AlfalfaGEDB | MS.gene019504

M. sativa cultivar XinJiangDaYe / MS.gene019504

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene019504.t1	AET02110.2	82.3	130	23	0	1	130	235	364	4.00E-54	220.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene019504.t1	G7LCP3	82.3	130	23	0	1	130	235	364	2.9e-54	220.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene019504	MS.gene58240	PPI
MS.gene019504	MS.gene27284	PPI
MS.gene019504	MS.gene96448	PPI
MS.gene019504	MS.gene57717	PPI
MS.gene019504	MS.gene48221	PPI
MS.gene019504	MS.gene50327	PPI
MS.gene019504	MS.gene066626	PPI
MS.gene019504	MS.gene063474	PPI
MS.gene019504	MS.gene51190	PPI
MS.gene50298	MS.gene019504	PPI
MS.gene019504	MS.gene041470	PPI
MS.gene019504	MS.gene58319	PPI
MS.gene019504	MS.gene009883	PPI
MS.gene019504	MS.gene71159	PPI
MS.gene019504	MS.gene58785	PPI
MS.gene019504	MS.gene044426	PPI
MS.gene019504	MS.gene034681	PPI
MS.gene019504	MS.gene033441	PPI
MS.gene019504	MS.gene57532	PPI
MS.gene019504	MS.gene033442	PPI
MS.gene019504	MS.gene019506	PPI
MS.gene019504	MS.gene57535	PPI
MS.gene019504	MS.gene87559	PPI
MS.gene019504	MS.gene44428	PPI
MS.gene019504	MS.gene058669	PPI
MS.gene019504	MS.gene066120	PPI
MS.gene019504	MS.gene063826	PPI
MS.gene69309	MS.gene019504	PPI
MS.gene019504	MS.gene035235	PPI
MS.gene019504	MS.gene033432	PPI
MS.gene019504	MS.gene041489	PPI
MS.gene019504	MS.gene57528	PPI
MS.gene019504	MS.gene045476	PPI
MS.gene019504	MS.gene87588	PPI
MS.gene019504	MS.gene024000	PPI
MS.gene019504	MS.gene034688	PPI
MS.gene019504	MS.gene43796	PPI
MS.gene019504	MS.gene24213	PPI
MS.gene019504	MS.gene31637	PPI
MS.gene019504	MS.gene059096	PPI
MS.gene019504	MS.gene58313	PPI
MS.gene019504	MS.gene033079	PPI
MS.gene019504	MS.gene034677	PPI
MS.gene019504	MS.gene055694	PPI
MS.gene019504	MS.gene059101	PPI
MS.gene019504	MS.gene035236	PPI
MS.gene019504	MS.gene58316	PPI
MS.gene019504	MS.gene033430	PPI
MS.gene019504	MS.gene87584	PPI
MS.gene019504	MS.gene58321	PPI
MS.gene019504	MS.gene016524	PPI
MS.gene019504	MS.gene87564	PPI
MS.gene019504	MS.gene58315	PPI
MS.gene019504	MS.gene011679	PPI
MS.gene019504	MS.gene90743	PPI
MS.gene019504	MS.gene85454	PPI
MS.gene019504	MS.gene064112	PPI
MS.gene51202	MS.gene019504	PPI
MS.gene019504	MS.gene036556	PPI
MS.gene019504	MS.gene57538	PPI
MS.gene019504	MS.gene060367	PPI
MS.gene019504	MS.gene058693	PPI
MS.gene019504	MS.gene27319	PPI
MS.gene019504	MS.gene006711	PPI
MS.gene019504	MS.gene26957	PPI
MS.gene019504	MS.gene57536	PPI
MS.gene019504	MS.gene50307	PPI
MS.gene064111	MS.gene019504	PPI
MS.gene019504	MS.gene51200	PPI
MS.gene019504	MS.gene066641	PPI
MS.gene019504	MS.gene021553	PPI
MS.gene019504	MS.gene44887	PPI
MS.gene019504	MS.gene064083	PPI
MS.gene019504	MS.gene066635	PPI
MS.gene019504	MS.gene90744	PPI
MS.gene019504	MS.gene58312	PPI
MS.gene019504	MS.gene58783	PPI
MS.gene019504	MS.gene82082	PPI
