MTR_1g094210 29.223 373 220 13 3 362 57 398 1.69e-36 137
MS.gene50326.t1 MTR_1g094210 28.977 352 207 12 3 342 57 377 2.13e-36 137
MS.gene50326.t1 MTR_4g117430 49.669 151 61 6 112 259 14 152 1.34e-35 127
MS.gene50326.t1 MTR_1g097560 28.610 374 217 15 3 362 36 373 5.55e-33 127
MS.gene50326.t1 MTR_4g107820 28.421 380 224 14 2 362 35 385 5.60e-33 127
MS.gene50326.t1 MTR_4g107780 28.421 380 224 14 2 362 35 385 5.60e-33 127
MS.gene50326.t1 MTR_1g097330 31.773 299 179 9 3 291 16 299 5.91e-33 127
MS.gene50326.t1 MTR_4g107820 28.421 380 224 14 2 362 35 385 1.01e-32 127
MS.gene50326.t1 MTR_4g107780 28.421 380 224 14 2 362 35 385 1.24e-32 126
MS.gene50326.t1 MTR_7g079420 34.507 284 126 12 100 368 905 1143 9.87e-32 127
MS.gene50326.t1 MTR_4g108820 32.203 295 146 12 3 290 42 289 5.16e-31 120
MS.gene50326.t1 MTR_2g046920 30.723 332 197 13 3 316 24 340 5.43e-31 121
MS.gene50326.t1 MTR_2g021150 29.341 334 204 14 3 323 14 328 5.55e-31 121
MS.gene50326.t1 MTR_2g047832 28.775 351 201 14 3 323 29 360 6.79e-31 122
MS.gene50326.t1 MTR_8g467140 30.693 303 183 12 3 292 32 320 4.72e-30 118
MS.gene50326.t1 MTR_4g023430 69.512 82 25 0 3 84 41 122 7.20e-30 114
MS.gene50326.t1 MTR_4g023430 62.366 93 18 2 283 370 142 222 9.59e-28 108
MS.gene50326.t1 MTR_5g022420 29.107 347 200 18 3 335 27 341 2.58e-29 117
MS.gene50326.t1 MTR_2g055970 28.267 375 229 14 3 362 211 560 2.94e-29 119
MS.gene50326.t1 MTR_3g009310 28.418 373 230 13 3 362 42 390 8.06e-29 115
MS.gene50326.t1 MTR_8g101580 26.685 371 242 11 2 362 44 394 1.28e-28 115
MS.gene50326.t1 MTR_4g122860 39.320 206 72 9 176 370 157 320 1.19e-27 111
MS.gene50326.t1 MTR_4g122860 50.000 74 33 3 3 75 70 140 4.15e-11 63.9
MS.gene50326.t1 MTR_4g055060 30.573 314 189 13 3 299 30 331 1.51e-27 112
MS.gene50326.t1 MTR_5g023000 54.128 109 36 2 263 369 2 98 1.62e-27 104
MS.gene50326.t1 MTR_5g057790 31.935 310 181 15 3 299 46 338 5.71e-27 110
MS.gene50326.t1 MTR_4g061340 28.286 350 197 15 3 320 26 353 1.32e-26 109
MS.gene50326.t1 MTR_2g046830 28.529 333 205 13 3 323 25 336 1.86e-26 109
MS.gene50326.t1 MTR_4g118360 51.200 125 41 4 247 367 15 123 3.06e-26 102
MS.gene50326.t1 MTR_3g023930 26.984 378 214 14 3 362 34 367 4.14e-26 107
MS.gene50326.t1 MTR_7g062100 29.208 404 215 16 3 364 24 398 6.51e-26 107
MS.gene50326.t1 MTR_2g046900 28.655 342 201 15 3 323 28 347 6.61e-26 107
MS.gene50326.t1 MTR_4g133170 28.701 331 191 13 2 309 3 311 6.76e-26 107
MS.gene50326.t1 MTR_5g057710 31.269 323 186 15 3 312 46 345 7.76e-26 107
MS.gene50326.t1 MTR_3g014540 30.052 386 213 21 3 365 29 380 7.94e-26 107
MS.gene50326.t1 MTR_2g021155 29.073 313 200 12 6 306 39 341 4.68e-25 107
MS.gene50326.t1 MTR_3g013740 29.765 383 226 19 3 362 44 406 5.21e-25 105
MS.gene50326.t1 MTR_7g070830 27.838 370 203 14 3 323 21 375 8.76e-25 105
MS.gene50326.t1 MTR_8g098830 39.326 178 83 8 171 341 35 194 1.02e-24 101
MS.gene50326.t1 MTR_5g057690 31.392 309 174 15 3 299 46 328 1.15e-24 103
MS.gene50326.t1 MTR_7g070440 29.412 323 174 13 5 294 9 310 1.22e-24 103
MS.gene50326.t1 MTR_3g007360 30.809 383 206 23 6 363 55 403 5.50e-24 102
MS.gene50326.t1 MTR_5g069120 41.772 158 79 5 13 159 1 156 5.72e-24 97.8
MS.gene50326.t1 MTR_3g036290 28.342 374 215 17 3 362 22 356 7.80e-24 101
MS.gene50326.t1 MTR_6g065980 26.260 377 227 15 3 362 16 358 8.33e-24 101
MS.gene50326.t1 MTR_7g057270 28.255 361 203 16 3 323 26 370 1.75e-23 101
MS.gene50326.t1 MTR_4g030830 26.050 357 212 12 3 323 9 349 1.88e-23 100
MS.gene50326.t1 MTR_2g461450 28.571 294 179 11 3 285 18 291 2.38e-23 100
MS.gene50326.t1 MTR_7g070880 27.027 370 206 14 3 323 21 375 2.39e-23 100
MS.gene50326.t1 MTR_2g028130 27.434 339 202 13 2 305 4 333 2.45e-23 100
MS.gene50326.t1 MTR_2g021050 25.926 378 227 14 2 366 4 341 2.56e-23 100
MS.gene50326.t1 MTR_1g050542 24.595 370 246 15 3 362 58 404 3.07e-23 100
MS.gene50326.t1 MTR_6g021880 27.597 308 199 8 14 304 31 331 3.53e-23 99.8
MS.gene50326.t1 MTR_4g013180 27.824 363 193 13 4 323 12 348 4.31e-23 100
MS.gene50326.t1 MTR_3g010430 26.700 397 214 16 3 362 36 392 4.58e-23 100
MS.gene50326.t1 MTR_0667s0010 28.743 334 192 15 3 305 6 324 5.53e-23 99.8
MS.gene50326.t1 MTR_3g014570 27.907 387 221 18 3 365 29 381 5.69e-23 99.4
MS.gene50326.t1 MTR_1g068875 28.615 325 192 11 2 305 3 308 7.91e-23 99.0
MS.gene50326.t1 MTR_3g036430 25.600 375 212 13 3 362 20 342 8.47e-23 98.2
MS.gene50326.t1 MTR_3g010920 27.034 381 214 16 3 362 44 381 9.17e-23 98.6
MS.gene50326.t1 MTR_3g007410 29.688 384 209 22 6 363 55 403 9.24e-23 99.0
MS.gene50326.t1 MTR_3g007330 27.401 354 207 14 3 337 48 370 1.02e-22 98.6
MS.gene50326.t1 MTR_3g006570 26.371 383 232 14 3 362 21 376 1.17e-22 98.6
MS.gene50326.t1 MTR_2g046800 28.947 342 179 17 3 299 14 336 2.01e-22 97.8
MS.gene50326.t1 MTR_7g079450 39.744 156 72 6 218 370 1 137 2.03e-22 92.0
MS.gene50326.t1 MTR_4g109290 40.994 161 61 7 3 159 9 139 2.19e-22 93.6
