AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51207


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51207.t1 MTR_2g048580 58.115 382 114 11 1 378 1 340 4.89e-139 399
MS.gene51207.t1 MTR_7g079370 57.971 345 130 9 37 375 16 351 3.24e-123 360
MS.gene51207.t1 MTR_7g079420 69.091 275 47 4 105 378 905 1142 1.54e-115 362
MS.gene51207.t1 MTR_7g079400 56.209 306 108 11 78 375 45 332 7.70e-101 302
MS.gene51207.t1 MTR_8g102520 48.438 384 128 15 1 378 1 320 9.75e-94 283
MS.gene51207.t1 MTR_3g034130 43.646 362 177 11 3 352 4 350 1.93e-86 266
MS.gene51207.t1 MTR_4g109270 45.619 388 175 14 1 378 1 362 2.16e-86 266
MS.gene51207.t1 MTR_6g060650 44.416 394 180 15 1 378 1 371 4.76e-85 263
MS.gene51207.t1 MTR_3g103020 42.636 387 190 14 1 378 13 376 8.77e-84 260
MS.gene51207.t1 MTR_4g109280 45.078 386 175 15 1 378 1 357 1.40e-82 256
MS.gene51207.t1 MTR_3g034180 42.455 391 194 14 1 378 115 487 3.67e-81 256
MS.gene51207.t1 MTR_4g094365 41.192 386 195 13 1 378 1 362 1.71e-79 248
MS.gene51207.t1 MTR_4g023080 41.344 387 183 14 1 378 1 352 1.18e-78 246
MS.gene51207.t1 MTR_5g070080 41.235 405 186 16 2 378 4 384 4.31e-78 245
MS.gene51207.t1 MTR_3g034160 41.538 390 197 12 1 377 1 372 6.66e-78 244
MS.gene51207.t1 MTR_1g055135 41.470 381 195 12 7 378 12 373 4.63e-77 243
MS.gene51207.t1 MTR_4g118380 44.355 372 167 13 1 349 1 355 1.62e-76 240
MS.gene51207.t1 MTR_5g070130 42.159 389 188 14 1 374 4 370 5.78e-76 240
MS.gene51207.t1 MTR_4g117770 42.893 394 180 13 1 378 1 365 4.23e-75 237
MS.gene51207.t1 MTR_4g117810 42.893 394 180 13 1 378 1 365 4.23e-75 237
MS.gene51207.t1 MTR_4g116330 42.746 386 186 16 2 377 17 377 4.45e-75 238
MS.gene51207.t1 MTR_4g021785 39.323 384 196 11 1 378 1 353 2.28e-74 235
MS.gene51207.t1 MTR_5g070088 38.903 401 193 12 3 374 2 379 2.29e-73 233
MS.gene51207.t1 MTR_4g117780 40.409 391 194 12 1 378 1 365 1.02e-72 231
MS.gene51207.t1 MTR_5g097210 42.105 380 192 12 2 376 3 359 5.97e-72 229
MS.gene51207.t1 MTR_4g023090 38.636 396 201 12 2 378 10 382 8.45e-72 229
MS.gene51207.t1 MTR_8g433040 40.838 382 188 15 3 378 13 362 9.13e-72 228
MS.gene51207.t1 MTR_8g032380 40.838 382 188 15 3 378 13 362 9.13e-72 228
MS.gene51207.t1 MTR_4g117720 41.558 385 159 16 1 375 44 372 1.36e-71 228
MS.gene51207.t1 MTR_4g117850 41.379 377 186 15 7 373 22 373 1.83e-71 228
MS.gene51207.t1 MTR_4g023070 38.832 394 190 15 8 378 3 368 5.02e-71 227
MS.gene51207.t1 MTR_4g122850 41.622 370 181 17 19 375 12 359 2.41e-69 223
MS.gene51207.t1 MTR_4g023120 38.734 395 189 15 8 378 3 368 2.91e-69 222
MS.gene51207.t1 MTR_4g023130 38.701 385 155 14 1 378 1 311 5.60e-69 219
MS.gene51207.t1 MTR_8g032390 40.212 378 177 15 3 374 35 369 9.39e-68 218
MS.gene51207.t1 MTR_4g117750 42.308 390 171 17 6 376 1 355 7.57e-67 219
MS.gene51207.t1 MTR_4g117750 38.849 139 72 5 250 378 346 481 2.27e-15 77.8
MS.gene51207.t1 MTR_4g023190 40.310 387 192 13 1 378 1 357 3.67e-66 214
MS.gene51207.t1 MTR_8g013010 44.718 284 133 11 1 281 47 309 1.59e-63 206
MS.gene51207.t1 MTR_4g023150 39.276 387 197 13 1 378 1 358 8.76e-63 205
MS.gene51207.t1 MTR_4g023440 39.075 389 160 17 2 378 7 330 4.85e-62 202
MS.gene51207.t1 MTR_4g116330 39.896 386 158 17 2 377 17 338 1.43e-61 201
MS.gene51207.t1 MTR_4g023380 35.381 407 192 12 2 378 10 375 8.30e-61 201
MS.gene51207.t1 MTR_5g069120 55.367 177 78 1 18 193 1 177 6.04e-60 192
MS.gene51207.t1 MTR_4g023200 39.018 387 198 12 1 378 1 358 8.40e-59 195
MS.gene51207.t1 MTR_8g098830 56.250 176 66 6 182 353 32 200 6.17e-53 175
MS.gene51207.t1 MTR_4g121580 37.151 358 172 15 1 345 1 318 5.30e-51 175
MS.gene51207.t1 MTR_8g433030 37.302 378 155 18 3 374 35 336 8.23e-51 173
MS.gene51207.t1 MTR_4g117870 37.500 312 136 9 69 376 7 263 7.81e-48 163
MS.gene51207.t1 MTR_1g055195 38.835 309 149 12 79 377 197 475 9.35e-47 166
MS.gene51207.t1 MTR_4g118400 38.909 275 115 10 104 374 69 294 1.47e-46 161
MS.gene51207.t1 MTR_1g055165 32.086 374 186 9 7 378 9 316 2.34e-44 156
MS.gene51207.t1 MTR_4g118370 42.424 264 109 11 118 377 33 257 2.67e-43 151
MS.gene51207.t1 MTR_1g055175 43.500 200 98 6 185 378 9 199 1.17e-42 148
MS.gene51207.t1 MTR_4g116340 40.000 250 116 9 1 244 26 247 1.97e-42 149
MS.gene51207.t1 MTR_7g079450 59.722 144 44 7 239 378 2 135 5.50e-41 141
MS.gene51207.t1 MTR_4g116320 41.818 220 116 6 160 377 46 255 1.29e-38 139
MS.gene51207.t1 MTR_4g107820 31.496 381 214 17 8 372 36 385 1.64e-35 134
MS.gene51207.t1 MTR_4g107780 31.496 381 214 17 8 372 36 385 1.64e-35 134
MS.gene51207.t1 MTR_4g107820 31.496 381 214 17 8 372 36 385 3.21e-35 134
MS.gene51207.t1 MTR_4g107780 31.496 381 214 17 8 372 36 385 3.98e-35 133
MS.gene51207.t1 MTR_1g055250 39.524 210 110 7 147 352 46 242 5.84e-35 131
MS.gene51207.t1 MTR_4g117530 36.154 260 107 9 123 378 47 251 1.74e-34 128
MS.gene51207.t1 MTR_0115s0020 30.091 329 200 13 8 315 10 329 5.69e-32 124
MS.gene51207.t1 MTR_8g040935 36.816 201 112 6 185 378 14 206 1.18e-31 119
MS.gene51207.t1 MTR_6g463430 40.306 196 104 8 185 378 16 200 2.10e-31 118
MS.gene51207.t1 MTR_5g022420 31.270 307 172 12 7 308 26 298 3.34e-31 122
MS.gene51207.t1 MTR_3g036290 28.446 341 196 13 8 337 22 325 4.69e-31 121
MS.gene51207.t1 MTR_0064s0160 29.429 350 208 13 4 326 38 375 2.06e-30 121
MS.gene51207.t1 MTR_4g114700 35.793 271 108 11 106 371 9 218 3.23e-30 116
MS.gene51207.t1 MTR_4g133170 27.393 303 191 10 8 304 4 283 9.01e-30 118