MS.gene019504	MS.gene58722	PPI
MS.gene019504	MS.gene024420	PPI
MS.gene019504	MS.gene57533	PPI
MS.gene019504	MS.gene44885	PPI
MS.gene019504	MS.gene036760	PPI
MS.gene019504	MS.gene50337	PPI
MS.gene006710	MS.gene019504	PPI
MS.gene019504	MS.gene27283	PPI
MS.gene019504	MS.gene54541	PPI
MS.gene019504	MS.gene39265	PPI
MS.gene58722	MS.gene019504	PPI
MS.gene019504	MS.gene036584	PPI
MS.gene019504	MS.gene036662	PPI
MS.gene019504	MS.gene060368	PPI
MS.gene019504	MS.gene58311	PPI
MS.gene019504	MS.gene053299	PPI
MS.gene019504	MS.gene000035	PPI
MS.gene019504	MS.gene28758	PPI
MS.gene019504	MS.gene044429	PPI
MS.gene019504	MS.gene42451	PPI
MS.gene43796	MS.gene019504	PPI
MS.gene019504	MS.gene066620	PPI
MS.gene019504	MS.gene50304	PPI
MS.gene019504	MS.gene041388	PPI
MS.gene019504	MS.gene019503	PPI
MS.gene019504	MS.gene063414	PPI
MS.gene019504	MS.gene69307	PPI
MS.gene58313	MS.gene019504	PPI
MS.gene019504	MS.gene019507	PPI
MS.gene019504	MS.gene033431	PPI
MS.gene019504	MS.gene51204	PPI
MS.gene066622	MS.gene019504	PPI
MS.gene019504	MS.gene058692	PPI
MS.gene44883	MS.gene019504	PPI
MS.gene019504	MS.gene034762	PPI
MS.gene019504	MS.gene59943	PPI
MS.gene019504	MS.gene58314	PPI
MS.gene017412	MS.gene019504	PPI
MS.gene019504	MS.gene67501	PPI
MS.gene019504	MS.gene96406	PPI
MS.gene019504	MS.gene27285	PPI
MS.gene019504	MS.gene035262	PPI
MS.gene019504	MS.gene77857	PPI
MS.gene019504	MS.gene060366	PPI
MS.gene019504	MS.gene028390	PPI
MS.gene009883	MS.gene019504	PPI
MS.gene019504	MS.gene40878	PPI
MS.gene019504	MS.gene27020	PPI
MS.gene019504	MS.gene96407	PPI
MS.gene019504	MS.gene058694	PPI
MS.gene019504	MS.gene069075	PPI
MS.gene019504	MS.gene051820	PPI
MS.gene019504	MS.gene058703	PPI
MS.gene019504	MS.gene50329	PPI
MS.gene031591	MS.gene019504	PPI
MS.gene019504	MS.gene047279	PPI
MS.gene019504	MS.gene060370	PPI
MS.gene019504	MS.gene024002	PPI
MS.gene019504	MS.gene012215	PPI
MS.gene019504	MS.gene032969	PPI
MS.gene019504	MS.gene041392	PPI
MS.gene019504	MS.gene50297	PPI
MS.gene019504	MS.gene42445	PPI
MS.gene96126	MS.gene019504	PPI
MS.gene019504	MS.gene26830	PPI
MS.gene019504	MS.gene22715	PPI
MS.gene019504	MS.gene033444	PPI
MS.gene019504	MS.gene000038	PPI
MS.gene019504	MS.gene038756	PPI
MS.gene019504	MS.gene51207	PPI
MS.gene019504	MS.gene017412	PPI
MS.gene019504	MS.gene36595	PPI
MS.gene51204	MS.gene019504	PPI
MS.gene019504	MS.gene024004	PPI
MS.gene019504	MS.gene045140	PPI
MS.gene036557	MS.gene019504	PPI
MS.gene019504	MS.gene50298	PPI
MS.gene019504	MS.gene061240	PPI
MS.gene019504	MS.gene041473	PPI
MS.gene063826	MS.gene019504	PPI
MS.gene019504	MS.gene50311	PPI
MS.gene019504	MS.gene88780	PPI
MS.gene019504	MS.gene035234	PPI
MS.gene019504	MS.gene058989	PPI
MS.gene44892	MS.gene019504	PPI
MS.gene019504	MS.gene50326	PPI
MS.gene019504	MS.gene041468	PPI
MS.gene019504	MS.gene034686	PPI
MS.gene82082	MS.gene019504	PPI
MS.gene019504	MS.gene64001	PPI
