AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene80610


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80610.t1 MTR_3g103020 63.488 367 124 7 3 365 14 374 1.72e-153 437
MS.gene80610.t1 MTR_4g109270 62.903 372 118 9 3 366 2 361 6.86e-147 420
MS.gene80610.t1 MTR_3g034180 60.789 380 125 10 1 365 115 485 2.98e-140 407
MS.gene80610.t1 MTR_4g109280 61.685 368 124 9 3 366 2 356 6.59e-133 384
MS.gene80610.t1 MTR_3g034160 59.580 381 130 11 1 366 1 372 3.20e-132 383
MS.gene80610.t1 MTR_3g034130 58.919 370 129 10 1 355 1 362 4.65e-131 380
MS.gene80610.t1 MTR_4g117770 59.893 374 127 10 3 365 2 363 5.81e-129 374
MS.gene80610.t1 MTR_4g117810 59.893 374 127 10 3 365 2 363 5.81e-129 374
MS.gene80610.t1 MTR_6g060650 60.484 372 124 10 9 366 8 370 3.53e-128 372
MS.gene80610.t1 MTR_4g122850 59.270 356 126 12 20 364 12 359 1.69e-127 371
MS.gene80610.t1 MTR_4g023080 57.724 369 135 9 1 366 1 351 4.49e-127 369
MS.gene80610.t1 MTR_4g117780 59.290 366 129 11 8 365 10 363 1.32e-126 368
MS.gene80610.t1 MTR_4g023090 55.820 378 135 10 9 366 16 381 1.65e-126 369
MS.gene80610.t1 MTR_4g117720 55.676 370 112 10 3 363 45 371 9.33e-124 362
MS.gene80610.t1 MTR_4g094365 55.376 372 146 9 3 366 2 361 1.03e-122 358
MS.gene80610.t1 MTR_4g021785 57.453 369 137 9 1 366 1 352 3.27e-122 357
MS.gene80610.t1 MTR_4g117850 58.402 363 130 10 9 362 23 373 6.31e-122 357
MS.gene80610.t1 MTR_4g023070 54.617 379 139 11 7 365 1 366 1.55e-118 348
MS.gene80610.t1 MTR_4g023120 53.298 379 144 11 7 365 1 366 5.65e-114 336
MS.gene80610.t1 MTR_8g433040 53.226 372 146 10 1 365 10 360 7.91e-114 336
MS.gene80610.t1 MTR_8g032380 53.226 372 146 10 1 365 10 360 7.91e-114 336
MS.gene80610.t1 MTR_5g070080 52.604 384 151 10 3 363 4 379 9.83e-114 336
MS.gene80610.t1 MTR_4g116330 53.639 371 157 9 2 366 16 377 2.41e-112 332
MS.gene80610.t1 MTR_4g118380 55.989 359 124 10 9 342 8 357 3.03e-112 331
MS.gene80610.t1 MTR_4g023380 52.591 386 128 10 9 366 16 374 2.66e-111 330
MS.gene80610.t1 MTR_5g097210 51.604 374 157 11 1 365 1 359 3.28e-111 329
MS.gene80610.t1 MTR_5g070130 51.359 368 163 9 9 366 11 372 6.50e-107 319
MS.gene80610.t1 MTR_4g023190 53.619 373 146 12 2 366 3 356 6.12e-106 315
MS.gene80610.t1 MTR_1g055135 50.656 381 162 12 1 365 1 371 1.17e-102 308
MS.gene80610.t1 MTR_4g023130 51.366 366 122 10 1 366 1 310 2.50e-102 305
MS.gene80610.t1 MTR_4g023150 52.279 373 152 12 2 366 3 357 6.78e-101 302
MS.gene80610.t1 MTR_4g023440 50.552 362 125 9 9 366 18 329 4.25e-100 300
MS.gene80610.t1 MTR_5g070088 47.792 385 159 10 9 363 7 379 2.01e-99 300
MS.gene80610.t1 MTR_4g023200 52.273 352 142 12 23 366 24 357 2.10e-99 299
MS.gene80610.t1 MTR_4g117750 51.070 374 149 12 7 365 1 355 4.05e-98 300
MS.gene80610.t1 MTR_4g117750 59.813 107 43 0 259 365 373 479 4.23e-33 129
MS.gene80610.t1 MTR_8g032390 49.448 362 144 11 9 363 40 369 5.72e-98 295
MS.gene80610.t1 MTR_4g121580 49.863 365 133 12 9 359 11 339 5.40e-94 286
MS.gene80610.t1 MTR_8g013010 58.423 279 97 9 3 274 48 314 1.26e-92 280
MS.gene80610.t1 MTR_1g055165 47.027 370 134 10 2 366 3 315 1.79e-92 280
MS.gene80610.t1 MTR_4g116330 47.439 371 141 9 2 366 16 338 6.27e-88 269
MS.gene80610.t1 MTR_4g117870 49.346 306 111 6 61 365 1 263 1.52e-86 263
MS.gene80610.t1 MTR_8g433030 46.240 359 127 11 9 363 40 336 4.19e-82 254
MS.gene80610.t1 MTR_1g055195 48.562 313 129 11 62 363 181 472 4.19e-76 243
MS.gene80610.t1 MTR_4g118400 50.000 292 105 10 80 363 36 294 3.62e-72 227
MS.gene80610.t1 MTR_7g079370 42.241 348 166 17 38 363 16 350 7.52e-65 210
MS.gene80610.t1 MTR_4g117430 65.854 164 44 4 107 270 3 154 1.50e-63 200
MS.gene80610.t1 MTR_7g079400 44.062 320 151 13 64 366 26 334 2.53e-63 205
MS.gene80610.t1 MTR_2g048580 39.516 372 177 19 3 363 2 336 3.03e-62 203
MS.gene80610.t1 MTR_8g040935 55.288 208 87 3 162 366 1 205 3.06e-62 198
MS.gene80610.t1 MTR_4g116320 54.091 220 88 6 151 365 43 254 2.44e-60 195
MS.gene80610.t1 MTR_4g118370 46.429 252 104 7 118 365 32 256 2.78e-60 195
MS.gene80610.t1 MTR_8g102520 39.939 328 154 11 44 363 24 316 4.71e-60 196
MS.gene80610.t1 MTR_4g117530 41.844 282 107 9 89 365 20 249 6.24e-56 184
MS.gene80610.t1 MTR_4g116340 49.356 233 84 9 12 234 39 247 3.75e-54 179
MS.gene80610.t1 MTR_6g463430 49.282 209 92 6 162 366 1 199 2.05e-50 167
MS.gene80610.t1 MTR_1g055175 48.485 198 89 8 174 366 9 198 2.26e-48 162
MS.gene80610.t1 MTR_4g114700 41.667 264 90 8 107 360 9 218 8.02e-47 159
MS.gene80610.t1 MTR_1g055250 42.991 214 110 8 146 356 49 253 2.95e-43 153
MS.gene80610.t1 MTR_4g109290 50.888 169 42 3 1 162 1 135 1.72e-41 144
MS.gene80610.t1 MTR_7g079420 38.603 272 115 12 106 363 905 1138 2.35e-40 152
MS.gene80610.t1 MTR_7g117720 48.241 199 71 9 1 188 1 178 8.22e-40 142
MS.gene80610.t1 MTR_7g117720 58.140 86 32 2 282 363 186 271 3.63e-18 84.0
MS.gene80610.t1 MTR_4g118360 57.937 126 45 5 244 365 1 122 6.14e-36 127
MS.gene80610.t1 MTR_5g069120 43.094 181 82 6 19 182 1 177 2.85e-34 125
MS.gene80610.t1 MTR_8g098830 43.503 177 89 7 169 342 30 198 9.28e-32 120
MS.gene80610.t1 MTR_5g057790 31.356 354 204 13 9 350 46 372 3.77e-31 122
MS.gene80610.t1 MTR_4g122860 37.220 223 98 6 145 363 130 314 2.09e-30 119
MS.gene80610.t1 MTR_4g122860 52.500 80 37 1 9 87 70 149 2.44e-13 70.9
MS.gene80610.t1 MTR_5g023000 62.222 90 34 0 276 365 6 95 2.09e-30 112
MS.gene80610.t1 MTR_1g068875 29.641 334 202 11 8 325 3 319 4.78e-30 119
MS.gene80610.t1 MTR_5g057690 30.769 351 200 14 9 350 46 362 1.80e-29 117
