AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016524


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016524.t1 MTR_4g117850 63.117 385 129 7 1 384 1 373 1.49e-158 451
MS.gene016524.t1 MTR_3g103020 57.841 389 145 10 1 386 1 373 1.26e-137 398
MS.gene016524.t1 MTR_4g117770 57.825 377 139 7 14 386 2 362 1.45e-132 384
MS.gene016524.t1 MTR_4g117810 57.825 377 139 7 14 386 2 362 1.45e-132 384
MS.gene016524.t1 MTR_4g117780 56.499 377 144 7 14 386 2 362 3.23e-130 379
MS.gene016524.t1 MTR_3g034180 54.774 398 154 12 2 388 104 486 6.10e-127 375
MS.gene016524.t1 MTR_4g109270 58.919 370 128 12 23 386 8 359 2.08e-124 363
MS.gene016524.t1 MTR_4g116330 50.995 402 158 11 5 391 3 380 6.37e-123 360
MS.gene016524.t1 MTR_4g023090 53.061 392 146 12 14 386 7 379 1.67e-121 357
MS.gene016524.t1 MTR_3g034160 55.469 384 147 10 16 388 2 372 1.45e-120 354
MS.gene016524.t1 MTR_3g034130 55.313 367 141 10 22 377 8 362 3.12e-119 350
MS.gene016524.t1 MTR_8g040935 81.281 203 36 2 184 386 3 203 7.61e-118 341
MS.gene016524.t1 MTR_4g021785 54.620 368 145 8 19 386 5 350 1.24e-117 346
MS.gene016524.t1 MTR_4g122850 54.696 362 143 11 34 387 12 360 1.36e-117 347
MS.gene016524.t1 MTR_6g060650 56.267 375 139 11 22 385 7 367 5.32e-116 342
MS.gene016524.t1 MTR_4g094365 53.930 369 148 12 22 385 7 358 3.36e-112 332
MS.gene016524.t1 MTR_4g109280 53.533 368 154 9 17 384 2 352 1.17e-111 331
MS.gene016524.t1 MTR_4g023080 53.351 373 147 12 16 386 2 349 2.43e-111 330
MS.gene016524.t1 MTR_4g118380 53.994 363 135 10 21 362 6 357 2.84e-109 325
MS.gene016524.t1 MTR_8g433040 52.105 380 149 11 12 386 8 359 3.07e-108 322
MS.gene016524.t1 MTR_8g032380 52.105 380 149 11 12 386 8 359 3.07e-108 322
MS.gene016524.t1 MTR_4g117720 51.613 372 126 11 22 387 50 373 1.18e-104 314
MS.gene016524.t1 MTR_4g023070 48.677 378 165 11 23 386 3 365 5.41e-103 309
MS.gene016524.t1 MTR_4g023380 49.622 397 143 11 14 385 7 371 8.41e-103 309
MS.gene016524.t1 MTR_5g070080 49.870 385 162 9 22 387 9 381 1.53e-102 308
MS.gene016524.t1 MTR_5g070088 47.938 388 176 6 18 387 2 381 7.97e-102 307
MS.gene016524.t1 MTR_8g032390 49.476 382 147 13 12 387 30 371 5.05e-101 304
MS.gene016524.t1 MTR_4g023120 47.884 378 168 11 23 386 3 365 8.06e-101 304
MS.gene016524.t1 MTR_5g097210 49.869 381 164 15 15 389 2 361 2.04e-100 303
MS.gene016524.t1 MTR_4g116330 45.274 402 142 10 5 391 3 341 1.50e-99 299
MS.gene016524.t1 MTR_4g023130 49.330 373 121 10 16 386 2 308 4.64e-99 297
MS.gene016524.t1 MTR_5g070130 49.340 379 175 7 14 385 2 370 1.27e-98 299
MS.gene016524.t1 MTR_1g055135 49.612 387 163 15 13 386 3 370 2.71e-98 297
MS.gene016524.t1 MTR_4g023440 47.757 379 142 10 9 386 4 327 2.05e-96 291
MS.gene016524.t1 MTR_4g023190 49.337 377 162 12 15 386 2 354 1.16e-94 287
MS.gene016524.t1 MTR_4g023150 49.202 376 165 11 15 386 2 355 2.94e-94 286
MS.gene016524.t1 MTR_4g023200 49.734 376 163 11 15 386 2 355 6.24e-93 283
MS.gene016524.t1 MTR_4g117750 48.663 374 160 12 22 385 2 353 3.79e-90 280
MS.gene016524.t1 MTR_4g117750 62.963 108 38 1 279 386 373 478 3.28e-34 132
MS.gene016524.t1 MTR_4g121580 46.438 379 151 12 14 381 2 339 3.95e-87 269
MS.gene016524.t1 MTR_8g433030 45.910 379 132 13 12 387 30 338 4.26e-84 260
MS.gene016524.t1 MTR_1g055165 45.283 371 139 11 18 386 5 313 2.22e-83 257
MS.gene016524.t1 MTR_8g013010 52.595 289 114 10 5 288 39 309 4.31e-82 254
MS.gene016524.t1 MTR_4g117870 47.573 309 112 9 80 386 2 262 5.19e-77 239
MS.gene016524.t1 MTR_1g055195 47.988 323 130 11 80 388 177 475 6.51e-73 235
MS.gene016524.t1 MTR_4g116320 55.760 217 89 4 169 385 43 252 8.23e-68 215
MS.gene016524.t1 MTR_4g118400 46.823 299 114 10 95 385 33 294 2.17e-67 215
MS.gene016524.t1 MTR_4g118370 47.451 255 101 8 137 388 33 257 4.05e-62 201
MS.gene016524.t1 MTR_7g079370 42.120 349 173 14 52 385 16 350 1.02e-61 202
MS.gene016524.t1 MTR_4g116340 47.843 255 100 9 6 253 19 247 3.34e-61 198
MS.gene016524.t1 MTR_7g079400 40.439 319 168 12 79 388 29 334 4.21e-58 192
MS.gene016524.t1 MTR_2g048580 36.579 380 179 19 22 387 7 338 7.11e-54 182
MS.gene016524.t1 MTR_8g102520 38.872 337 161 15 57 388 23 319 1.89e-50 172
MS.gene016524.t1 MTR_4g114700 39.773 264 99 6 125 382 9 218 2.30e-50 169
MS.gene016524.t1 MTR_6g463430 48.058 206 95 4 183 386 2 197 1.58e-48 163
MS.gene016524.t1 MTR_4g117430 54.878 164 60 5 125 288 3 152 7.90e-47 157
MS.gene016524.t1 MTR_4g117530 41.270 252 95 8 142 388 47 250 4.39e-45 156
MS.gene016524.t1 MTR_1g055250 42.449 245 114 10 143 378 27 253 1.01e-44 157
MS.gene016524.t1 MTR_1g055175 46.729 214 90 10 177 385 1 195 1.41e-41 145
MS.gene016524.t1 MTR_7g117720 46.341 205 82 6 15 214 2 183 3.45e-40 144
MS.gene016524.t1 MTR_7g117720 55.435 92 37 3 298 386 182 272 3.41e-19 87.0