MS.gene019504	MS.gene015089	PPI
MS.gene019504	MS.gene041395	PPI
MS.gene000038	MS.gene019504	PPI
MS.gene019504	MS.gene041491	PPI
MS.gene019504	MS.gene42447	PPI
MS.gene019504	MS.gene51189	PPI
MS.gene019504	MS.gene43789	PPI
MS.gene019504	MS.gene046958	PPI
MS.gene57535	MS.gene019504	PPI
MS.gene019504	MS.gene066622	PPI
MS.gene019504	MS.gene24286	PPI
MS.gene019504	MS.gene044425	PPI
MS.gene019504	MS.gene57537	PPI
MS.gene019504	MS.gene87573	PPI
MS.gene019504	MS.gene064104	PPI
MS.gene019504	MS.gene40988	PPI
MS.gene019504	MS.gene81242	PPI
MS.gene019504	MS.gene59637	PPI
MS.gene019504	MS.gene24173	PPI
MS.gene44885	MS.gene019504	PPI
MS.gene011679	MS.gene019504	PPI
MS.gene019504	MS.gene033426	PPI
MS.gene019504	MS.gene27022	PPI
MS.gene019504	MS.gene88776	PPI
MS.gene019504	MS.gene35068	PPI
MS.gene019504	MS.gene035261	PPI
MS.gene019504	MS.gene87585	PPI
MS.gene019504	MS.gene041390	PPI
MS.gene019504	MS.gene023999	PPI
MS.gene019504	MS.gene070461	PPI
MS.gene019504	MS.gene036599	PPI
MS.gene019504	MS.gene87200	PPI
MS.gene019504	MS.gene42444	PPI
MS.gene019504	MS.gene80884	PPI
MS.gene019504	MS.gene59639	PPI
MS.gene019504	MS.gene036581	PPI
MS.gene019504	MS.gene035237	PPI
MS.gene019504	MS.gene000036	PPI
MS.gene019504	MS.gene44886	PPI
MS.gene019504	MS.gene50309	PPI
MS.gene019504	MS.gene50320	PPI
MS.gene019504	MS.gene87557	PPI
MS.gene019504	MS.gene059156	PPI
MS.gene019504	MS.gene51199	PPI
MS.gene019504	MS.gene035263	PPI
MS.gene019504	MS.gene006710	PPI
MS.gene019504	MS.gene036664	PPI
MS.gene019504	MS.gene053257	PPI
MS.gene019504	MS.gene77858	PPI
MS.gene019504	MS.gene51201	PPI
MS.gene019504	MS.gene009893	PPI
MS.gene019504	MS.gene045475	PPI
MS.gene019504	MS.gene50336	PPI
MS.gene019504	MS.gene57526	PPI
MS.gene019504	MS.gene87586	PPI
MS.gene019504	MS.gene77704	PPI
MS.gene019504	MS.gene064091	PPI
MS.gene019504	MS.gene96126	PPI
MS.gene019504	MS.gene50305	PPI
MS.gene27020	MS.gene019504	PPI
MS.gene066620	MS.gene019504	PPI
MS.gene019504	MS.gene75875	PPI
MS.gene019504	MS.gene68890	PPI
MS.gene019504	MS.gene60027	PPI
MS.gene019504	MS.gene033081	PPI
MS.gene019504	MS.gene86273	PPI
MS.gene019504	MS.gene036663	PPI
MS.gene019504	MS.gene68580	PPI
MS.gene019504	MS.gene40985	PPI
MS.gene019504	MS.gene072177	PPI
MS.gene019504	MS.gene92376	PPI
MS.gene019504	MS.gene58781	PPI
MS.gene019504	MS.gene57525	PPI
MS.gene019504	MS.gene57529	PPI
MS.gene019504	MS.gene63657	PPI
MS.gene019504	MS.gene059157	PPI
MS.gene019504	MS.gene023996	PPI
MS.gene019504	MS.gene031591	PPI
MS.gene019504	MS.gene030114	PPI
MS.gene019504	MS.gene57527	PPI
MS.gene019504	MS.gene58716	PPI
MS.gene019504	MS.gene045473	PPI
MS.gene000035	MS.gene019504	PPI
MS.gene019504	MS.gene50301	PPI
MS.gene019504	MS.gene87569	PPI
MS.gene019504	MS.gene070462	PPI
MS.gene019504	MS.gene88774	PPI
MS.gene019504	MS.gene54049	PPI
MS.gene019504	MS.gene036582	PPI
MS.gene87573	MS.gene019504	PPI