MS.gene50326.t1 MTR_4g109290 64.151 53 17 1 320 370 136 188 2.21e-11 62.8
MS.gene50326.t1 MTR_3g030240 26.121 379 220 14 3 362 40 377 2.32e-22 97.4
MS.gene50326.t1 MTR_2g104340 24.940 417 231 15 3 369 14 398 2.87e-22 97.4
MS.gene50326.t1 MTR_3g013770 26.873 387 230 14 3 365 33 390 3.10e-22 97.4
MS.gene50326.t1 MTR_5g057020 30.164 305 178 14 3 299 46 323 5.17e-22 95.9
MS.gene50326.t1 MTR_1g054575 26.994 326 212 15 3 316 52 363 7.21e-22 97.8
MS.gene50326.t1 MTR_2g021190 27.540 374 235 15 3 362 21 372 8.83e-22 95.9
MS.gene50326.t1 MTR_6g027910 27.273 385 230 16 6 362 12 374 9.28e-22 95.9
MS.gene50326.t1 MTR_0044s0300 24.869 382 235 13 3 362 38 389 9.40e-22 95.9
MS.gene50326.t1 MTR_7g061060 27.358 318 176 12 3 285 13 310 1.19e-21 95.9
MS.gene50326.t1 MTR_3g010520 28.302 318 180 13 3 306 25 308 1.23e-21 95.1
MS.gene50326.t1 MTR_2g028140 28.286 350 191 15 2 305 4 339 1.44e-21 95.5
MS.gene50326.t1 MTR_2g078900 28.013 307 177 15 3 290 33 314 1.50e-21 94.7
MS.gene50326.t1 MTR_1g068835 26.629 353 221 11 2 339 3 332 1.51e-21 95.1
MS.gene50326.t1 MTR_4g129190 28.649 370 189 19 1 323 4 345 1.54e-21 95.5
MS.gene50326.t1 MTR_2g426070 28.443 334 198 12 4 305 7 331 1.82e-21 95.1
MS.gene50326.t1 MTR_2g426090 27.463 335 191 10 6 304 9 327 2.17e-21 95.1
MS.gene50326.t1 MTR_2g426020 25.255 392 238 10 3 361 6 375 2.24e-21 95.1
MS.gene50326.t1 MTR_2g028160 26.822 343 203 13 2 306 4 336 2.27e-21 95.1
MS.gene50326.t1 MTR_3g011060 27.041 392 219 15 3 361 28 385 4.65e-21 94.0
MS.gene50326.t1 MTR_4g024890 24.722 360 232 13 4 337 11 357 5.86e-21 93.6
MS.gene50326.t1 MTR_2g024110 27.019 322 204 11 2 305 3 311 5.87e-21 93.6
MS.gene50326.t1 MTR_7g056760 26.126 333 210 9 3 299 23 355 7.74e-21 93.6
MS.gene50326.t1 MTR_3g006500 25.255 392 222 16 3 362 17 369 8.21e-21 92.8
MS.gene50326.t1 MTR_5g008530 71.667 60 15 1 1 60 16 73 9.07e-21 85.5
MS.gene50326.t1 MTR_3g006670 31.068 309 162 16 3 285 49 332 9.81e-21 93.2
MS.gene50326.t1 MTR_3g010590 25.266 376 236 14 3 362 39 385 1.03e-20 92.8
MS.gene50326.t1 MTR_4g031770 26.159 302 194 11 3 290 4 290 1.49e-20 92.0
MS.gene50326.t1 MTR_6g034720 49.495 99 48 2 138 235 72 169 2.00e-20 89.0
MS.gene50326.t1 MTR_3g083010 28.070 342 199 15 3 305 6 339 3.09e-20 91.7
MS.gene50326.t1 MTR_4g023100 46.087 115 55 2 262 370 6 119 4.28e-20 85.1
MS.gene50326.t1 MTR_7g407070 28.101 395 221 21 3 362 32 398 5.61e-20 90.9
MS.gene50326.t1 MTR_7g066000 28.065 310 190 14 3 285 25 328 6.43e-20 90.9
MS.gene50326.t1 MTR_3g083640 26.357 387 219 17 3 362 55 402 6.67e-20 90.9
MS.gene50326.t1 MTR_3g024110 28.664 307 183 13 3 296 101 384 7.31e-20 90.9
MS.gene50326.t1 MTR_3g010870 26.893 383 222 17 3 362 37 384 7.94e-20 90.1
MS.gene50326.t1 MTR_1g068860 27.302 315 184 13 1 291 2 295 9.31e-20 90.1
MS.gene50326.t1 MTR_3g010620 25.723 311 181 13 1 293 31 309 9.59e-20 90.1
MS.gene50326.t1 MTR_3g024150 26.893 383 219 16 6 362 38 385 1.38e-19 89.7
MS.gene50326.t1 MTR_2g031720 25.455 385 253 10 3 370 6 373 1.55e-19 89.7
MS.gene50326.t1 MTR_3g036335 25.641 390 224 17 3 362 41 394 1.58e-19 89.4
MS.gene50326.t1 MTR_3g009240 28.522 291 186 8 3 285 36 312 1.94e-19 89.4
MS.gene50326.t1 MTR_1g088120 25.205 365 210 12 6 325 13 359 2.24e-19 89.4
MS.gene50326.t1 MTR_2g425980 26.566 399 227 16 2 361 4 375 2.38e-19 89.4
MS.gene50326.t1 MTR_2g025420 26.857 350 194 16 3 305 6 340 2.52e-19 89.4
MS.gene50326.t1 MTR_2g029990 27.559 381 224 18 4 362 52 402 2.58e-19 89.0
MS.gene50326.t1 MTR_3g023940 25.964 389 220 15 3 362 34 383 2.59e-19 89.0
MS.gene50326.t1 MTR_2g024100 26.727 333 189 12 10 305 14 328 2.61e-19 89.0
MS.gene50326.t1 MTR_6g053240 27.619 315 182 13 2 290 27 321 2.85e-19 89.0
MS.gene50326.t1 MTR_4g019990 26.761 355 210 13 3 323 6 344 2.96e-19 88.6
MS.gene50326.t1 MTR_4g030760 27.035 344 198 16 3 323 73 386 2.98e-19 89.0
MS.gene50326.t1 MTR_3g010390 26.154 325 194 13 3 296 33 342 3.04e-19 88.6
MS.gene50326.t1 MTR_2g426060 28.571 336 196 14 3 305 6 330 3.59e-19 88.6
MS.gene50326.t1 MTR_5g096710 27.500 400 230 19 3 364 23 400 3.68e-19 88.6
MS.gene50326.t1 MTR_5g011200 28.115 313 177 15 3 290 17 306 3.83e-19 88.2
MS.gene50326.t1 MTR_2g028110 24.235 392 233 12 2 364 3 359 3.87e-19 88.2
MS.gene50326.t1 MTR_7g445890 25.743 404 223 16 3 364 16 384 4.58e-19 88.2
MS.gene50326.t1 MTR_4g070550 27.523 327 175 14 2 285 4 311 5.38e-19 88.2
MS.gene50326.t1 MTR_0128s0020 27.654 405 217 20 3 361 18 392 6.81e-19 87.8
MS.gene50326.t1 MTR_1g442850 27.247 356 195 15 5 323 7 335 6.89e-19 87.4
MS.gene50326.t1 MTR_6g016285 24.757 412 254 14 3 366 21 424 7.16e-19 87.8
MS.gene50326.t1 MTR_7g052670 26.064 376 208 13 3 323 21 381 7.83e-19 87.8
MS.gene50326.t1 MTR_0760s0010 26.738 374 219 15 8 362 52 389 8.60e-19 87.4
MS.gene50326.t1 MTR_5g056020 26.150 413 243 17 3 362 17 420 8.79e-19 88.2
MS.gene50326.t1 MTR_7g066100 27.044 318 190 13 3 285 11 321 9.75e-19 87.0
