AlfalfaGEDB | MS.gene57717

M. sativa cultivar XinJiangDaYe / MS.gene57717

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57717.t1	PNX93073.1	60.8	212	78	3	2	211	37	245	5.80E-63	250.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57717.t1	Q8GXC7	28.5	207	127	8	6	203	225	419	2.4e-09	63.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57717.t1	A0A2K3MQI9	60.8	212	78	3	2	211	37	245	4.2e-63	250.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene87573	MS.gene57717	PPI
MS.gene041491	MS.gene57717	PPI
MS.gene57717	MS.gene57532	PPI
MS.gene019504	MS.gene57717	PPI
MS.gene57717	MS.gene033442	PPI
MS.gene034762	MS.gene57717	PPI
MS.gene059096	MS.gene57717	PPI
MS.gene57717	MS.gene009892	PPI
MS.gene50297	MS.gene57717	PPI
MS.gene006711	MS.gene57717	PPI
MS.gene57717	MS.gene058669	PPI
MS.gene27285	MS.gene57717	PPI
MS.gene57717	MS.gene066120	PPI
MS.gene58716	MS.gene57717	PPI
MS.gene68580	MS.gene57717	PPI
MS.gene033444	MS.gene57717	PPI
MS.gene019505	MS.gene57717	PPI
MS.gene58785	MS.gene57717	PPI
MS.gene034690	MS.gene57717	PPI
MS.gene57717	MS.gene041489	PPI
MS.gene066639	MS.gene57717	PPI
MS.gene26949	MS.gene57717	PPI
MS.gene57717	MS.gene024000	PPI
MS.gene57717	MS.gene034688	PPI
MS.gene96407	MS.gene57717	PPI
MS.gene50309	MS.gene57717	PPI
MS.gene036760	MS.gene57717	PPI
MS.gene57717	MS.gene24213	PPI
MS.gene77857	MS.gene57717	PPI
MS.gene58311	MS.gene57717	PPI
MS.gene57717	MS.gene033079	PPI
MS.gene57717	MS.gene034677	PPI
MS.gene57527	MS.gene57717	PPI
MS.gene57717	MS.gene055694	PPI
MS.gene57717	MS.gene059101	PPI
MS.gene57717	MS.gene035238	PPI
MS.gene033426	MS.gene57717	PPI
MS.gene57717	MS.gene064114	PPI
MS.gene59639	MS.gene57717	PPI
MS.gene57717	MS.gene87584	PPI
MS.gene50298	MS.gene57717	PPI
MS.gene67687	MS.gene57717	PPI
MS.gene57717	MS.gene58315	PPI
MS.gene035261	MS.gene57717	PPI
MS.gene57717	MS.gene80610	PPI
MS.gene063670	MS.gene57717	PPI
MS.gene57717	MS.gene90743	PPI
MS.gene066626	MS.gene57717	PPI
MS.gene019506	MS.gene57717	PPI
MS.gene57717	MS.gene85454	PPI
MS.gene058692	MS.gene57717	PPI
MS.gene033083	MS.gene57717	PPI
MS.gene69309	MS.gene57717	PPI
MS.gene63658	MS.gene57717	PPI
MS.gene024002	MS.gene57717	PPI
MS.gene034686	MS.gene57717	PPI
MS.gene40982	MS.gene57717	PPI
MS.gene070461	MS.gene57717	PPI
MS.gene57717	MS.gene058701	PPI
MS.gene57717	MS.gene064083	PPI
MS.gene57717	MS.gene58783	PPI
MS.gene57717	MS.gene024420	PPI
MS.gene036662	MS.gene57717	PPI
MS.gene87563	MS.gene57717	PPI
MS.gene57717	MS.gene024008	PPI
MS.gene57717	MS.gene50337	PPI
MS.gene033431	MS.gene57717	PPI
MS.gene24212	MS.gene57717	PPI
MS.gene57717	MS.gene54541	PPI
MS.gene57717	MS.gene39265	PPI
MS.gene051820	MS.gene57717	PPI
MS.gene041475	MS.gene57717	PPI
MS.gene57717	MS.gene053299	PPI
MS.gene57717	MS.gene28758	PPI
MS.gene57717	MS.gene044429	PPI
MS.gene57717	MS.gene42451	PPI
MS.gene81242	MS.gene57717	PPI
MS.gene27283	MS.gene57717	PPI
MS.gene64203	MS.gene57717	PPI
MS.gene045140	MS.gene57717	PPI
MS.gene024004	MS.gene57717	PPI
MS.gene42444	MS.gene57717	PPI
MS.gene57717	MS.gene69307	PPI
MS.gene51202	MS.gene57717	PPI
MS.gene059101	MS.gene57717	PPI
MS.gene87562	MS.gene57717	PPI
MS.gene26829	MS.gene57717	PPI
MS.gene064104	MS.gene57717	PPI