MS.gene51207.t1 MTR_4g117430 45.695 151 52 7 113 260 11 134 1.49e-29 112
MS.gene51207.t1 MTR_2g021150 28.824 340 201 16 7 329 13 328 3.00e-29 116
MS.gene51207.t1 MTR_4g108820 32.797 311 146 15 7 314 41 291 3.28e-28 112
MS.gene51207.t1 MTR_5g057710 26.384 307 190 10 8 305 46 325 3.41e-28 114
MS.gene51207.t1 MTR_3g007330 28.296 311 174 12 8 305 48 322 5.97e-28 113
MS.gene51207.t1 MTR_5g057690 27.129 317 193 13 8 318 46 330 1.90e-27 112
MS.gene51207.t1 MTR_5g057790 27.492 331 184 13 8 318 46 340 2.52e-27 112
MS.gene51207.t1 MTR_3g007360 29.373 303 182 12 11 305 55 333 2.74e-27 112
MS.gene51207.t1 MTR_7g117720 40.092 217 92 11 1 209 1 187 3.69e-27 108
MS.gene51207.t1 MTR_7g117720 32.301 226 115 9 181 375 54 272 7.72e-13 68.6
MS.gene51207.t1 MTR_4g055060 29.677 310 183 15 8 305 30 316 4.13e-27 111
MS.gene51207.t1 MTR_3g007410 29.703 303 181 12 11 305 55 333 5.59e-27 111
MS.gene51207.t1 MTR_1g097560 30.892 314 177 16 8 315 36 315 7.59e-27 110
MS.gene51207.t1 MTR_1g094210 28.250 400 194 18 8 372 57 398 8.80e-27 110
MS.gene51207.t1 MTR_6g065980 31.373 306 162 17 8 305 16 281 1.12e-26 109
MS.gene51207.t1 MTR_1g094210 28.533 375 178 17 8 347 57 376 2.88e-26 109
MS.gene51207.t1 MTR_3g014540 31.210 314 168 16 8 305 29 310 4.18e-26 108
MS.gene51207.t1 MTR_3g006670 31.494 308 176 14 8 305 49 331 4.78e-26 108
MS.gene51207.t1 MTR_1g055070 29.670 273 153 12 8 258 49 304 1.27e-25 107
MS.gene51207.t1 MTR_3g009310 29.126 309 179 10 8 305 42 321 1.85e-25 106
MS.gene51207.t1 MTR_8g467140 31.975 319 179 16 6 314 30 320 2.87e-25 105
MS.gene51207.t1 MTR_5g048160 28.349 321 199 10 8 304 4 317 2.95e-25 105
MS.gene51207.t1 MTR_5g057020 26.349 315 193 12 8 318 46 325 3.19e-25 105
MS.gene51207.t1 MTR_4g061340 30.063 316 172 12 8 305 26 310 6.15e-25 105
MS.gene51207.t1 MTR_1g050542 29.276 304 180 10 8 306 58 331 6.80e-25 105
MS.gene51207.t1 MTR_3g009240 28.302 318 166 12 8 305 36 311 1.21e-24 104
MS.gene51207.t1 MTR_2g055970 30.105 382 222 18 6 372 209 560 1.86e-24 105
MS.gene51207.t1 MTR_7g070830 26.627 338 194 11 8 305 21 344 1.98e-24 103
MS.gene51207.t1 MTR_3g013740 28.660 321 179 15 8 305 44 337 1.59e-23 101
MS.gene51207.t1 MTR_2g426090 27.019 322 190 12 6 304 5 304 1.62e-23 101
MS.gene51207.t1 MTR_5g011200 27.796 313 180 16 8 304 17 299 1.63e-23 100
MS.gene51207.t1 MTR_2g025420 27.248 367 216 15 8 339 6 356 1.88e-23 101
MS.gene51207.t1 MTR_2g028130 27.747 364 192 16 8 329 5 339 1.89e-23 101
MS.gene51207.t1 MTR_1g068875 25.329 304 197 7 8 304 4 284 2.02e-23 100
MS.gene51207.t1 MTR_0267s0050 27.245 323 190 9 8 305 7 309 2.18e-23 100
MS.gene51207.t1 MTR_3g014570 28.931 318 188 12 8 311 29 322 2.19e-23 100
MS.gene51207.t1 MTR_3g013770 31.193 327 155 15 8 305 33 318 3.11e-23 100
MS.gene51207.t1 MTR_7g067680 28.707 317 166 11 8 312 49 317 4.82e-23 99.8
MS.gene51207.t1 MTR_7g070440 28.923 325 179 16 5 305 4 300 4.93e-23 99.4
MS.gene51207.t1 MTR_5g007610 26.384 307 199 11 8 304 41 330 5.07e-23 99.8
MS.gene51207.t1 MTR_2g028140 27.545 334 182 14 8 304 5 315 5.60e-23 99.8
MS.gene51207.t1 MTR_2g028160 28.793 323 188 14 8 304 5 311 5.70e-23 99.8
MS.gene51207.t1 MTR_2g425980 27.619 315 197 9 8 304 5 306 5.79e-23 99.8
MS.gene51207.t1 MTR_1g115160 26.733 303 189 9 6 305 20 292 5.91e-23 99.4
MS.gene51207.t1 MTR_3g007270 28.483 323 173 18 8 304 47 337 5.96e-23 99.8
MS.gene51207.t1 MTR_7g055930 29.915 351 183 20 1 305 6 339 8.15e-23 99.4
MS.gene51207.t1 MTR_7g070880 26.757 370 208 15 8 329 21 375 9.28e-23 99.4
MS.gene51207.t1 MTR_2g021155 27.457 346 213 12 11 343 39 359 1.10e-22 100
MS.gene51207.t1 MTR_7g055870 30.484 351 181 21 1 305 6 339 1.52e-22 98.6
MS.gene51207.t1 MTR_3g011100 28.846 312 180 15 8 304 235 519 3.40e-22 98.6
MS.gene51207.t1 MTR_7g066000 29.429 350 207 17 6 329 23 358 3.95e-22 97.4
MS.gene51207.t1 MTR_7g407070 27.500 320 191 13 8 305 32 332 4.23e-22 97.1
MS.gene51207.t1 MTR_3g013950 26.235 324 198 9 6 305 5 311 4.80e-22 97.1
MS.gene51207.t1 MTR_3g083010 28.313 332 181 12 8 304 6 315 5.25e-22 97.1
MS.gene51207.t1 MTR_3g007430 26.214 309 183 10 11 305 46 323 5.82e-22 96.7
MS.gene51207.t1 MTR_7g091630 29.217 332 178 19 6 304 30 337 6.35e-22 97.1
MS.gene51207.t1 MTR_2g426070 28.840 319 186 15 9 304 7 307 9.56e-22 96.3
MS.gene51207.t1 MTR_8g101580 30.341 323 164 17 8 308 45 328 9.86e-22 95.9
MS.gene51207.t1 MTR_1g068835 25.407 307 194 9 8 304 4 285 1.30e-21 95.5
MS.gene51207.t1 MTR_1g054575 27.832 309 178 10 8 305 52 326 1.31e-21 97.1
MS.gene51207.t1 MTR_7g066100 26.471 408 244 15 4 374 7 395 1.39e-21 95.5
MS.gene51207.t1 MTR_4g109290 38.506 174 72 7 7 179 8 147 1.71e-21 91.3
MS.gene51207.t1 MTR_2g046920 28.344 314 188 14 4 308 20 305 2.04e-21 94.7
MS.gene51207.t1 MTR_1g061330 22.955 379 253 9 8 373 4 356 2.98e-21 94.7
MS.gene51207.t1 MTR_2g426020 27.273 319 187 14 8 304 6 301 3.07e-21 94.7
MS.gene51207.t1 MTR_1g097330 29.167 312 172 11 8 305 16 292 3.07e-21 94.7
MS.gene51207.t1 MTR_0667s0010 25.705 319 191 10 8 304 6 300 3.94e-21 94.4
MS.gene51207.t1 MTR_3g006570 26.452 310 194 12 8 309 21 304 5.21e-21 94.0
MS.gene51207.t1 MTR_4g031770 25.472 318 188 14 8 309 4 288 5.44e-21 93.6
MS.gene51207.t1 MTR_7g056503 27.885 312 200 12 7 304 20 320 6.02e-21 94.0
MS.gene51207.t1 MTR_0128s0020 29.042 334 182 14 5 309 15 322 6.59e-21 93.6
MS.gene51207.t1 MTR_7g062100 29.102 323 176 13 8 305 24 318 7.73e-21 93.6