MS.gene016524.t1 MTR_4g118360 54.615 130 53 3 264 391 1 126 4.42e-36 128
MS.gene016524.t1 MTR_4g109290 47.853 163 48 4 19 178 5 133 1.33e-34 126
MS.gene016524.t1 MTR_7g079420 34.286 280 126 12 124 388 905 1141 3.60e-32 129
MS.gene016524.t1 MTR_4g108820 30.503 318 168 12 8 323 27 293 1.95e-31 122
MS.gene016524.t1 MTR_2g021150 28.610 374 241 14 20 383 11 368 1.89e-30 120
MS.gene016524.t1 MTR_1g094210 28.302 371 226 12 3 361 37 379 2.39e-30 120
MS.gene016524.t1 MTR_4g107820 30.084 359 211 14 3 350 16 345 2.91e-30 120
MS.gene016524.t1 MTR_4g107780 30.084 359 211 14 3 350 16 345 2.91e-30 120
MS.gene016524.t1 MTR_5g069120 42.778 180 89 6 34 203 2 177 4.24e-30 114
MS.gene016524.t1 MTR_4g107780 30.084 359 211 14 3 350 16 345 4.94e-30 120
MS.gene016524.t1 MTR_4g107820 30.084 359 211 14 3 350 16 345 4.99e-30 120
MS.gene016524.t1 MTR_4g055060 32.133 361 195 19 18 352 25 361 1.84e-29 118
MS.gene016524.t1 MTR_1g094210 27.481 393 242 13 3 383 37 398 1.85e-29 118
MS.gene016524.t1 MTR_8g101580 26.738 374 249 10 17 383 39 394 2.60e-29 117
MS.gene016524.t1 MTR_5g057690 31.731 312 185 11 19 329 45 329 5.67e-29 116
MS.gene016524.t1 MTR_5g023000 58.947 95 37 1 292 386 2 94 7.58e-29 108
MS.gene016524.t1 MTR_5g022420 28.693 352 221 13 20 368 24 348 9.35e-29 115
MS.gene016524.t1 MTR_8g467140 28.395 324 210 9 6 323 15 322 9.58e-29 114
MS.gene016524.t1 MTR_1g097490 27.100 369 234 13 23 383 49 390 1.87e-28 115
MS.gene016524.t1 MTR_3g014540 31.085 341 190 14 9 326 5 323 2.61e-28 114
MS.gene016524.t1 MTR_4g122860 40.000 190 76 6 201 385 158 314 3.03e-28 113
MS.gene016524.t1 MTR_1g097330 28.824 340 204 12 20 350 13 323 1.68e-27 112
MS.gene016524.t1 MTR_2g426020 26.952 397 227 17 23 389 6 369 2.53e-26 109
MS.gene016524.t1 MTR_2g021155 30.671 313 187 11 17 319 30 322 3.26e-26 111
MS.gene016524.t1 MTR_3g014570 29.968 317 195 12 20 327 26 324 3.55e-26 108
MS.gene016524.t1 MTR_2g055970 26.632 383 250 10 11 383 199 560 4.55e-26 110
MS.gene016524.t1 MTR_5g057790 30.061 326 182 17 19 329 45 339 7.48e-26 108
MS.gene016524.t1 MTR_3g036430 27.297 381 207 16 19 383 16 342 8.38e-26 107
MS.gene016524.t1 MTR_2g029990 28.571 378 221 20 26 383 54 402 1.70e-25 107
MS.gene016524.t1 MTR_4g037465 29.630 378 213 16 4 349 2 358 1.80e-25 107
MS.gene016524.t1 MTR_7g070440 29.841 315 184 12 22 316 6 303 3.09e-25 105
MS.gene016524.t1 MTR_3g007330 31.348 319 185 14 20 329 45 338 4.65e-25 105
MS.gene016524.t1 MTR_3g036290 30.857 350 193 19 21 355 20 335 1.04e-24 104
MS.gene016524.t1 MTR_2g046900 28.571 315 197 10 21 323 26 324 1.26e-24 104
MS.gene016524.t1 MTR_2g021190 30.573 314 186 15 18 319 16 309 2.82e-24 103
MS.gene016524.t1 MTR_4g129190 26.329 414 224 17 23 384 6 390 3.31e-24 103
MS.gene016524.t1 MTR_4g133170 27.463 335 201 11 23 340 4 313 4.66e-24 102
MS.gene016524.t1 MTR_3g006670 31.169 308 178 13 20 314 46 332 5.38e-24 102
MS.gene016524.t1 MTR_8g098830 41.176 170 84 9 195 358 35 194 8.24e-24 99.0
MS.gene016524.t1 MTR_3g083640 27.202 386 224 17 20 383 52 402 9.48e-24 102
MS.gene016524.t1 MTR_3g011020 30.091 329 172 13 20 328 25 315 9.51e-24 101
MS.gene016524.t1 MTR_1g097560 27.586 348 208 16 23 357 36 352 1.79e-23 100
MS.gene016524.t1 MTR_3g013740 29.595 321 193 14 23 325 44 349 2.77e-23 100
MS.gene016524.t1 MTR_3g083010 26.098 410 230 16 23 389 6 385 6.44e-23 100
MS.gene016524.t1 MTR_3g007360 31.098 328 181 16 26 336 55 354 8.46e-23 99.4
MS.gene016524.t1 MTR_3g013770 29.969 327 186 13 19 326 29 331 8.51e-23 99.4
MS.gene016524.t1 MTR_3g023930 28.882 322 190 12 2 319 13 299 9.35e-23 99.0
MS.gene016524.t1 MTR_3g007410 30.994 342 186 17 26 345 55 368 9.41e-23 99.4
MS.gene016524.t1 MTR_1g068835 27.451 306 186 10 23 314 4 287 1.52e-22 98.6
MS.gene016524.t1 MTR_5g057710 30.124 322 183 15 19 327 45 337 1.60e-22 98.6
MS.gene016524.t1 MTR_4g023430 63.636 77 27 1 6 82 25 100 1.75e-22 95.1
MS.gene016524.t1 MTR_4g023430 47.525 101 48 2 289 386 119 217 2.67e-18 83.6
MS.gene016524.t1 MTR_2g046830 28.803 309 196 13 21 323 23 313 1.88e-22 98.6
MS.gene016524.t1 MTR_2g046920 27.848 316 190 13 21 323 22 312 2.03e-22 97.8
MS.gene016524.t1 MTR_6g034720 46.957 115 53 3 148 258 53 163 2.40e-22 94.7
MS.gene016524.t1 MTR_5g057020 30.351 313 183 13 19 329 45 324 4.76e-22 96.7
MS.gene016524.t1 MTR_4g013180 28.173 323 187 9 22 316 10 315 6.04e-22 97.8
MS.gene016524.t1 MTR_3g009310 27.070 314 186 9 17 314 36 322 9.98e-22 96.3
MS.gene016524.t1 MTR_2g028160 25.840 387 237 15 23 379 5 371 1.17e-21 96.3
MS.gene016524.t1 MTR_3g011060 28.955 335 185 13 20 327 25 333 1.95e-21 95.5
MS.gene016524.t1 MTR_2g047832 26.911 327 199 11 21 323 27 337 2.00e-21 95.5
MS.gene016524.t1 MTR_4g061340 28.487 337 197 14 7 325 10 320 3.06e-21 94.7
MS.gene016524.t1 MTR_2g025420 25.124 402 228 18 23 381 6 377 3.49e-21 95.1