MS.gene033443	MS.gene57717	PPI
MS.gene54049	MS.gene57717	PPI
MS.gene50337	MS.gene57717	PPI
MS.gene43789	MS.gene57717	PPI
MS.gene57528	MS.gene57717	PPI
MS.gene57717	MS.gene40878	PPI
MS.gene57717	MS.gene44428	PPI
MS.gene072177	MS.gene57717	PPI
MS.gene58722	MS.gene57717	PPI
MS.gene064091	MS.gene57717	PPI
MS.gene064112	MS.gene57717	PPI
MS.gene045476	MS.gene57717	PPI
MS.gene57717	MS.gene035235	PPI
MS.gene24208	MS.gene57717	PPI
MS.gene57717	MS.gene058703	PPI
MS.gene50307	MS.gene57717	PPI
MS.gene24213	MS.gene57717	PPI
MS.gene43796	MS.gene57717	PPI
MS.gene044429	MS.gene57717	PPI
MS.gene58312	MS.gene57717	PPI
MS.gene57717	MS.gene012215	PPI
MS.gene51191	MS.gene57717	PPI
MS.gene58313	MS.gene57717	PPI
MS.gene57717	MS.gene22715	PPI
MS.gene57717	MS.gene58316	PPI
MS.gene066622	MS.gene57717	PPI
MS.gene44887	MS.gene57717	PPI
MS.gene85043	MS.gene57717	PPI
MS.gene39265	MS.gene57717	PPI
MS.gene57717	MS.gene51207	PPI
MS.gene033430	MS.gene57717	PPI
MS.gene57717	MS.gene58321	PPI
MS.gene57717	MS.gene87564	PPI
MS.gene57717	MS.gene36595	PPI
MS.gene036583	MS.gene57717	PPI
MS.gene88780	MS.gene57717	PPI
MS.gene87588	MS.gene57717	PPI
MS.gene055694	MS.gene57717	PPI
MS.gene57717	MS.gene061240	PPI
MS.gene57717	MS.gene041473	PPI
MS.gene71159	MS.gene57717	PPI
MS.gene96448	MS.gene57717	PPI
MS.gene77858	MS.gene57717	PPI
MS.gene041392	MS.gene57717	PPI
MS.gene57717	MS.gene058989	PPI
MS.gene57717	MS.gene036556	PPI
MS.gene58317	MS.gene57717	PPI
MS.gene069075	MS.gene57717	PPI
MS.gene57717	MS.gene57538	PPI
MS.gene57717	MS.gene041468	PPI
MS.gene033081	MS.gene57717	PPI
MS.gene57717	MS.gene058693	PPI
MS.gene57717	MS.gene27319	PPI
MS.gene57717	MS.gene041395	PPI
MS.gene031591	MS.gene57717	PPI
MS.gene57717	MS.gene42447	PPI
MS.gene57717	MS.gene51189	PPI
MS.gene035262	MS.gene57717	PPI
MS.gene51199	MS.gene57717	PPI
MS.gene58321	MS.gene57717	PPI
MS.gene062698	MS.gene57717	PPI
MS.gene57536	MS.gene57717	PPI
MS.gene96126	MS.gene57717	PPI
MS.gene019503	MS.gene57717	PPI
MS.gene57717	MS.gene044425	PPI
MS.gene016524	MS.gene57717	PPI
MS.gene87559	MS.gene57717	PPI
MS.gene50304	MS.gene57717	PPI
MS.gene57717	MS.gene40988	PPI
MS.gene59943	MS.gene57717	PPI
MS.gene57717	MS.gene24173	PPI
MS.gene57717	MS.gene036584	PPI
MS.gene31587	MS.gene57717	PPI
MS.gene041393	MS.gene57717	PPI
MS.gene033441	MS.gene57717	PPI
MS.gene57717	MS.gene27022	PPI
MS.gene57717	MS.gene87585	PPI
MS.gene063826	MS.gene57717	PPI
MS.gene57717	MS.gene023999	PPI
MS.gene060367	MS.gene57717	PPI
MS.gene44892	MS.gene57717	PPI
MS.gene58239	MS.gene57717	PPI
MS.gene066641	MS.gene57717	PPI
MS.gene57717	MS.gene036581	PPI
MS.gene57717	MS.gene019507	PPI
MS.gene000038	MS.gene57717	PPI
MS.gene57531	MS.gene57717	PPI
MS.gene064111	MS.gene57717	PPI
MS.gene57717	MS.gene000036	PPI
MS.gene39262	MS.gene57717	PPI
MS.gene57717	MS.gene50320	PPI
MS.gene053256	MS.gene57717	PPI
MS.gene57717	MS.gene58314	PPI
MS.gene025887	MS.gene57717	PPI
MS.gene57717	MS.gene87557	PPI
MS.gene019507	MS.gene57717	PPI
MS.gene75875	MS.gene57717	PPI
MS.gene57717	MS.gene035263	PPI
MS.gene041470	MS.gene57717	PPI
MS.gene57717	MS.gene67501	PPI
MS.gene058694	MS.gene57717	PPI
MS.gene064090	MS.gene57717	PPI
MS.gene57717	MS.gene96406	PPI