MS.gene80610.t1 MTR_2g021150 27.419 372 234 14 9 361 14 368 2.64e-29 116
MS.gene80610.t1 MTR_5g057710 31.034 377 213 16 9 364 46 396 8.08e-29 115
MS.gene80610.t1 MTR_2g426020 28.852 357 212 12 5 334 2 343 1.24e-28 115
MS.gene80610.t1 MTR_1g094210 26.842 380 229 13 1 361 49 398 3.24e-28 114
MS.gene80610.t1 MTR_2g028160 30.084 359 204 16 8 330 4 351 3.34e-28 114
MS.gene80610.t1 MTR_1g094210 27.451 357 211 12 1 338 49 376 4.48e-28 114
MS.gene80610.t1 MTR_3g007360 30.189 371 217 17 12 362 55 403 8.09e-27 110
MS.gene80610.t1 MTR_5g057020 32.143 308 171 13 9 308 46 323 1.40e-26 108
MS.gene80610.t1 MTR_3g007410 30.909 330 187 16 12 323 55 361 7.44e-26 107
MS.gene80610.t1 MTR_2g024110 27.566 341 205 15 8 325 3 324 8.06e-26 107
MS.gene80610.t1 MTR_3g036290 31.183 372 205 20 9 364 22 358 9.70e-26 106
MS.gene80610.t1 MTR_5g022420 27.729 339 222 11 9 344 27 345 9.75e-26 107
MS.gene80610.t1 MTR_3g007330 31.270 307 179 10 9 304 48 333 1.23e-25 107
MS.gene80610.t1 MTR_1g068835 28.990 307 186 9 8 299 3 292 1.50e-25 106
MS.gene80610.t1 MTR_4g055060 30.547 311 178 10 9 299 30 322 2.24e-25 106
MS.gene80610.t1 MTR_4g133170 26.567 335 212 9 8 326 3 319 2.47e-25 105
MS.gene80610.t1 MTR_0667s0010 26.879 346 206 10 9 324 6 334 3.02e-25 105
MS.gene80610.t1 MTR_1g097330 29.819 332 187 14 9 320 16 321 3.31e-25 105
MS.gene80610.t1 MTR_2g028130 29.310 348 193 15 8 317 4 336 4.88e-25 105
MS.gene80610.t1 MTR_7g070830 28.065 367 197 14 9 320 21 375 9.15e-25 104
MS.gene80610.t1 MTR_4g107820 27.019 322 199 11 4 312 31 329 9.89e-25 104
MS.gene80610.t1 MTR_4g107780 27.019 322 199 11 4 312 31 329 9.89e-25 104
MS.gene80610.t1 MTR_4g107780 27.019 322 199 11 4 312 31 329 1.03e-24 104
MS.gene80610.t1 MTR_4g107820 27.019 322 199 11 4 312 31 329 1.04e-24 104
MS.gene80610.t1 MTR_3g010970 28.610 374 210 16 12 361 51 391 1.24e-24 103
MS.gene80610.t1 MTR_3g006670 29.483 329 199 11 9 323 49 358 1.25e-24 104
MS.gene80610.t1 MTR_7g070880 27.027 370 197 15 9 320 21 375 1.62e-24 103
MS.gene80610.t1 MTR_2g055970 25.278 360 252 8 9 361 211 560 2.72e-24 104
MS.gene80610.t1 MTR_2g025420 26.630 368 215 10 9 334 6 360 2.91e-24 103
MS.gene80610.t1 MTR_4g061340 30.312 320 175 13 9 305 26 320 1.01e-23 101
MS.gene80610.t1 MTR_3g013740 28.698 338 170 16 9 306 44 350 1.61e-23 101
MS.gene80610.t1 MTR_2g028140 28.571 329 182 13 6 294 2 317 3.20e-23 100
MS.gene80610.t1 MTR_6g086825 26.933 401 238 15 9 366 70 458 4.52e-23 100
MS.gene80610.t1 MTR_6g034720 45.652 138 60 5 130 258 53 184 5.66e-23 95.9
MS.gene80610.t1 MTR_8g467140 26.710 307 197 9 9 303 32 322 8.63e-23 97.8
MS.gene80610.t1 MTR_5g096630 25.240 416 248 13 1 366 10 412 8.66e-23 99.0
MS.gene80610.t1 MTR_2g426070 27.708 397 228 15 10 366 7 384 9.43e-23 99.0
MS.gene80610.t1 MTR_2g426060 29.379 354 203 14 5 325 2 341 1.28e-22 98.6
MS.gene80610.t1 MTR_2g021050 29.275 345 184 15 8 325 4 315 1.73e-22 97.8
MS.gene80610.t1 MTR_6g090180 26.536 407 241 13 2 362 40 434 1.99e-22 98.2
MS.gene80610.t1 MTR_2g426090 27.463 335 208 10 12 320 9 334 2.39e-22 97.8
MS.gene80610.t1 MTR_4g070550 27.500 400 229 17 8 365 4 384 2.53e-22 97.8
MS.gene80610.t1 MTR_3g083640 26.247 381 225 14 9 364 55 404 3.09e-22 97.4
MS.gene80610.t1 MTR_1g056710 28.339 307 187 13 2 294 27 314 3.19e-22 97.1
MS.gene80610.t1 MTR_1g054725 25.661 378 234 12 9 361 20 375 3.29e-22 97.1
MS.gene80610.t1 MTR_4g023430 55.914 93 35 2 2 91 34 123 3.45e-22 94.0
MS.gene80610.t1 MTR_4g023430 37.288 118 56 3 255 366 114 219 1.91e-13 69.3
MS.gene80610.t1 MTR_5g011200 29.139 302 181 12 9 294 17 301 3.63e-22 96.7
MS.gene80610.t1 MTR_2g078900 28.947 304 183 12 9 300 33 315 4.60e-22 96.3
MS.gene80610.t1 MTR_7g070440 29.664 327 175 16 12 306 10 313 1.02e-21 95.5
MS.gene80610.t1 MTR_3g014570 28.165 316 190 11 9 307 29 324 1.08e-21 95.5
MS.gene80610.t1 MTR_3g007430 30.263 304 166 13 12 294 46 324 1.10e-21 95.5
MS.gene80610.t1 MTR_0044s0300 27.078 373 236 16 9 364 38 391 1.12e-21 95.5
MS.gene80610.t1 MTR_7g079450 41.912 136 72 4 229 363 2 131 1.52e-21 89.7
MS.gene80610.t1 MTR_1g068860 27.273 308 194 8 7 299 2 294 1.85e-21 94.7
MS.gene80610.t1 MTR_8g099460 27.707 314 190 8 7 298 3 301 1.85e-21 95.1
MS.gene80610.t1 MTR_3g030250 25.737 373 227 14 9 361 37 379 1.95e-21 94.7
MS.gene80610.t1 MTR_8g101580 26.524 328 217 10 3 320 39 352 1.96e-21 95.1
MS.gene80610.t1 MTR_1g097490 28.571 364 227 14 9 361 49 390 2.97e-21 94.4
MS.gene80610.t1 MTR_2g021770 28.155 412 234 16 1 362 4 403 3.12e-21 94.7
MS.gene80610.t1 MTR_3g030350 26.954 371 238 13 9 361 35 390 4.24e-21 94.0
MS.gene80610.t1 MTR_3g083010 28.288 403 228 16 9 363 6 395 5.72e-21 94.0
MS.gene80610.t1 MTR_3g036430 28.184 369 208 17 9 364 20 344 6.65e-21 92.8
MS.gene80610.t1 MTR_6g027910 27.047 403 228 19 1 364 1 376 7.73e-21 93.2
MS.gene80610.t1 MTR_5g046300 27.090 299 194 10 9 300 4 285 9.01e-21 92.4
MS.gene80610.t1 MTR_5g046290 27.090 299 194 10 9 300 4 285 9.01e-21 92.4
MS.gene80610.t1 MTR_7g057270 28.144 334 195 14 9 308 26 348 1.71e-20 92.4
MS.gene80610.t1 MTR_3g010870 27.441 379 218 16 9 361 37 384 2.00e-20 92.0
MS.gene80610.t1 MTR_2g028110 28.024 339 202 12 8 323 3 322 2.42e-20 91.7
MS.gene80610.t1 MTR_7g055870 26.179 424 230 13 9 361 13 424 2.49e-20 92.0
MS.gene80610.t1 MTR_7g055930 26.179 424 230 14 9 361 13 424 2.49e-20 92.0
MS.gene80610.t1 MTR_2g046900 25.501 349 228 11 9 337 28 364 2.53e-20 91.7
MS.gene80610.t1 MTR_4g130330 27.342 395 236 15 4 359 2 384 2.72e-20 91.7