MS.gene51207.t1 MTR_1g097490 28.346 381 218 19 8 372 49 390 9.23e-21 93.2
MS.gene51207.t1 MTR_2g028110 25.360 347 221 10 8 340 4 326 9.54e-21 93.2
MS.gene51207.t1 MTR_2g029990 26.797 306 191 14 9 305 52 333 1.12e-20 93.2
MS.gene51207.t1 MTR_5g022040 25.620 363 187 14 8 305 40 384 1.15e-20 93.6
MS.gene51207.t1 MTR_4g070550 26.462 325 191 14 8 304 5 309 1.17e-20 93.2
MS.gene51207.t1 MTR_3g010390 27.215 316 194 11 8 305 33 330 1.30e-20 92.8
MS.gene51207.t1 MTR_1g056710 30.224 268 142 12 8 258 34 273 1.59e-20 92.4
MS.gene51207.t1 MTR_2g024110 24.929 353 215 14 8 339 4 327 1.63e-20 92.4
MS.gene51207.t1 MTR_2g021190 27.869 305 191 14 8 305 21 303 2.07e-20 92.0
MS.gene51207.t1 MTR_6g021880 28.226 372 228 18 19 372 31 381 2.19e-20 92.0
MS.gene51207.t1 MTR_0044s0300 25.796 314 180 12 8 305 38 314 2.51e-20 92.0
MS.gene51207.t1 MTR_2g031680 26.316 304 194 9 8 304 6 286 2.69e-20 91.7
MS.gene51207.t1 MTR_2g021050 27.922 308 178 11 8 304 5 279 3.15e-20 91.7
MS.gene51207.t1 MTR_3g083640 25.566 309 185 12 8 305 55 329 4.24e-20 91.3
MS.gene51207.t1 MTR_0649s0020 25.061 407 233 15 8 372 11 387 7.47e-20 90.5
MS.gene51207.t1 MTR_3g010970 27.508 309 166 13 11 305 51 315 8.50e-20 90.5
MS.gene51207.t1 MTR_7g056290 26.816 358 183 12 8 320 22 345 1.06e-19 90.5
MS.gene51207.t1 MTR_7g007300 26.748 329 185 16 5 318 100 387 1.12e-19 90.5
MS.gene51207.t1 MTR_3g010430 26.168 321 183 13 8 309 36 321 1.15e-19 90.1
MS.gene51207.t1 MTR_3g436150 26.730 318 190 13 8 305 32 326 1.17e-19 90.1
MS.gene51207.t1 MTR_2g461450 26.888 331 198 12 6 330 16 308 1.35e-19 89.4
MS.gene51207.t1 MTR_7g066030 26.575 365 214 14 1 329 14 360 1.62e-19 89.7
MS.gene51207.t1 MTR_1g088120 27.381 336 185 11 6 305 8 320 2.59e-19 89.4
MS.gene51207.t1 MTR_3g072470 27.479 353 186 13 8 320 19 341 2.63e-19 89.4
MS.gene51207.t1 MTR_3g010870 26.578 301 191 10 8 305 37 310 3.09e-19 88.6
MS.gene51207.t1 MTR_3g036430 24.834 302 178 10 8 309 20 272 3.66e-19 88.2
MS.gene51207.t1 MTR_3g023930 27.687 307 166 13 8 305 34 293 4.17e-19 88.2
MS.gene51207.t1 MTR_4g118360 41.732 127 65 4 254 376 1 122 4.39e-19 82.8
MS.gene51207.t1 MTR_0128s0070 27.976 336 192 13 6 317 20 329 4.80e-19 88.2
MS.gene51207.t1 MTR_3g024110 25.392 319 178 12 8 309 101 376 5.18e-19 88.6
MS.gene51207.t1 MTR_2g426060 25.617 324 191 12 8 304 6 306 5.86e-19 88.2
MS.gene51207.t1 MTR_3g036335 25.707 389 230 18 8 372 41 394 7.60e-19 87.8
MS.gene51207.t1 MTR_2g078900 26.398 322 167 14 8 305 33 308 8.21e-19 87.0
MS.gene51207.t1 MTR_1g054725 25.964 389 233 19 7 372 19 375 8.37e-19 87.4
MS.gene51207.t1 MTR_4g013180 25.444 338 208 11 7 318 10 329 8.46e-19 88.2
MS.gene51207.t1 MTR_5g027330 25.625 320 188 12 12 305 44 339 8.48e-19 87.8
MS.gene51207.t1 MTR_0760s0010 27.707 314 178 16 13 315 52 327 8.56e-19 87.4
MS.gene51207.t1 MTR_7g057270 27.711 332 182 14 8 305 26 333 9.64e-19 87.4
MS.gene51207.t1 MTR_5g027370 25.625 320 188 12 12 305 33 328 9.79e-19 87.8
MS.gene51207.t1 MTR_2g104340 25.060 415 238 15 2 373 8 392 1.38e-18 87.0
MS.gene51207.t1 MTR_7g013590 29.412 306 180 14 11 305 39 319 1.72e-18 86.7
MS.gene51207.t1 MTR_8g099460 25.513 341 211 11 6 331 3 315 1.76e-18 86.7
MS.gene51207.t1 MTR_1g112930 26.498 317 197 13 8 317 25 312 2.34e-18 85.9
MS.gene51207.t1 MTR_3g010920 26.433 314 163 15 8 305 44 305 2.81e-18 85.9
MS.gene51207.t1 MTR_2g066200 23.775 408 246 16 2 373 6 384 3.28e-18 85.9
MS.gene51207.t1 MTR_4g030830 24.251 334 196 11 2 304 3 310 3.43e-18 85.9
MS.gene51207.t1 MTR_3g011060 26.266 316 191 14 8 305 28 319 3.85e-18 85.5
MS.gene51207.t1 MTR_3g010520 28.000 300 175 12 8 305 25 285 4.05e-18 85.1
MS.gene51207.t1 MTR_6g027910 28.086 324 199 17 11 318 12 317 4.09e-18 85.5
MS.gene51207.t1 MTR_8g062660 26.911 327 182 16 2 304 16 309 4.13e-18 86.3
MS.gene51207.t1 MTR_2g047832 27.356 329 192 14 4 308 25 330 5.32e-18 85.5
MS.gene51207.t1 MTR_7g077970 29.143 350 185 16 8 315 7 335 5.44e-18 85.5
MS.gene51207.t1 MTR_2g031640 25.974 308 193 14 8 304 6 289 5.99e-18 85.1
MS.gene51207.t1 MTR_7g078040 27.485 342 190 15 6 305 7 332 6.99e-18 85.1
MS.gene51207.t1 MTR_2g025960 27.149 221 130 8 101 304 3 209 7.21e-18 84.0
MS.gene51207.t1 MTR_7g028660 26.994 326 185 15 6 304 9 308 7.37e-18 84.7
MS.gene51207.t1 MTR_3g030350 26.513 347 216 13 8 343 35 353 8.06e-18 84.7
MS.gene51207.t1 MTR_2g021252 25.084 299 185 10 11 304 50 314 1.34e-17 84.0
MS.gene51207.t1 MTR_5g023000 46.316 95 46 2 287 378 5 97 1.35e-17 77.8
MS.gene51207.t1 MTR_2g031720 26.791 321 178 14 8 304 6 293 1.45e-17 84.0
MS.gene51207.t1 MTR_6g004660 28.481 316 186 15 8 305 16 309 1.55e-17 83.6
MS.gene51207.t1 MTR_5g096630 25.240 416 250 18 2 373 12 410 1.56e-17 84.0
MS.gene51207.t1 MTR_2g066170 22.084 403 253 16 2 371 6 380 1.67e-17 83.6
MS.gene51207.t1 MTR_4g028510 28.274 336 199 16 2 305 7 332 1.71e-17 84.0
MS.gene51207.t1 MTR_4g122860 31.500 200 88 9 190 378 157 318 1.80e-17 83.2
MS.gene51207.t1 MTR_8g039500 25.455 330 192 13 2 305 6 307 1.84e-17 83.2
MS.gene51207.t1 MTR_4g019990 26.409 337 180 15 6 304 4 310 1.95e-17 83.6
MS.gene51207.t1 MTR_5g096710 25.294 340 197 15 6 315 21 333 2.55e-17 83.2
MS.gene51207.t1 MTR_3g011120 28.485 330 181 18 2 304 8 309 2.67e-17 82.8
MS.gene51207.t1 MTR_2g043400 25.758 330 187 9 8 305 23 326 2.73e-17 83.2
MS.gene51207.t1 MTR_5g022090 27.653 311 169 12 8 305 34 301 3.50e-17 82.8
MS.gene51207.t1 MTR_3g030250 23.779 307 187 10 8 305 37 305 3.92e-17 82.4