MS.gene57717	MS.gene053257	PPI
MS.gene058701	MS.gene57717	PPI
MS.gene57717	MS.gene51201	PPI
MS.gene015089	MS.gene57717	PPI
MS.gene006710	MS.gene57717	PPI
MS.gene57717	MS.gene50336	PPI
MS.gene90743	MS.gene57717	PPI
MS.gene57717	MS.gene77704	PPI
MS.gene011679	MS.gene57717	PPI
MS.gene033079	MS.gene57717	PPI
MS.gene64001	MS.gene57717	PPI
MS.gene57533	MS.gene57717	PPI
MS.gene57717	MS.gene047279	PPI
MS.gene57717	MS.gene50305	PPI
MS.gene36704	MS.gene57717	PPI
MS.gene032970	MS.gene57717	PPI
MS.gene57717	MS.gene032969	PPI
MS.gene57717	MS.gene68890	PPI
MS.gene77856	MS.gene57717	PPI
MS.gene57717	MS.gene42445	PPI
MS.gene57717	MS.gene86273	PPI
MS.gene036556	MS.gene57717	PPI
MS.gene57717	MS.gene26830	PPI
MS.gene40887	MS.gene57717	PPI
MS.gene034688	MS.gene57717	PPI
MS.gene51188	MS.gene57717	PPI
MS.gene63655	MS.gene57717	PPI
MS.gene57717	MS.gene63657	PPI
MS.gene44883	MS.gene57717	PPI
MS.gene57717	MS.gene059157	PPI
MS.gene57717	MS.gene023996	PPI
MS.gene57717	MS.gene045473	PPI
MS.gene57717	MS.gene50301	PPI
MS.gene57717	MS.gene070462	PPI
MS.gene41046	MS.gene57717	PPI
MS.gene017412	MS.gene57717	PPI
MS.gene57529	MS.gene57717	PPI
MS.gene57717	MS.gene031590	PPI
MS.gene80884	MS.gene57717	PPI
MS.gene57717	MS.gene066623	PPI
MS.gene51192	MS.gene57717	PPI
MS.gene009883	MS.gene57717	PPI
MS.gene57717	MS.gene064086	PPI
MS.gene57717	MS.gene035234	PPI
MS.gene57717	MS.gene064090	PPI
MS.gene40886	MS.gene57717	PPI
MS.gene044563	MS.gene57717	PPI
MS.gene033427	MS.gene57717	PPI
MS.gene27051	MS.gene57717	PPI
MS.gene57717	MS.gene90742	PPI
MS.gene40985	MS.gene57717	PPI
MS.gene57717	MS.gene24212	PPI
MS.gene060368	MS.gene57717	PPI
MS.gene041474	MS.gene57717	PPI
MS.gene57717	MS.gene50332	PPI
MS.gene57717	MS.gene024979	PPI
MS.gene27020	MS.gene57717	PPI
MS.gene066620	MS.gene57717	PPI
MS.gene035236	MS.gene57717	PPI
MS.gene041388	MS.gene57717	PPI
MS.gene57717	MS.gene24826	PPI
MS.gene059157	MS.gene57717	PPI
MS.gene51208	MS.gene57717	PPI
MS.gene57717	MS.gene43790	PPI
MS.gene045475	MS.gene57717	PPI
MS.gene88776	MS.gene57717	PPI
MS.gene57717	MS.gene59637	PPI
MS.gene35068	MS.gene57717	PPI
MS.gene90744	MS.gene57717	PPI
MS.gene51204	MS.gene57717	PPI
MS.gene036557	MS.gene57717	PPI
MS.gene50329	MS.gene57717	PPI
MS.gene57717	MS.gene88416	PPI
MS.gene070462	MS.gene57717	PPI
MS.gene31637	MS.gene57717	PPI
MS.gene57717	MS.gene003076	PPI
MS.gene57537	MS.gene57717	PPI
MS.gene57717	MS.gene024009	PPI
MS.gene57717	MS.gene036599	PPI
MS.gene059156	MS.gene57717	PPI
MS.gene84698	MS.gene57717	PPI
MS.gene57717	MS.gene006705	PPI
MS.gene009891	MS.gene57717	PPI
MS.gene57717	MS.gene061241	PPI
MS.gene82082	MS.gene57717	PPI
MS.gene57717	MS.gene035237	PPI
MS.gene50306	MS.gene57717	PPI
MS.gene57717	MS.gene51188	PPI
MS.gene57717	MS.gene38220	PPI
MS.gene57717	MS.gene40986	PPI
MS.gene57535	MS.gene57717	PPI
MS.gene57717	MS.gene041394	PPI
MS.gene57717	MS.gene03060	PPI
MS.gene57717	MS.gene036664	PPI
MS.gene57717	MS.gene024011	PPI
MS.gene87200	MS.gene57717	PPI
MS.gene57717	MS.gene58241	PPI
MS.gene57717	MS.gene064109	PPI
MS.gene033432	MS.gene57717	PPI
MS.gene57717	MS.gene058696	PPI
MS.gene57717	MS.gene009893	PPI
MS.gene44885	MS.gene57717	PPI
MS.gene060370	MS.gene57717	PPI