MS.gene80610.t1 MTR_3g009260 28.406 345 218 13 12 350 44 365 2.95e-20 91.7
MS.gene80610.t1 MTR_7g407070 28.701 331 198 13 1 304 24 343 3.01e-20 91.7
MS.gene80610.t1 MTR_3g007270 27.596 366 214 13 9 347 47 388 3.21e-20 91.7
MS.gene80610.t1 MTR_2g021190 29.766 299 182 10 9 294 21 304 3.24e-20 91.3
MS.gene80610.t1 MTR_3g010390 28.344 314 192 13 9 299 33 336 3.69e-20 91.3
MS.gene80610.t1 MTR_3g010590 26.720 378 221 13 9 361 39 385 4.13e-20 90.9
MS.gene80610.t1 MTR_3g014540 28.981 314 186 13 9 305 29 322 5.27e-20 90.9
MS.gene80610.t1 MTR_6g053260 27.901 362 219 12 8 355 336 669 5.69e-20 92.0
MS.gene80610.t1 MTR_7g062100 27.342 395 223 15 9 361 24 396 6.07e-20 90.9
MS.gene80610.t1 MTR_3g010430 25.722 381 236 12 9 364 36 394 7.88e-20 90.5
MS.gene80610.t1 MTR_0760s0010 30.137 292 172 13 14 296 52 320 7.93e-20 90.5
MS.gene80610.t1 MTR_4g129190 25.978 358 205 14 7 320 4 345 8.48e-20 90.1
MS.gene80610.t1 MTR_6g065980 29.252 294 177 12 9 296 16 284 1.07e-19 89.7
MS.gene80610.t1 MTR_2g038680 24.138 406 244 12 8 362 15 407 1.29e-19 89.7
MS.gene80610.t1 MTR_3g009240 28.329 353 217 14 9 350 36 363 1.43e-19 89.4
MS.gene80610.t1 MTR_7g017040 26.700 397 230 14 9 362 16 394 1.58e-19 89.4
MS.gene80610.t1 MTR_0128s0020 27.750 400 216 21 9 360 18 392 1.60e-19 89.4
MS.gene80610.t1 MTR_8g046310 26.133 375 236 13 12 363 19 375 1.73e-19 89.4
MS.gene80610.t1 MTR_2g021252 24.044 366 233 11 12 362 50 385 2.05e-19 89.0
MS.gene80610.t1 MTR_7g007300 28.571 308 170 13 4 294 100 374 2.60e-19 89.4
MS.gene80610.t1 MTR_2g031680 27.213 305 189 9 9 298 6 292 2.77e-19 88.6
MS.gene80610.t1 MTR_2g021155 29.508 305 189 11 1 294 28 317 3.42e-19 89.7
MS.gene80610.t1 MTR_2g021155 28.708 209 120 10 100 294 689 882 9.56e-11 63.9
MS.gene80610.t1 MTR_3g011100 28.010 382 231 15 9 361 235 601 3.58e-19 89.4
MS.gene80610.t1 MTR_8g464770 25.781 384 238 14 9 363 12 377 4.04e-19 88.2
MS.gene80610.t1 MTR_0128s0070 31.077 325 161 19 7 294 20 318 4.72e-19 88.2
MS.gene80610.t1 MTR_2g046920 26.797 306 196 10 9 303 24 312 5.60e-19 87.8
MS.gene80610.t1 MTR_3g010620 26.479 355 210 16 12 353 39 355 6.05e-19 87.8
MS.gene80610.t1 MTR_7g017130 26.420 405 226 16 8 366 17 395 6.15e-19 87.8
MS.gene80610.t1 MTR_2g025960 28.571 252 144 7 100 324 1 243 6.59e-19 86.7
MS.gene80610.t1 MTR_2g026010 26.823 384 238 13 8 366 3 368 7.65e-19 87.4
MS.gene80610.t1 MTR_2g031720 26.823 384 234 11 9 365 6 369 7.68e-19 87.4
MS.gene80610.t1 MTR_5g069390 25.377 398 239 15 9 360 26 411 7.83e-19 88.2
MS.gene80610.t1 MTR_3g013770 28.571 308 177 13 9 294 33 319 8.13e-19 87.4
MS.gene80610.t1 MTR_4g013180 27.596 366 225 13 9 340 11 370 1.02e-18 87.8
MS.gene80610.t1 MTR_5g046260 25.424 295 174 11 9 300 4 255 1.06e-18 85.9
MS.gene80610.t1 MTR_4g014370 24.697 413 240 17 9 366 11 407 1.25e-18 87.0
MS.gene80610.t1 MTR_7g066000 27.139 339 215 14 9 320 25 358 1.30e-18 87.0
MS.gene80610.t1 MTR_3g006570 26.632 383 229 17 9 364 21 378 1.69e-18 86.3
MS.gene80610.t1 MTR_3g009310 29.221 308 179 13 9 299 42 327 1.92e-18 86.3
MS.gene80610.t1 MTR_7g077970 29.155 343 191 14 9 309 7 339 1.95e-18 86.7
MS.gene80610.t1 MTR_4g102410 23.096 407 253 13 2 362 54 446 1.96e-18 86.7
MS.gene80610.t1 MTR_1g115160 26.790 377 224 16 7 361 20 366 2.09e-18 85.9
MS.gene80610.t1 MTR_5g007610 26.667 330 188 13 1 300 33 338 2.22e-18 86.3
MS.gene80610.t1 MTR_6g053240 25.753 365 228 11 8 355 27 365 2.38e-18 86.3
MS.gene80610.t1 MTR_1g055070 27.536 276 158 11 2 248 42 304 2.47e-18 85.9
MS.gene80610.t1 MTR_2g029990 26.902 368 241 14 10 364 52 404 2.68e-18 85.9
MS.gene80610.t1 MTR_5g009060 30.120 332 176 18 9 298 25 342 4.26e-18 85.5
MS.gene80610.t1 MTR_3g036335 24.138 377 239 15 9 361 41 394 5.69e-18 84.7
MS.gene80610.t1 MTR_6g021880 28.750 320 179 14 20 311 31 329 5.88e-18 84.7
MS.gene80610.t1 MTR_6g079810 24.819 415 240 16 2 362 63 459 6.61e-18 85.1
MS.gene80610.t1 MTR_7g066100 27.190 331 194 12 9 303 11 330 6.87e-18 84.7
MS.gene80610.t1 MTR_2g425980 27.726 321 190 11 8 298 4 312 7.10e-18 84.7
MS.gene80610.t1 MTR_5g069760 24.412 340 211 11 9 320 6 327 7.88e-18 84.3
MS.gene80610.t1 MTR_5g021860 25.414 362 194 12 8 306 29 377 8.57e-18 85.1
MS.gene80610.t1 MTR_2g021210 28.620 297 177 12 9 294 84 356 9.82e-18 84.3
MS.gene80610.t1 MTR_5g057643 30.942 223 134 7 9 221 46 258 1.05e-17 82.4
MS.gene80610.t1 MTR_5g069930 25.071 351 210 12 5 320 2 334 1.06e-17 84.0
MS.gene80610.t1 MTR_2g104340 26.799 403 236 17 2 362 7 392 1.16e-17 84.0
MS.gene80610.t1 MTR_5g021860 25.414 362 194 12 8 306 29 377 1.21e-17 84.3
MS.gene80610.t1 MTR_6g007135 27.451 306 199 9 9 300 26 322 1.21e-17 84.0
MS.gene80610.t1 MTR_5g096710 30.149 335 174 14 9 307 23 333 1.32e-17 84.0
MS.gene80610.t1 MTR_3g023930 27.747 364 222 14 9 361 34 367 1.38e-17 83.6
MS.gene80610.t1 MTR_2g031640 27.003 337 204 12 9 323 6 322 1.43e-17 83.6
MS.gene80610.t1 MTR_2g461450 26.786 336 199 13 9 320 18 330 1.88e-17 83.2
MS.gene80610.t1 MTR_4g080200 28.155 309 176 13 7 296 1 282 1.93e-17 82.8
MS.gene80610.t1 MTR_4g037465 27.415 383 211 18 9 347 21 380 2.17e-17 83.2
MS.gene80610.t1 MTR_7g078900 26.807 429 218 18 11 362 14 423 2.44e-17 83.2
MS.gene80610.t1 MTR_7g079640 27.297 370 223 15 1 344 5 354 2.70e-17 82.8
MS.gene80610.t1 MTR_0097s0030 27.933 358 184 16 5 320 10 335 3.93e-17 82.4
MS.gene80610.t1 MTR_2g047240 27.933 358 184 16 5 320 10 335 3.93e-17 82.4
MS.gene80610.t1 MTR_7g078860 27.446 368 219 13 1 331 1 357 4.00e-17 82.4