MS.gene50326.t1 MTR_2g031640 27.950 322 199 10 3 305 6 313 1.16e-18 87.0
MS.gene50326.t1 MTR_6g004660 29.703 303 185 12 3 285 16 310 1.22e-18 86.7
MS.gene50326.t1 MTR_3g072470 27.820 399 192 19 3 343 19 379 1.38e-18 87.0
MS.gene50326.t1 MTR_3g011100 27.366 391 229 17 3 362 235 601 1.54e-18 87.4
MS.gene50326.t1 MTR_5g027370 24.516 310 200 10 2 285 28 329 1.70e-18 87.0
MS.gene50326.t1 MTR_2g437110 24.922 321 185 9 3 287 22 322 1.75e-18 87.0
MS.gene50326.t1 MTR_8g099460 27.564 312 190 12 1 289 3 301 1.87e-18 86.7
MS.gene50326.t1 MTR_6g017280 25.321 312 196 11 3 287 9 310 2.21e-18 86.3
MS.gene50326.t1 MTR_6g055210 26.455 378 224 13 3 335 22 390 2.27e-18 86.7
MS.gene50326.t1 MTR_5g027330 24.516 310 200 10 2 285 39 340 2.27e-18 86.7
MS.gene50326.t1 MTR_7g017130 26.480 321 198 13 2 289 17 332 2.53e-18 85.9
MS.gene50326.t1 MTR_7g017170 26.480 321 198 13 2 289 17 332 2.54e-18 86.3
MS.gene50326.t1 MTR_7g066840 26.629 353 205 14 3 323 23 353 2.68e-18 85.9
MS.gene50326.t1 MTR_7g066850 24.010 404 247 14 3 365 23 407 3.27e-18 86.3
MS.gene50326.t1 MTR_7g050520 26.781 351 200 17 3 323 22 345 3.42e-18 85.5
MS.gene50326.t1 MTR_6g007135 26.410 390 231 15 3 362 26 389 3.43e-18 85.5
MS.gene50326.t1 MTR_1g055070 28.519 270 147 14 2 238 48 304 3.67e-18 85.5
MS.gene50326.t1 MTR_2g021252 28.846 312 183 15 6 303 50 336 3.86e-18 85.5
MS.gene50326.t1 MTR_2g021770 27.073 410 234 16 6 367 15 407 3.97e-18 85.5
MS.gene50326.t1 MTR_7g055930 26.852 432 228 20 3 364 13 426 4.00e-18 85.5
MS.gene50326.t1 MTR_4g129160 26.230 366 206 14 3 320 7 356 4.41e-18 85.1
MS.gene50326.t1 MTR_1g115160 27.187 320 195 15 1 306 20 315 4.76e-18 85.1
MS.gene50326.t1 MTR_3g009260 27.891 294 181 11 3 285 41 314 5.18e-18 85.1
MS.gene50326.t1 MTR_7g078860 25.989 354 220 11 3 323 9 353 5.50e-18 85.1
MS.gene50326.t1 MTR_3g030330 24.935 385 231 15 3 362 20 371 5.91e-18 84.7
MS.gene50326.t1 MTR_0649s0020 27.295 403 224 17 3 362 11 387 5.93e-18 84.7
MS.gene50326.t1 MTR_5g046300 25.581 301 181 11 3 285 4 279 6.55e-18 84.3
MS.gene50326.t1 MTR_5g046290 25.581 301 181 11 3 285 4 279 6.55e-18 84.3
MS.gene50326.t1 MTR_3g007430 28.239 301 181 13 6 289 46 328 6.58e-18 84.7
MS.gene50326.t1 MTR_3g010970 26.804 388 206 18 6 362 51 391 6.91e-18 84.7
MS.gene50326.t1 MTR_5g069760 28.150 373 195 20 3 337 6 343 7.01e-18 84.3
MS.gene50326.t1 MTR_3g436150 28.385 384 228 19 3 362 32 392 7.89e-18 84.7
MS.gene50326.t1 MTR_7g028660 26.269 335 202 11 3 306 11 331 8.66e-18 84.3
MS.gene50326.t1 MTR_7g060960 28.022 364 173 16 3 335 32 337 9.52e-18 84.0
MS.gene50326.t1 MTR_7g050480 26.781 351 200 17 3 323 22 345 1.41e-17 84.0
MS.gene50326.t1 MTR_3g030350 27.692 390 218 19 3 362 35 390 1.54e-17 83.6
MS.gene50326.t1 MTR_7g056290 28.182 330 174 15 3 287 22 333 1.63e-17 84.0
MS.gene50326.t1 MTR_7g007300 25.743 303 184 11 3 290 103 379 1.65e-17 84.0
MS.gene50326.t1 MTR_7g055870 25.747 435 229 18 3 364 13 426 1.65e-17 84.0
MS.gene50326.t1 MTR_7g062060 25.307 407 240 17 3 363 12 400 1.72e-17 83.6
MS.gene50326.t1 MTR_5g069930 26.741 359 195 16 3 323 6 334 2.09e-17 83.2
MS.gene50326.t1 MTR_7g061050 24.465 327 197 9 3 298 13 320 2.36e-17 83.2
MS.gene50326.t1 MTR_2g025960 29.046 241 126 12 98 305 5 233 2.37e-17 82.0
MS.gene50326.t1 MTR_2g047892 24.675 385 210 16 3 341 22 372 2.48e-17 83.2
MS.gene50326.t1 MTR_8g062660 24.619 394 228 15 3 362 22 380 2.69e-17 84.0
MS.gene50326.t1 MTR_3g464470 25.130 386 234 15 3 349 7 376 2.75e-17 82.8
MS.gene50326.t1 MTR_4g030090 24.860 358 216 13 4 323 15 357 4.58e-17 82.4
MS.gene50326.t1 MTR_7g056003 29.938 324 164 15 6 287 18 320 5.67e-17 82.0
MS.gene50326.t1 MTR_6g053260 27.184 309 186 13 2 290 336 625 5.75e-17 82.8
MS.gene50326.t1 MTR_5g046260 23.611 288 173 8 3 285 4 249 6.05e-17 80.9
MS.gene50326.t1 MTR_7g066030 24.257 404 242 13 3 363 21 403 6.52e-17 82.0
MS.gene50326.t1 MTR_3g007270 25.786 318 196 12 3 295 47 349 6.68e-17 82.0
MS.gene50326.t1 MTR_1g061330 23.980 392 238 15 3 368 4 361 6.88e-17 81.6
MS.gene50326.t1 MTR_5g097350 23.698 384 236 13 12 363 25 383 8.50e-17 81.3
MS.gene50326.t1 MTR_7g078900 25.381 394 238 15 6 357 15 394 9.71e-17 81.6
MS.gene50326.t1 MTR_5g068040 27.358 318 166 12 3 287 16 301 9.71e-17 81.3
MS.gene50326.t1 MTR_7g066080 25.980 408 249 18 3 364 16 416 1.03e-16 81.6
MS.gene50326.t1 MTR_5g086590 30.846 201 124 8 107 298 9 203 1.04e-16 79.0
MS.gene50326.t1 MTR_7g061090 25.073 343 195 12 3 300 22 347 1.06e-16 81.3
MS.gene50326.t1 MTR_8g013005 63.793 58 19 1 314 369 1 58 1.15e-16 73.9
MS.gene50326.t1 MTR_4g030980 26.453 344 187 11 3 287 15 351 1.18e-16 81.3
MS.gene50326.t1 MTR_2g021800 23.245 413 249 13 3 363 16 412 1.36e-16 80.9
MS.gene50326.t1 MTR_7g056797 24.745 392 251 12 3 362 23 402 1.61e-16 80.9
MS.gene50326.t1 MTR_7g022600 26.016 369 216 15 1 323 21 378 1.86e-16 80.5
MS.gene50326.t1 MTR_2g031680 25.926 324 200 11 3 305 6 310 2.29e-16 80.1