MS.gene50327	MS.gene57717	PPI
MS.gene066635	MS.gene57717	PPI
MS.gene010758	MS.gene57717	PPI
MS.gene87586	MS.gene57717	PPI
MS.gene57530	MS.gene57717	PPI
MS.gene57717	MS.gene40886	PPI
MS.gene50326	MS.gene57717	PPI
MS.gene57717	MS.gene036663	PPI
MS.gene57717	MS.gene68580	PPI
MS.gene51200	MS.gene57717	PPI
MS.gene50339	MS.gene57717	PPI
MS.gene57717	MS.gene041391	PPI
MS.gene046958	MS.gene57717	PPI
MS.gene57717	MS.gene57525	PPI
MS.gene060366	MS.gene57717	PPI
MS.gene88774	MS.gene57717	PPI
MS.gene57717	MS.gene030114	PPI
MS.gene57717	MS.gene045474	PPI
MS.gene42452	MS.gene57717	PPI
MS.gene57717	MS.gene036558	PPI
MS.gene063414	MS.gene57717	PPI
MS.gene57717	MS.gene87554	PPI
MS.gene57717	MS.gene40984	PPI
MS.gene57717	MS.gene064108	PPI
MS.gene57717	MS.gene048193	PPI
MS.gene57717	MS.gene016220	PPI
MS.gene40902	MS.gene57717	PPI
MS.gene57717	MS.gene50311	PPI
MS.gene57526	MS.gene57717	PPI
MS.gene021553	MS.gene57717	PPI
MS.gene26957	MS.gene57717	PPI
MS.gene033875	MS.gene57717	PPI
MS.gene97996	MS.gene57717	PPI
MS.gene036582	MS.gene57717	PPI
MS.gene27021	MS.gene57717	PPI
MS.gene035235	MS.gene57717	PPI
MS.gene58320	MS.gene57717	PPI
MS.gene26101	MS.gene57717	PPI
MS.gene57717	MS.gene58240	PPI
MS.gene57717	MS.gene27284	PPI
MS.gene57717	MS.gene063472	PPI
MS.gene58781	MS.gene57717	PPI
MS.gene57717	MS.gene034680	PPI
MS.gene028390	MS.gene57717	PPI
MS.gene011106	MS.gene57717	PPI
MS.gene033440	MS.gene57717	PPI
MS.gene62398	MS.gene57717	PPI
MS.gene57717	MS.gene48221	PPI
MS.gene60027	MS.gene57717	PPI
MS.gene44886	MS.gene57717	PPI
MS.gene066623	MS.gene57717	PPI
MS.gene038756	MS.gene57717	PPI
MS.gene57717	MS.gene066626	PPI
MS.gene40904	MS.gene57717	PPI
MS.gene041390	MS.gene57717	PPI
MS.gene24286	MS.gene57717	PPI
MS.gene92376	MS.gene57717	PPI
MS.gene57717	MS.gene063474	PPI
MS.gene57717	MS.gene51190	PPI
MS.gene000035	MS.gene57717	PPI
MS.gene57717	MS.gene58319	PPI
MS.gene57717	MS.gene044426	PPI
MS.gene87569	MS.gene57717	PPI
MS.gene57717	MS.gene034681	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57717.t1	MTR_3g103020	59.346	214	79	4	1	211	170	378	1.53e-72	224
MS.gene57717.t1	MTR_4g109270	58.416	202	81	2	11	211	165	364	3.75e-72	223
MS.gene57717.t1	MTR_4g109280	59.898	197	72	4	17	211	168	359	5.13e-72	223
MS.gene57717.t1	MTR_4g117720	60.092	218	73	8	1	211	168	378	2.97e-70	219
MS.gene57717.t1	MTR_4g094365	58.000	200	78	3	14	211	169	364	3.77e-70	218
MS.gene57717.t1	MTR_4g116320	58.586	198	71	4	15	208	65	255	2.62e-69	213
MS.gene57717.t1	MTR_4g117850	55.769	208	86	3	1	204	168	373	2.12e-68	214
MS.gene57717.t1	MTR_6g060650	58.462	195	76	3	16	210	183	372	2.76e-68	213
MS.gene57717.t1	MTR_8g040935	54.717	212	88	4	4	211	1	208	7.07e-68	207
MS.gene57717.t1	MTR_8g433030	57.416	209	78	6	1	206	137	337	7.22e-68	211
MS.gene57717.t1	MTR_8g032390	57.416	209	78	6	1	206	170	370	2.96e-67	211
MS.gene57717.t1	MTR_4g023130	56.075	214	80	6	4	210	106	312	3.27e-67	209
MS.gene57717.t1	MTR_4g116330	56.345	197	77	4	19	211	189	380	1.20e-65	207
MS.gene57717.t1	MTR_4g122850	54.884	215	87	6	1	211	156	364	2.28e-65	206
MS.gene57717.t1	MTR_4g117770	56.000	200	83	2	15	211	170	367	3.27e-65	205
MS.gene57717.t1	MTR_4g117810	56.000	200	83	2	15	211	170	367	3.27e-65	205