MS.gene80610.t1 MTR_4g117550 25.250 400 218 15 3 362 11 369 4.13e-17 82.0
MS.gene80610.t1 MTR_3g010520 26.344 372 218 18 9 361 25 359 4.19e-17 82.0
MS.gene80610.t1 MTR_1g068905 27.711 249 143 6 8 248 3 222 4.63e-17 81.3
MS.gene80610.t1 MTR_3g024150 26.455 378 220 14 12 361 38 385 4.74e-17 82.0
MS.gene80610.t1 MTR_4g031770 24.935 385 237 12 9 361 4 368 4.89e-17 82.0
MS.gene80610.t1 MTR_8g073550 31.937 191 116 5 9 189 30 216 5.28e-17 79.7
MS.gene80610.t1 MTR_5g097350 25.459 381 226 16 18 362 25 383 5.66e-17 82.0
MS.gene80610.t1 MTR_1g097560 26.400 375 219 19 8 361 35 373 5.76e-17 81.6
MS.gene80610.t1 MTR_4g024890 25.831 391 234 18 10 361 11 384 5.94e-17 81.6
MS.gene80610.t1 MTR_7g028660 25.831 391 231 16 9 362 11 379 6.15e-17 81.6
MS.gene80610.t1 MTR_5g037680 26.316 399 223 19 9 361 8 381 7.01e-17 82.0
MS.gene80610.t1 MTR_3g436150 28.931 318 192 12 9 304 32 337 7.57e-17 81.6
MS.gene80610.t1 MTR_7g078040 28.169 355 188 14 9 309 9 350 8.78e-17 81.6
MS.gene80610.t1 MTR_7g017170 25.236 424 219 17 8 366 17 407 8.86e-17 81.6
MS.gene80610.t1 MTR_8g063440 22.108 389 261 13 2 362 5 379 9.81e-17 81.3
MS.gene80610.t1 MTR_1g050542 23.077 299 210 6 9 303 58 340 9.97e-17 81.3
MS.gene80610.t1 MTR_4g030830 25.980 408 240 14 1 361 1 393 1.21e-16 80.9
MS.gene80610.t1 MTR_1g055375 24.397 373 246 13 12 361 7 366 1.39e-16 80.5
MS.gene80610.t1 MTR_0064s0160 27.052 329 185 13 9 296 42 356 1.40e-16 81.3
MS.gene80610.t1 MTR_6g004660 28.205 312 197 11 9 302 16 318 1.54e-16 80.5
MS.gene80610.t1 MTR_4g028510 24.365 394 241 14 12 362 19 398 1.62e-16 80.9
MS.gene80610.t1 MTR_3g011060 25.857 321 187 10 9 300 28 326 1.84e-16 80.5
MS.gene80610.t1 MTR_1g007450 23.858 394 241 15 2 352 5 382 2.04e-16 80.5
MS.gene80610.t1 MTR_5g048160 25.879 398 240 18 8 362 3 388 2.09e-16 80.1
MS.gene80610.t1 MTR_0129s0070 24.198 405 243 16 1 362 9 392 2.27e-16 80.1
MS.gene80610.t1 MTR_2g024100 27.532 316 179 13 11 294 9 306 2.92e-16 80.1
MS.gene80610.t1 MTR_7g078840 28.977 352 188 16 9 307 10 352 2.96e-16 80.1
MS.gene80610.t1 MTR_2g031700 27.059 255 152 7 9 253 6 236 3.05e-16 78.6
MS.gene80610.t1 MTR_2g022000 24.324 407 236 18 9 358 16 407 3.08e-16 80.1
MS.gene80610.t1 MTR_7g445890 25.945 397 220 18 9 361 16 382 3.09e-16 79.7
MS.gene80610.t1 MTR_2g021800 25.243 412 235 16 9 362 16 412 3.24e-16 79.7
MS.gene80610.t1 MTR_7g013590 30.033 303 171 12 12 294 39 320 3.73e-16 79.7
MS.gene80610.t1 MTR_1g088120 27.606 355 206 14 12 326 13 356 4.06e-16 79.7
MS.gene80610.t1 MTR_8g013005 67.925 53 17 0 311 363 1 53 4.29e-16 72.4
MS.gene80610.t1 MTR_3g030330 26.121 379 227 15 9 361 20 371 4.32e-16 79.3
MS.gene80610.t1 MTR_0115s0020 24.623 398 246 15 8 362 9 395 5.51e-16 79.0
MS.gene80610.t1 MTR_0242s0060 28.161 348 184 16 9 309 9 337 5.69e-16 79.0
MS.gene80610.t1 MTR_0242s0040 28.161 348 184 16 9 309 9 337 5.69e-16 79.0
MS.gene80610.t1 MTR_5g008530 66.667 57 18 1 7 62 16 72 6.15e-16 72.4
MS.gene80610.t1 MTR_3g010920 26.829 369 223 17 9 361 44 381 8.05e-16 78.6
MS.gene80610.t1 MTR_5g057040 31.915 188 117 5 9 188 46 230 9.46e-16 79.3
MS.gene80610.t1 MTR_4g028660 23.810 399 240 14 9 362 16 395 9.61e-16 78.2
MS.gene80610.t1 MTR_4g027450 23.810 399 240 14 9 362 16 395 9.61e-16 78.2
MS.gene80610.t1 MTR_3g006500 25.195 385 240 14 1 361 9 369 9.61e-16 78.2
MS.gene80610.t1 MTR_7g061050 27.301 326 192 11 9 307 13 320 9.96e-16 78.2
MS.gene80610.t1 MTR_3g011650 33.149 181 111 5 12 187 82 257 1.08e-15 77.0
MS.gene80610.t1 MTR_3g006530 24.219 384 238 16 9 364 40 398 1.08e-15 78.2
MS.gene80610.t1 MTR_3g058470 26.247 381 214 15 8 364 36 373 1.14e-15 77.8
MS.gene80610.t1 MTR_1g054575 25.658 304 178 9 9 293 52 326 1.20e-15 78.6
MS.gene80610.t1 MTR_3g011020 27.778 324 174 13 9 308 28 315 1.23e-15 77.8
MS.gene80610.t1 MTR_1g055145 52.222 90 38 3 19 105 43 130 1.68e-15 76.3
MS.gene80610.t1 MTR_7g056503 24.156 385 252 14 9 361 21 397 2.73e-15 77.0
MS.gene80610.t1 MTR_7g061060 26.957 345 204 12 9 320 13 342 3.04e-15 77.0
MS.gene80610.t1 MTR_6g478230 25.000 392 231 15 12 360 30 401 3.76e-15 76.6
MS.gene80610.t1 MTR_7g067680 26.623 308 159 10 9 294 49 311 4.32e-15 76.3
MS.gene80610.t1 MTR_6g048120 26.214 309 187 9 9 294 36 326 4.44e-15 76.3
MS.gene80610.t1 MTR_6g034830 41.593 113 54 3 1 113 12 112 5.65e-15 71.2
MS.gene80610.t1 MTR_2g078850 27.152 302 188 12 12 300 33 315 5.95e-15 75.9
MS.gene80610.t1 MTR_3g024040 26.756 299 189 13 16 307 38 313 6.08e-15 75.9
MS.gene80610.t1 MTR_6g016285 24.631 406 244 13 9 361 21 417 6.15e-15 76.3
MS.gene80610.t1 MTR_3g007300 28.571 308 166 13 9 308 49 310 7.86e-15 75.5
MS.gene80610.t1 MTR_1g112930 26.910 301 178 15 9 293 25 299 8.95e-15 75.1
MS.gene80610.t1 MTR_1g055200 46.988 83 39 2 103 182 5 85 1.17e-14 69.7
MS.gene80610.t1 MTR_3g024110 25.246 305 189 10 9 300 101 379 1.23e-14 75.1
MS.gene80610.t1 MTR_3g058480 30.483 269 150 12 8 255 38 290 1.49e-14 74.3
MS.gene80610.t1 MTR_7g056170 24.274 379 183 14 9 320 75 416 1.49e-14 75.1
MS.gene80610.t1 MTR_1g442850 27.612 402 205 22 12 361 8 375 1.54e-14 74.7
MS.gene80610.t1 MTR_6g017280 25.714 350 208 14 9 320 9 344 2.06e-14 74.3
MS.gene80610.t1 MTR_7g062060 24.318 403 242 13 9 362 12 400 2.09e-14 74.3
MS.gene80610.t1 MTR_2g010920 23.753 421 253 16 1 361 12 424 2.22e-14 74.3
MS.gene80610.t1 MTR_5g023570 39.091 110 53 3 9 113 37 137 2.32e-14 70.1
MS.gene80610.t1 MTR_2g047832 24.523 367 221 12 9 337 29 377 2.83e-14 73.9
MS.gene80610.t1 MTR_5g068040 25.938 320 191 11 9 306 16 311 3.30e-14 73.6