MS.gene019504	MS.gene031590	PPI
MS.gene019504	MS.gene44883	PPI
MS.gene019504	MS.gene033427	PPI
MS.gene019504	MS.gene066623	PPI
MS.gene019504	MS.gene064086	PPI
MS.gene019504	MS.gene064090	PPI
MS.gene019504	MS.gene24208	PPI
MS.gene019504	MS.gene58317	PPI
MS.gene019504	MS.gene90742	PPI
MS.gene019504	MS.gene41046	PPI
MS.gene019504	MS.gene24212	PPI
MS.gene019504	MS.gene51191	PPI
MS.gene019504	MS.gene066639	PPI
MS.gene019504	MS.gene50332	PPI
MS.gene019504	MS.gene77856	PPI
MS.gene019504	MS.gene024979	PPI
MS.gene019504	MS.gene40902	PPI
MS.gene019504	MS.gene041475	PPI
MS.gene019504	MS.gene64203	PPI
MS.gene26949	MS.gene019504	PPI
MS.gene019504	MS.gene24826	PPI
MS.gene019504	MS.gene40904	PPI
MS.gene019504	MS.gene063472	PPI
MS.gene019504	MS.gene025887	PPI
MS.gene019504	MS.gene43790	PPI
MS.gene019504	MS.gene034680	PPI
MS.gene019504	MS.gene31587	PPI
MS.gene019504	MS.gene032970	PPI
MS.gene019504	MS.gene27021	PPI
MS.gene019504	MS.gene51208	PPI
MS.gene019504	MS.gene044563	PPI
MS.gene019504	MS.gene40982	PPI
MS.gene019504	MS.gene50339	PPI
MS.gene019504	MS.gene42452	PPI
MS.gene019504	MS.gene88416	PPI
MS.gene019504	MS.gene57530	PPI
MS.gene019504	MS.gene84698	PPI
MS.gene019504	MS.gene97996	PPI
MS.gene019504	MS.gene003076	PPI
MS.gene019504	MS.gene024009	PPI
MS.gene019504	MS.gene40887	PPI
MS.gene019504	MS.gene009892	PPI
MS.gene019504	MS.gene67687	PPI
MS.gene019504	MS.gene62398	PPI
MS.gene019504	MS.gene44892	PPI
MS.gene019504	MS.gene26101	PPI
MS.gene019506	MS.gene019504	PPI
MS.gene019504	MS.gene006705	PPI
MS.gene019504	MS.gene061241	PPI
MS.gene019504	MS.gene51192	PPI
MS.gene019504	MS.gene51188	PPI
MS.gene019504	MS.gene033875	PPI
MS.gene019504	MS.gene38220	PPI
MS.gene019504	MS.gene40986	PPI
MS.gene019504	MS.gene36704	PPI
MS.gene019504	MS.gene041394	PPI
MS.gene019504	MS.gene58239	PPI
MS.gene019504	MS.gene03060	PPI
MS.gene019504	MS.gene033440	PPI
MS.gene019504	MS.gene024011	PPI
MS.gene019504	MS.gene58241	PPI
MS.gene019504	MS.gene010758	PPI
MS.gene063414	MS.gene019504	PPI
MS.gene019504	MS.gene064109	PPI
MS.gene019504	MS.gene058696	PPI
MS.gene019504	MS.gene63655	PPI
MS.gene019504	MS.gene035238	PPI
MS.gene019504	MS.gene39262	PPI
MS.gene019504	MS.gene85043	PPI
MS.gene019504	MS.gene064114	PPI
MS.gene019504	MS.gene87563	PPI
MS.gene019504	MS.gene019505	PPI
MS.gene019504	MS.gene062698	PPI
MS.gene019504	MS.gene26829	PPI
MS.gene019504	MS.gene58320	PPI
MS.gene019504	MS.gene80610	PPI
MS.gene26957	MS.gene019504	PPI
MS.gene019504	MS.gene033083	PPI
MS.gene019504	MS.gene26949	PPI
MS.gene019504	MS.gene036557	PPI
MS.gene019504	MS.gene053256	PPI
MS.gene019504	MS.gene63658	PPI
MS.gene019504	MS.gene40886	PPI
MS.gene58781	MS.gene019504	PPI
MS.gene019504	MS.gene041391	PPI
MS.gene87588	MS.gene019504	PPI
MS.gene019504	MS.gene033443	PPI
MS.gene019504	MS.gene036583	PPI
MS.gene019504	MS.gene51202	PPI
MS.gene87569	MS.gene019504	PPI