MS.gene016524.t1 MTR_5g007610 28.115 313 193 10 18 314 36 332 4.07e-21 94.7
MS.gene016524.t1 MTR_7g407070 30.915 317 185 13 20 314 29 333 5.87e-21 94.0
MS.gene016524.t1 MTR_6g021880 26.790 377 225 15 33 383 30 381 6.46e-21 93.6
MS.gene016524.t1 MTR_5g059430 25.234 428 259 19 10 389 13 427 6.73e-21 94.4
MS.gene016524.t1 MTR_6g053260 25.938 320 215 8 7 319 321 625 8.36e-21 94.7
MS.gene016524.t1 MTR_5g011200 27.346 373 222 18 9 368 6 342 8.84e-21 93.2
MS.gene016524.t1 MTR_6g079810 24.829 439 263 16 2 388 40 463 1.18e-20 93.6
MS.gene016524.t1 MTR_5g069760 24.615 390 243 12 22 384 5 370 1.33e-20 92.8
MS.gene016524.t1 MTR_8g066440 24.205 409 278 10 1 384 1 402 1.62e-20 92.8
MS.gene016524.t1 MTR_1g050542 26.578 301 193 11 18 313 53 330 2.25e-20 92.4
MS.gene016524.t1 MTR_7g055987 29.080 337 191 14 26 338 23 335 2.29e-20 92.0
MS.gene016524.t1 MTR_7g079450 40.426 141 76 5 248 388 2 134 2.61e-20 86.7
MS.gene016524.t1 MTR_0064s0160 27.405 343 218 14 6 323 28 364 3.05e-20 92.4
MS.gene016524.t1 MTR_7g056503 25.823 395 243 15 22 383 20 397 3.31e-20 92.0
MS.gene016524.t1 MTR_4g030830 25.789 380 221 14 23 359 9 370 3.80e-20 91.7
MS.gene016524.t1 MTR_7g056760 28.367 349 201 13 8 323 6 338 3.81e-20 91.7
MS.gene016524.t1 MTR_4g024890 26.667 315 197 12 19 314 6 305 5.15e-20 91.3
MS.gene016524.t1 MTR_3g010390 28.443 334 186 14 20 322 30 341 5.26e-20 91.3
MS.gene016524.t1 MTR_7g056820 26.005 373 225 16 19 360 3 355 5.68e-20 90.9
MS.gene016524.t1 MTR_1g068875 25.595 336 207 12 23 340 4 314 7.07e-20 90.9
MS.gene016524.t1 MTR_6g086825 25.061 411 245 15 22 388 69 460 7.38e-20 91.3
MS.gene016524.t1 MTR_0044s0300 26.579 380 222 20 4 357 18 366 7.55e-20 90.9
MS.gene016524.t1 MTR_7g055930 26.494 385 200 12 23 340 13 381 9.24e-20 90.9
MS.gene016524.t1 MTR_7g061090 26.647 334 203 10 11 314 10 331 9.69e-20 90.5
MS.gene016524.t1 MTR_7g055870 28.165 387 191 16 23 340 13 381 1.01e-19 90.5
MS.gene016524.t1 MTR_2g078850 28.940 349 213 14 26 359 33 361 1.73e-19 89.4
MS.gene016524.t1 MTR_8g099460 25.879 313 191 11 23 314 5 297 1.80e-19 89.7
MS.gene016524.t1 MTR_2g047200 24.878 410 245 15 12 383 9 393 1.90e-19 89.7
MS.gene016524.t1 MTR_6g090180 25.355 422 245 16 11 384 35 434 2.28e-19 89.7
MS.gene016524.t1 MTR_0097s0030 28.363 342 201 14 23 340 14 335 2.36e-19 89.4
MS.gene016524.t1 MTR_2g047240 28.363 342 201 14 23 340 14 335 2.36e-19 89.4
MS.gene016524.t1 MTR_3g436150 30.769 312 186 14 20 314 29 327 2.40e-19 89.4
MS.gene016524.t1 MTR_7g070830 29.003 331 184 12 26 314 24 345 2.55e-19 89.4
MS.gene016524.t1 MTR_1g054575 25.392 319 196 12 18 323 47 336 3.41e-19 90.1
MS.gene016524.t1 MTR_7g091640 26.627 338 210 11 4 316 16 340 3.73e-19 88.6
MS.gene016524.t1 MTR_7g070880 26.772 381 223 14 7 340 4 375 4.15e-19 89.0
MS.gene016524.t1 MTR_2g426090 24.316 329 214 12 26 331 9 325 4.15e-19 88.6
MS.gene016524.t1 MTR_3g072470 29.042 334 174 12 23 316 19 329 5.59e-19 88.6
MS.gene016524.t1 MTR_7g067680 28.012 332 178 14 4 319 30 316 5.76e-19 88.2
MS.gene016524.t1 MTR_1g088120 28.313 332 184 11 22 316 9 323 5.87e-19 88.2
MS.gene016524.t1 MTR_6g007135 24.852 338 218 11 1 319 1 321 6.34e-19 88.2
MS.gene016524.t1 MTR_2g026010 26.852 324 201 12 26 331 7 312 7.40e-19 87.8
MS.gene016524.t1 MTR_3g030250 26.440 382 227 15 20 383 34 379 7.47e-19 87.8
MS.gene016524.t1 MTR_3g464470 25.490 408 224 14 22 383 6 379 9.19e-19 87.4
MS.gene016524.t1 MTR_3g010430 26.857 350 194 14 5 322 7 326 1.02e-18 87.8
MS.gene016524.t1 MTR_6g027910 25.635 394 240 15 19 383 5 374 1.02e-18 87.4
MS.gene016524.t1 MTR_2g028130 25.707 389 237 18 23 381 5 371 1.26e-18 87.4
MS.gene016524.t1 MTR_6g080680 26.650 394 218 16 30 382 26 389 1.36e-18 87.0
MS.gene016524.t1 MTR_8g073550 35.882 170 92 5 20 180 27 188 1.37e-18 84.7
MS.gene016524.t1 MTR_7g078040 29.762 336 185 11 23 316 9 335 1.41e-18 87.4
MS.gene016524.t1 MTR_2g043410 27.027 370 200 15 19 340 18 365 1.44e-18 87.0
MS.gene016524.t1 MTR_7g445890 28.481 316 170 12 23 314 16 299 1.58e-18 86.7
MS.gene016524.t1 MTR_3g010520 25.846 325 199 12 1 319 3 291 1.64e-18 86.7
MS.gene016524.t1 MTR_5g043160 25.753 365 209 14 24 336 51 405 1.65e-18 87.4
MS.gene016524.t1 MTR_4g028660 24.578 415 251 13 10 384 3 395 1.66e-18 87.0
MS.gene016524.t1 MTR_4g027450 24.578 415 251 13 10 384 3 395 1.66e-18 87.0
MS.gene016524.t1 MTR_7g061060 28.025 314 190 8 22 314 12 310 1.67e-18 87.0
MS.gene016524.t1 MTR_0054s0090 24.413 426 258 19 6 388 2 406 2.01e-18 86.7
MS.gene016524.t1 MTR_7g077970 27.273 396 243 13 20 379 4 390 2.30e-18 86.7
MS.gene016524.t1 MTR_4g070550 25.688 327 188 13 23 314 5 311 2.47e-18 86.3
MS.gene016524.t1 MTR_1g054725 25.558 403 239 18 9 383 6 375 2.51e-18 86.3
MS.gene016524.t1 MTR_3g010590 26.074 326 197 13 3 319 21 311 2.93e-18 85.9