MS.gene50326.t1 MTR_5g007610 27.653 311 186 12 3 289 41 336 2.32e-16 80.1
MS.gene50326.t1 MTR_0115s0020 23.810 399 259 16 2 365 9 397 2.81e-16 80.1
MS.gene50326.t1 MTR_7g016930 24.510 306 193 12 3 286 16 305 2.86e-16 79.3
MS.gene50326.t1 MTR_7g013590 26.943 386 227 18 6 365 39 395 3.05e-16 79.7
MS.gene50326.t1 MTR_7g055987 27.273 308 176 14 6 287 23 308 3.86e-16 79.3
MS.gene50326.t1 MTR_7g056390 28.267 329 175 15 3 287 18 329 3.93e-16 79.7
MS.gene50326.t1 MTR_8g064890 25.641 312 189 13 6 285 19 319 4.72e-16 79.3
MS.gene50326.t1 MTR_2g078850 26.836 354 207 16 6 337 33 356 5.65e-16 79.0
MS.gene50326.t1 MTR_3g464500 26.136 352 210 13 3 323 27 359 6.89e-16 79.0
MS.gene50326.t1 MTR_1g055145 47.191 89 44 2 13 99 43 130 7.12e-16 77.4
MS.gene50326.t1 MTR_7g035295 24.920 313 172 7 3 285 16 295 8.15e-16 78.6
MS.gene50326.t1 MTR_7g077070 25.062 403 236 16 3 349 16 408 9.07e-16 78.6
MS.gene50326.t1 MTR_7g060940 26.543 324 175 11 3 287 22 321 9.35e-16 78.6
MS.gene50326.t1 MTR_8g073550 32.020 203 111 8 3 190 30 220 1.09e-15 76.3
MS.gene50326.t1 MTR_7g056200 26.332 319 165 9 3 287 23 305 1.10e-15 78.2
MS.gene50326.t1 MTR_8g039500 24.667 300 206 9 3 285 12 308 1.19e-15 77.8
MS.gene50326.t1 MTR_0831s0010 25.478 314 200 10 3 289 50 356 1.25e-15 78.2
MS.gene50326.t1 MTR_7g055977 26.316 361 197 16 3 323 7 338 1.30e-15 77.8
MS.gene50326.t1 MTR_6g017270 28.856 201 119 6 3 185 9 203 1.37e-15 77.4
MS.gene50326.t1 MTR_2g047878 25.393 382 224 15 3 362 21 363 1.39e-15 77.8
MS.gene50326.t1 MTR_4g033495 25.767 326 189 12 3 292 27 335 1.47e-15 78.2
MS.gene50326.t1 MTR_3g437520 25.416 421 230 17 3 354 23 428 1.48e-15 78.2
MS.gene50326.t1 MTR_4g028510 23.573 403 250 14 3 365 16 400 1.63e-15 78.2
MS.gene50326.t1 MTR_5g057643 30.841 214 130 8 3 206 46 251 1.74e-15 76.3
MS.gene50326.t1 MTR_7g079640 25.714 385 225 17 3 358 13 365 1.86e-15 77.4
MS.gene50326.t1 MTR_3g024040 25.939 293 196 9 10 298 38 313 2.21e-15 77.0
MS.gene50326.t1 MTR_3g058470 24.860 358 181 17 2 330 36 334 2.30e-15 77.0
MS.gene50326.t1 MTR_0064s0160 24.668 377 233 16 3 334 42 412 2.73e-15 77.4
MS.gene50326.t1 MTR_2g022000 23.002 413 241 14 3 359 16 407 2.81e-15 77.0
MS.gene50326.t1 MTR_4g028750 25.926 324 189 13 3 285 16 329 3.40e-15 76.6
MS.gene50326.t1 MTR_0464s0020 27.083 336 177 14 3 287 23 341 4.76e-15 76.6
MS.gene50326.t1 MTR_7g077970 24.852 338 203 8 3 298 7 335 4.77e-15 76.3
MS.gene50326.t1 MTR_4g031020 25.294 340 192 11 3 285 15 349 8.07e-15 75.9
MS.gene50326.t1 MTR_0128s0010 25.954 393 246 15 3 364 21 399 8.50e-15 75.5
MS.gene50326.t1 MTR_1g056710 25.574 305 195 12 2 291 33 320 8.64e-15 75.5
MS.gene50326.t1 MTR_3g058440 27.660 235 133 10 2 213 34 254 1.06e-14 74.3
MS.gene50326.t1 MTR_2g047200 24.870 386 217 19 3 345 20 375 1.07e-14 75.1
MS.gene50326.t1 MTR_7g091640 27.812 320 182 17 3 287 35 340 1.13e-14 75.1
MS.gene50326.t1 MTR_4g013175 25.068 367 218 10 6 323 13 371 1.31e-14 75.1
MS.gene50326.t1 MTR_8g063330 23.404 329 196 11 3 289 14 328 1.45e-14 75.1
MS.gene50326.t1 MTR_2g026010 28.354 328 196 14 2 305 3 315 1.52e-14 74.7
MS.gene50326.t1 MTR_7g091630 25.153 326 187 13 3 287 32 341 1.54e-14 75.1
MS.gene50326.t1 MTR_7g009265 27.372 274 155 11 86 323 15 280 1.55e-14 74.3
MS.gene50326.t1 MTR_4g028660 23.676 321 209 10 3 289 16 334 2.05e-14 74.3
MS.gene50326.t1 MTR_4g027450 23.676 321 209 10 3 289 16 334 2.05e-14 74.3
MS.gene50326.t1 MTR_5g043160 27.108 332 187 14 5 287 52 377 2.41e-14 74.3
MS.gene50326.t1 MTR_7g067680 27.181 298 177 12 3 290 49 316 2.60e-14 73.9
MS.gene50326.t1 MTR_5g022090 25.373 402 227 16 2 370 33 394 2.62e-14 73.9
MS.gene50326.t1 MTR_3g080370 25.248 404 239 15 17 370 35 425 3.95e-14 73.9
MS.gene50326.t1 MTR_0097s0030 25.946 370 210 16 1 337 12 350 4.17e-14 73.6
MS.gene50326.t1 MTR_2g047240 25.946 370 210 16 1 337 12 350 4.17e-14 73.6
MS.gene50326.t1 MTR_0242s0060 27.660 329 179 15 3 287 9 322 4.46e-14 73.6
MS.gene50326.t1 MTR_0242s0040 27.660 329 179 15 3 287 9 322 4.46e-14 73.6
MS.gene50326.t1 MTR_8g041270 23.022 417 244 13 3 367 15 406 8.31e-14 72.4
MS.gene50326.t1 MTR_4g055820 24.620 329 202 11 3 289 14 338 8.60e-14 72.4
MS.gene50326.t1 MTR_7g056170 24.194 372 201 14 3 323 75 416 1.01e-13 72.4
MS.gene50326.t1 MTR_8g101940 25.862 348 190 12 3 309 2 322 1.03e-13 72.0
MS.gene50326.t1 MTR_4g030110 24.438 356 202 13 3 323 30 353 1.14e-13 72.0
MS.gene50326.t1 MTR_4g013185 26.685 371 207 17 6 323 13 371 1.39e-13 72.0
MS.gene50326.t1 MTR_7g078840 24.186 430 250 13 3 363 10 432 1.48e-13 72.0
MS.gene50326.t1 MTR_7g078040 25.595 336 190 13 3 287 9 335 1.54e-13 72.0
MS.gene50326.t1 MTR_6g048140 27.389 314 178 14 3 290 39 328 1.76e-13 71.6
MS.gene50326.t1 MTR_3g009300 25.163 306 172 13 6 298 37 298 1.77e-13 71.2
MS.gene50326.t1 MTR_5g096630 22.807 342 194 13 1 289 16 340 1.81e-13 71.6
MS.gene50326.t1 MTR_7g055830 24.939 413 194 17 3 365 13 359 1.81e-13 71.2