MS.gene019504	MS.gene045474	PPI
MS.gene019504	MS.gene011106	PPI
MS.gene019504	MS.gene058701	PPI
MS.gene019504	MS.gene036558	PPI
MS.gene019504	MS.gene041474	PPI
MS.gene041491	MS.gene019504	PPI
MS.gene019504	MS.gene87554	PPI
MS.gene019504	MS.gene009891	PPI
MS.gene019504	MS.gene27051	PPI
MS.gene019504	MS.gene40984	PPI
MS.gene019504	MS.gene064108	PPI
MS.gene019504	MS.gene048193	PPI
MS.gene019504	MS.gene87562	PPI
MS.gene059096	MS.gene019504	PPI
MS.gene019504	MS.gene016220	PPI
MS.gene019504	MS.gene024008	PPI
MS.gene019504	MS.gene063670	PPI
MS.gene019504	MS.gene50306	PPI
MS.gene019504	MS.gene041393	PPI
MS.gene019504	MS.gene69309	PPI
MS.gene019504	MS.gene064111	PPI
MS.gene034690	MS.gene019504	PPI
MS.gene019504	MS.gene034690	PPI
MS.gene019504	MS.gene57531	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene019504.t1	MTR_8g433040	82.308	130	23	0	1	130	235	364	3.54e-70	214
MS.gene019504.t1	MTR_8g032380	82.308	130	23	0	1	130	235	364	3.54e-70	214
MS.gene019504.t1	MTR_8g433030	79.200	125	25	1	1	124	212	336	6.92e-65	200
MS.gene019504.t1	MTR_8g032390	79.200	125	25	1	1	124	245	369	1.53e-64	200
MS.gene019504.t1	MTR_4g094365	64.925	134	43	2	1	130	231	364	5.84e-50	162
MS.gene019504.t1	MTR_3g103020	63.433	134	44	3	1	130	246	378	1.72e-49	162
MS.gene019504.t1	MTR_4g109270	60.448	134	48	3	1	130	232	364	1.83e-46	154
MS.gene019504.t1	MTR_4g116320	61.538	130	45	2	1	126	126	254	2.96e-45	147
MS.gene019504.t1	MTR_6g060650	58.647	133	48	4	1	129	243	372	8.81e-44	147
MS.gene019504.t1	MTR_4g122850	62.687	134	45	4	1	130	232	364	1.57e-43	146
MS.gene019504.t1	MTR_5g097210	60.156	128	47	2	2	127	235	360	2.06e-42	143
MS.gene019504.t1	MTR_4g117720	58.647	133	43	4	1	124	242	371	4.60e-42	142
MS.gene019504.t1	MTR_8g040935	56.716	134	53	2	2	130	75	208	8.75e-42	137
MS.gene019504.t1	MTR_4g109280	58.824	136	46	6	1	130	228	359	1.60e-41	140
MS.gene019504.t1	MTR_4g116330	56.296	135	54	2	1	130	246	380	1.64e-41	141
MS.gene019504.t1	MTR_1g055175	53.788	132	57	2	1	129	70	200	1.83e-41	136
MS.gene019504.t1	MTR_4g023130	58.015	131	51	3	1	129	184	312	1.03e-39	135
MS.gene019504.t1	MTR_3g034180	58.647	133	49	4	1	130	360	489	1.14e-39	138
MS.gene019504.t1	MTR_1g055165	53.383	133	58	2	1	130	187	318	1.88e-39	134
MS.gene019504.t1	MTR_4g117850	56.693	127	49	3	2	123	248	373	7.62e-39	134
MS.gene019504.t1	MTR_4g023080	55.725	131	54	3	1	129	225	353	1.08e-38	133
MS.gene019504.t1	MTR_4g021785	54.545	132	56	3	1	130	226	355	3.11e-38	132
MS.gene019504.t1	MTR_4g023380	51.282	156	49	5	1	130	225	379	1.90e-37	130
MS.gene019504.t1	MTR_4g118370	53.488	129	55	3	1	127	132	257	7.42e-37	126
MS.gene019504.t1	MTR_6g463430	53.383	133	55	4	1	130	74	202	1.16e-36	124
MS.gene019504.t1	MTR_4g023090	52.857	140	49	5	1	124	240	378	1.40e-36	128
MS.gene019504.t1	MTR_4g118360	55.469	128	48	5	8	129	1	125	1.58e-36	121
MS.gene019504.t1	MTR_1g055135	51.825	137	57	4	1	130	241	375	4.72e-36	127