MS.gene016524.t1 MTR_7g017040 24.439 401 244 13 22 384 15 394 3.01e-18 86.3
MS.gene016524.t1 MTR_4g129160 28.533 375 207 17 23 358 7 359 3.13e-18 85.5
MS.gene016524.t1 MTR_0667s0010 26.462 325 178 14 23 314 6 302 3.19e-18 86.3
MS.gene016524.t1 MTR_1g056710 30.802 237 139 12 11 238 25 245 3.23e-18 85.9
MS.gene016524.t1 MTR_0242s0060 30.154 325 187 14 22 316 8 322 3.23e-18 86.3
MS.gene016524.t1 MTR_0242s0040 30.154 325 187 14 22 316 8 322 3.23e-18 86.3
MS.gene016524.t1 MTR_6g053240 24.534 322 196 11 20 319 25 321 3.42e-18 85.9
MS.gene016524.t1 MTR_5g008530 68.966 58 16 1 23 80 18 73 4.66e-18 78.6
MS.gene016524.t1 MTR_2g078900 29.231 325 183 17 20 327 30 324 5.36e-18 85.1
MS.gene016524.t1 MTR_2g028110 27.273 319 176 13 23 314 4 293 5.58e-18 85.1
MS.gene016524.t1 MTR_2g426070 26.706 337 199 12 26 331 9 328 5.98e-18 85.1
MS.gene016524.t1 MTR_0128s0010 26.190 336 225 10 9 329 7 334 6.01e-18 85.1
MS.gene016524.t1 MTR_7g056003 27.621 391 198 16 23 358 15 375 6.23e-18 85.1
MS.gene016524.t1 MTR_7g056200 25.352 355 188 12 22 340 22 335 6.53e-18 85.1
MS.gene016524.t1 MTR_1g055070 28.421 285 179 12 15 281 41 318 7.78e-18 84.7
MS.gene016524.t1 MTR_5g068040 27.027 333 184 13 10 316 2 301 8.20e-18 84.7
MS.gene016524.t1 MTR_1g055200 53.165 79 33 2 121 198 5 80 1.46e-17 78.2
MS.gene016524.t1 MTR_5g097350 26.425 386 224 16 32 384 25 383 1.52e-17 84.0
MS.gene016524.t1 MTR_3g010870 26.752 314 185 12 20 319 34 316 1.64e-17 84.0
MS.gene016524.t1 MTR_3g010620 25.243 309 187 10 20 319 33 306 1.67e-17 84.0
MS.gene016524.t1 MTR_7g091630 26.048 334 221 9 4 316 13 341 1.73e-17 84.0
MS.gene016524.t1 MTR_5g069930 24.058 345 221 11 22 340 5 334 1.83e-17 83.6
MS.gene016524.t1 MTR_2g043400 26.829 369 202 12 19 340 19 366 2.19e-17 83.6
MS.gene016524.t1 MTR_3g006500 24.872 390 247 12 13 383 7 369 2.70e-17 83.2
MS.gene016524.t1 MTR_1g068860 26.645 304 193 10 23 314 4 289 2.72e-17 83.2
MS.gene016524.t1 MTR_3g009260 28.395 324 156 13 20 314 38 314 2.73e-17 83.2
MS.gene016524.t1 MTR_2g028140 25.460 326 196 12 23 314 5 317 3.06e-17 83.2
MS.gene016524.t1 MTR_5g037680 26.933 375 215 21 22 359 7 359 3.37e-17 83.2
MS.gene016524.t1 MTR_3g006530 25.974 385 241 15 19 383 36 396 3.46e-17 82.8
MS.gene016524.t1 MTR_8g013005 66.071 56 17 1 331 386 1 54 3.73e-17 75.5
MS.gene016524.t1 MTR_0464s0020 28.614 339 185 13 19 316 19 341 4.37e-17 82.8
MS.gene016524.t1 MTR_3g024110 25.205 365 228 13 20 377 98 424 4.47e-17 82.8
MS.gene016524.t1 MTR_3g007430 28.852 305 175 13 26 314 46 324 5.03e-17 82.4
MS.gene016524.t1 MTR_3g006570 26.633 398 231 19 14 383 12 376 5.37e-17 82.4
MS.gene016524.t1 MTR_3g030350 26.154 390 231 18 20 383 32 390 5.75e-17 82.4
MS.gene016524.t1 MTR_5g057643 30.769 234 127 12 19 238 45 257 6.87e-17 80.5
MS.gene016524.t1 MTR_7g057270 26.183 317 205 11 23 316 26 336 6.95e-17 82.0
MS.gene016524.t1 MTR_3g011100 29.968 317 173 15 20 314 232 521 8.10e-17 82.8
MS.gene016524.t1 MTR_0128s0020 26.409 337 207 9 4 318 2 319 9.20e-17 81.6
MS.gene016524.t1 MTR_3g007270 26.075 372 205 14 19 362 43 372 9.68e-17 81.6
MS.gene016524.t1 MTR_4g033495 25.610 410 234 18 23 388 27 409 9.89e-17 82.0
MS.gene016524.t1 MTR_4g080200 26.519 362 203 14 23 360 3 325 9.97e-17 81.3
MS.gene016524.t1 MTR_7g078860 28.571 343 202 11 22 335 8 336 1.56e-16 80.9
MS.gene016524.t1 MTR_3g009240 28.707 317 167 14 20 314 33 312 1.58e-16 80.9
MS.gene016524.t1 MTR_2g021770 25.238 420 250 13 16 388 5 407 1.62e-16 80.9
MS.gene016524.t1 MTR_0760s0010 25.405 370 230 13 28 383 52 389 1.68e-16 80.9
MS.gene016524.t1 MTR_6g065980 26.263 297 188 11 21 314 14 282 1.91e-16 80.5
MS.gene016524.t1 MTR_8g464770 24.041 391 246 13 22 385 11 377 2.07e-16 80.5
MS.gene016524.t1 MTR_7g013590 25.672 335 222 8 2 323 9 329 2.15e-16 80.5
MS.gene016524.t1 MTR_0054s0100 24.396 414 245 19 22 388 16 408 2.29e-16 80.5
MS.gene016524.t1 MTR_2g021210 28.344 314 188 13 15 319 76 361 2.38e-16 80.5
MS.gene016524.t1 MTR_2g031680 25.904 332 200 13 18 331 4 307 2.62e-16 80.1
MS.gene016524.t1 MTR_7g078900 26.741 359 206 12 19 335 7 350 2.68e-16 80.5
MS.gene016524.t1 MTR_2g047892 24.703 421 248 20 6 383 2 396 2.85e-16 80.1
MS.gene016524.t1 MTR_2g461450 26.557 305 198 11 14 314 9 291 2.85e-16 79.7
MS.gene016524.t1 MTR_5g069390 25.416 421 260 20 8 388 11 417 4.88e-16 80.1
MS.gene016524.t1 MTR_7g050520 26.923 338 192 11 5 314 2 312 5.07e-16 79.3
MS.gene016524.t1 MTR_0115s0020 24.439 401 265 15 19 388 6 399 5.21e-16 79.3
MS.gene016524.t1 MTR_5g009060 30.330 333 178 19 20 314 22 338 5.78e-16 79.3
MS.gene016524.t1 MTR_2g031720 25.915 328 205 12 23 331 6 314 5.83e-16 79.3
MS.gene016524.t1 MTR_1g115185 25.915 328 207 13 6 319 22 327 5.87e-16 79.3