MS.gene51207.t1 MTR_0097s0030 26.444 329 177 12 6 304 12 305 4.09e-17 82.4
MS.gene51207.t1 MTR_2g047240 26.444 329 177 12 6 304 12 305 4.09e-17 82.4
MS.gene51207.t1 MTR_6g055210 26.250 320 204 8 7 305 21 329 4.66e-17 82.8
MS.gene51207.t1 MTR_7g056390 25.568 352 195 12 8 320 18 341 4.93e-17 82.4
MS.gene51207.t1 MTR_4g023430 48.780 82 40 1 1 80 32 113 5.21e-17 79.7
MS.gene51207.t1 MTR_4g030980 26.050 357 180 15 8 304 15 347 6.02e-17 82.4
MS.gene51207.t1 MTR_0242s0060 26.866 335 188 12 6 305 7 319 6.78e-17 82.0
MS.gene51207.t1 MTR_0242s0040 26.866 335 188 12 6 305 7 319 6.78e-17 82.0
MS.gene51207.t1 MTR_2g046900 28.349 321 187 17 4 308 24 317 7.40e-17 81.6
MS.gene51207.t1 MTR_5g069760 25.786 318 192 11 6 305 4 295 7.56e-17 81.6
MS.gene51207.t1 MTR_6g086825 25.728 412 247 20 7 378 69 461 8.52e-17 82.0
MS.gene51207.t1 MTR_7g060940 28.024 339 175 14 1 305 15 318 8.70e-17 81.6
MS.gene51207.t1 MTR_2g046800 27.532 385 197 18 8 342 14 366 8.78e-17 81.6
MS.gene51207.t1 MTR_7g055977 26.380 326 184 11 6 305 5 300 8.80e-17 81.3
MS.gene51207.t1 MTR_7g066010 24.324 370 180 15 3 329 16 328 8.86e-17 81.3
MS.gene51207.t1 MTR_7g077070 24.779 339 210 13 1 305 9 336 9.82e-17 81.6
MS.gene51207.t1 MTR_5g069930 25.938 320 194 13 6 305 4 300 1.03e-16 81.3
MS.gene51207.t1 MTR_4g031020 24.581 358 190 13 5 304 12 347 1.05e-16 81.6
MS.gene51207.t1 MTR_5g046300 24.679 312 184 15 8 305 4 278 1.07e-16 80.9
MS.gene51207.t1 MTR_5g046290 24.679 312 184 15 8 305 4 278 1.07e-16 80.9
MS.gene51207.t1 MTR_6g090180 25.815 399 224 19 2 352 41 415 1.11e-16 81.6
MS.gene51207.t1 MTR_6g034720 43.902 123 57 5 129 250 53 164 1.12e-16 78.6
MS.gene51207.t1 MTR_1g068860 23.585 318 220 8 6 319 2 300 1.20e-16 80.9
MS.gene51207.t1 MTR_6g007135 28.254 315 184 15 8 305 26 315 1.28e-16 80.9
MS.gene51207.t1 MTR_1g055055 26.710 307 174 13 6 304 24 287 1.30e-16 80.5
MS.gene51207.t1 MTR_4g129160 27.941 340 181 17 8 305 7 324 1.54e-16 80.5
MS.gene51207.t1 MTR_7g056760 25.610 328 196 16 6 305 21 328 1.84e-16 80.5
MS.gene51207.t1 MTR_4g117550 26.536 407 226 20 2 378 11 374 1.88e-16 80.5
MS.gene51207.t1 MTR_7g055987 27.134 328 181 13 10 314 22 314 2.20e-16 80.1
MS.gene51207.t1 MTR_2g024100 26.284 331 195 13 14 323 14 316 2.29e-16 80.5
MS.gene51207.t1 MTR_8g073550 28.502 207 116 7 7 200 29 216 3.18e-16 77.8
MS.gene51207.t1 MTR_4g028660 25.672 335 206 12 2 305 7 329 3.42e-16 79.7
MS.gene51207.t1 MTR_4g027450 25.672 335 206 12 2 305 7 329 3.42e-16 79.7
MS.gene51207.t1 MTR_7g062060 24.405 336 206 12 3 305 7 327 3.46e-16 79.7
MS.gene51207.t1 MTR_3g006530 23.659 317 188 11 8 304 40 322 3.68e-16 79.7
MS.gene51207.t1 MTR_8g064890 25.823 395 247 15 2 370 7 381 3.71e-16 79.7
MS.gene51207.t1 MTR_3g024150 24.262 305 190 10 11 305 38 311 4.08e-16 79.3
MS.gene51207.t1 MTR_4g080200 27.152 302 179 11 8 297 3 275 4.47e-16 79.0
MS.gene51207.t1 MTR_3g030330 25.063 399 218 18 8 372 20 371 4.70e-16 79.3
MS.gene51207.t1 MTR_1g029650 23.582 335 198 10 1 305 1 307 4.70e-16 79.3
MS.gene51207.t1 MTR_4g129190 27.190 331 187 15 4 305 2 307 4.92e-16 79.3
MS.gene51207.t1 MTR_2g047200 26.531 343 169 15 6 305 18 320 5.52e-16 79.3
MS.gene51207.t1 MTR_2g021800 24.641 418 248 16 7 375 15 414 6.57e-16 79.0
MS.gene51207.t1 MTR_6g053260 25.868 317 190 13 8 309 337 623 8.93e-16 79.3
MS.gene51207.t1 MTR_7g069550 27.363 402 209 24 1 350 5 375 9.31e-16 78.6
MS.gene51207.t1 MTR_5g056020 26.627 338 193 15 8 305 17 339 1.11e-15 78.6
MS.gene51207.t1 MTR_6g053240 23.602 322 196 11 8 309 28 319 1.15e-15 78.2
MS.gene51207.t1 MTR_0128s0010 25.868 317 197 11 8 305 21 318 1.57e-15 77.8
MS.gene51207.t1 MTR_3g058480 27.612 268 154 12 8 258 39 283 1.61e-15 77.0
MS.gene51207.t1 MTR_3g030240 23.779 307 182 13 8 305 40 303 1.88e-15 77.4
MS.gene51207.t1 MTR_4g055820 24.658 365 221 12 2 328 8 356 2.55e-15 77.0
MS.gene51207.t1 MTR_2g065860 22.936 327 213 9 2 304 6 317 2.55e-15 77.0
MS.gene51207.t1 MTR_2g026010 25.649 308 198 11 8 304 4 291 2.82e-15 77.0
MS.gene51207.t1 MTR_6g013270 26.774 310 190 15 8 305 29 313 2.94e-15 77.0
MS.gene51207.t1 MTR_7g078860 25.549 364 189 13 3 319 4 332 2.99e-15 77.0
MS.gene51207.t1 MTR_4g024890 25.994 327 183 15 6 304 8 303 3.04e-15 77.0
MS.gene51207.t1 MTR_5g010660 24.138 319 179 12 8 305 34 310 3.04e-15 77.4
MS.gene51207.t1 MTR_6g017280 24.768 323 198 13 6 305 7 307 3.65e-15 76.6
MS.gene51207.t1 MTR_5g009060 27.928 333 183 16 8 304 25 336 3.67e-15 76.6
MS.gene51207.t1 MTR_5g068040 25.758 330 184 15 8 314 16 307 4.55e-15 76.3
MS.gene51207.t1 MTR_0054s0090 23.430 414 243 17 7 373 16 402 4.62e-15 76.6
MS.gene51207.t1 MTR_7g022600 27.826 345 192 15 6 309 21 349 4.64e-15 76.6
MS.gene51207.t1 MTR_4g014370 23.487 413 261 15 4 373 5 405 5.13e-15 76.3
MS.gene51207.t1 MTR_4g028680 24.927 341 202 13 2 305 7 330 5.30e-15 76.3
MS.gene51207.t1 MTR_4g030090 26.316 323 189 15 8 304 14 313 5.50e-15 76.3
MS.gene51207.t1 MTR_4g102410 26.667 345 208 18 2 312 55 388 6.02e-15 76.3
MS.gene51207.t1 MTR_7g056820 25.326 383 213 18 8 350 7 356 7.54e-15 75.5
MS.gene51207.t1 MTR_5g046260 24.252 301 169 14 8 305 4 248 8.30e-15 74.7
MS.gene51207.t1 MTR_2g047892 26.205 332 180 15 6 304 20 319 1.08e-14 75.5
MS.gene51207.t1 MTR_5g069390 24.574 411 252 19 1 371 19 411 1.39e-14 75.5
MS.gene51207.t1 MTR_1g442850 28.308 325 179 16 7 305 4 300 1.44e-14 74.7
MS.gene51207.t1 MTR_4g037465 25.602 332 177 13 8 305 21 316 1.48e-14 74.7