MS.gene50326.t1 MTR_2g066170 23.248 314 202 9 3 285 12 317 2.23e-13 71.2
MS.gene50326.t1 MTR_2g006360 28.797 316 160 16 6 305 49 315 2.53e-13 70.9
MS.gene50326.t1 MTR_2g010900 25.890 309 188 13 23 298 3 303 2.99e-13 70.9
MS.gene50326.t1 MTR_7g017040 24.631 406 244 21 3 368 16 399 3.17e-13 70.9
MS.gene50326.t1 MTR_5g057040 30.102 196 105 8 3 188 46 219 3.29e-13 71.6
MS.gene50326.t1 MTR_6g086825 26.567 335 189 17 3 289 70 395 3.75e-13 70.9
MS.gene50326.t1 MTR_2g104280 23.501 417 244 16 3 368 14 406 4.01e-13 70.5
MS.gene50326.t1 MTR_7g069550 26.649 379 201 19 3 332 14 364 4.31e-13 70.5
MS.gene50326.t1 MTR_3g058480 28.077 260 150 11 2 238 38 283 4.42e-13 69.7
MS.gene50326.t1 MTR_7g056710 26.045 311 181 14 3 285 18 307 4.66e-13 70.1
MS.gene50326.t1 MTR_0054s0090 24.204 314 198 10 11 285 25 337 4.78e-13 70.1
MS.gene50326.t1 MTR_7g056260 25.882 340 157 16 3 287 14 313 5.79e-13 69.3
MS.gene50326.t1 MTR_4g037465 25.967 362 194 14 3 323 21 349 6.21e-13 69.7
MS.gene50326.t1 MTR_2g043400 27.245 323 181 10 3 287 23 329 6.36e-13 70.1
MS.gene50326.t1 MTR_5g069390 23.487 413 247 17 3 367 26 417 7.35e-13 70.1
MS.gene50326.t1 MTR_1g114700 25.385 390 230 18 3 362 29 387 9.37e-13 69.3
MS.gene50326.t1 MTR_6g079810 25.000 340 191 15 3 289 70 398 1.10e-12 69.3
MS.gene50326.t1 MTR_5g023570 37.037 108 58 3 3 107 37 137 1.17e-12 65.5
MS.gene50326.t1 MTR_3g030310 23.580 352 203 13 3 323 21 337 1.35e-12 68.9
MS.gene50326.t1 MTR_3g007300 27.027 370 208 15 3 362 49 366 1.43e-12 68.6
MS.gene50326.t1 MTR_7g052150 24.224 322 202 11 3 298 22 327 1.58e-12 68.6
MS.gene50326.t1 MTR_4g028680 24.615 325 202 15 3 289 16 335 1.85e-12 68.6
MS.gene50326.t1 MTR_3g011120 24.262 305 202 10 3 285 14 311 2.30e-12 68.2
MS.gene50326.t1 MTR_3g011650 28.182 220 131 8 6 214 82 285 2.30e-12 67.4
MS.gene50326.t1 MTR_8g046220 25.519 337 184 15 5 289 19 340 2.40e-12 68.2
MS.gene50326.t1 MTR_2g021210 25.073 343 220 14 3 337 84 397 2.45e-12 68.2
MS.gene50326.t1 MTR_1g055200 48.148 81 40 2 97 177 5 83 2.57e-12 63.2
MS.gene50326.t1 MTR_4g130330 23.096 407 245 16 3 365 7 389 2.76e-12 67.8
MS.gene50326.t1 MTR_3g010870 27.004 237 144 8 3 227 37 256 3.49e-12 67.0
MS.gene50326.t1 MTR_7g050490 30.457 197 106 8 3 184 8 188 3.53e-12 65.1
MS.gene50326.t1 MTR_6g017305 27.638 199 127 7 102 287 5 199 5.14e-12 66.2
MS.gene50326.t1 MTR_1g112010 22.152 316 205 10 32 335 9 295 5.23e-12 66.6
MS.gene50326.t1 MTR_7g066010 23.483 379 195 12 3 339 21 346 5.26e-12 67.0
MS.gene50326.t1 MTR_4g080200 23.889 360 218 12 1 341 1 323 6.42e-12 66.6
MS.gene50326.t1 MTR_8g063370 23.973 292 200 6 11 284 32 319 6.81e-12 66.6
MS.gene50326.t1 MTR_6g013270 25.316 316 185 13 3 291 29 320 6.97e-12 66.6
MS.gene50326.t1 MTR_0054s0100 23.148 324 207 10 3 285 17 339 7.25e-12 66.6
MS.gene50326.t1 MTR_5g064700 22.145 289 172 10 114 367 98 368 7.78e-12 66.2
MS.gene50326.t1 MTR_3g009250 28.182 220 134 8 3 213 41 245 1.07e-11 64.7
MS.gene50326.t1 MTR_7g061010 27.134 328 176 15 3 294 22 322 1.39e-11 65.9
MS.gene50326.t1 MTR_1g112930 25.321 312 180 11 3 291 25 306 1.46e-11 65.5
MS.gene50326.t1 MTR_5g048160 22.840 324 203 13 2 285 3 319 1.48e-11 65.5
MS.gene50326.t1 MTR_3g096250 26.333 300 155 13 3 290 47 292 1.58e-11 65.5
MS.gene50326.t1 MTR_2g031700 26.744 258 159 10 3 250 6 243 1.85e-11 64.7
MS.gene50326.t1 MTR_6g048120 25.815 368 215 18 3 340 36 375 2.02e-11 65.5
MS.gene50326.t1 MTR_6g065510 26.293 232 131 10 114 323 76 289 2.44e-11 64.7
MS.gene50326.t1 MTR_2g078870 26.070 257 155 13 114 362 78 307 3.30e-11 63.9
MS.gene50326.t1 MTR_7g056717 26.974 304 178 13 8 285 27 312 3.50e-11 64.3
MS.gene50326.t1 MTR_1g097370 22.936 327 163 13 3 323 68 311 3.79e-11 64.7
MS.gene50326.t1 MTR_8g467670 24.611 321 180 15 3 285 14 310 4.42e-11 64.3
MS.gene50326.t1 MTR_7g034310 27.160 243 128 12 139 363 17 228 5.78e-11 62.4
MS.gene50326.t1 MTR_6g034830 33.913 115 60 2 1 113 18 118 6.35e-11 59.7
MS.gene50326.t1 MTR_1g071010 25.000 324 190 15 4 292 16 321 7.11e-11 63.5
MS.gene50326.t1 MTR_4g024870 24.675 231 146 7 4 216 45 265 9.77e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50326.t1 AT3G06240 26.471 408 228 12 3 362 36 419 2.96e-23 100
MS.gene50326.t1 AT4G12560 28.529 333 195 15 3 306 4 322 1.35e-22 98.6
MS.gene50326.t1 AT4G12560 28.529 333 195 15 3 306 4 322 1.35e-22 98.6
MS.gene50326.t1 AT4G12560 28.529 333 195 15 3 306 4 322 1.35e-22 98.6
MS.gene50326.t1 AT3G23880 27.632 304 191 13 2 290 13 302 4.28e-20 90.9
MS.gene50326.t1 AT3G16210 26.351 296 178 13 3 289 5 269 2.45e-17 82.8
MS.gene50326.t1 AT4G22390 26.300 327 208 14 2 306 3 318 7.30e-17 81.6
MS.gene50326.t1 AT4G22390 26.300 327 208 14 2 306 3 318 7.69e-17 81.6
MS.gene50326.t1 AT1G11620 27.795 331 178 17 1 300 4 304 2.45e-16 80.1
MS.gene50326.t1 AT3G52320 26.122 245 166 7 2 238 26 263 2.92e-15 77.0
MS.gene50326.t1 AT2G40925 24.038 312 200 10 2 291 26 322 5.42e-15 76.3