MS.gene016524.t1 MTR_4g013185 26.113 337 197 9 22 316 9 335 6.08e-16 79.3
MS.gene016524.t1 MTR_5g096710 27.515 338 185 14 23 327 23 333 7.30e-16 79.0
MS.gene016524.t1 MTR_8g046310 22.864 398 262 10 9 385 2 375 7.65e-16 79.0
MS.gene016524.t1 MTR_4g028750 26.582 395 220 18 10 363 3 368 8.70e-16 79.0
MS.gene016524.t1 MTR_7g028660 28.080 349 199 14 22 340 10 336 9.49e-16 78.6
MS.gene016524.t1 MTR_7g022600 26.593 361 202 15 5 318 2 346 1.05e-15 78.6
MS.gene016524.t1 MTR_7g078840 25.833 360 201 12 22 329 9 354 1.35e-15 78.6
MS.gene016524.t1 MTR_7g055977 25.360 347 217 9 22 340 6 338 1.37e-15 78.2
MS.gene016524.t1 MTR_6g016285 25.697 323 198 9 26 318 24 334 1.41e-15 78.6
MS.gene016524.t1 MTR_7g062060 25.740 338 214 12 22 328 11 342 1.49e-15 78.2
MS.gene016524.t1 MTR_3g011650 37.126 167 89 6 20 179 76 233 1.57e-15 76.6
MS.gene016524.t1 MTR_7g056710 26.781 351 208 13 22 344 17 346 1.58e-15 77.8
MS.gene016524.t1 MTR_6g013270 26.816 358 221 14 4 340 5 342 1.59e-15 77.8
MS.gene016524.t1 MTR_7g060940 25.893 336 201 9 8 316 7 321 1.61e-15 77.8
MS.gene016524.t1 MTR_3g464500 24.590 427 243 17 5 383 7 402 1.90e-15 77.8
MS.gene016524.t1 MTR_0128s0070 25.266 376 231 11 12 353 9 368 1.92e-15 77.8
MS.gene016524.t1 MTR_7g052150 24.471 331 210 10 7 316 6 317 1.96e-15 77.8
MS.gene016524.t1 MTR_5g097680 25.909 440 243 21 13 388 7 427 2.08e-15 77.8
MS.gene016524.t1 MTR_5g048160 26.205 332 212 12 23 323 4 333 2.58e-15 77.4
MS.gene016524.t1 MTR_3g010970 26.087 322 159 15 26 319 51 321 2.73e-15 77.0
MS.gene016524.t1 MTR_6g004660 26.935 323 177 16 23 314 16 310 3.03e-15 77.0
MS.gene016524.t1 MTR_3g024040 29.260 311 172 15 30 327 38 313 3.09e-15 77.0
MS.gene016524.t1 MTR_2g021050 26.045 311 177 13 23 314 5 281 3.15e-15 77.0
MS.gene016524.t1 MTR_7g066100 26.284 331 187 10 22 314 10 321 3.19e-15 77.0
MS.gene016524.t1 MTR_7g060960 28.296 311 160 12 23 316 32 296 3.41e-15 76.6
MS.gene016524.t1 MTR_3g437520 26.077 418 212 17 19 360 19 415 3.77e-15 77.0
MS.gene016524.t1 MTR_3g024150 26.302 384 221 17 26 383 38 385 5.03e-15 76.3
MS.gene016524.t1 MTR_4g030760 25.890 309 192 11 17 314 67 349 5.12e-15 76.6
MS.gene016524.t1 MTR_3g058480 32.870 216 103 9 20 209 36 235 6.43e-15 75.5
MS.gene016524.t1 MTR_6g017280 25.796 314 207 7 20 316 6 310 6.80e-15 75.9
MS.gene016524.t1 MTR_1g053510 24.306 432 241 18 10 385 2 403 8.76e-15 75.9
MS.gene016524.t1 MTR_5g021860 25.063 395 216 18 1 327 1 383 8.98e-15 76.3
MS.gene016524.t1 MTR_3g036335 27.299 348 185 19 20 338 38 346 9.67e-15 75.5
MS.gene016524.t1 MTR_4g030110 24.927 341 203 11 1 318 8 318 9.69e-15 75.5
MS.gene016524.t1 MTR_5g021860 25.063 395 216 18 1 327 1 383 1.05e-14 75.9
MS.gene016524.t1 MTR_3g030330 25.538 325 208 12 1 319 1 297 1.05e-14 75.5
MS.gene016524.t1 MTR_2g024100 27.302 315 169 16 38 318 22 310 1.08e-14 75.5
MS.gene016524.t1 MTR_3g009250 34.184 196 107 7 20 208 38 218 1.11e-14 73.6
MS.gene016524.t1 MTR_7g056797 25.291 344 210 12 6 318 4 331 1.17e-14 75.5
MS.gene016524.t1 MTR_7g050480 26.627 338 190 12 6 314 4 312 1.17e-14 75.5
MS.gene016524.t1 MTR_7g061050 26.829 328 199 9 22 327 12 320 1.21e-14 75.1
MS.gene016524.t1 MTR_0649s0020 24.455 413 224 17 23 383 11 387 1.54e-14 75.1
MS.gene016524.t1 MTR_4g027370 25.823 395 213 20 1 327 1 383 1.54e-14 75.5
MS.gene016524.t1 MTR_7g066000 25.882 340 201 14 6 314 9 328 1.78e-14 74.7
MS.gene016524.t1 MTR_4g013175 27.114 343 186 10 22 316 9 335 1.83e-14 75.1
MS.gene016524.t1 MTR_1g055145 54.945 91 28 4 35 121 45 126 2.15e-14 73.6
MS.gene016524.t1 MTR_5g096900 30.292 274 150 12 22 268 11 270 2.28e-14 73.9
MS.gene016524.t1 MTR_1g442850 27.848 316 191 12 20 314 2 301 2.39e-14 74.3
MS.gene016524.t1 MTR_7g050490 32.020 203 101 6 22 208 7 188 2.56e-14 71.2
MS.gene016524.t1 MTR_8g062660 25.076 327 193 11 18 319 17 316 2.60e-14 75.1
MS.gene016524.t1 MTR_3g030310 26.562 320 191 13 19 319 17 311 2.62e-14 74.3
MS.gene016524.t1 MTR_5g057040 30.841 214 97 9 19 209 45 230 2.63e-14 75.1
MS.gene016524.t1 MTR_7g056260 25.545 321 197 12 20 316 11 313 3.38e-14 73.2
MS.gene016524.t1 MTR_7g035295 25.653 421 202 18 20 383 13 379 3.40e-14 73.9
MS.gene016524.t1 MTR_2g425980 24.316 329 211 11 23 326 5 320 3.87e-14 73.9
MS.gene016524.t1 MTR_5g046300 25.962 312 181 13 20 314 1 279 4.29e-14 73.2
MS.gene016524.t1 MTR_5g046290 25.962 312 181 13 20 314 1 279 4.29e-14 73.2
MS.gene016524.t1 MTR_6g079770 23.223 422 249 15 22 388 16 417 5.93e-14 73.2
MS.gene016524.t1 MTR_7g079640 26.613 372 211 17 22 362 12 352 6.13e-14 73.2
MS.gene016524.t1 MTR_1g055375 26.282 312 191 13 26 319 7 297 8.45e-14 72.4
MS.gene016524.t1 MTR_1g007450 25.648 386 228 18 13 363 5 366 1.03e-13 72.8
MS.gene016524.t1 MTR_7g022670 25.538 325 172 9 6 318 9 275 1.28e-13 72.0
MS.gene016524.t1 MTR_7g062100 29.651 344 168 16 23 327 24 332 1.31e-13 72.0