MS.gene019504.t1	MTR_4g023070	51.049	143	54	3	2	129	228	369	1.03e-35	126
MS.gene019504.t1	MTR_4g117870	52.344	128	58	2	5	130	141	267	2.87e-35	122
MS.gene019504.t1	MTR_5g070130	54.264	129	53	4	1	124	243	370	6.94e-35	124
MS.gene019504.t1	MTR_1g055195	54.545	132	45	5	1	124	348	472	7.98e-35	125
MS.gene019504.t1	MTR_5g070080	54.331	127	52	4	2	124	255	379	2.04e-34	123
MS.gene019504.t1	MTR_1g055250	49.624	133	61	3	2	130	140	270	5.88e-33	118
MS.gene019504.t1	MTR_4g023120	48.611	144	58	3	2	130	228	370	1.53e-32	117
MS.gene019504.t1	MTR_3g034160	56.489	131	53	3	1	129	246	374	1.65e-32	117
MS.gene019504.t1	MTR_4g118380	57.895	114	34	4	1	103	245	355	5.35e-32	116
MS.gene019504.t1	MTR_3g034130	54.167	120	50	3	1	117	246	363	6.99e-32	115
MS.gene019504.t1	MTR_4g117750	54.386	114	49	2	18	128	368	481	7.61e-32	117
MS.gene019504.t1	MTR_4g117750	48.624	109	51	3	23	129	253	358	7.96e-24	95.5
MS.gene019504.t1	MTR_4g117780	55.357	112	47	2	22	130	256	367	1.04e-31	115
MS.gene019504.t1	MTR_4g117770	55.357	112	47	2	22	130	256	367	1.28e-31	115
MS.gene019504.t1	MTR_4g117810	55.357	112	47	2	22	130	256	367	1.28e-31	115
MS.gene019504.t1	MTR_4g023190	52.206	136	54	4	1	128	225	357	1.38e-31	115
MS.gene019504.t1	MTR_5g023000	59.596	99	37	2	35	130	1	99	9.52e-31	106
MS.gene019504.t1	MTR_4g023150	50.000	136	57	4	1	128	226	358	1.64e-29	109
MS.gene019504.t1	MTR_4g023200	49.265	136	58	4	1	128	226	358	6.59e-29	107
MS.gene019504.t1	MTR_4g122860	50.000	128	54	4	10	130	196	320	2.90e-28	105
MS.gene019504.t1	MTR_5g070088	47.407	135	66	4	1	130	252	386	5.11e-28	105
MS.gene019504.t1	MTR_4g116330	53.097	113	48	2	23	130	229	341	7.64e-28	104
MS.gene019504.t1	MTR_4g117530	49.153	118	56	3	14	130	139	253	3.37e-27	101
MS.gene019504.t1	MTR_4g023440	61.957	92	32	2	41	130	242	332	3.60e-27	102
MS.gene019504.t1	MTR_4g121580	50.847	118	49	3	4	120	230	339	3.87e-27	103
MS.gene019504.t1	MTR_7g079400	46.377	138	62	5	2	130	203	337	1.03e-26	101
MS.gene019504.t1	MTR_8g102520	44.030	134	67	4	2	130	192	322	4.27e-25	97.4
MS.gene019504.t1	MTR_4g118400	49.219	128	44	6	2	124	183	294	7.04e-24	93.6
MS.gene019504.t1	MTR_7g079450	41.912	136	63	5	2	130	11	137	2.43e-23	88.6
MS.gene019504.t1	MTR_7g079370	44.882	127	63	4	2	124	227	350	3.50e-21	87.4
MS.gene019504.t1	MTR_8g098830	43.200	125	63	5	2	124	97	215	3.66e-21	85.1
MS.gene019504.t1	MTR_4g023430	46.667	105	48	3	33	130	119	222	9.27e-21	84.0
MS.gene019504.t1	MTR_7g117720	56.322	87	29	4	46	124	186	271	8.12e-18	77.0
MS.gene019504.t1	MTR_4g114700	50.000	88	38	3	40	121	131	218	1.47e-17	75.9
MS.gene019504.t1	MTR_4g122840	41.085	129	39	4	5	130	170	264	1.66e-17	76.3
MS.gene019504.t1	MTR_7g079420	37.500	136	72	6	2	129	1013	1143	1.36e-15	72.4
MS.gene019504.t1	MTR_4g023100	52.941	68	29	1	63	130	55	119	3.42e-13	62.0