MS.gene57717.t1	MTR_4g023080	54.717	212	82	6	6	210	149	353	6.09e-65	204
MS.gene57717.t1	MTR_4g117530	54.639	194	52	4	18	211	96	253	2.66e-63	197
MS.gene57717.t1	MTR_6g463430	50.239	209	96	2	4	211	1	202	2.79e-63	195
MS.gene57717.t1	MTR_4g117780	54.000	200	87	2	15	211	170	367	3.99e-63	200
MS.gene57717.t1	MTR_3g034180	53.670	218	88	5	1	210	276	488	6.02e-61	197
MS.gene57717.t1	MTR_4g023190	53.488	215	85	7	4	209	149	357	1.03e-60	194
MS.gene57717.t1	MTR_8g433040	54.680	203	75	5	11	211	177	364	1.10e-59	191
MS.gene57717.t1	MTR_8g032380	54.680	203	75	5	11	211	177	364	1.10e-59	191
MS.gene57717.t1	MTR_4g118400	57.368	190	64	5	16	205	122	294	2.36e-59	188
MS.gene57717.t1	MTR_4g023380	49.130	230	82	7	6	211	161	379	4.38e-58	187
MS.gene57717.t1	MTR_4g021785	50.000	212	95	4	6	211	149	355	6.55e-58	186
MS.gene57717.t1	MTR_4g023070	49.099	222	97	5	1	210	152	369	1.77e-57	186
MS.gene57717.t1	MTR_1g055175	48.611	216	91	7	1	211	1	201	6.97e-57	179
MS.gene57717.t1	MTR_4g023090	48.430	223	91	6	1	209	170	382	2.89e-56	183
MS.gene57717.t1	MTR_4g023120	49.327	223	97	6	1	211	152	370	1.01e-55	181
MS.gene57717.t1	MTR_4g023150	52.093	215	85	8	6	209	151	358	1.73e-55	180
MS.gene57717.t1	MTR_4g118380	53.886	193	73	5	1	184	172	357	3.11e-55	179
MS.gene57717.t1	MTR_3g034160	55.446	202	79	4	15	210	178	374	1.28e-54	178
MS.gene57717.t1	MTR_4g023200	50.230	217	90	8	4	209	149	358	2.62e-54	177
MS.gene57717.t1	MTR_3g034130	50.244	205	90	4	1	197	162	362	9.99e-53	173
MS.gene57717.t1	MTR_4g117750	48.182	220	98	6	1	210	145	358	8.37e-52	174
MS.gene57717.t1	MTR_4g117750	59.459	111	43	1	99	209	373	481	4.04e-33	124
MS.gene57717.t1	MTR_4g118370	47.393	211	85	5	1	208	70	257	1.24e-51	167
MS.gene57717.t1	MTR_5g097210	49.282	209	99	4	1	207	156	359	3.56e-50	167
MS.gene57717.t1	MTR_1g055165	52.542	177	76	5	37	211	148	318	2.52e-49	163
MS.gene57717.t1	MTR_5g070080	49.763	211	96	7	4	211	183	386	1.81e-48	163
MS.gene57717.t1	MTR_4g117870	46.445	211	72	5	1	211	98	267	6.45e-48	158
MS.gene57717.t1	MTR_1g055195	48.529	204	88	6	18	211	282	478	9.74e-48	163
MS.gene57717.t1	MTR_4g023440	46.226	212	65	7	1	211	169	332	6.55e-47	157
MS.gene57717.t1	MTR_1g055135	43.636	220	109	7	1	211	162	375	1.09e-44	152
MS.gene57717.t1	MTR_5g070088	45.283	212	103	4	1	206	176	380	1.22e-44	153
MS.gene57717.t1	MTR_4g116330	45.685	197	59	6	19	211	189	341	5.16e-42	145
MS.gene57717.t1	MTR_5g070130	43.333	210	96	5	17	211	176	377	6.12e-39	138
MS.gene57717.t1	MTR_8g102520	40.455	220	112	8	1	211	113	322	1.73e-38	135
MS.gene57717.t1	MTR_7g079400	44.340	212	94	11	14	211	136	337	1.17e-37	133
MS.gene57717.t1	MTR_5g023000	66.000	100	32	2	112	211	2	99	4.68e-37	125
MS.gene57717.t1	MTR_4g122860	42.268	194	76	7	24	211	157	320	2.42e-36	130
MS.gene57717.t1	MTR_1g055250	43.229	192	89	8	15	198	74	253	2.88e-35	127
MS.gene57717.t1	MTR_4g117430	59.000	100	39	1	11	110	57	154	1.25e-34	120
MS.gene57717.t1	MTR_7g079370	42.512	207	100	8	6	205	156	350	5.30e-34	124
MS.gene57717.t1	MTR_4g118360	58.261	115	40	3	99	211	18	126	1.44e-32	114
MS.gene57717.t1	MTR_8g098830	42.775	173	83	7	15	180	31	194	2.56e-32	117
MS.gene57717.t1	MTR_4g114700	40.526	190	59	4	17	202	79	218	1.77e-31	115