MS.gene016524.t1 MTR_2g437110 25.990 404 243 19 13 383 12 392 1.42e-13 72.4
MS.gene016524.t1 MTR_5g023570 39.655 116 60 3 18 132 32 138 1.44e-13 68.2
MS.gene016524.t1 MTR_3g058470 36.158 177 88 7 20 178 34 203 1.51e-13 71.6
MS.gene016524.t1 MTR_5g056020 25.641 351 210 14 12 321 5 345 1.72e-13 72.0
MS.gene016524.t1 MTR_2g104340 24.337 415 255 14 12 388 3 396 2.13e-13 71.6
MS.gene016524.t1 MTR_5g092850 23.632 402 250 16 22 384 15 398 2.66e-13 71.2
MS.gene016524.t1 MTR_4g019990 24.845 322 203 8 22 316 5 314 3.06e-13 70.9
MS.gene016524.t1 MTR_7g066030 24.010 404 255 17 17 384 16 403 4.29e-13 70.5
MS.gene016524.t1 MTR_2g010920 26.050 357 194 14 23 327 20 358 4.99e-13 70.5
MS.gene016524.t1 MTR_1g115160 24.585 301 201 12 22 319 21 298 5.19e-13 70.1
MS.gene016524.t1 MTR_7g077070 26.166 386 207 19 23 358 16 373 5.30e-13 70.5
MS.gene016524.t1 MTR_3g011120 25.414 362 230 15 13 357 4 342 5.30e-13 70.1
MS.gene016524.t1 MTR_5g022045 25.876 371 218 18 3 332 12 366 6.15e-13 70.5
MS.gene016524.t1 MTR_7g056170 23.318 446 234 17 4 383 56 459 7.40e-13 70.1
MS.gene016524.t1 MTR_6g055210 26.361 349 204 14 6 321 7 335 7.96e-13 70.1
MS.gene016524.t1 MTR_0707s0020 26.389 360 187 15 20 314 23 369 8.63e-13 69.7
MS.gene016524.t1 MTR_6g017270 29.064 203 128 6 20 210 6 204 1.02e-12 68.9
MS.gene016524.t1 MTR_6g086920 26.389 360 187 15 20 314 35 381 1.08e-12 69.7
MS.gene016524.t1 MTR_6g017305 28.676 272 159 12 139 383 18 281 1.18e-12 68.2
MS.gene016524.t1 MTR_3g023940 24.533 375 250 12 20 383 31 383 1.18e-12 69.3
MS.gene016524.t1 MTR_3g080370 25.949 316 176 12 37 314 35 330 1.65e-12 68.9
MS.gene016524.t1 MTR_3g010440 35.606 132 67 4 20 142 23 145 1.94e-12 68.2
MS.gene016524.t1 MTR_1g071010 24.545 330 207 13 12 316 4 316 1.97e-12 68.6
MS.gene016524.t1 MTR_0129s0050 24.292 424 253 16 10 386 4 406 1.98e-12 68.6
MS.gene016524.t1 MTR_3g007300 26.380 326 162 14 20 328 46 310 2.16e-12 68.2
MS.gene016524.t1 MTR_2g046860 27.230 213 136 8 118 323 5 205 2.36e-12 67.8
MS.gene016524.t1 MTR_2g021252 25.902 305 182 10 26 319 50 321 2.52e-12 68.2
MS.gene016524.t1 MTR_4g117550 25.000 404 235 16 13 388 10 373 2.56e-12 68.2
MS.gene016524.t1 MTR_1g009110 24.538 379 229 16 23 369 14 367 2.70e-12 68.2
MS.gene016524.t1 MTR_2g034700 24.324 333 219 12 22 339 13 327 3.02e-12 67.8
MS.gene016524.t1 MTR_3g058440 27.698 278 137 13 20 266 32 276 3.23e-12 67.4
MS.gene016524.t1 MTR_6g048140 25.575 348 204 16 19 340 35 353 3.27e-12 67.8
MS.gene016524.t1 MTR_7g052670 25.604 414 247 20 22 383 20 424 4.47e-12 67.8
MS.gene016524.t1 MTR_4g008790 26.163 344 181 10 22 316 38 357 4.71e-12 67.8
MS.gene016524.t1 MTR_7g077990 24.776 335 188 11 14 314 8 312 5.86e-12 67.0
MS.gene016524.t1 MTR_5g022090 26.331 338 202 16 8 331 12 316 5.93e-12 67.0
MS.gene016524.t1 MTR_4g024870 28.125 224 145 8 26 240 47 263 6.00e-12 67.0
MS.gene016524.t1 MTR_7g016930 24.684 316 201 10 22 320 15 310 6.16e-12 66.6
MS.gene016524.t1 MTR_5g027370 22.356 331 228 11 4 315 10 330 8.56e-12 66.6
MS.gene016524.t1 MTR_5g046260 23.826 298 175 12 20 314 1 249 1.14e-11 65.5
MS.gene016524.t1 MTR_5g027330 22.356 331 228 11 4 315 21 341 1.18e-11 66.2
MS.gene016524.t1 MTR_2g010900 27.586 319 183 16 41 327 1 303 1.77e-11 65.5
MS.gene016524.t1 MTR_6g048120 23.797 395 248 17 21 383 34 407 2.94e-11 65.1
MS.gene016524.t1 MTR_7g056717 25.857 321 187 11 28 323 27 321 3.53e-11 64.7
MS.gene016524.t1 MTR_6g042600 33.898 177 76 7 13 178 24 170 3.66e-11 64.7
MS.gene016524.t1 MTR_7g037670 25.651 269 168 8 6 267 9 252 4.51e-11 63.9
MS.gene016524.t1 MTR_8g012090 22.849 337 190 14 31 339 24 318 4.76e-11 63.9
MS.gene016524.t1 MTR_7g066040 32.680 153 77 7 112 243 19 166 5.26e-11 62.8
MS.gene016524.t1 MTR_6g034830 34.307 137 71 4 1 137 1 118 5.70e-11 60.1
MS.gene016524.t1 MTR_3g010870 25.105 239 142 9 10 235 24 238 9.47e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016524.t1 AT3G06240 28.637 433 228 20 3 383 16 419 4.56e-26 108
MS.gene016524.t1 AT3G23880 29.450 309 186 13 23 319 14 302 1.27e-20 92.8
MS.gene016524.t1 AT4G12560 27.463 335 211 12 20 335 1 322 1.09e-17 84.7
MS.gene016524.t1 AT4G12560 27.463 335 211 12 20 335 1 322 1.09e-17 84.7
MS.gene016524.t1 AT4G12560 27.463 335 211 12 20 335 1 322 1.09e-17 84.7
MS.gene016524.t1 AT1G33530 25.602 332 188 16 3 315 76 367 4.19e-16 80.1
MS.gene016524.t1 AT4G19940 26.168 321 204 12 15 318 27 331 2.87e-15 77.4
MS.gene016524.t1 AT5G49610 25.984 381 202 20 26 376 12 342 1.18e-14 75.1
MS.gene016524.t1 AT4G22390 24.786 351 232 12 26 358 7 343 2.33e-14 74.3
MS.gene016524.t1 AT4G22390 24.786 351 232 12 26 358 7 343 2.36e-14 74.3
MS.gene016524.t1 AT3G10240 27.888 251 153 13 26 268 30 260 8.51e-14 72.8