MS.gene80610.t1 MTR_4g033495 24.444 360 213 15 9 325 27 370 3.49e-14 73.9
MS.gene80610.t1 MTR_3g464500 25.635 394 234 15 9 361 27 402 3.81e-14 73.6
MS.gene80610.t1 MTR_6g055210 28.267 329 171 15 9 293 22 329 4.21e-14 73.6
MS.gene80610.t1 MTR_3g058440 29.958 237 133 10 8 224 34 257 4.34e-14 72.4
MS.gene80610.t1 MTR_2g104280 25.806 403 235 16 9 362 14 401 4.45e-14 73.2
MS.gene80610.t1 MTR_3g009250 32.597 181 111 5 12 187 44 218 4.96e-14 71.6
MS.gene80610.t1 MTR_2g046830 26.452 310 186 13 12 303 28 313 5.68e-14 73.2
MS.gene80610.t1 MTR_4g030090 25.126 398 239 13 10 361 15 399 6.65e-14 72.8
MS.gene80610.t1 MTR_1g037540 25.197 381 226 19 12 343 8 378 8.67e-14 72.4
MS.gene80610.t1 MTR_0054s0090 23.325 403 227 14 17 362 25 402 9.38e-14 72.4
MS.gene80610.t1 MTR_7g056710 25.948 343 204 15 9 320 18 341 1.25e-13 72.0
MS.gene80610.t1 MTR_7g060960 26.667 315 168 12 9 303 32 303 1.26e-13 71.6
MS.gene80610.t1 MTR_8g062660 26.347 334 159 15 9 298 22 312 1.58e-13 72.4
MS.gene80610.t1 MTR_6g080680 22.750 400 244 14 3 360 13 389 1.60e-13 71.6
MS.gene80610.t1 MTR_5g097680 23.148 432 245 16 1 362 9 423 1.92e-13 71.6
MS.gene80610.t1 MTR_0267s0050 24.198 343 216 13 12 320 9 341 2.04e-13 71.2
MS.gene80610.t1 MTR_7g056760 23.896 385 258 13 9 361 23 404 2.09e-13 71.2
MS.gene80610.t1 MTR_3g013950 22.589 394 249 15 12 364 9 387 3.08e-13 70.9
MS.gene80610.t1 MTR_3g096280 26.146 371 204 15 21 364 17 344 3.11e-13 70.5
MS.gene80610.t1 MTR_6g079770 25.659 417 221 17 12 362 20 413 3.40e-13 70.9
MS.gene80610.t1 MTR_7g060940 25.432 405 227 17 3 360 16 392 3.59e-13 70.5
MS.gene80610.t1 MTR_7g061090 26.225 347 184 16 9 307 22 344 3.62e-13 70.5
MS.gene80610.t1 MTR_4g013175 28.232 379 182 15 12 320 13 371 3.79e-13 70.5
MS.gene80610.t1 MTR_1g055055 25.974 308 182 9 9 304 26 299 4.08e-13 70.1
MS.gene80610.t1 MTR_7g035295 26.039 361 178 16 9 320 16 336 4.97e-13 70.1
MS.gene80610.t1 MTR_8g041270 25.304 411 241 15 2 362 8 402 6.19e-13 69.7
MS.gene80610.t1 MTR_7g050520 26.791 321 170 12 9 294 22 312 6.28e-13 69.7
MS.gene80610.t1 MTR_5g056020 25.304 411 242 15 9 361 17 420 6.49e-13 70.1
MS.gene80610.t1 MTR_4g030110 26.567 335 179 14 9 312 30 328 6.77e-13 69.7
MS.gene80610.t1 MTR_6g013270 25.705 319 197 11 9 308 29 326 6.91e-13 69.7
MS.gene80610.t1 MTR_2g046800 27.711 332 172 16 9 294 14 323 7.51e-13 69.7
MS.gene80610.t1 MTR_7g050480 27.103 321 169 12 9 294 22 312 7.53e-13 69.7
MS.gene80610.t1 MTR_7g056737 27.246 334 178 15 5 303 18 321 7.79e-13 69.7
MS.gene80610.t1 MTR_6g048140 30.063 316 160 16 9 294 39 323 8.54e-13 69.3
MS.gene80610.t1 MTR_7g055987 27.089 347 179 16 12 318 23 335 1.21e-12 68.9
MS.gene80610.t1 MTR_1g071010 23.404 235 164 7 10 233 16 245 1.36e-12 68.9
MS.gene80610.t1 MTR_7g066850 23.433 367 226 13 9 338 23 371 1.39e-12 68.9
MS.gene80610.t1 MTR_5g072060 27.642 369 212 20 5 341 2 347 1.42e-12 69.3
MS.gene80610.t1 MTR_6g461660 24.316 329 197 11 12 300 22 338 1.43e-12 68.9
MS.gene80610.t1 MTR_7g077990 24.148 352 217 11 9 330 17 348 1.76e-12 68.6
MS.gene80610.t1 MTR_2g437110 23.618 398 232 14 9 361 22 392 1.83e-12 68.6
MS.gene80610.t1 MTR_7g016930 25.697 323 171 13 9 295 16 305 1.89e-12 67.8
MS.gene80610.t1 MTR_6g004210 25.316 316 190 12 20 300 36 340 2.12e-12 68.2
MS.gene80610.t1 MTR_4g013185 27.419 372 194 16 12 320 13 371 2.31e-12 68.2
MS.gene80610.t1 MTR_6g017270 29.146 199 118 9 9 188 9 203 3.42e-12 67.4
MS.gene80610.t1 MTR_7g037670 28.750 240 139 11 9 237 23 241 3.67e-12 67.0
MS.gene80610.t1 MTR_0707s0020 24.083 436 238 18 7 363 24 445 5.57e-12 67.0
MS.gene80610.t1 MTR_0054s0100 23.153 406 242 13 9 362 17 404 5.98e-12 67.0
MS.gene80610.t1 MTR_3g010440 32.593 135 85 3 9 137 26 160 6.86e-12 66.2
MS.gene80610.t1 MTR_7g056003 27.500 360 190 18 12 320 18 357 7.43e-12 66.6
MS.gene80610.t1 MTR_4g019990 23.754 341 201 12 9 311 6 325 8.06e-12 66.2
MS.gene80610.t1 MTR_7g055850 28.251 223 120 7 9 194 13 232 8.83e-12 65.5
MS.gene80610.t1 MTR_4g028750 24.806 387 228 14 2 344 9 376 8.89e-12 66.2
MS.gene80610.t1 MTR_3g464470 23.096 394 241 13 9 361 7 379 9.02e-12 66.2
MS.gene80610.t1 MTR_2g066200 24.566 403 239 17 2 362 5 384 9.99e-12 66.2
MS.gene80610.t1 MTR_3g023940 23.784 370 245 10 9 361 34 383 1.03e-11 66.2
MS.gene80610.t1 MTR_1g061330 24.119 369 249 13 9 362 4 356 1.08e-11 65.9
MS.gene80610.t1 MTR_3g010870 29.016 193 112 7 9 188 37 217 1.10e-11 65.5
MS.gene80610.t1 MTR_2g078870 26.545 275 164 15 105 364 58 309 1.10e-11 65.5
MS.gene80610.t1 MTR_7g091630 24.159 327 206 12 9 303 32 348 1.25e-11 65.9
MS.gene80610.t1 MTR_2g021950 23.773 387 247 13 12 362 19 393 1.58e-11 65.5
MS.gene80610.t1 MTR_7g055977 25.212 353 202 16 9 320 7 338 1.68e-11 65.5
MS.gene80610.t1 MTR_1g115185 27.090 299 190 12 9 294 39 322 1.82e-11 65.5
MS.gene80610.t1 MTR_4g006270 25.193 389 226 18 8 365 3 357 2.06e-11 65.1
MS.gene80610.t1 MTR_6g079790 23.151 311 193 10 87 360 2 303 2.31e-11 64.3
MS.gene80610.t1 MTR_3g030310 25.879 313 190 15 9 300 21 312 2.33e-11 65.1
MS.gene80610.t1 MTR_5g096900 27.586 319 171 13 9 285 12 312 3.25e-11 64.3
MS.gene80610.t1 MTR_3g096250 32.317 164 97 6 9 162 47 206 3.41e-11 64.3
MS.gene80610.t1 MTR_7g056717 26.444 329 169 15 14 303 27 321 3.43e-11 64.3
MS.gene80610.t1 MTR_7g052670 25.243 412 241 20 9 361 21 424 3.66e-11 64.7
MS.gene80610.t1 MTR_4g024870 24.096 249 161 7 10 236 45 287 4.11e-11 64.3
MS.gene80610.t1 MTR_5g097820 30.579 242 128 12 9 219 23 255 4.23e-11 63.2