MS.gene019504.t1	MTR_8g013005	59.649	57	21	1	76	130	3	59	5.72e-13	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 30 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACCATGATCCTAAGTATTA+TGG	0.203715	8.1:-69742968	MS.gene019504:CDS
TATTATGGTTTGTGGGTATT+TGG	0.206725	8.1:-69742953	MS.gene019504:CDS
ATAATCCGGCACTTGAAATA+TGG	0.211797	8.1:-69742898	MS.gene019504:CDS
TTGGAGAATTTCTCAGTCTA+TGG	0.288501	8.1:-69742934	MS.gene019504:CDS
ATGGCCACTTCAAATGCCTT+TGG	0.385262	8.1:+69742689	None:intergenic
CAAGGTATGTCATTGTCAAT+AGG	0.400804	8.1:+69742824	None:intergenic
GGATCATGGTTGAAATCATC+TGG	0.411154	8.1:+69742980	None:intergenic
ATCCTAAGTATTATGGTTTG+TGG	0.419854	8.1:-69742961	MS.gene019504:CDS
TAATCCGGCACTTGAAATAT+GGG	0.448185	8.1:-69742897	MS.gene019504:CDS
ATCACCCATATTTCAAGTGC+CGG	0.473975	8.1:+69742893	None:intergenic
AGTGGTGATATTATTGGAAC+TGG	0.479168	8.1:-69742776	MS.gene019504:CDS
AATACAAACTGAAATCATCT+TGG	0.480922	8.1:-69742865	MS.gene019504:CDS
TCCTAAGTATTATGGTTTGT+GGG	0.484785	8.1:-69742960	MS.gene019504:CDS
AACCATAATACTTAGGATCA+TGG	0.502897	8.1:+69742966	None:intergenic
CTATTGACAATGACATACCT+TGG	0.516935	8.1:-69742823	MS.gene019504:CDS
TTGTCTTTGATTTAATGGAA+AGG	0.526787	8.1:-69743024	None:intergenic
AATAGGAATTACAAGAGTCT+TGG	0.534099	8.1:+69742841	None:intergenic
ATTGGAACTGGTGGTCGTCA+TGG	0.541567	8.1:-69742764	MS.gene019504:CDS
AACTGGTGGTCGTCATGGAT+TGG	0.553570	8.1:-69742759	MS.gene019504:CDS
ACCCACAAACCATAATACTT+AGG	0.570029	8.1:+69742959	None:intergenic
TGGTTGAAATCATCTGGAAG+AGG	0.588065	8.1:+69742986	None:intergenic
CATCTTGTTAAACTTGCTCA+CGG	0.601761	8.1:+69742633	None:intergenic
AAGCAGAGACTCTTTATACA+TGG	0.605588	8.1:+69742670	None:intergenic
GAATCCAAAGGCATTTGAAG+TGG	0.606386	8.1:-69742693	MS.gene019504:CDS
GCATCTCAAAATGAATCCAA+AGG	0.611920	8.1:-69742705	MS.gene019504:CDS
TAAACTTGCTCACGGTCACG+AGG	0.626552	8.1:+69742641	None:intergenic
TTGGTGAAGTATAATAACAA+AGG	0.635362	8.1:-69742740	MS.gene019504:CDS
GGTGATATTATTGGAACTGG+TGG	0.680138	8.1:-69742773	MS.gene019504:CDS
AAACTTGCTCACGGTCACGA+GGG	0.700858	8.1:+69742642	None:intergenic
GAGTATATAGGGGAAAACCA+AGG	0.732405	8.1:+69742806	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GAATATGAATTTTCATAATC+CGG	-	chr8.1:69742738-69742757	MS.gene019504:CDS	20.0%
!	AATACAAACTGAAATCATCT+TGG	-	chr8.1:69742785-69742804	MS.gene019504:CDS	25.0%
!	ACAAAAAGTGGTGATATTAT+TGG	-	chr8.1:69742868-69742887	MS.gene019504:CDS	25.0%
!	TTGGTGAAGTATAATAACAA+AGG	-	chr8.1:69742910-69742929	MS.gene019504:CDS	25.0%
!!	ACTTTTTGTAGAGTATATAG+GGG	+	chr8.1:69742857-69742876	None:intergenic	25.0%
!!!	CACTTTTTGTAGAGTATATA+GGG	+	chr8.1:69742858-69742877	None:intergenic	25.0%
	AACCATAATACTTAGGATCA+TGG	+	chr8.1:69742687-69742706	None:intergenic	30.0%
	AACCATGATCCTAAGTATTA+TGG	-	chr8.1:69742682-69742701	MS.gene019504:CDS	30.0%
	AATAGGAATTACAAGAGTCT+TGG	+	chr8.1:69742812-69742831	None:intergenic	30.0%