MS.gene51207.t1 MTR_4g013185 26.286 350 183 13 6 305 8 332 1.49e-14 75.1
MS.gene51207.t1 MTR_0129s0050 25.298 419 244 17 2 373 8 404 1.62e-14 74.7
MS.gene51207.t1 MTR_2g031700 26.104 249 161 9 8 254 6 233 1.79e-14 73.6
MS.gene51207.t1 MTR_6g016285 24.556 338 190 12 6 305 19 329 1.79e-14 74.7
MS.gene51207.t1 MTR_4g030110 25.000 352 175 13 8 325 30 326 2.25e-14 74.3
MS.gene51207.t1 MTR_2g078850 25.566 309 183 15 11 305 33 308 3.29e-14 73.6
MS.gene51207.t1 MTR_7g016930 27.329 322 186 19 3 304 9 302 3.35e-14 73.2
MS.gene51207.t1 MTR_7g061050 27.647 340 164 17 5 305 10 306 3.41e-14 73.6
MS.gene51207.t1 MTR_5g008530 63.043 46 17 0 8 53 18 63 3.63e-14 67.4
MS.gene51207.t1 MTR_5g097330 26.442 416 236 19 2 373 10 399 4.07e-14 73.6
MS.gene51207.t1 MTR_3g030310 25.153 326 175 15 8 305 21 305 5.01e-14 73.2
MS.gene51207.t1 MTR_5g057040 26.512 215 133 7 8 214 46 243 5.04e-14 74.3
MS.gene51207.t1 MTR_1g007410 25.444 338 198 13 3 305 17 335 7.97e-14 72.8
MS.gene51207.t1 MTR_5g037680 23.659 410 246 17 1 372 1 381 9.12e-14 72.8
MS.gene51207.t1 MTR_0129s0070 24.515 412 251 20 2 378 11 397 1.01e-13 72.4
MS.gene51207.t1 MTR_7g061060 25.152 330 188 12 5 305 10 309 1.40e-13 72.0
MS.gene51207.t1 MTR_0464s0020 24.857 350 199 13 6 314 21 347 1.62e-13 72.0
MS.gene51207.t1 MTR_8g041270 25.604 414 246 18 2 373 9 402 1.62e-13 71.6
MS.gene51207.t1 MTR_4g028750 23.140 363 223 16 6 337 14 351 1.66e-13 71.6
MS.gene51207.t1 MTR_1g114700 23.794 311 195 11 8 304 29 311 1.70e-13 71.6
MS.gene51207.t1 MTR_5g075370 28.231 294 160 14 1 257 1 280 1.99e-13 72.4
MS.gene51207.t1 MTR_7g066080 27.536 345 191 15 8 314 16 339 2.01e-13 71.6
MS.gene51207.t1 MTR_2g437110 27.356 329 181 16 6 305 20 319 2.04e-13 71.6
MS.gene51207.t1 MTR_7g056200 24.786 351 181 12 5 319 20 323 2.09e-13 71.2
MS.gene51207.t1 MTR_2g021210 25.325 308 184 14 8 305 84 355 2.69e-13 71.2
MS.gene51207.t1 MTR_7g056797 25.705 319 203 14 6 304 21 325 2.94e-13 70.9
MS.gene51207.t1 MTR_8g012090 24.921 317 184 12 7 305 15 295 4.88e-13 69.7
MS.gene51207.t1 MTR_8g467670 24.728 368 212 16 7 347 13 342 5.37e-13 70.1
MS.gene51207.t1 MTR_2g006360 26.230 305 158 14 5 305 43 284 5.49e-13 70.1
MS.gene51207.t1 MTR_2g043410 25.000 332 187 11 8 305 22 325 6.57e-13 70.1
MS.gene51207.t1 MTR_3g023940 27.273 319 174 15 8 305 34 315 8.39e-13 69.3
MS.gene51207.t1 MTR_7g055850 30.131 229 120 12 1 198 6 225 8.52e-13 68.6
MS.gene51207.t1 MTR_1g047490 23.442 337 193 12 6 319 20 314 1.11e-12 68.6
MS.gene51207.t1 MTR_1g055200 45.161 93 38 3 103 194 6 86 1.19e-12 64.3
MS.gene51207.t1 MTR_1g115185 25.949 316 185 15 7 305 38 321 1.24e-12 68.9
MS.gene51207.t1 MTR_3g437520 24.157 356 197 14 6 314 21 350 1.24e-12 69.3
MS.gene51207.t1 MTR_7g078840 24.665 373 206 12 1 318 3 355 1.25e-12 69.3
MS.gene51207.t1 MTR_3g009300 25.497 302 163 11 11 305 37 283 1.33e-12 68.6
MS.gene51207.t1 MTR_3g030320 29.268 246 132 15 67 305 12 222 1.34e-12 68.2
MS.gene51207.t1 MTR_1g071010 25.153 326 189 15 8 305 15 313 1.60e-12 68.6
MS.gene51207.t1 MTR_7g052150 26.140 329 180 16 6 305 20 314 2.01e-12 68.6
MS.gene51207.t1 MTR_7g060960 28.302 318 156 17 6 305 30 293 2.19e-12 68.2
MS.gene51207.t1 MTR_3g011650 27.586 232 126 10 11 231 82 282 2.27e-12 67.4
MS.gene51207.t1 MTR_2g022000 23.724 392 237 15 7 350 15 392 2.39e-12 68.2
MS.gene51207.t1 MTR_5g057643 26.271 236 127 9 8 226 46 251 2.48e-12 67.0
MS.gene51207.t1 MTR_3g009290 30.709 254 133 15 8 250 35 256 2.63e-12 66.6
MS.gene51207.t1 MTR_4g013175 25.410 366 196 14 6 318 8 349 2.74e-12 68.2
MS.gene51207.t1 MTR_4g011660 25.989 354 175 17 6 305 17 337 2.83e-12 68.2
MS.gene51207.t1 MTR_7g052670 25.581 344 201 12 6 305 19 351 4.38e-12 67.4
MS.gene51207.t1 MTR_7g056003 25.369 339 194 12 8 314 15 326 5.50e-12 67.0
MS.gene51207.t1 MTR_3g024130 24.883 213 127 10 101 305 58 245 6.19e-12 66.2
MS.gene51207.t1 MTR_7g061090 23.235 340 192 12 6 305 20 330 7.63e-12 66.6
MS.gene51207.t1 MTR_1g037540 23.691 401 240 17 8 366 5 381 8.49e-12 66.6
MS.gene51207.t1 MTR_4g033495 27.356 329 180 15 8 305 27 327 8.57e-12 66.6
MS.gene51207.t1 MTR_3g024040 24.832 298 179 13 15 304 38 298 8.98e-12 66.2
MS.gene51207.t1 MTR_3g464500 24.484 339 203 14 6 318 25 336 1.07e-11 66.2
MS.gene51207.t1 MTR_5g094350 22.483 298 156 11 6 261 11 275 1.13e-11 65.1
MS.gene51207.t1 MTR_7g078050 35.115 131 67 6 6 124 4 128 1.14e-11 64.7
MS.gene51207.t1 MTR_3g010870 26.339 224 141 6 8 229 37 238 1.18e-11 65.5
MS.gene51207.t1 MTR_7g445750 25.926 324 197 13 6 300 21 330 1.32e-11 65.5
MS.gene51207.t1 MTR_1g068905 26.277 274 154 9 8 273 4 237 2.41e-11 64.7
MS.gene51207.t1 MTR_7g035295 23.939 330 172 12 6 305 14 294 2.59e-11 65.1
MS.gene51207.t1 MTR_2g065840 24.699 332 200 16 2 304 6 316 2.80e-11 64.7
MS.gene51207.t1 MTR_3g058470 29.187 209 119 10 8 199 37 233 2.93e-11 64.7
MS.gene51207.t1 MTR_3g058440 24.074 270 159 12 8 258 35 277 3.58e-11 63.9
MS.gene51207.t1 MTR_6g017270 23.048 269 163 9 6 253 7 252 3.67e-11 64.3
MS.gene51207.t1 MTR_5g023570 42.453 106 55 4 7 111 36 136 4.70e-11 60.8
MS.gene51207.t1 MTR_5g092850 24.878 410 245 18 7 376 15 401 4.98e-11 64.3
MS.gene51207.t1 MTR_0831s0010 24.938 405 230 21 7 373 49 417 6.16e-11 63.9
MS.gene51207.t1 MTR_4g134390 25.632 277 175 9 2 265 11 269 9.32e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51207.t1 AT3G06240 27.778 342 187 12 4 305 32 353 7.54e-27 111