MS.gene50326.t1 AT1G33530 25.559 313 207 10 1 306 95 388 5.25e-14 73.6
MS.gene50326.t1 AT3G21120 22.441 254 174 9 1 240 1 245 1.51e-13 71.6
MS.gene50326.t1 AT5G62660 28.854 253 130 11 2 226 40 270 6.05e-13 69.7
MS.gene50326.t1 AT1G47790 22.819 298 205 9 4 293 26 306 1.07e-12 69.3
MS.gene50326.t1 AT1G12870 22.368 380 229 15 3 348 33 380 1.39e-12 68.9
MS.gene50326.t1 AT3G21410 25.484 310 191 15 3 295 38 324 2.20e-12 68.2
MS.gene50326.t1 AT4G19940 23.164 354 210 12 2 323 34 357 3.06e-12 67.8
MS.gene50326.t1 AT3G08750 23.571 280 179 10 3 273 12 265 5.76e-12 67.0
MS.gene50326.t1 AT2G40920 24.921 317 182 14 8 289 59 354 6.71e-12 67.0
MS.gene50326.t1 AT2G40920 25.000 316 181 14 9 289 1 295 1.38e-11 65.9
MS.gene50326.t1 AT2G40910 22.656 256 178 6 2 245 61 308 1.56e-11 65.9
MS.gene50326.t1 AT3G16590 25.589 297 173 13 3 275 5 277 1.92e-11 65.5
MS.gene50326.t1 AT2G40910 22.656 256 178 6 2 245 68 315 2.10e-11 65.5
MS.gene50326.t1 AT3G17480 23.718 312 189 11 3 287 12 301 2.32e-11 65.1

Find 71 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGAATGGATTAACTTTAT+TGG 0.141488 4.4:+78190618 None:intergenic
ACAGAAAATGGTGATATTAT+TGG 0.164193 4.4:-78190136 MS.gene50326:CDS
CATTCTGATTTGTGGGTATT+TGG 0.164291 4.4:-78190346 MS.gene50326:CDS
TCAAATTCTGTTGAGGTTAC+AGG 0.238787 4.4:-78191058 MS.gene50326:CDS
GTAATGATACAATTGAAATA+TGG 0.247553 4.4:-78190291 MS.gene50326:CDS
CCCATGTATTCTACAGAAAA+TGG 0.267417 4.4:-78190148 MS.gene50326:CDS
TTGGAGAATTTCTCAGTCTA+TGG 0.269491 4.4:-78190327 MS.gene50326:CDS
AAATCCATAGATCGAATTTC+AGG 0.284233 4.4:+78190898 None:intergenic
AAAGCGTATATTAATCTATA+TGG 0.286604 4.4:-78190688 MS.gene50326:CDS
CTTCCTCAGCATGTCATTCC+TGG 0.289129 4.4:-78190220 MS.gene50326:CDS
TATATTAATCTATATGGTTT+TGG 0.298100 4.4:-78190682 MS.gene50326:CDS
CATTGTTGGCTTTGATTTAA+CGG 0.305680 4.4:-78190425 MS.gene50326:CDS
ATCTCCTGAAATTCGATCTA+TGG 0.311692 4.4:-78190902 MS.gene50326:CDS
GGTGATATTATTGGAAAATA+TGG 0.325508 4.4:-78190127 MS.gene50326:CDS
TTCGCGTCGTGATTTAGTTT+TGG 0.338685 4.4:-78190452 MS.gene50326:CDS
GTGAAAGTAGTCCGCAAATC+TGG 0.357133 4.4:+78190171 None:intergenic
ATCCGAAGTTGTCGTGTATA+CGG 0.381844 4.4:-78190035 MS.gene50326:CDS
GAGGGTAATCACTTACCTTA+TGG 0.385311 4.4:-78190532 MS.gene50326:CDS
TGGTGTTCCTCAATCACATT+TGG 0.386774 4.4:-78190593 MS.gene50326:CDS
AGTCTATGGGTTAAGGATAC+TGG 0.398340 4.4:-78190313 MS.gene50326:CDS
TGGTGACAATGAGCATGTTT+AGG 0.402786 4.4:-78189993 None:intergenic
TTAAAGGGAAAATAAGAGTC+TGG 0.407649 4.4:+78190823 None:intergenic
ATTTCTCAGTCTATGGGTTA+AGG 0.409114 4.4:-78190320 MS.gene50326:CDS
GCTCTGTGATCAACATCATT+TGG 0.411538 4.4:+78190376 None:intergenic
AAAGTTAATCCATTCTTAGT+TGG 0.417793 4.4:-78190613 MS.gene50326:CDS
ATTAGTACATTCTGATTTGT+GGG 0.419840 4.4:-78190353 MS.gene50326:CDS
TAATGATACAATTGAAATAT+GGG 0.423786 4.4:-78190290 MS.gene50326:CDS
CAGTTAAAGTTGGGTGAAGC+AGG 0.434268 4.4:+78190853 None:intergenic
CATTAGTACATTCTGATTTG+TGG 0.439657 4.4:-78190354 MS.gene50326:CDS
GTCATCGGAACATATACATT+TGG 0.445536 4.4:-78190762 MS.gene50326:CDS
ATATAGATTAATATACGCTT+TGG 0.449097 4.4:+78190690 None:intergenic
TCAAATGCATTTGTAAGTTG+TGG 0.467569 4.4:-78191017 MS.gene50326:CDS
TCTCGTTTAGAGACAATACT+TGG 0.472530 4.4:-78190564 MS.gene50326:CDS
TGGAAGGGAACAGTTAAAGT+TGG 0.481061 4.4:+78190843 None:intergenic
TGATCAACATCATTTGGAAC+AGG 0.489346 4.4:+78190382 None:intergenic
TCTCTATAATCGTCGCCATA+AGG 0.490230 4.4:+78190517 None:intergenic
AATACAAAGTGCATTCGTCT+TGG 0.494278 4.4:-78190258 MS.gene50326:CDS
TTATAGAGAAGGAGAAGGGT+TGG 0.497107 4.4:-78190503 MS.gene50326:CDS
TGGAGAATTTCTCAGTCTAT+GGG 0.497173 4.4:-78190326 MS.gene50326:CDS
TGAGGAACACCAACTAAGAA+TGG 0.498401 4.4:+78190604 None:intergenic
TTATATTCTTGTACCGTCAT+CGG 0.522500 4.4:-78190777 MS.gene50326:CDS
GGAAGGGAACAGTTAAAGTT+GGG 0.524712 4.4:+78190844 None:intergenic
AAAATTAAAGGGTCATGTAG+AGG 0.531563 4.4:-78190802 MS.gene50326:CDS
GAGTCGCTACTTTCACTCTC+TGG 0.534223 4.4:-78190013 MS.gene50326:CDS
AGGGAAAATAAGAGTCTGGA+AGG 0.536314 4.4:+78190827 None:intergenic
AAAATATGGTGGTACTAGAT+TGG 0.540379 4.4:-78190113 MS.gene50326:CDS
AAATTAAAGGGTCATGTAGA+GGG 0.543937 4.4:-78190801 MS.gene50326:CDS
TGATCATTCAAATTCTGTTG+AGG 0.546882 4.4:-78191065 MS.gene50326:CDS
TCTGTACTATTCCAGATTTG+CGG 0.550677 4.4:-78190182 MS.gene50326:CDS
CTCCGTATACACGACAACTT+CGG 0.566711 4.4:+78190033 None:intergenic
TTGGCTTTGATTTAACGGAA+AGG 0.585773 4.4:-78190420 MS.gene50326:CDS
GACGATTATAGAGAAGGAGA+AGG 0.587454 4.4:-78190508 MS.gene50326:CDS
TTCGGATGGACTGTTGCAGA+AGG 0.589220 4.4:+78190051 None:intergenic
TACATTTGGAATCCATCCAC+CGG 0.591847 4.4:-78190748 MS.gene50326:CDS
ATTTGAATGATCAGTTCTTG+AGG 0.594660 4.4:+78191075 None:intergenic
TATGGCGACGATTATAGAGA+AGG 0.601035 4.4:-78190514 MS.gene50326:CDS
GTCTAGAGATGATTATGTGG+TGG 0.603968 4.4:-78190650 MS.gene50326:CDS
AAATGTATATGTTCCGATGA+CGG 0.605626 4.4:+78190764 None:intergenic