MS.gene80610.t1 MTR_2g022170 32.836 134 74 4 8 137 3 124 4.36e-11 60.5
MS.gene80610.t1 MTR_3g080370 22.959 392 240 11 23 361 35 417 4.61e-11 64.3
MS.gene80610.t1 MTR_7g056200 24.058 345 197 12 9 320 23 335 5.04e-11 63.9
MS.gene80610.t1 MTR_2g010950 21.772 395 261 13 7 361 18 404 6.21e-11 63.9
MS.gene80610.t1 MTR_7g066030 23.134 402 242 16 9 362 21 403 7.26e-11 63.5
MS.gene80610.t1 MTR_6g086920 24.342 456 226 20 7 363 36 471 8.35e-11 63.5
MS.gene80610.t1 MTR_7g091640 26.220 328 194 15 9 303 35 347 8.84e-11 63.2
MS.gene80610.t1 MTR_0649s0020 24.372 398 235 18 9 361 11 387 9.60e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80610.t1 AT3G06240 30.049 406 209 18 9 361 36 419 1.85e-32 126
MS.gene80610.t1 AT3G23880 30.284 317 190 13 8 311 13 311 7.76e-25 104
MS.gene80610.t1 AT4G12560 28.499 393 223 17 9 366 4 373 6.78e-24 102
MS.gene80610.t1 AT4G12560 28.499 393 223 17 9 366 4 373 6.78e-24 102
MS.gene80610.t1 AT4G12560 28.499 393 223 17 9 366 4 373 6.78e-24 102
MS.gene80610.t1 AT4G22390 25.131 382 248 14 8 366 3 369 1.58e-18 86.7
MS.gene80610.t1 AT4G22390 25.131 382 248 14 8 366 3 369 1.64e-18 86.7
MS.gene80610.t1 AT5G62510 26.774 310 194 11 8 301 43 335 2.99e-17 83.2
MS.gene80610.t1 AT3G16210 28.383 303 174 13 9 302 5 273 7.44e-17 81.3
MS.gene80610.t1 AT4G19940 26.936 297 186 11 8 285 34 318 1.57e-16 80.9
MS.gene80610.t1 AT1G30790 26.282 312 203 12 1 294 1 303 3.89e-15 76.6
MS.gene80610.t1 AT2G40925 26.459 257 158 9 8 250 26 265 6.39e-15 75.9
MS.gene80610.t1 AT5G62660 26.408 284 155 10 8 263 40 297 1.96e-14 74.3
MS.gene80610.t1 AT1G33530 24.699 332 192 14 2 309 90 387 2.23e-13 71.6
MS.gene80610.t1 AT3G52320 28.155 309 191 12 8 303 26 316 2.58e-13 70.9
MS.gene80610.t1 AT1G11270 28.099 242 129 11 9 227 35 254 2.30e-12 67.4
MS.gene80610.t1 AT1G11270 28.099 242 129 11 9 227 35 254 2.30e-12 67.4
MS.gene80610.t1 AT2G40910 27.823 248 151 10 8 241 61 294 2.85e-12 68.2
MS.gene80610.t1 AT2G40920 26.103 272 162 12 2 250 43 298 3.05e-12 67.8
MS.gene80610.t1 AT2G40910 27.823 248 151 10 8 241 68 301 3.91e-12 67.8
MS.gene80610.t1 AT3G21120 29.442 197 116 11 7 189 1 188 5.40e-12 67.0
MS.gene80610.t1 AT2G40920 25.692 253 157 10 15 250 1 239 7.89e-12 66.6
MS.gene80610.t1 AT1G47790 25.490 255 168 9 1 249 17 255 1.48e-11 65.9
MS.gene80610.t1 AT2G16220 26.113 337 203 14 9 320 6 321 3.35e-11 64.7
MS.gene80610.t1 AT3G59610 28.772 285 173 15 8 285 7 268 4.20e-11 64.7
MS.gene80610.t1 AT1G12870 22.637 402 238 20 5 364 29 399 4.92e-11 64.3
MS.gene80610.t1 AT1G47340 24.058 345 213 13 7 325 4 325 5.21e-11 64.3
MS.gene80610.t1 AT1G47340 24.058 345 213 13 7 325 4 325 5.21e-11 64.3
MS.gene80610.t1 AT1G47340 24.058 345 213 13 7 325 35 356 5.94e-11 63.9
MS.gene80610.t1 AT1G11270 33.846 130 74 4 9 134 35 156 6.20e-11 62.0
MS.gene80610.t1 AT2G16810 27.953 254 150 10 9 247 41 276 7.00e-11 62.8
MS.gene80610.t1 AT3G16590 27.673 318 188 15 9 304 5 302 7.48e-11 63.5
MS.gene80610.t1 AT3G61340 28.936 235 146 10 2 222 16 243 8.55e-11 63.5
MS.gene80610.t1 AT3G61340 28.936 235 146 10 2 222 41 268 9.69e-11 63.2

Find 77 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGAGAATTTCTTAGTTTA+TGG 0.111007 8.4:+16441182 MS.gene80610:CDS
TATCTAAATCTTGAAATTAA+AGG 0.155978 8.4:+16440686 MS.gene80610:CDS
GCAGAATATTTCTATGGTTT+TGG 0.171498 8.4:+16440821 MS.gene80610:CDS
AAAATGTGAATTAGCAAAAT+TGG 0.175629 8.4:-16440525 None:intergenic
GTCATGATTCACGTTTATTA+AGG 0.188886 8.4:+16441059 MS.gene80610:CDS
CAAATACCTTTCTCTCCTTT+TGG 0.234460 8.4:+16440785 MS.gene80610:CDS
TATTGTGGTTTGTGGGTATT+TGG 0.253702 8.4:+16441163 MS.gene80610:CDS
ATATTGATACAATTGAAATA+TGG 0.279816 8.4:+16441218 MS.gene80610:CDS
TGGAGAATTTCTTAGTTTAT+GGG 0.300088 8.4:+16441183 MS.gene80610:CDS
TATTGTTGTCTTTGATTTAA+CGG 0.303490 8.4:+16441087 MS.gene80610:CDS
TCAAGATTTAGATAAGATTC+AGG 0.316081 8.4:-16440677 None:intergenic
TGATGATTCAAATCCTTCTA+AGG 0.317919 8.4:+16440435 MS.gene80610:CDS
TACTAATATTTCATCGCAAT+TGG 0.320204 8.4:+16440898 MS.gene80610:CDS
GAAATATTCTGCATATAAAC+TGG 0.351251 8.4:-16440810 None:intergenic
ACTTCACCGGTAACCTTAGA+AGG 0.358560 8.4:-16440448 None:intergenic
TGTTTGTGAAATCCAGTAGA+TGG 0.361261 8.4:-16440764 None:intergenic
TATTGATACAATTGAAATAT+GGG 0.363603 8.4:+16441219 MS.gene80610:CDS
ATTGAAACGGATGGTGATAC+TGG 0.365020 8.4:+16441355 MS.gene80610:CDS
TTATATGCAGAATATTTCTA+TGG 0.367225 8.4:+16440815 MS.gene80610:CDS
TCATGATTCACGTTTATTAA+GGG 0.367232 8.4:+16441060 MS.gene80610:CDS
CCTCAATGGGATTGCTATAA+CGG 0.368433 8.4:-16440979 None:intergenic
TCAAATCCTTCTAAGGTTAC+CGG 0.386697 8.4:+16440442 MS.gene80610:CDS
GGATTCCAGAGGTATTTGTT+TGG 0.408420 8.4:-16440743 None:intergenic
TCAAATGCGTTTCTAAGTCT+TGG 0.413160 8.4:+16440483 MS.gene80610:CDS
TGCGATGAAATATTAGTAAC+CGG 0.431931 8.4:-16440893 None:intergenic
AATACAAAATGCCTTCATCT+TGG 0.434813 8.4:+16441251 MS.gene80610:CDS
TATTTAATGAGGCTATTCAT+TGG 0.437891 8.4:+16441026 MS.gene80610:CDS
GGTTTCAATGCTCATTGATC+CGG 0.441203 8.4:+16440874 MS.gene80610:CDS
CTTAGGCTGCTCATCCTCAA+TGG 0.445603 8.4:-16440993 None:intergenic
TTAAATAGCAACCCCGGCTT+AGG 0.449345 8.4:-16441010 None:intergenic
AACTTGACTATTGTGGTTTG+TGG 0.450962 8.4:+16441155 MS.gene80610:CDS
AACCACAATAGTCAAGTTGA+TGG 0.467522 8.4:-16441150 None:intergenic
ATTTCTTAGTTTATGGGCTA+AGG 0.469399 8.4:+16441189 MS.gene80610:CDS
TGTCTTTGATTTAACGGAAA+GGG 0.470268 8.4:+16441093 MS.gene80610:CDS
TAATGAGGCTATTCATTGGT+TGG 0.476284 8.4:+16441030 MS.gene80610:CDS