MS.gene51207.t1 AT4G22390 25.743 303 206 8 9 305 5 294 4.98e-25 105
MS.gene51207.t1 AT4G22390 25.743 303 206 8 9 305 5 294 5.45e-25 105
MS.gene51207.t1 AT4G12560 25.402 311 203 11 8 305 4 298 4.08e-23 100
MS.gene51207.t1 AT4G12560 25.402 311 203 11 8 305 4 298 4.08e-23 100
MS.gene51207.t1 AT4G12560 25.402 311 203 11 8 305 4 298 4.08e-23 100
MS.gene51207.t1 AT3G23880 26.149 348 213 14 8 341 14 331 1.37e-18 86.7
MS.gene51207.t1 AT5G49610 27.687 307 188 11 3 302 4 283 5.98e-17 81.6
MS.gene51207.t1 AT2G16810 27.519 258 163 11 7 259 40 278 9.72e-17 80.5
MS.gene51207.t1 AT3G07870 23.988 321 194 12 8 304 28 322 8.06e-15 75.9
MS.gene51207.t1 AT1G33530 25.478 314 175 14 6 304 95 364 1.94e-14 74.7
MS.gene51207.t1 AT4G19940 23.684 304 200 9 8 293 35 324 2.04e-14 74.7
MS.gene51207.t1 AT4G19930 25.076 331 208 14 7 318 42 351 2.30e-14 74.7
MS.gene51207.t1 AT1G50870 23.077 312 202 9 9 312 32 313 2.38e-14 74.3
MS.gene51207.t1 AT3G22720 23.179 302 207 10 8 303 5 287 5.28e-14 73.2
MS.gene51207.t1 AT1G11620 28.302 265 145 14 8 257 6 240 1.60e-13 71.6
MS.gene51207.t1 AT5G65850 23.636 330 202 13 3 320 30 321 2.47e-12 68.2
MS.gene51207.t1 AT5G52610 29.545 220 128 8 8 226 2 195 3.05e-12 67.8
MS.gene51207.t1 AT3G17570 24.603 252 160 8 8 256 5 229 7.69e-12 66.6
MS.gene51207.t1 AT3G16210 26.190 252 152 11 7 257 4 222 8.72e-12 66.2
MS.gene51207.t1 AT1G53550 25.309 324 189 17 8 312 35 324 1.52e-11 65.9
MS.gene51207.t1 AT2G02030 24.211 285 170 9 2 257 33 300 1.53e-11 65.5
MS.gene51207.t1 AT1G12870 22.487 378 239 16 8 356 33 385 2.32e-11 65.5
MS.gene51207.t1 AT3G52320 25.591 254 165 7 8 257 27 260 2.49e-11 65.1
MS.gene51207.t1 AT3G49980 23.828 256 169 10 8 257 5 240 2.67e-11 65.1
MS.gene51207.t1 AT3G49980 23.828 256 169 10 8 257 6 241 2.91e-11 64.7
MS.gene51207.t1 AT3G47150 50.794 63 29 1 5 65 9 71 2.97e-11 64.7
MS.gene51207.t1 AT3G22730 22.462 325 196 15 11 316 9 296 3.62e-11 64.3
MS.gene51207.t1 AT1G30790 24.731 279 168 11 1 259 1 257 9.06e-11 63.5

Find 82 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATTGCCTTTGATTTAA+AGG 0.116438 7.3:+27813632 MS.gene51207:CDS
TTTGATGTATTGGTACTTAA+TGG 0.184691 7.3:+27813720 MS.gene51207:CDS
TGTTCTGATCCTGATATTAT+AGG 0.199846 7.3:+27813198 MS.gene51207:CDS
ATGCATTAAAATCTATTGTT+AGG 0.273972 7.3:-27813122 None:intergenic
ATGTAGAGGGTTTCTATTAT+TGG 0.282829 7.3:+27813224 MS.gene51207:CDS
TCTCATTGAAAGCTAATAAC+TGG 0.288898 7.3:+27813475 MS.gene51207:CDS
TGGTGTATGGATTTCAGATA+TGG 0.327075 7.3:+27813749 MS.gene51207:CDS
TTGGTACTTAATGGACTTAT+TGG 0.335883 7.3:+27813729 MS.gene51207:CDS
TCTATACCGGCAACAGTTAT+AGG 0.343376 7.3:-27813312 None:intergenic
ATTTCCTTTATCACATCTTC+AGG 0.350571 7.3:-27812937 None:intergenic
TGGACGAAACAGTTGAGATA+TGG 0.375897 7.3:+27813769 MS.gene51207:CDS
CTGCTAGAGCACCTCTATTA+TGG 0.378058 7.3:+27813948 MS.gene51207:CDS
TTAATGGACTTATTGGTGTA+TGG 0.382670 7.3:+27813736 MS.gene51207:CDS
TAATAACTGGAAACAAATTC+AGG 0.385142 7.3:+27813488 MS.gene51207:CDS
GAGTCGGGTTGTTCTTGAAT+GGG 0.385506 7.3:+27813565 MS.gene51207:CDS
CTACATGAACCTATAATATC+AGG 0.386021 7.3:-27813207 None:intergenic
GCAAGTGCGTTTGTAAGTTA+TGG 0.386070 7.3:+27812995 MS.gene51207:CDS
GGAAATCCTGCTGAGGTTGC+CGG 0.386944 7.3:+27812954 MS.gene51207:CDS
TCTTCCTGAAGATGTGATAA+AGG 0.387148 7.3:+27812933 MS.gene51207:CDS
CTCTCTCCTATAACTGTTGC+CGG 0.391676 7.3:+27813306 MS.gene51207:CDS
TCTTGAATGGGGCTATTCAT+TGG 0.397510 7.3:+27813577 MS.gene51207:CDS
GATCTAAAATCAAAATCATC+TGG 0.416107 7.3:-27813681 None:intergenic
ACTCTGTATATACGGCCATT+TGG 0.434308 7.3:-27813995 None:intergenic
TGCATTAAAATCTATTGTTA+GGG 0.436478 7.3:-27813121 None:intergenic
GGTTTCTCTCTCGTGATAAA+CGG 0.438600 7.3:-27813974 None:intergenic
ATCGCTGTCGGCATCTATAC+CGG 0.442746 7.3:-27813325 None:intergenic
AGAGTCGGGTTGTTCTTGAA+TGG 0.443451 7.3:+27813564 MS.gene51207:CDS
ATAGTCATCATCGCATTGAT+AGG 0.460659 7.3:-27813418 None:intergenic
TGTCGTTTCCTTTAAATCAA+AGG 0.465778 7.3:-27813640 None:intergenic
ATAACCCATGCCTCTACCTA+TGG 0.469515 7.3:+27813250 MS.gene51207:CDS
ACCTCACCGGCAACCTCAGC+AGG 0.477525 7.3:-27812960 None:intergenic
GAGCAGGTAATAATCTCATA+AGG 0.480467 7.3:-27813525 None:intergenic
GGTGAGACCATTTGCAGAGC+AGG 0.483051 7.3:-27813541 None:intergenic
CTAGTTTATAACTATGAGAC+TGG 0.483134 7.3:+27813600 MS.gene51207:CDS
AAGCAGAGACTCTGTATATA+CGG 0.486825 7.3:-27814003 None:intergenic
AAACAATAGTCTTGAGGAGC+CGG 0.487443 7.3:-27813840 None:intergenic
ACAAGCTGTGGTGATGTAGT+TGG 0.488736 7.3:+27813879 MS.gene51207:CDS
AATATGCAGTGCATTCATCT+TGG 0.491707 7.3:+27813802 MS.gene51207:CDS
GGACGAAACAGTTGAGATAT+GGG 0.491745 7.3:+27813770 MS.gene51207:CDS
GATATCTAGCTCACTTGACT+TGG 0.501587 7.3:+27813446 MS.gene51207:CDS
ATTATTACCTGCTCTGCAAA+TGG 0.504484 7.3:+27813534 MS.gene51207:CDS
CAAATGGTCTCACCAGAGTC+GGG 0.510709 7.3:+27813550 MS.gene51207:CDS
GCAAATGGTCTCACCAGAGT+CGG 0.514245 7.3:+27813549 MS.gene51207:CDS
ACCGTCAACTGATGATTACT+TGG 0.516257 7.3:+27813383 MS.gene51207:CDS
TAAACTTAATCAGTGTCACT+TGG 0.517050 7.3:-27814032 None:intergenic
GATAAGCAGAATCATGATTG+AGG 0.517618 7.3:-27813146 None:intergenic
AAATGTGAATTTGCAAAATG+AGG 0.531218 7.3:-27813036 None:intergenic
TCCTGCTGAGGTTGCCGGTG+AGG 0.535788 7.3:+27812959 MS.gene51207:CDS
ATATTATAGGTTCATGTAGA+GGG 0.541395 7.3:+27813211 MS.gene51207:CDS
TCTATTGTTAGGGCTTTGAA+AGG 0.544037 7.3:-27813111 None:intergenic
GAAAATCACAAGTTTATGTG+TGG 0.546212 7.3:-27813076 None:intergenic