MS.gene57717.t1	MTR_4g121580	44.211	190	69	7	16	201	183	339	1.50e-30	115
MS.gene57717.t1	MTR_2g048580	36.239	218	115	8	3	211	140	342	6.49e-30	113
MS.gene57717.t1	MTR_7g079450	45.833	144	67	5	70	211	3	137	1.73e-29	107
MS.gene57717.t1	MTR_7g079420	38.830	188	96	7	34	211	966	1144	2.37e-25	103
MS.gene57717.t1	MTR_8g013010	49.533	107	49	2	2	108	208	309	1.80e-24	98.6
MS.gene57717.t1	MTR_8g013005	71.186	59	17	0	153	211	1	59	7.87e-21	82.4
MS.gene57717.t1	MTR_7g117720	57.778	90	32	3	122	207	186	273	3.05e-19	83.6
MS.gene57717.t1	MTR_4g122840	40.580	138	44	3	75	211	164	264	3.62e-19	83.2
MS.gene57717.t1	MTR_4g023430	39.860	143	64	5	79	211	92	222	1.26e-16	75.5
MS.gene57717.t1	MTR_4g116340	50.685	73	35	1	2	74	176	247	2.01e-16	75.5
MS.gene57717.t1	MTR_6g034720	46.835	79	41	1	1	79	86	163	1.32e-15	72.8
MS.gene57717.t1	MTR_4g109290	66.038	53	18	0	159	211	136	188	8.88e-14	67.4
MS.gene57717.t1	MTR_1g094210	30.769	169	96	8	20	180	221	376	1.51e-13	68.9
MS.gene57717.t1	MTR_1g094210	30.675	163	92	8	20	174	221	370	1.43e-12	65.9
MS.gene57717.t1	MTR_0097s0030	27.879	165	104	6	10	162	174	335	3.18e-12	65.1
MS.gene57717.t1	MTR_2g047240	27.879	165	104	6	10	162	174	335	3.18e-12	65.1
MS.gene57717.t1	MTR_6g088385	27.014	211	126	8	17	205	116	320	3.21e-12	64.7
MS.gene57717.t1	MTR_0667s0010	30.065	153	88	7	18	159	183	327	3.42e-12	65.1
MS.gene57717.t1	MTR_8g099460	27.950	161	109	4	1	159	167	322	1.01e-11	63.5
MS.gene57717.t1	MTR_2g064960	69.048	42	13	0	170	211	18	59	1.08e-11	58.5
MS.gene57717.t1	MTR_4g023100	60.000	55	20	1	156	210	66	118	1.95e-11	59.3
MS.gene57717.t1	MTR_3g010970	28.191	188	113	7	23	203	219	391	2.54e-11	62.4
MS.gene57717.t1	MTR_7g055830	26.786	224	130	7	17	207	138	360	3.09e-11	62.0
MS.gene57717.t1	MTR_1g055145	48.649	74	36	2	52	125	131	202	3.65e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57717.t1	AT3G06240	28.750	160	99	5	6	160	225	374	8.68e-11	60.8

Find 41 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATTCTGGTTTGTGGGTATT+TGG	0.119331	8.3:+8794683	MS.gene57717:CDS
ATTCTGGTTTGTGGGTATTT+GGG	0.224908	8.3:+8794684	MS.gene57717:CDS
TAATACATGGAAAGAAATTA+AGG	0.236785	8.3:+8794475	MS.gene57717:CDS
GACAATATACTTGACTATTC+TGG	0.288946	8.3:+8794668	MS.gene57717:CDS
ATAATCATACGGTTGAAATA+TGG	0.292170	8.3:+8794738	MS.gene57717:CDS
AGCTACTGTTTCATCACATT+TGG	0.319260	8.3:+8794433	MS.gene57717:CDS
TACAGAATGGGATTGCTATA+AGG	0.332225	8.3:-8794509	None:intergenic
GTTAAAGAGCAACCCTGCTT+TGG	0.343363	8.3:-8794537	None:intergenic
CTCATTAACATTGGCATCAA+TGG	0.363458	8.3:-8794813	None:intergenic
ACAGAATGGGATTGCTATAA+GGG	0.374494	8.3:-8794508	None:intergenic
TTAAAGAGCAACCCTGCTTT+GGG	0.384566	8.3:-8794536	None:intergenic
ATTGGAACATGTGGTGGTAT+TGG	0.396640	8.3:+8794881	MS.gene57717:CDS
TACTTGACTATTCTGGTTTG+TGG	0.398497	8.3:+8794675	MS.gene57717:CDS
TAATCATACGGTTGAAATAT+GGG	0.438296	8.3:+8794739	MS.gene57717:CDS
AATACAAAGTGCATTCATCT+TGG	0.440860	8.3:+8794771	MS.gene57717:CDS
AGTATATTGTCAAACTCATC+TGG	0.441674	8.3:-8794656	None:intergenic
ACTTGACTATTCTGGTTTGT+GGG	0.445951	8.3:+8794676	MS.gene57717:CDS
TTCTGGTTTGTGGGTATTTG+GGG	0.446634	8.3:+8794685	MS.gene57717:CDS
TTGCCTTTGATTTAATGAAA+AGG	0.452967	8.3:+8794612	MS.gene57717:CDS
TAACGAGGCTATTCATTGGT+TGG	0.473376	8.3:+8794556	MS.gene57717:CDS