AGTTGATGGTCAAACTCATC+TGG 0.476777 8.4:-16441136 None:intergenic
TACCTCTGGAATCCATCTAC+TGG 0.477589 8.4:+16440752 MS.gene80610:CDS
TTAGGCTGCTCATCCTCAAT+GGG 0.484131 8.4:-16440992 None:intergenic
GTTATCCAAACAAATACCTC+TGG 0.486229 8.4:+16440738 MS.gene80610:CDS
GAGGATGAGCAGCCTAAGCC+GGG 0.489365 8.4:+16440998 MS.gene80610:CDS
TGAGGATGAGCAGCCTAAGC+CGG 0.491054 8.4:+16440997 MS.gene80610:CDS
AAGTGGTGATATTATTGAAA+CGG 0.495211 8.4:+16441342 MS.gene80610:CDS
CATGCATGCTTCTTCCTCCA+TGG 0.499331 8.4:-16440396 None:intergenic
GGGATCCATGTGAATCGTTA+CGG 0.503698 8.4:-16441426 None:intergenic
ACTTGACTATTGTGGTTTGT+GGG 0.504506 8.4:+16441156 MS.gene80610:CDS
CTGGAACCAAAAGGAGAGAA+AGG 0.506844 8.4:-16440791 None:intergenic
CTGCTTTCACTTCCTTGTGA+CGG 0.517412 8.4:+16441472 MS.gene80610:CDS
CCGTTATAGCAATCCCATTG+AGG 0.526015 8.4:+16440979 MS.gene80610:CDS
AACAGATAATCATCCGTTGA+CGG 0.531319 8.4:-16440851 None:intergenic
GCCGGGGTTGCTATTTAATG+AGG 0.531997 8.4:+16441015 MS.gene80610:CDS
GTTGATATGAATAAAACTCT+AGG 0.534411 8.4:-16440563 None:intergenic
GCATATAAACTGGAACCAAA+AGG 0.540603 8.4:-16440800 None:intergenic
GACCATCAACTTGACTATTG+TGG 0.546126 8.4:+16441148 MS.gene80610:CDS
CATGGAGGAAGAAGCATGCA+TGG 0.555067 8.4:+16440397 None:intergenic
TTGTCTTTGATTTAACGGAA+AGG 0.568763 8.4:+16441092 MS.gene80610:CDS
TGAGTCTTAGTCCAAGATGA+AGG 0.569111 8.4:-16441262 None:intergenic
GTCAACGGATGATTATCTGT+TGG 0.589875 8.4:+16440853 MS.gene80610:CDS
GAAATTAAAGGCTCATGCAG+AGG 0.590051 8.4:+16440698 MS.gene80610:CDS
GTGGAAAGAAATTGAGATCG+AGG 0.598854 8.4:+16440946 MS.gene80610:CDS
TGGAAAGAAATTGAGATCGA+GGG 0.601685 8.4:+16440947 MS.gene80610:CDS
GCCTCATTAAATAGCAACCC+CGG 0.605181 8.4:-16441016 None:intergenic
AACGGATGGTGATACTGGAT+TGG 0.615798 8.4:+16441360 MS.gene80610:CDS
AATGGAGAAAAGTAATCTGT+CGG 0.624209 8.4:-16441307 None:intergenic
TCCATGTGAATCGTTACGGA+AGG 0.624637 8.4:-16441422 None:intergenic
AAACGTATAAGAGACTTCAC+CGG 0.625176 8.4:-16440461 None:intergenic
CTCGGTATATATAGCCACAT+GGG 0.627450 8.4:-16441446 None:intergenic
AGGAAGTGAAAGCAGAGACT+CGG 0.631955 8.4:-16441464 None:intergenic
GGTGATATTATTGAAACGGA+TGG 0.636455 8.4:+16441346 MS.gene80610:CDS
TAAGCTTGTTAACCGTCACA+AGG 0.637901 8.4:-16441484 None:intergenic
ACTCGGTATATATAGCCACA+TGG 0.649360 8.4:-16441447 None:intergenic
ATTTGAATCATCAACTCATG+AGG 0.658303 8.4:-16440425 None:intergenic
TCTCGTTGAGAGGTAATACG+TGG 0.672155 8.4:+16440927 MS.gene80610:CDS
TCCTTCCGTAACGATTCACA+TGG 0.681722 8.4:+16441421 MS.gene80610:CDS
CGATTCACATGGATCCCATG+TGG 0.708556 8.4:+16441432 MS.gene80610:CDS
ATCCAGTAGATGGATTCCAG+AGG 0.715335 8.4:-16440754 None:intergenic
AGGATGAGCAGCCTAAGCCG+GGG 0.728363 8.4:+16440999 MS.gene80610:CDS
TTGGTGAAGTCTGATGACAA+AGG 0.797487 8.4:+16441379 MS.gene80610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTGATACAATTGAAATA+TGG + chr8.4:16441218-16441237 MS.gene80610:CDS 15.0%
!! TATCTAAATCTTGAAATTAA+AGG + chr8.4:16440686-16440705 MS.gene80610:CDS 15.0%
!! TATTGATACAATTGAAATAT+GGG + chr8.4:16441219-16441238 MS.gene80610:CDS 15.0%
!! AAAATGTGAATTAGCAAAAT+TGG - chr8.4:16440528-16440547 None:intergenic 20.0%
!!! TATTGTTGTCTTTGATTTAA+CGG + chr8.4:16441087-16441106 MS.gene80610:CDS 20.0%
!!! TTATATGCAGAATATTTCTA+TGG + chr8.4:16440815-16440834 MS.gene80610:CDS 20.0%
! AAGTGGTGATATTATTGAAA+CGG + chr8.4:16441342-16441361 MS.gene80610:CDS 25.0%
! GAAATATTCTGCATATAAAC+TGG - chr8.4:16440813-16440832 None:intergenic 25.0%
! GTTGATATGAATAAAACTCT+AGG - chr8.4:16440566-16440585 None:intergenic 25.0%
! TACTAATATTTCATCGCAAT+TGG + chr8.4:16440898-16440917 MS.gene80610:CDS 25.0%
! TATTTAATGAGGCTATTCAT+TGG + chr8.4:16441026-16441045 MS.gene80610:CDS 25.0%
! TCAAGATTTAGATAAGATTC+AGG - chr8.4:16440680-16440699 None:intergenic 25.0%
! TCATGATTCACGTTTATTAA+GGG + chr8.4:16441060-16441079 MS.gene80610:CDS 25.0%
! TGGAGAATTTCTTAGTTTAT+GGG + chr8.4:16441183-16441202 MS.gene80610:CDS 25.0%
! TTGGAGAATTTCTTAGTTTA+TGG + chr8.4:16441182-16441201 MS.gene80610:CDS 25.0%
!!! CAGAATATTTCTATGGTTTT+GGG + chr8.4:16440822-16440841 MS.gene80610:CDS 25.0%
AATACAAAATGCCTTCATCT+TGG + chr8.4:16441251-16441270 MS.gene80610:CDS 30.0%
AATGGAGAAAAGTAATCTGT+CGG - chr8.4:16441310-16441329 None:intergenic 30.0%
ATTTGAATCATCAACTCATG+AGG - chr8.4:16440428-16440447 None:intergenic 30.0%
GTCATGATTCACGTTTATTA+AGG + chr8.4:16441059-16441078 MS.gene80610:CDS 30.0%
TGATGATTCAAATCCTTCTA+AGG + chr8.4:16440435-16440454 MS.gene80610:CDS 30.0%
TGCGATGAAATATTAGTAAC+CGG - chr8.4:16440896-16440915 None:intergenic 30.0%
! ATTTCTTAGTTTATGGGCTA+AGG + chr8.4:16441189-16441208 MS.gene80610:CDS 30.0%
! TGTCTTTGATTTAACGGAAA+GGG + chr8.4:16441093-16441112 MS.gene80610:CDS 30.0%
! TTGTCTTTGATTTAACGGAA+AGG + chr8.4:16441092-16441111 MS.gene80610:CDS 30.0%
!! GCAGAATATTTCTATGGTTT+TGG + chr8.4:16440821-16440840 MS.gene80610:CDS 30.0%
AAACGTATAAGAGACTTCAC+CGG - chr8.4:16440464-16440483 None:intergenic 35.0%
AACAGATAATCATCCGTTGA+CGG - chr8.4:16440854-16440873 None:intergenic 35.0%
AACTTGACTATTGTGGTTTG+TGG + chr8.4:16441155-16441174 MS.gene80610:CDS 35.0%
CCATTGTGTTGTACAAAAAG+TGG + chr8.4:16441325-16441344 MS.gene80610:CDS 35.0%
GCATATAAACTGGAACCAAA+AGG - chr8.4:16440803-16440822 None:intergenic 35.0%
GGTGATATTATTGAAACGGA+TGG + chr8.4:16441346-16441365 MS.gene80610:CDS 35.0%
GTTATCCAAACAAATACCTC+TGG + chr8.4:16440738-16440757 MS.gene80610:CDS 35.0%
TAATGAGGCTATTCATTGGT+TGG + chr8.4:16441030-16441049 MS.gene80610:CDS 35.0%