MS.gene016524.t1 AT3G10430 27.236 246 141 8 23 257 5 223 3.68e-13 70.9
MS.gene016524.t1 AT3G16590 28.146 302 168 17 23 304 5 277 5.37e-13 70.1
MS.gene016524.t1 AT3G16210 23.822 382 236 15 22 390 4 343 5.95e-12 67.0
MS.gene016524.t1 AT2G02030 21.691 272 179 8 22 267 38 301 6.17e-12 66.6
MS.gene016524.t1 AT3G08750 27.200 250 146 11 20 262 9 229 1.81e-11 65.5
MS.gene016524.t1 AT5G62660 25.000 320 173 11 21 313 39 318 2.13e-11 65.5
MS.gene016524.t1 AT5G07610 23.693 287 181 10 3 274 13 276 6.73e-11 63.9
MS.gene016524.t1 AT1G11270 27.632 228 136 9 23 237 35 246 8.54e-11 63.2
MS.gene016524.t1 AT1G11270 27.632 228 136 9 23 237 35 246 8.54e-11 63.2

Find 86 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCCATTGGAAGAGTTTA+TGG 0.136678 8.2:-59736670 MS.gene016524:CDS
CTGAATATTTCTATGGTTTC+GGG 0.156401 8.2:-59737273 MS.gene016524:CDS
ACAAAGAGTGATGATATTAT+TGG 0.247097 8.2:-59736752 MS.gene016524:CDS
TTAGTAAAAGATTTGAAATA+TGG 0.250701 8.2:-59736871 MS.gene016524:CDS
GCTGAATATTTCTATGGTTT+CGG 0.252238 8.2:-59737274 MS.gene016524:CDS
GATTGTGGTTTGTGGGTCTT+TGG 0.287635 8.2:-59736926 MS.gene016524:CDS
TTACACGCTGAATATTTCTA+TGG 0.308857 8.2:-59737280 MS.gene016524:CDS
TAAGCGCACAGAGAAGAAAA+AGG 0.357486 8.2:-59737722 MS.gene016524:CDS
GCGTGTAATTTCGAACCATT+AGG 0.369426 8.2:+59737295 None:intergenic
AAAGTACCTTTGTCCCCTAA+TGG 0.374219 8.2:-59737310 MS.gene016524:CDS
ACACGAATAAATATTATCTA+AGG 0.375192 8.2:+59737192 None:intergenic
ATAGGTAGAGGTTTGAATAA+TGG 0.376961 8.2:+59737359 None:intergenic
ATTATAGAGACACCCTGCTT+TGG 0.378072 8.2:+59737084 None:intergenic
CTCCCATTGGAAGAGTTTAT+GGG 0.379547 8.2:-59736669 MS.gene016524:CDS
AGATAATATTTATTCGTGTT+TGG 0.381590 8.2:-59737188 MS.gene016524:CDS
CTCCCTGGTGCAAGCTTAAG+AGG 0.385370 8.2:-59736602 MS.gene016524:CDS
TATTAATTCATGAGACAGAT+AGG 0.394740 8.2:+59737690 None:intergenic
TTATAGAGACACCCTGCTTT+GGG 0.396753 8.2:+59737085 None:intergenic
CGAGTTGGAATACGATCAAT+AGG 0.407482 8.2:+59736797 None:intergenic
AAATGTGAGTTTGCGAAGTA+AGG 0.411816 8.2:+59737583 None:intergenic
TCAAATACGTTTGTCAGTCT+TGG 0.415643 8.2:-59737624 MS.gene016524:CDS
TAATGGTGTTATTCATTGGT+TGG 0.421691 8.2:-59737065 MS.gene016524:CDS
TCTATAATGGTGTTATTCAT+TGG 0.426387 8.2:-59737069 MS.gene016524:CDS
TGATGGTGATTGTGGTTTGT+GGG 0.429161 8.2:-59736933 MS.gene016524:CDS
TCATCATGTTCAAAATCATC+TGG 0.429838 8.2:+59736953 None:intergenic
AACAAATGGTGGTATTGAAT+TGG 0.431919 8.2:-59736729 MS.gene016524:CDS
GAGTCTCTGCTTTCACTCCC+TGG 0.434682 8.2:-59736617 MS.gene016524:CDS
CCGGTTAACAGATGATTACT+TGG 0.440721 8.2:-59737245 MS.gene016524:CDS
AAAGCAGGGTGTCTCTATAA+TGG 0.440938 8.2:-59737082 MS.gene016524:CDS
CGTGTAATTTCGAACCATTA+GGG 0.442704 8.2:+59737296 None:intergenic
CACTCTTTGTACAACACAAT+GGG 0.454210 8.2:+59736765 None:intergenic
AATACAAAGTGAACTCCTCT+TGG 0.454814 8.2:-59736838 MS.gene016524:CDS
ATGATGGTGATTGTGGTTTG+TGG 0.457387 8.2:-59736934 MS.gene016524:CDS
TCATCGAAGGTACTCGTATG+AGG 0.465854 8.2:+59737112 None:intergenic
TTCGATGATAAGCCCAAAGC+AGG 0.466923 8.2:-59737097 MS.gene016524:CDS
TAGTAAAAGATTTGAAATAT+GGG 0.469092 8.2:-59736870 MS.gene016524:CDS
ATTATTCAAACCTCTACCTA+TGG 0.478046 8.2:-59737357 MS.gene016524:CDS
CCAAGTAATCATCTGTTAAC+CGG 0.489111 8.2:+59737245 None:intergenic
CGAATAAATATTATCTAAGG+TGG 0.500592 8.2:+59737195 None:intergenic
GATGATATTATTGGAACAAA+TGG 0.502670 8.2:-59736743 MS.gene016524:CDS
TCAAATCCTAGAGAGGTTAC+CGG 0.506318 8.2:-59737665 MS.gene016524:CDS
TGTTAGAGCATTCCTCCCAT+TGG 0.510718 8.2:-59736682 MS.gene016524:CDS
GAAATTAAAGGTTCATGTAG+AGG 0.513904 8.2:-59737397 MS.gene016524:CDS
ACCCCATAAACTCTTCCAAT+GGG 0.514974 8.2:+59736667 None:intergenic
GAACATGATGATGGTGATTG+TGG 0.520857 8.2:-59736941 MS.gene016524:CDS
TGGTGAAGTATGATGAGAAT+GGG 0.523627 8.2:-59736709 MS.gene016524:CDS
TTTCTGTGAAATCCGGTGGA+TGG 0.525091 8.2:+59737331 None:intergenic
CATCCTCTTAAGCTTGCACC+AGG 0.525543 8.2:+59736599 None:intergenic
TCTATGGTTTCGGGTATGAC+CGG 0.531007 8.2:-59737264 MS.gene016524:CDS
ACTTCACCGGTAACCTCTCT+AGG 0.537758 8.2:+59737659 None:intergenic
TAACGAAAGGAAACTGTTGG+AGG 0.538225 8.2:-59736987 MS.gene016524:CDS
CTCTGTATACATAGCCACTT+GGG 0.546267 8.2:+59736637 None:intergenic
TGCTTTGGGCTTATCATCGA+AGG 0.553318 8.2:+59737099 None:intergenic
TGGATGGATTCCATAGGTAG+AGG 0.558858 8.2:+59737347 None:intergenic
GTTAACAGATGATTACTTGG+TGG 0.563052 8.2:-59737242 MS.gene016524:CDS
AACCCCATAAACTCTTCCAA+TGG 0.567001 8.2:+59736666 None:intergenic
AATGGGTAAAAGTAACGAGT+TGG 0.569566 8.2:+59736782 None:intergenic
AACAAGAGTCTTTGTCCAAG+AGG 0.573198 8.2:+59736823 None:intergenic
ATCGAGAGATAATGTGTGGA+AGG 0.575447 8.2:-59737155 MS.gene016524:CDS
ACAATAACATTATCACGCCA+TGG 0.591458 8.2:+59737022 None:intergenic
TACCTATGGAATCCATCCAC+CGG 0.591686 8.2:-59737343 MS.gene016524:CDS