TGCTTTGGGCTGATACAGAA+TGG	0.489790	8.3:-8794522	None:intergenic
TCTCGTTGAAAGATAATACA+TGG	0.498466	8.3:+8794462	MS.gene57717:CDS
TCTTTAACGAGGCTATTCAT+TGG	0.501818	8.3:+8794552	MS.gene57717:CDS
ATTCTGTATCAGCCCAAAGC+AGG	0.503682	8.3:+8794524	MS.gene57717:CDS
AATACATGGAAAGAAATTAA+GGG	0.504563	8.3:+8794476	MS.gene57717:CDS
GAGTCTCTGCTCTCACTCCC+TGG	0.513546	8.3:+8794992	MS.gene57717:CDS
GCTTTGGGCTGATACAGAAT+GGG	0.513590	8.3:-8794521	None:intergenic
GGGATTCACGTGAATCGTTA+CGG	0.517791	8.3:-8794952	None:intergenic
ATGTGATGAAACAGTAGCTA+AGG	0.533173	8.3:-8794429	None:intergenic
TAAGCTTGTTCACTTTCACC+AGG	0.543687	8.3:-8795010	None:intergenic
CTCTGTATACATAGCCACTT+GGG	0.546267	8.3:-8794972	None:intergenic
AGAAAGAGACTCATTAACAT+TGG	0.571014	8.3:-8794822	None:intergenic
AACATGTGGTGGTATTGGAT+TGG	0.578026	8.3:+8794886	MS.gene57717:CDS
AAGCTTGTTCACTTTCACCA+GGG	0.593323	8.3:-8795009	None:intergenic
TTCTGTATCAGCCCAAAGCA+GGG	0.611541	8.3:+8794525	MS.gene57717:CDS
ACTCTGTATACATAGCCACT+TGG	0.613352	8.3:-8794973	None:intergenic
AGCAGGGTTGCTCTTTAACG+AGG	0.621468	8.3:+8794541	MS.gene57717:CDS
GGTGATATTATTGGAACATG+TGG	0.633288	8.3:+8794872	MS.gene57717:CDS
GATATTATTGGAACATGTGG+TGG	0.648140	8.3:+8794875	MS.gene57717:CDS
TTGGTGAAGTACAATGACAA+AGG	0.668246	8.3:+8794905	MS.gene57717:CDS
CGATTCACGTGAATCCCAAG+TGG	0.676953	8.3:+8794958	MS.gene57717:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAATAATTTTGATAATCATA+CGG	+	chr8.3:8794727-8794746	MS.gene57717:CDS	10.0%
!!	AATACATGGAAAGAAATTAA+GGG	+	chr8.3:8794476-8794495	MS.gene57717:CDS	20.0%
!!	TAATACATGGAAAGAAATTA+AGG	+	chr8.3:8794475-8794494	MS.gene57717:CDS	20.0%
!!!	TTTCCTTTTCATTAAATCAA+AGG	-	chr8.3:8794618-8794637	None:intergenic	20.0%
!	ATAATCATACGGTTGAAATA+TGG	+	chr8.3:8794738-8794757	MS.gene57717:CDS	25.0%
!	TAATCATACGGTTGAAATAT+GGG	+	chr8.3:8794739-8794758	MS.gene57717:CDS	25.0%
!!	TTGCCTTTGATTTAATGAAA+AGG	+	chr8.3:8794612-8794631	MS.gene57717:CDS	25.0%
	AATACAAAGTGCATTCATCT+TGG	+	chr8.3:8794771-8794790	MS.gene57717:CDS	30.0%
	AGAAAGAGACTCATTAACAT+TGG	-	chr8.3:8794825-8794844	None:intergenic	30.0%
	AGTATATTGTCAAACTCATC+TGG	-	chr8.3:8794659-8794678	None:intergenic	30.0%
	GACAATATACTTGACTATTC+TGG	+	chr8.3:8794668-8794687	MS.gene57717:CDS	30.0%
	GCAAAAAGTGGTGATATTAT+TGG	+	chr8.3:8794863-8794882	MS.gene57717:CDS	30.0%
	TCTCGTTGAAAGATAATACA+TGG	+	chr8.3:8794462-8794481	MS.gene57717:CDS	30.0%
	ACAGAATGGGATTGCTATAA+GGG	-	chr8.3:8794511-8794530	None:intergenic	35.0%
	AGCTACTGTTTCATCACATT+TGG	+	chr8.3:8794433-8794452	MS.gene57717:CDS	35.0%
	ATGTGATGAAACAGTAGCTA+AGG	-	chr8.3:8794432-8794451	None:intergenic	35.0%
	CTCATTAACATTGGCATCAA+TGG	-	chr8.3:8794816-8794835	None:intergenic	35.0%
	GATATTATTGGAACATGTGG+TGG	+	chr8.3:8794875-8794894	MS.gene57717:CDS	35.0%
	GGTGATATTATTGGAACATG+TGG	+	chr8.3:8794872-8794891	MS.gene57717:CDS	35.0%
	TACAGAATGGGATTGCTATA+AGG	-	chr8.3:8794512-8794531	None:intergenic	35.0%
	TCTTTAACGAGGCTATTCAT+TGG	+	chr8.3:8794552-8794571	MS.gene57717:CDS	35.0%
	TTGGTGAAGTACAATGACAA+AGG	+	chr8.3:8794905-8794924	MS.gene57717:CDS	35.0%
!	TAAGGTTTTACTTGCATCGT+AGG	-	chr8.3:8794414-8794433	None:intergenic	35.0%