TACCTATGGAATCCCTCCAC+TGG 0.547529 7.3:+27813264 MS.gene51207:CDS
ATAAGCAGAATCATGATTGA+GGG 0.548392 7.3:-27813145 None:intergenic
ATTCAAGAACAACCCGACTC+TGG 0.551431 7.3:-27813562 None:intergenic
GATATTATAGGTTCATGTAG+AGG 0.556458 7.3:+27813210 MS.gene51207:CDS
TTGAAGAAGTTTAATAACAA+AGG 0.560618 7.3:+27813921 MS.gene51207:CDS
ATCACGAGAGAGAAACCAAA+TGG 0.562340 7.3:+27813980 MS.gene51207:CDS
AAAATCACAAGTTTATGTGT+GGG 0.563880 7.3:-27813075 None:intergenic
CTAGGATGCTTTACAAGCTG+TGG 0.564715 7.3:+27813867 MS.gene51207:CDS
GTAGTTGGAACAGATCTTCA+AGG 0.567449 7.3:+27813894 MS.gene51207:CDS
TGGAGGGATTCCATAGGTAG+AGG 0.567966 7.3:-27813260 None:intergenic
TTTATAACTATGAGACTGGA+AGG 0.569813 7.3:+27813604 MS.gene51207:CDS
AAACTTAATCAGTGTCACTT+GGG 0.575347 7.3:-27814031 None:intergenic
ACCAAGTAATCATCAGTTGA+CGG 0.580855 7.3:-27813384 None:intergenic
TTGTTTATTGACACCAGTGG+AGG 0.581446 7.3:-27813277 None:intergenic
TGTTTATTGACACCAGTGGA+GGG 0.582868 7.3:-27813276 None:intergenic
CTTGAGAATATAATCGCTGT+CGG 0.586330 7.3:-27813337 None:intergenic
AATGCGATGATGACTATGAT+CGG 0.595836 7.3:+27813424 MS.gene51207:CDS
ATAAACGGTGACCATAATAG+AGG 0.598685 7.3:-27813959 None:intergenic
AGTCGGGTTGTTCTTGAATG+GGG 0.602618 7.3:+27813566 MS.gene51207:CDS
ACCAATACATCAAAATCTAG+AGG 0.604826 7.3:-27813711 None:intergenic
TATTTGTTTATTGACACCAG+TGG 0.609119 7.3:-27813280 None:intergenic
AAGTTTATGTGTGGGTGATG+AGG 0.617493 7.3:-27813067 None:intergenic
CACCAGTGGAGGGATTCCAT+AGG 0.621693 7.3:-27813266 None:intergenic
GATTCCATAGGTAGAGGCAT+GGG 0.623678 7.3:-27813254 None:intergenic
GGATTCCATAGGTAGAGGCA+TGG 0.625255 7.3:-27813255 None:intergenic
GCAACAGTTATAGGAGAGAG+AGG 0.625386 7.3:-27813303 None:intergenic
CAACGAAGTACAGACCTCAC+CGG 0.646998 7.3:-27812973 None:intergenic
TTATAACTATGAGACTGGAA+GGG 0.648533 7.3:+27813605 MS.gene51207:CDS
GTTGGAACAGATCTTCAAGG+TGG 0.676978 7.3:+27813897 MS.gene51207:CDS
TGATAAAGGAAATCCTGCTG+AGG 0.709194 7.3:+27812947 MS.gene51207:CDS
ATATCAGGATCAGAACAGTG+AGG 0.781425 7.3:-27813192 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGCATTAAAATCTATTGTT+AGG - chr7.3:27813125-27813144 None:intergenic 20.0%
!! TGCATTAAAATCTATTGTTA+GGG - chr7.3:27813124-27813143 None:intergenic 20.0%
!! TTGAAGAAGTTTAATAACAA+AGG + chr7.3:27813921-27813940 MS.gene51207:CDS 20.0%
!!! TATATTCTCAAGTTTTTGTA+TGG + chr7.3:27813348-27813367 MS.gene51207:CDS 20.0%
!!! TATTATTGCCTTTGATTTAA+AGG + chr7.3:27813632-27813651 MS.gene51207:CDS 20.0%
! AAAATCACAAGTTTATGTGT+GGG - chr7.3:27813078-27813097 None:intergenic 25.0%
! AAATGTGAATTTGCAAAATG+AGG - chr7.3:27813039-27813058 None:intergenic 25.0%
! ATATTATAGGTTCATGTAGA+GGG + chr7.3:27813211-27813230 MS.gene51207:CDS 25.0%
! TAATAACTGGAAACAAATTC+AGG + chr7.3:27813488-27813507 MS.gene51207:CDS 25.0%
!! GATCTAAAATCAAAATCATC+TGG - chr7.3:27813684-27813703 None:intergenic 25.0%
!! TTTGATGTATTGGTACTTAA+TGG + chr7.3:27813720-27813739 MS.gene51207:CDS 25.0%
!!! ATGATTACTTGGTAGTTTTA+GGG + chr7.3:27813394-27813413 MS.gene51207:CDS 25.0%
ACCAATACATCAAAATCTAG+AGG - chr7.3:27813714-27813733 None:intergenic 30.0%
ATAAGCAGAATCATGATTGA+GGG - chr7.3:27813148-27813167 None:intergenic 30.0%
ATGTAGAGGGTTTCTATTAT+TGG + chr7.3:27813224-27813243 MS.gene51207:CDS 30.0%
ATTTCCTTTATCACATCTTC+AGG - chr7.3:27812940-27812959 None:intergenic 30.0%
CTACATGAACCTATAATATC+AGG - chr7.3:27813210-27813229 None:intergenic 30.0%
CTAGTTTATAACTATGAGAC+TGG + chr7.3:27813600-27813619 MS.gene51207:CDS 30.0%
GAAAATCACAAGTTTATGTG+TGG - chr7.3:27813079-27813098 None:intergenic 30.0%
GATATTATAGGTTCATGTAG+AGG + chr7.3:27813210-27813229 MS.gene51207:CDS 30.0%
TATTTGTTTATTGACACCAG+TGG - chr7.3:27813283-27813302 None:intergenic 30.0%
TCTCATTGAAAGCTAATAAC+TGG + chr7.3:27813475-27813494 MS.gene51207:CDS 30.0%
TGTTCTGATCCTGATATTAT+AGG + chr7.3:27813198-27813217 MS.gene51207:CDS 30.0%
TTATAACTATGAGACTGGAA+GGG + chr7.3:27813605-27813624 MS.gene51207:CDS 30.0%
TTTATAACTATGAGACTGGA+AGG + chr7.3:27813604-27813623 MS.gene51207:CDS 30.0%
! AGTGAAAAACAATAGTCTTG+AGG - chr7.3:27813849-27813868 None:intergenic 30.0%
! TGTCGTTTCCTTTAAATCAA+AGG - chr7.3:27813643-27813662 None:intergenic 30.0%
!! CAAGACTATTGTTTTTCACT+AGG + chr7.3:27813849-27813868 MS.gene51207:CDS 30.0%
!! GATGATTACTTGGTAGTTTT+AGG + chr7.3:27813393-27813412 MS.gene51207:CDS 30.0%
!! TCCTCTAGATTTTGATGTAT+TGG + chr7.3:27813710-27813729 MS.gene51207:CDS 30.0%
!! TTAATGGACTTATTGGTGTA+TGG + chr7.3:27813736-27813755 MS.gene51207:CDS 30.0%
!! TTGGTACTTAATGGACTTAT+TGG + chr7.3:27813729-27813748 MS.gene51207:CDS 30.0%
AACAGTGAGGCAAAAAATCA+AGG - chr7.3:27813182-27813201 None:intergenic 35.0%
AAGCAGAGACTCTGTATATA+CGG - chr7.3:27814006-27814025 None:intergenic 35.0%
AATATGCAGTGCATTCATCT+TGG + chr7.3:27813802-27813821 MS.gene51207:CDS 35.0%
AATGCGATGATGACTATGAT+CGG + chr7.3:27813424-27813443 MS.gene51207:CDS 35.0%
ACCAAGTAATCATCAGTTGA+CGG - chr7.3:27813387-27813406 None:intergenic 35.0%
ATAAACGGTGACCATAATAG+AGG - chr7.3:27813962-27813981 None:intergenic 35.0%
ATTATTACCTGCTCTGCAAA+TGG + chr7.3:27813534-27813553 MS.gene51207:CDS 35.0%
CTTGAGAATATAATCGCTGT+CGG - chr7.3:27813340-27813359 None:intergenic 35.0%
GAGCAGGTAATAATCTCATA+AGG - chr7.3:27813528-27813547 None:intergenic 35.0%
GATAAGCAGAATCATGATTG+AGG - chr7.3:27813149-27813168 None:intergenic 35.0%
TCTTCCTGAAGATGTGATAA+AGG + chr7.3:27812933-27812952 MS.gene51207:CDS 35.0%