TCAAATGCGTTTCTAAGTCT+TGG + chr8.4:16440483-16440502 MS.gene80610:CDS 35.0%
TGGAAAGAAATTGAGATCGA+GGG + chr8.4:16440947-16440966 MS.gene80610:CDS 35.0%
TGTTTGTGAAATCCAGTAGA+TGG - chr8.4:16440767-16440786 None:intergenic 35.0%
! ACTTGACTATTGTGGTTTGT+GGG + chr8.4:16441156-16441175 MS.gene80610:CDS 35.0%
! CAAATACCTTTCTCTCCTTT+TGG + chr8.4:16440785-16440804 MS.gene80610:CDS 35.0%
! GGAAAGGGAACTTTTTGATA+TGG + chr8.4:16441108-16441127 MS.gene80610:CDS 35.0%
! TATTGTGGTTTGTGGGTATT+TGG + chr8.4:16441163-16441182 MS.gene80610:CDS 35.0%
!! AACCACAATAGTCAAGTTGA+TGG - chr8.4:16441153-16441172 None:intergenic 35.0%
!! TCAAATCCTTCTAAGGTTAC+CGG + chr8.4:16440442-16440461 MS.gene80610:CDS 35.0%
!!! CCACTTTTTGTACAACACAA+TGG - chr8.4:16441328-16441347 None:intergenic 35.0%
ACTCGGTATATATAGCCACA+TGG - chr8.4:16441450-16441469 None:intergenic 40.0%
ATTGAAACGGATGGTGATAC+TGG + chr8.4:16441355-16441374 MS.gene80610:CDS 40.0%
CCTCAATGGGATTGCTATAA+CGG - chr8.4:16440982-16441001 None:intergenic 40.0%
CTCGGTATATATAGCCACAT+GGG - chr8.4:16441449-16441468 None:intergenic 40.0%
GAAATTAAAGGCTCATGCAG+AGG + chr8.4:16440698-16440717 MS.gene80610:CDS 40.0%
GACCATCAACTTGACTATTG+TGG + chr8.4:16441148-16441167 MS.gene80610:CDS 40.0%
GGTTTCAATGCTCATTGATC+CGG + chr8.4:16440874-16440893 MS.gene80610:CDS 40.0%
GTCAACGGATGATTATCTGT+TGG + chr8.4:16440853-16440872 MS.gene80610:CDS 40.0%
GTGGAAAGAAATTGAGATCG+AGG + chr8.4:16440946-16440965 MS.gene80610:CDS 40.0%
TGAGTCTTAGTCCAAGATGA+AGG - chr8.4:16441265-16441284 None:intergenic 40.0%
TTGGTGAAGTCTGATGACAA+AGG + chr8.4:16441379-16441398 MS.gene80610:CDS 40.0%
! TTGGAGTTTTTCTCGTTGAG+AGG + chr8.4:16440917-16440936 MS.gene80610:CDS 40.0%
!! AGTTGATGGTCAAACTCATC+TGG - chr8.4:16441139-16441158 None:intergenic 40.0%
!! GGATTCCAGAGGTATTTGTT+TGG - chr8.4:16440746-16440765 None:intergenic 40.0%
!!! TTTTGGGTTTGATCCGTCAA+CGG + chr8.4:16440838-16440857 MS.gene80610:CDS 40.0%
AACGGATGGTGATACTGGAT+TGG + chr8.4:16441360-16441379 MS.gene80610:CDS 45.0%
ACTTCACCGGTAACCTTAGA+AGG - chr8.4:16440451-16440470 None:intergenic 45.0%
AGGAAGTGAAAGCAGAGACT+CGG - chr8.4:16441467-16441486 None:intergenic 45.0%
CCGTTATAGCAATCCCATTG+AGG + chr8.4:16440979-16440998 MS.gene80610:CDS 45.0%
CTGCTTTCACTTCCTTGTGA+CGG + chr8.4:16441472-16441491 MS.gene80610:CDS 45.0%
CTGGAACCAAAAGGAGAGAA+AGG - chr8.4:16440794-16440813 None:intergenic 45.0%
GCCTCATTAAATAGCAACCC+CGG - chr8.4:16441019-16441038 None:intergenic 45.0%
GGGATCCATGTGAATCGTTA+CGG - chr8.4:16441429-16441448 None:intergenic 45.0%
TCCATGTGAATCGTTACGGA+AGG - chr8.4:16441425-16441444 None:intergenic 45.0%
TCCTTCCGTAACGATTCACA+TGG + chr8.4:16441421-16441440 MS.gene80610:CDS 45.0%
TCTCGTTGAGAGGTAATACG+TGG + chr8.4:16440927-16440946 MS.gene80610:CDS 45.0%
TTAAATAGCAACCCCGGCTT+AGG - chr8.4:16441013-16441032 None:intergenic 45.0%
TTAGGCTGCTCATCCTCAAT+GGG - chr8.4:16440995-16441014 None:intergenic 45.0%
! ATCCAGTAGATGGATTCCAG+AGG - chr8.4:16440757-16440776 None:intergenic 45.0%
!! TACCTCTGGAATCCATCTAC+TGG + chr8.4:16440752-16440771 MS.gene80610:CDS 45.0%
CGATTCACATGGATCCCATG+TGG + chr8.4:16441432-16441451 MS.gene80610:CDS 50.0%
CTTAGGCTGCTCATCCTCAA+TGG - chr8.4:16440996-16441015 None:intergenic 50.0%
!! GCCGGGGTTGCTATTTAATG+AGG + chr8.4:16441015-16441034 MS.gene80610:CDS 50.0%
TGAGGATGAGCAGCCTAAGC+CGG + chr8.4:16440997-16441016 MS.gene80610:CDS 55.0%
AGGATGAGCAGCCTAAGCCG+GGG + chr8.4:16440999-16441018 MS.gene80610:CDS 60.0%
GAGGATGAGCAGCCTAAGCC+GGG + chr8.4:16440998-16441017 MS.gene80610:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 16440398 16441498 16440398 ID=MS.gene80610
chr8.4 mRNA 16440398 16441498 16440398 ID=MS.gene80610.t1;Parent=MS.gene80610
chr8.4 exon 16440398 16441498 16440398 ID=MS.gene80610.t1.exon1;Parent=MS.gene80610.t1
chr8.4 CDS 16440398 16441498 16440398 ID=cds.MS.gene80610.t1;Parent=MS.gene80610.t1
Gene Sequence

>MS.gene80610

ATGGAGGAAGAAGCATGCATGGATCTACCTCATGAGTTGATGATTCAAATCCTTCTAAGGTTACCGGTGAAGTCTCTTATACGTTTCAAATGCGTTTCTAAGTCTTGGTTTTCTCTTATCTCTGATACCAATTTTGCTAATTCACATTTTCAAATTACACACACTCCTAGAGTTTTATTCATATCAACATCAACTTGTGAAACTCGATCTATAGATTTTGAATCATCGCTTAACGACGATGATTCTGTTTCTGCTTCACTCAATCTTGATTTTCTGCTTCCTGAATCTTATCTAAATCTTGAAATTAAAGGCTCATGCAGAGGCTTCATATTTTTGCACTGTTATCCAAACAAATACCTCTGGAATCCATCTACTGGATTTCACAAACAAATACCTTTCTCTCCTTTTGGTTCCAGTTTATATGCAGAATATTTCTATGGTTTTGGGTTTGATCCGTCAACGGATGATTATCTGTTGGTTTCAATGCTCATTGATCCGGTTACTAATATTTCATCGCAATTGGAGTTTTTCTCGTTGAGAGGTAATACGTGGAAAGAAATTGAGATCGAGGGTAGTCATTTCCGTTATAGCAATCCCATTGAGGATGAGCAGCCTAAGCCGGGGTTGCTATTTAATGAGGCTATTCATTGGTTGGCTTATCGTCATGATTCACGTTTATTAAGGGATGTTATTGTTGTCTTTGATTTAACGGAAAGGGAACTTTTTGATATGGATTTGCCAGATGAGTTTGACCATCAACTTGACTATTGTGGTTTGTGGGTATTTGGAGAATTTCTTAGTTTATGGGCTAAGGATTGTTATATTGATACAATTGAAATATGGGTGATGAAAGAATACAAAATGCCTTCATCTTGGACTAAGACTCATGTTCTGTCTTTTGATAGTATGCCGACAGATTACTTTTCTCCATTGTGTTGTACAAAAAGTGGTGATATTATTGAAACGGATGGTGATACTGGATTGGTGAAGTCTGATGACAAAGGACAACTGCTTGAGCATCTCTCCTTCCGTAACGATTCACATGGATCCCATGTGGCTATATATACCGAGTCTCTGCTTTCACTTCCTTGTGACGGTTAA

Protein sequence

>MS.gene80610.t1

MEEEACMDLPHELMIQILLRLPVKSLIRFKCVSKSWFSLISDTNFANSHFQITHTPRVLFISTSTCETRSIDFESSLNDDDSVSASLNLDFLLPESYLNLEIKGSCRGFIFLHCYPNKYLWNPSTGFHKQIPFSPFGSSLYAEYFYGFGFDPSTDDYLLVSMLIDPVTNISSQLEFFSLRGNTWKEIEIEGSHFRYSNPIEDEQPKPGLLFNEAIHWLAYRHDSRLLRDVIVVFDLTERELFDMDLPDEFDHQLDYCGLWVFGEFLSLWAKDCYIDTIEIWVMKEYKMPSSWTKTHVLSFDSMPTDYFSPLCCTKSGDIIETDGDTGLVKSDDKGQLLEHLSFRNDSHGSHVAIYTESLLSLPCDG