!!	ACTTGACTATTCTGGTTTGT+GGG	+	chr8.3:8794676-8794695	MS.gene57717:CDS	35.0%
!!	ATTCTGGTTTGTGGGTATTT+GGG	+	chr8.3:8794684-8794703	MS.gene57717:CDS	35.0%
!!	TACTTGACTATTCTGGTTTG+TGG	+	chr8.3:8794675-8794694	MS.gene57717:CDS	35.0%
!!	TATTCTGGTTTGTGGGTATT+TGG	+	chr8.3:8794683-8794702	MS.gene57717:CDS	35.0%
	ACTCTGTATACATAGCCACT+TGG	-	chr8.3:8794976-8794995	None:intergenic	40.0%
	ATTGGAACATGTGGTGGTAT+TGG	+	chr8.3:8794881-8794900	MS.gene57717:CDS	40.0%
	CTCTGTATACATAGCCACTT+GGG	-	chr8.3:8794975-8794994	None:intergenic	40.0%
	TAACGAGGCTATTCATTGGT+TGG	+	chr8.3:8794556-8794575	MS.gene57717:CDS	40.0%
	TTAAAGAGCAACCCTGCTTT+GGG	-	chr8.3:8794539-8794558	None:intergenic	40.0%
!	AACATGTGGTGGTATTGGAT+TGG	+	chr8.3:8794886-8794905	MS.gene57717:CDS	40.0%
!	AAGCTTGTTCACTTTCACCA+GGG	-	chr8.3:8795012-8795031	None:intergenic	40.0%
!	ACTTTTTGCACAGCACAATG+GGG	-	chr8.3:8794852-8794871	None:intergenic	40.0%
!	TAAGCTTGTTCACTTTCACC+AGG	-	chr8.3:8795013-8795032	None:intergenic	40.0%
!!	CACTTTTTGCACAGCACAAT+GGG	-	chr8.3:8794853-8794872	None:intergenic	40.0%
!!	TTCTGGTTTGTGGGTATTTG+GGG	+	chr8.3:8794685-8794704	MS.gene57717:CDS	40.0%
	ATTCTGTATCAGCCCAAAGC+AGG	+	chr8.3:8794524-8794543	MS.gene57717:CDS	45.0%
	CCATTGTGCTGTGCAAAAAG+TGG	+	chr8.3:8794851-8794870	MS.gene57717:CDS	45.0%
	GGGATTCACGTGAATCGTTA+CGG	-	chr8.3:8794955-8794974	None:intergenic	45.0%
	GTTAAAGAGCAACCCTGCTT+TGG	-	chr8.3:8794540-8794559	None:intergenic	45.0%
	TTCTGTATCAGCCCAAAGCA+GGG	+	chr8.3:8794525-8794544	MS.gene57717:CDS	45.0%
!	GCTTTGGGCTGATACAGAAT+GGG	-	chr8.3:8794524-8794543	None:intergenic	45.0%
!	TGCTTTGGGCTGATACAGAA+TGG	-	chr8.3:8794525-8794544	None:intergenic	45.0%
!!!	CCACTTTTTGCACAGCACAA+TGG	-	chr8.3:8794854-8794873	None:intergenic	45.0%
	AGCAGGGTTGCTCTTTAACG+AGG	+	chr8.3:8794541-8794560	MS.gene57717:CDS	50.0%
	CGATTCACGTGAATCCCAAG+TGG	+	chr8.3:8794958-8794977	MS.gene57717:CDS	50.0%
	GAGTCTCTGCTCTCACTCCC+TGG	+	chr8.3:8794992-8795011	MS.gene57717:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	8794398	8795033	8794398	ID=MS.gene57717
chr8.3	mRNA	8794398	8795033	8794398	ID=MS.gene57717.t1;Parent=MS.gene57717
chr8.3	exon	8794398	8795033	8794398	ID=MS.gene57717.t1.exon1;Parent=MS.gene57717.t1
chr8.3	CDS	8794398	8795033	8794398	ID=cds.MS.gene57717.t1;Parent=MS.gene57717.t1

Gene Sequence

>MS.gene57717

ATGGTTTTAATGTCCTACGATGCAAGTAAAACCTTAGCTACTGTTTCATCACATTTGGAATTTTTCTCGTTGAAAGATAATACATGGAAAGAAATTAAGGGTACTCACTTCCCTTATAGCAATCCCATTCTGTATCAGCCCAAAGCAGGGTTGCTCTTTAACGAGGCTATTCATTGGTTGGCTTATCATAATGATTTGCATCAGTATGTTGTTGTTGCCTTTGATTTAATGAAAAGGAAACTTTGCAATATGTATTTGCCAGATGAGTTTGACAATATACTTGACTATTCTGGTTTGTGGGTATTTGGGGAATTTCTCAGTTTTTCGTCTAATAATTTTGATAATCATACGGTTGAAATATGGGTGATGAAAGAATACAAAGTGCATTCATCTTGGACAAAGACTCATGTTCTGTCCATTGATGCCAATGTTAATGAGTCTCTTTCTTTTTCCCCATTGTGCTGTGCAAAAAGTGGTGATATTATTGGAACATGTGGTGGTATTGGATTGGTGAAGTACAATGACAAAGGACAGCTACTAGAGCATTGCTCTTACCGTAACGATTCACGTGAATCCCAAGTGGCTATGTATACAGAGTCTCTGCTCTCACTCCCTGGTGAAAGTGAACAAGCTTAA

Protein sequence

>MS.gene57717.t1

MVLMSYDASKTLATVSSHLEFFSLKDNTWKEIKGTHFPYSNPILYQPKAGLLFNEAIHWLAYHNDLHQYVVVAFDLMKRKLCNMYLPDEFDNILDYSGLWVFGEFLSFSSNNFDNHTVEIWVMKEYKVHSSWTKTHVLSIDANVNESLSFSPLCCAKSGDIIGTCGGIGLVKYNDKGQLLEHCSYRNDSRESQVAMYTESLLSLPGESEQA