	ATCCTAAGTATTATGGTTTG+TGG	-	chr8.1:69742689-69742708	MS.gene019504:CDS	30.0%
	CCTATATACTCTACAAAAAG+TGG	-	chr8.1:69742856-69742875	MS.gene019504:CDS	30.0%
!	TATTATGGTTTGTGGGTATT+TGG	-	chr8.1:69742697-69742716	MS.gene019504:CDS	30.0%
!	TCCTAAGTATTATGGTTTGT+GGG	-	chr8.1:69742690-69742709	MS.gene019504:CDS	30.0%
!!!	CCACTTTTTGTAGAGTATAT+AGG	+	chr8.1:69742859-69742878	None:intergenic	30.0%
	AAGCAGAGACTCTTTATACA+TGG	+	chr8.1:69742983-69743002	None:intergenic	35.0%
	ACCCACAAACCATAATACTT+AGG	+	chr8.1:69742694-69742713	None:intergenic	35.0%
	AGTGGTGATATTATTGGAAC+TGG	-	chr8.1:69742874-69742893	MS.gene019504:CDS	35.0%
	ATAATCCGGCACTTGAAATA+TGG	-	chr8.1:69742752-69742771	MS.gene019504:CDS	35.0%
	CAAGGTATGTCATTGTCAAT+AGG	+	chr8.1:69742829-69742848	None:intergenic	35.0%
	CTATTGACAATGACATACCT+TGG	-	chr8.1:69742827-69742846	MS.gene019504:CDS	35.0%
	GCATCTCAAAATGAATCCAA+AGG	-	chr8.1:69742945-69742964	MS.gene019504:CDS	35.0%
	TAATCCGGCACTTGAAATAT+GGG	-	chr8.1:69742753-69742772	MS.gene019504:CDS	35.0%
	TTGGAGAATTTCTCAGTCTA+TGG	-	chr8.1:69742716-69742735	MS.gene019504:CDS	35.0%
	GAGTATATAGGGGAAAACCA+AGG	+	chr8.1:69742847-69742866	None:intergenic	40.0%
	GGATCATGGTTGAAATCATC+TGG	+	chr8.1:69742673-69742692	None:intergenic	40.0%
	GGTGATATTATTGGAACTGG+TGG	-	chr8.1:69742877-69742896	MS.gene019504:CDS	40.0%
	TGGTTGAAATCATCTGGAAG+AGG	+	chr8.1:69742667-69742686	None:intergenic	40.0%
!	ATCACCCATATTTCAAGTGC+CGG	+	chr8.1:69742760-69742779	None:intergenic	40.0%
!!	GAATCCAAAGGCATTTGAAG+TGG	-	chr8.1:69742957-69742976	MS.gene019504:CDS	40.0%
	ATGGCCACTTCAAATGCCTT+TGG	+	chr8.1:69742964-69742983	None:intergenic	45.0%
	AACTGGTGGTCGTCATGGAT+TGG	-	chr8.1:69742891-69742910	MS.gene019504:CDS	50.0%
	ATTGGAACTGGTGGTCGTCA+TGG	-	chr8.1:69742886-69742905	MS.gene019504:CDS	50.0%
!	AAACTTGCTCACGGTCACGA+GGG	+	chr8.1:69743011-69743030	None:intergenic	50.0%
!	TAAACTTGCTCACGGTCACG+AGG	+	chr8.1:69743012-69743031	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	69742640	69743032	69742640	ID=MS.gene019504
chr8.1	mRNA	69742640	69743032	69742640	ID=MS.gene019504.t1;Parent=MS.gene019504
chr8.1	exon	69742640	69743032	69742640	ID=MS.gene019504.t1.exon1;Parent=MS.gene019504.t1
chr8.1	CDS	69742640	69743032	69742640	ID=cds.MS.gene019504.t1;Parent=MS.gene019504.t1

Gene Sequence

>MS.gene019504

ATGGAAAGGAAACTGTTAGAGATACCTCTTCCAGATGATTTCAACCATGATCCTAAGTATTATGGTTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGAATATGAATTTTCATAATCCGGCACTTGAAATATGGGTGATGAAAGAATACAAACTGAAATCATCTTGGACCAAGACTCTTGTAATTCCTATTGACAATGACATACCTTGGTTTTCCCCTATATACTCTACAAAAAGTGGTGATATTATTGGAACTGGTGGTCGTCATGGATTGGTGAAGTATAATAACAAAGGACAACTTTTAGAGCATCTCAAAATGAATCCAAAGGCATTTGAAGTGGCCATGTATAAAGAGTCTCTGCTTTCACTCCCTCGTGACCGTGAGCAAGTTTAA

Protein sequence

>MS.gene019504.t1

MERKLLEIPLPDDFNHDPKYYGLWVFGEFLSLWNMNFHNPALEIWVMKEYKLKSSWTKTLVIPIDNDIPWFSPIYSTKSGDIIGTGGRHGLVKYNNKGQLLEHLKMNPKAFEVAMYKESLLSLPRDREQV