TGGTGTATGGATTTCAGATA+TGG + chr7.3:27813749-27813768 MS.gene51207:CDS 35.0%
! ATAGTCATCATCGCATTGAT+AGG - chr7.3:27813421-27813440 None:intergenic 35.0%
! TTGGACATTTTCTATGCATC+CGG + chr7.3:27813821-27813840 MS.gene51207:CDS 35.0%
!! TCTATTGTTAGGGCTTTGAA+AGG - chr7.3:27813114-27813133 None:intergenic 35.0%
AAGTTTATGTGTGGGTGATG+AGG - chr7.3:27813070-27813089 None:intergenic 40.0%
ACCGTCAACTGATGATTACT+TGG + chr7.3:27813383-27813402 MS.gene51207:CDS 40.0%
ACTCTGTATATACGGCCATT+TGG - chr7.3:27813998-27814017 None:intergenic 40.0%
ATATCAGGATCAGAACAGTG+AGG - chr7.3:27813195-27813214 None:intergenic 40.0%
ATCACGAGAGAGAAACCAAA+TGG + chr7.3:27813980-27813999 MS.gene51207:CDS 40.0%
GCAAGTGCGTTTGTAAGTTA+TGG + chr7.3:27812995-27813014 MS.gene51207:CDS 40.0%
GGACGAAACAGTTGAGATAT+GGG + chr7.3:27813770-27813789 MS.gene51207:CDS 40.0%
GGTTTCTCTCTCGTGATAAA+CGG - chr7.3:27813977-27813996 None:intergenic 40.0%
GTAGTTGGAACAGATCTTCA+AGG + chr7.3:27813894-27813913 MS.gene51207:CDS 40.0%
TCTATACCGGCAACAGTTAT+AGG - chr7.3:27813315-27813334 None:intergenic 40.0%
TCTTGAATGGGGCTATTCAT+TGG + chr7.3:27813577-27813596 MS.gene51207:CDS 40.0%
TGATAAAGGAAATCCTGCTG+AGG + chr7.3:27812947-27812966 MS.gene51207:CDS 40.0%
TGGACGAAACAGTTGAGATA+TGG + chr7.3:27813769-27813788 MS.gene51207:CDS 40.0%
TGTTTATTGACACCAGTGGA+GGG - chr7.3:27813279-27813298 None:intergenic 40.0%
TTGTTTATTGACACCAGTGG+AGG - chr7.3:27813280-27813299 None:intergenic 40.0%
! AAACAATAGTCTTGAGGAGC+CGG - chr7.3:27813843-27813862 None:intergenic 40.0%
! GATATCTAGCTCACTTGACT+TGG + chr7.3:27813446-27813465 MS.gene51207:CDS 40.0%
ATAACCCATGCCTCTACCTA+TGG + chr7.3:27813250-27813269 MS.gene51207:CDS 45.0%
ATTCAAGAACAACCCGACTC+TGG - chr7.3:27813565-27813584 None:intergenic 45.0%
CTAGGATGCTTTACAAGCTG+TGG + chr7.3:27813867-27813886 MS.gene51207:CDS 45.0%
CTCTCTCCTATAACTGTTGC+CGG + chr7.3:27813306-27813325 MS.gene51207:CDS 45.0%
GCAACAGTTATAGGAGAGAG+AGG - chr7.3:27813306-27813325 None:intergenic 45.0%
GTTGGAACAGATCTTCAAGG+TGG + chr7.3:27813897-27813916 MS.gene51207:CDS 45.0%
! ACAAGCTGTGGTGATGTAGT+TGG + chr7.3:27813879-27813898 MS.gene51207:CDS 45.0%
! AGAGTCGGGTTGTTCTTGAA+TGG + chr7.3:27813564-27813583 MS.gene51207:CDS 45.0%
! AGTCGGGTTGTTCTTGAATG+GGG + chr7.3:27813566-27813585 MS.gene51207:CDS 45.0%
! CTGCTAGAGCACCTCTATTA+TGG + chr7.3:27813948-27813967 MS.gene51207:CDS 45.0%
! GAGTCGGGTTGTTCTTGAAT+GGG + chr7.3:27813565-27813584 MS.gene51207:CDS 45.0%
! GATTCCATAGGTAGAGGCAT+GGG - chr7.3:27813257-27813276 None:intergenic 45.0%
ATCGCTGTCGGCATCTATAC+CGG - chr7.3:27813328-27813347 None:intergenic 50.0%
CAAATGGTCTCACCAGAGTC+GGG + chr7.3:27813550-27813569 MS.gene51207:CDS 50.0%
CAACGAAGTACAGACCTCAC+CGG - chr7.3:27812976-27812995 None:intergenic 50.0%
GCAAATGGTCTCACCAGAGT+CGG + chr7.3:27813549-27813568 MS.gene51207:CDS 50.0%
GGATTCCATAGGTAGAGGCA+TGG - chr7.3:27813258-27813277 None:intergenic 50.0%
TACCTATGGAATCCCTCCAC+TGG + chr7.3:27813264-27813283 MS.gene51207:CDS 50.0%
TGGAGGGATTCCATAGGTAG+AGG - chr7.3:27813263-27813282 None:intergenic 50.0%
CACCAGTGGAGGGATTCCAT+AGG - chr7.3:27813269-27813288 None:intergenic 55.0%
GGAAATCCTGCTGAGGTTGC+CGG + chr7.3:27812954-27812973 MS.gene51207:CDS 55.0%
GGTGAGACCATTTGCAGAGC+AGG - chr7.3:27813544-27813563 None:intergenic 55.0%
ACCTCACCGGCAACCTCAGC+AGG - chr7.3:27812963-27812982 None:intergenic 65.0%
TCCTGCTGAGGTTGCCGGTG+AGG + chr7.3:27812959-27812978 MS.gene51207:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 27812913 27814049 27812913 ID=MS.gene51207
chr7.3 mRNA 27812913 27814049 27812913 ID=MS.gene51207.t1;Parent=MS.gene51207
chr7.3 exon 27812913 27814049 27812913 ID=MS.gene51207.t1.exon1;Parent=MS.gene51207.t1
chr7.3 CDS 27812913 27814049 27812913 ID=cds.MS.gene51207.t1;Parent=MS.gene51207.t1
Gene Sequence

>MS.gene51207

ATGGAGAAGAAGAAAGTGTATCTTCCTGAAGATGTGATAAAGGAAATCCTGCTGAGGTTGCCGGTGAGGTCTGTACTTCGTTGCAAGTGCGTTTGTAAGTTATGGCTTTCTATCATCTCTCGTCCTCATTTTGCAAATTCACATTTTCAACTTGCCTCATCACCCACACATAAACTTGTGATTTTCGAAGATTTTAATCCTTTCAAAGCCCTAACAATAGATTTTAATGCATCCCTCAATCATGATTCTGCTTATCATTCACTAAGCCTTGATTTTTTGCCTCACTGTTCTGATCCTGATATTATAGGTTCATGTAGAGGGTTTCTATTATTGGACTATAACCCATGCCTCTACCTATGGAATCCCTCCACTGGTGTCAATAAACAAATACCTCTCTCTCCTATAACTGTTGCCGGTATAGATGCCGACAGCGATTATATTCTCAAGTTTTTGTATGGCTTGACATATGAACCGTCAACTGATGATTACTTGGTAGTTTTAGGGTCCTATCAATGCGATGATGACTATGATCGGATATCTAGCTCACTTGACTTGGAGATTTTCTCATTGAAAGCTAATAACTGGAAACAAATTCAGGTTGCTTCTCACTTTCCTTATGAGATTATTACCTGCTCTGCAAATGGTCTCACCAGAGTCGGGTTGTTCTTGAATGGGGCTATTCATTGGCTAGTTTATAACTATGAGACTGGAAGGGATGTTATTATTGCCTTTGATTTAAAGGAAACGACAATGTCAGAGATAGCTCTTCCAGATGATTTTGATTTTAGATCTGTTTCTCCTCTAGATTTTGATGTATTGGTACTTAATGGACTTATTGGTGTATGGATTTCAGATATGGACGAAACAGTTGAGATATGGGTGATGCAAGAATATGCAGTGCATTCATCTTGGACATTTTCTATGCATCCGGCTCCTCAAGACTATTGTTTTTCACTAGGATGCTTTACAAGCTGTGGTGATGTAGTTGGAACAGATCTTCAAGGTGGATTGAAGAAGTTTAATAACAAAGGACAGCTGCTAGAGCACCTCTATTATGGTCACCGTTTATCACGAGAGAGAAACCAAATGGCCGTATATACAGAGTCTCTGCTTTCACTCCCAAGTGACACTGATTAA

Protein sequence

>MS.gene51207.t1

MEKKKVYLPEDVIKEILLRLPVRSVLRCKCVCKLWLSIISRPHFANSHFQLASSPTHKLVIFEDFNPFKALTIDFNASLNHDSAYHSLSLDFLPHCSDPDIIGSCRGFLLLDYNPCLYLWNPSTGVNKQIPLSPITVAGIDADSDYILKFLYGLTYEPSTDDYLVVLGSYQCDDDYDRISSSLDLEIFSLKANNWKQIQVASHFPYEIITCSANGLTRVGLFLNGAIHWLVYNYETGRDVIIAFDLKETTMSEIALPDDFDFRSVSPLDFDVLVLNGLIGVWISDMDETVEIWVMQEYAVHSSWTFSMHPAPQDYCFSLGCFTSCGDVVGTDLQGGLKKFNNKGQLLEHLYYGHRLSRERNQMAVYTESLLSLPSDTD