CAAATCTGGAATAGTACAGA+GGG 0.610389 4.4:+78190185 None:intergenic
GCAAATCTGGAATAGTACAG+AGG 0.612314 4.4:+78190184 None:intergenic
CAATACTTGGAAAGAAATCG+AGG 0.619297 4.4:-78190551 MS.gene50326:CDS
GTATACACGACAACTTCGGA+TGG 0.623134 4.4:+78190037 None:intergenic
GGGAAAATAAGAGTCTGGAA+GGG 0.635385 4.4:+78190828 None:intergenic
TGACCAGGAATGACATGCTG+AGG 0.635899 4.4:+78190217 None:intergenic
TTGGTGAAGTATAATGACAA+AGG 0.639076 4.4:-78190094 MS.gene50326:CDS
GATATTATTGGAAAATATGG+TGG 0.639099 4.4:-78190124 MS.gene50326:CDS
ACGATTATAGAGAAGGAGAA+GGG 0.647918 4.4:-78190507 MS.gene50326:CDS
AAATGTGAATTTGCAAAGTG+AGG 0.647953 4.4:+78190976 None:intergenic
AGAGGGTTAAAGTAGTGACC+AGG 0.655673 4.4:+78190202 None:intergenic
AATACTTGGAAAGAAATCGA+GGG 0.666838 4.4:-78190550 MS.gene50326:CDS
TCAGTCTAGAGATGATTATG+TGG 0.684477 4.4:-78190653 MS.gene50326:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATGATACAATTGAAATAT+GGG - chr4.4:78190788-78190807 MS.gene50326:CDS 15.0%
!!! ATTTTCCCTTTAAAATTAAA+GGG - chr4.4:78190265-78190284 MS.gene50326:CDS 15.0%
!!! TATATTAATCTATATGGTTT+TGG - chr4.4:78190396-78190415 MS.gene50326:CDS 15.0%
!!! TATTTTCCCTTTAAAATTAA+AGG - chr4.4:78190264-78190283 MS.gene50326:CDS 15.0%
!! AAAGCGTATATTAATCTATA+TGG - chr4.4:78190390-78190409 MS.gene50326:CDS 20.0%
!! ATATAGATTAATATACGCTT+TGG + chr4.4:78190391-78190410 None:intergenic 20.0%
!! GTAATGATACAATTGAAATA+TGG - chr4.4:78190787-78190806 MS.gene50326:CDS 20.0%
!!! TAAGAATGGATTAACTTTAT+TGG + chr4.4:78190463-78190482 None:intergenic 20.0%
! AAAAATTCCAAATGTGATTG+AGG + chr4.4:78190495-78190514 None:intergenic 25.0%
! AAAGTTAATCCATTCTTAGT+TGG - chr4.4:78190465-78190484 MS.gene50326:CDS 25.0%
! ACAGAAAATGGTGATATTAT+TGG - chr4.4:78190942-78190961 MS.gene50326:CDS 25.0%
! GATATTATTGGAAAATATGG+TGG - chr4.4:78190954-78190973 MS.gene50326:CDS 25.0%
! GGTGATATTATTGGAAAATA+TGG - chr4.4:78190951-78190970 MS.gene50326:CDS 25.0%
!! ATTAGTACATTCTGATTTGT+GGG - chr4.4:78190725-78190744 MS.gene50326:CDS 25.0%
!!! ACATGACCCTTTAATTTTAA+AGG + chr4.4:78190274-78190293 None:intergenic 25.0%
!!! CATGACCCTTTAATTTTAAA+GGG + chr4.4:78190273-78190292 None:intergenic 25.0%
AAAATATGGTGGTACTAGAT+TGG - chr4.4:78190965-78190984 MS.gene50326:CDS 30.0%
AAAATTAAAGGGTCATGTAG+AGG - chr4.4:78190276-78190295 MS.gene50326:CDS 30.0%
AAATCCATAGATCGAATTTC+AGG + chr4.4:78190183-78190202 None:intergenic 30.0%
AAATGTATATGTTCCGATGA+CGG + chr4.4:78190317-78190336 None:intergenic 30.0%
AAATGTGAATTTGCAAAGTG+AGG + chr4.4:78190105-78190124 None:intergenic 30.0%
AAATTAAAGGGTCATGTAGA+GGG - chr4.4:78190277-78190296 MS.gene50326:CDS 30.0%
AATACTTGGAAAGAAATCGA+GGG - chr4.4:78190528-78190547 MS.gene50326:CDS 30.0%
ATTTGAATGATCAGTTCTTG+AGG + chr4.4:78190006-78190025 None:intergenic 30.0%
TCAAATGCATTTGTAAGTTG+TGG - chr4.4:78190061-78190080 MS.gene50326:CDS 30.0%
TGATCATTCAAATTCTGTTG+AGG - chr4.4:78190013-78190032 MS.gene50326:CDS 30.0%
TTAAAGGGAAAATAAGAGTC+TGG + chr4.4:78190258-78190277 None:intergenic 30.0%
TTATATTCTTGTACCGTCAT+CGG - chr4.4:78190301-78190320 MS.gene50326:CDS 30.0%
TTGGTGAAGTATAATGACAA+AGG - chr4.4:78190984-78191003 MS.gene50326:CDS 30.0%
! AAGTATTTGTCTTTTCGATC+CGG + chr4.4:78190352-78190371 None:intergenic 30.0%
! AATGACAAAGGACAGTTTTT+AGG - chr4.4:78190996-78191015 MS.gene50326:CDS 30.0%
! ACCATTTTCTGTAGAATACA+TGG + chr4.4:78190934-78190953 None:intergenic 30.0%
! ATGACAAAGGACAGTTTTTA+GGG - chr4.4:78190997-78191016 MS.gene50326:CDS 30.0%
! CATTAGTACATTCTGATTTG+TGG - chr4.4:78190724-78190743 MS.gene50326:CDS 30.0%
! CATTTTCTGTAGAATACATG+GGG + chr4.4:78190932-78190951 None:intergenic 30.0%
! CCATTTTCTGTAGAATACAT+GGG + chr4.4:78190933-78190952 None:intergenic 30.0%
! TGTGTTTTGCAAAGTTAAGT+TGG + chr4.4:78190128-78190147 None:intergenic 30.0%
! TTTTTAATGGGGCTATTCAT+TGG - chr4.4:78190598-78190617 MS.gene50326:CDS 30.0%
!! CATTGTTGGCTTTGATTTAA+CGG - chr4.4:78190653-78190672 MS.gene50326:CDS 30.0%
!!! TTAGTTTTGGATGTCATTGT+TGG - chr4.4:78190639-78190658 MS.gene50326:CDS 30.0%
AATACAAAGTGCATTCGTCT+TGG - chr4.4:78190820-78190839 MS.gene50326:CDS 35.0%
ACGATTATAGAGAAGGAGAA+GGG - chr4.4:78190571-78190590 MS.gene50326:CDS 35.0%
ATCTCCTGAAATTCGATCTA+TGG - chr4.4:78190176-78190195 MS.gene50326:CDS 35.0%
CAATACTTGGAAAGAAATCG+AGG - chr4.4:78190527-78190546 MS.gene50326:CDS 35.0%
CCCATGTATTCTACAGAAAA+TGG - chr4.4:78190930-78190949 MS.gene50326:CDS 35.0%
GTCATCGGAACATATACATT+TGG - chr4.4:78190316-78190335 MS.gene50326:CDS 35.0%
TCAAATTCTGTTGAGGTTAC+AGG - chr4.4:78190020-78190039 MS.gene50326:CDS 35.0%
TCAGTCTAGAGATGATTATG+TGG - chr4.4:78190425-78190444 MS.gene50326:CDS 35.0%
TCTCGTTTAGAGACAATACT+TGG - chr4.4:78190514-78190533 MS.gene50326:CDS 35.0%
TCTGTACTATTCCAGATTTG+CGG - chr4.4:78190896-78190915 MS.gene50326:CDS 35.0%
TGGAGAATTTCTCAGTCTAT+GGG - chr4.4:78190752-78190771 MS.gene50326:CDS 35.0%
TTGGAGAATTTCTCAGTCTA+TGG - chr4.4:78190751-78190770 MS.gene50326:CDS 35.0%
! ATTTCTCAGTCTATGGGTTA+AGG - chr4.4:78190758-78190777 MS.gene50326:CDS 35.0%
! CAAATCTGGAATAGTACAGA+GGG + chr4.4:78190896-78190915 None:intergenic 35.0%
! CATTCTGATTTGTGGGTATT+TGG - chr4.4:78190732-78190751 MS.gene50326:CDS 35.0%
! TGATCAACATCATTTGGAAC+AGG + chr4.4:78190699-78190718 None:intergenic 35.0%
!! TTGGCTTTGATTTAACGGAA+AGG - chr4.4:78190658-78190677 MS.gene50326:CDS 35.0%
!!! AGAAGGGTTGGTTTTTAATG+GGG - chr4.4:78190587-78190606 MS.gene50326:CDS 35.0%
!!! GAGAAGGGTTGGTTTTTAAT+GGG - chr4.4:78190586-78190605 MS.gene50326:CDS 35.0%
AGGGAAAATAAGAGTCTGGA+AGG + chr4.4:78190254-78190273 None:intergenic 40.0%
ATCCGAAGTTGTCGTGTATA+CGG - chr4.4:78191043-78191062 MS.gene50326:CDS 40.0%
GACGATTATAGAGAAGGAGA+AGG - chr4.4:78190570-78190589 MS.gene50326:CDS 40.0%
GAGGGTAATCACTTACCTTA+TGG - chr4.4:78190546-78190565 MS.gene50326:CDS 40.0%
GCTCTGTGATCAACATCATT+TGG + chr4.4:78190705-78190724 None:intergenic 40.0%
GGAAGGGAACAGTTAAAGTT+GGG + chr4.4:78190237-78190256 None:intergenic 40.0%
GGGAAAATAAGAGTCTGGAA+GGG + chr4.4:78190253-78190272 None:intergenic 40.0%
GTCTAGAGATGATTATGTGG+TGG - chr4.4:78190428-78190447 MS.gene50326:CDS 40.0%
TATGGCGACGATTATAGAGA+AGG - chr4.4:78190564-78190583 MS.gene50326:CDS 40.0%
TCTCTATAATCGTCGCCATA+AGG + chr4.4:78190564-78190583 None:intergenic 40.0%
TGAGGAACACCAACTAAGAA+TGG + chr4.4:78190477-78190496 None:intergenic 40.0%
TGGAAGGGAACAGTTAAAGT+TGG + chr4.4:78190238-78190257 None:intergenic 40.0%
TGGTGTTCCTCAATCACATT+TGG - chr4.4:78190485-78190504 MS.gene50326:CDS 40.0%
TTATAGAGAAGGAGAAGGGT+TGG - chr4.4:78190575-78190594 MS.gene50326:CDS 40.0%
! AGTCTATGGGTTAAGGATAC+TGG - chr4.4:78190765-78190784 MS.gene50326:CDS 40.0%
! GCAAATCTGGAATAGTACAG+AGG + chr4.4:78190897-78190916 None:intergenic 40.0%
! TACATTTGGAATCCATCCAC+CGG - chr4.4:78190330-78190349 MS.gene50326:CDS 40.0%
! TATTTGTCTTTTCGATCCGG+TGG + chr4.4:78190349-78190368 None:intergenic 40.0%
!! TTCGCGTCGTGATTTAGTTT+TGG - chr4.4:78190626-78190645 MS.gene50326:CDS 40.0%
!!! GGAGAAGGGTTGGTTTTTAA+TGG - chr4.4:78190585-78190604 MS.gene50326:CDS 40.0%
AGAGGGTTAAAGTAGTGACC+AGG + chr4.4:78190879-78190898 None:intergenic 45.0%
CAGTTAAAGTTGGGTGAAGC+AGG + chr4.4:78190228-78190247 None:intergenic 45.0%
CTCCGTATACACGACAACTT+CGG + chr4.4:78191048-78191067 None:intergenic 45.0%
GTATACACGACAACTTCGGA+TGG + chr4.4:78191044-78191063 None:intergenic 45.0%
GTGAAAGTAGTCCGCAAATC+TGG + chr4.4:78190910-78190929 None:intergenic 45.0%
CTTCCTCAGCATGTCATTCC+TGG - chr4.4:78190858-78190877 MS.gene50326:CDS 50.0%
TGACCAGGAATGACATGCTG+AGG + chr4.4:78190864-78190883 None:intergenic 50.0%
! GAGTCGCTACTTTCACTCTC+TGG - chr4.4:78191065-78191084 MS.gene50326:CDS 50.0%
! TGTCTTTTCGATCCGGTGGA+TGG + chr4.4:78190345-78190364 None:intergenic 50.0%
!! TTCGGATGGACTGTTGCAGA+AGG + chr4.4:78191030-78191049 None:intergenic 50.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 78189994 78191106 78189994 ID=MS.gene50326
chr4.4 mRNA 78189994 78191106 78189994 ID=MS.gene50326.t1;Parent=MS.gene50326
chr4.4 exon 78189994 78191106 78189994 ID=MS.gene50326.t1.exon1;Parent=MS.gene50326.t1
chr4.4 CDS 78189994 78191106 78189994 ID=cds.MS.gene50326.t1;Parent=MS.gene50326.t1
Gene Sequence

>MS.gene50326

ATGGATCTTCCTCAAGAACTGATCATTCAAATTCTGTTGAGGTTACAGGTGAAGTCTCTTATATTTTTCAAATGCATTTGTAAGTTGTGGTTTTCTATTATCTCTGATCCTCACTTTGCAAATTCACATTTCCAACTTAACTTTGCAAAACACACTCGTAGATTTTTATGCATATCAGCTCTATCTCCTGAAATTCGATCTATGGATTTTGATGCATTTCTTAACGATGCTCCTGCTTCACCCAACTTTAACTGTTCCCTTCCAGACTCTTATTTTCCCTTTAAAATTAAAGGGTCATGTAGAGGGTTTATATTCTTGTACCGTCATCGGAACATATACATTTGGAATCCATCCACCGGATCGAAAAGACAAATACTTATGTCTGCTTTTAATACCAAAGCGTATATTAATCTATATGGTTTTGGTTATGATCAGTCTAGAGATGATTATGTGGTGGTTTTATTGTCCAATAAAGTTAATCCATTCTTAGTTGGTGTTCCTCAATCACATTTGGAATTTTTCTCGTTTAGAGACAATACTTGGAAAGAAATCGAGGGTAATCACTTACCTTATGGCGACGATTATAGAGAAGGAGAAGGGTTGGTTTTTAATGGGGCTATTCATTGGTTGTCTTCGCGTCGTGATTTAGTTTTGGATGTCATTGTTGGCTTTGATTTAACGGAAAGGAAATTGTTTGAGATGCCTGTTCCAAATGATGTTGATCACAGAGCATTAGTACATTCTGATTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGGTTAAGGATACTGGTAATGATACAATTGAAATATGGGTTATGAAAGAATACAAAGTGCATTCGTCTTGGACTAAGACTCTTGTTCTTCCTCAGCATGTCATTCCTGGTCACTACTTTAACCCTCTGTACTATTCCAGATTTGCGGACTACTTTCACCCCATGTATTCTACAGAAAATGGTGATATTATTGGAAAATATGGTGGTACTAGATTGGTGAAGTATAATGACAAAGGACAGTTTTTAGGGCATCGCTCCTTCTGCAACAGTCCATCCGAAGTTGTCGTGTATACGGAGTCGCTACTTTCACTCTCTGGTGACAATGAGCATGTTTAG
Protein sequence

>MS.gene50326.t1

MDLPQELIIQILLRLQVKSLIFFKCICKLWFSIISDPHFANSHFQLNFAKHTRRFLCISALSPEIRSMDFDAFLNDAPASPNFNCSLPDSYFPFKIKGSCRGFIFLYRHRNIYIWNPSTGSKRQILMSAFNTKAYINLYGFGYDQSRDDYVVVLLSNKVNPFLVGVPQSHLEFFSFRDNTWKEIEGNHLPYGDDYREGEGLVFNGAIHWLSSRRDLVLDVIVGFDLTERKLFEMPVPNDVDHRALVHSDLWVFGEFLSLWVKDTGNDTIEIWVMKEYKVHSSWTKTLVLPQHVIPGHYFNPLYYSRFADYFHPMYSTENGDIIGKYGGTRLVKYNDKGQFLGHRSFCNSPSEVVVYTESLLSLSGDNEHV