TCCCATTGGAAGAGTTTATG+GGG 0.592813 8.2:-59736668 MS.gene016524:CDS
TGTTCAAAATCATCTGGAGG+AGG 0.595337 8.2:+59736959 None:intergenic
CATCGAAGGTACTCGTATGA+GGG 0.596952 8.2:+59737113 None:intergenic
ATTAATTCATGAGACAGATA+GGG 0.597161 8.2:+59737691 None:intergenic
TTGGTGAAGTATGATGAGAA+TGG 0.601197 8.2:-59736710 MS.gene016524:CDS
TGCGCTTACTTCCTCTACGA+CGG 0.602091 8.2:+59737737 None:intergenic
GATATTATTGGAACAAATGG+TGG 0.604010 8.2:-59736740 MS.gene016524:CDS
AAGAGAAGCAACCGTCGTAG+AGG 0.605369 8.2:-59737748 MS.gene016524:CDS
TTCGAACCATTAGGGGACAA+AGG 0.606571 8.2:+59737304 None:intergenic
TCACTCTTTGTACAACACAA+TGG 0.607997 8.2:+59736764 None:intergenic
GAATAAATATTATCTAAGGT+GGG 0.612868 8.2:+59737196 None:intergenic
ACTCTGTATACATAGCCACT+TGG 0.613352 8.2:+59736636 None:intergenic
TAAGGTGGGATCATAGCCAT+AGG 0.614896 8.2:+59737210 None:intergenic
TAATAGTTCAAATCCTAGAG+AGG 0.618805 8.2:-59737672 MS.gene016524:CDS
AAACGTATAAGAGACTTCAC+CGG 0.625176 8.2:+59737646 None:intergenic
GTGTAATTTCGAACCATTAG+GGG 0.636287 8.2:+59737297 None:intergenic
TCTCATCGAGAGATAATGTG+TGG 0.643316 8.2:-59737159 MS.gene016524:CDS
CCATAAACTCTTCCAATGGG+AGG 0.649113 8.2:+59736670 None:intergenic
TCTACGAGTGTGTGTTGCGG+TGG 0.659999 8.2:+59737552 None:intergenic
ATCCGGTGGATGGATTCCAT+AGG 0.664775 8.2:+59737341 None:intergenic
TCATGTTCAAAATCATCTGG+AGG 0.668783 8.2:+59736956 None:intergenic
TCGATGATAAGCCCAAAGCA+GGG 0.688005 8.2:-59737096 MS.gene016524:CDS
ATGGGGTTATAGATCCCAAG+TGG 0.695201 8.2:-59736651 MS.gene016524:CDS
AATTCTACGAGTGTGTGTTG+CGG 0.731538 8.2:+59737549 None:intergenic
ATCCTCTTAAGCTTGCACCA+GGG 0.736483 8.2:+59736600 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGTAAAAGATTTGAAATAT+GGG - chr8.2:59737479-59737498 MS.gene016524:CDS 15.0%
!!! TTAGTAAAAGATTTGAAATA+TGG - chr8.2:59737478-59737497 MS.gene016524:CDS 15.0%
!! ACACGAATAAATATTATCTA+AGG + chr8.2:59737160-59737179 None:intergenic 20.0%
!! AGATAATATTTATTCGTGTT+TGG - chr8.2:59737161-59737180 MS.gene016524:CDS 20.0%
!!! CGTTCTTATTTTGAAATTAA+AGG - chr8.2:59736940-59736959 MS.gene016524:CDS 20.0%
!!! GAATAAATATTATCTAAGGT+GGG + chr8.2:59737156-59737175 None:intergenic 20.0%
! ACAAAGAGTGATGATATTAT+TGG - chr8.2:59737597-59737616 MS.gene016524:CDS 25.0%
! ATTAATTCATGAGACAGATA+GGG + chr8.2:59736661-59736680 None:intergenic 25.0%
! CGAATAAATATTATCTAAGG+TGG + chr8.2:59737157-59737176 None:intergenic 25.0%
! GATGATATTATTGGAACAAA+TGG - chr8.2:59737606-59737625 MS.gene016524:CDS 25.0%
! TATTAATTCATGAGACAGAT+AGG + chr8.2:59736662-59736681 None:intergenic 25.0%
!!! TCTATAATGGTGTTATTCAT+TGG - chr8.2:59737280-59737299 MS.gene016524:CDS 25.0%
!!! TTGCATTTGATTTTAACGAA+AGG - chr8.2:59737349-59737368 MS.gene016524:CDS 25.0%
ATAGGTAGAGGTTTGAATAA+TGG + chr8.2:59736993-59737012 None:intergenic 30.0%
ATTATTCAAACCTCTACCTA+TGG - chr8.2:59736992-59737011 MS.gene016524:CDS 30.0%
GAAATTAAAGGTTCATGTAG+AGG - chr8.2:59736952-59736971 MS.gene016524:CDS 30.0%
GATATTATTGGAACAAATGG+TGG - chr8.2:59737609-59737628 MS.gene016524:CDS 30.0%
TAATAGTTCAAATCCTAGAG+AGG - chr8.2:59736677-59736696 MS.gene016524:CDS 30.0%
TCATCATGTTCAAAATCATC+TGG + chr8.2:59737399-59737418 None:intergenic 30.0%
! AACAAATGGTGGTATTGAAT+TGG - chr8.2:59737620-59737639 MS.gene016524:CDS 30.0%
! CTGAATATTTCTATGGTTTC+GGG - chr8.2:59737076-59737095 MS.gene016524:CDS 30.0%
! GATGATTTTGAACATGATGA+TGG - chr8.2:59737399-59737418 MS.gene016524:CDS 30.0%
! GCTGAATATTTCTATGGTTT+CGG - chr8.2:59737075-59737094 MS.gene016524:CDS 30.0%
! TTACACGCTGAATATTTCTA+TGG - chr8.2:59737069-59737088 MS.gene016524:CDS 30.0%
! TTTTAACGAAAGGAAACTGT+TGG - chr8.2:59737359-59737378 MS.gene016524:CDS 30.0%
!! ATTTTTCAGTCTATGGTCTA+CGG - chr8.2:59737449-59737468 MS.gene016524:CDS 30.0%
!! TAATGGTGTTATTCATTGGT+TGG - chr8.2:59737284-59737303 MS.gene016524:CDS 30.0%
!! TTGGTGAATTTTTCAGTCTA+TGG - chr8.2:59737442-59737461 MS.gene016524:CDS 30.0%
!!! CAATGTTGATTTTCTACTTC+TGG - chr8.2:59736912-59736931 MS.gene016524:CDS 30.0%
!!! TTCATCGTGATTTTTTTCCA+TGG - chr8.2:59737310-59737329 MS.gene016524:CDS 30.0%
AAACGTATAAGAGACTTCAC+CGG + chr8.2:59736706-59736725 None:intergenic 35.0%
AAATGTGAGTTTGCGAAGTA+AGG + chr8.2:59736769-59736788 None:intergenic 35.0%
AATACAAAGTGAACTCCTCT+TGG - chr8.2:59737511-59737530 MS.gene016524:CDS 35.0%
AATGGGTAAAAGTAACGAGT+TGG + chr8.2:59737570-59737589 None:intergenic 35.0%
ACAATAACATTATCACGCCA+TGG + chr8.2:59737330-59737349 None:intergenic 35.0%
CACTCTTTGTACAACACAAT+GGG + chr8.2:59737587-59737606 None:intergenic 35.0%
CCAAGTAATCATCTGTTAAC+CGG + chr8.2:59737107-59737126 None:intergenic 35.0%
CGTGTAATTTCGAACCATTA+GGG + chr8.2:59737056-59737075 None:intergenic 35.0%
GTGTAATTTCGAACCATTAG+GGG + chr8.2:59737055-59737074 None:intergenic 35.0%
GTTAACAGATGATTACTTGG+TGG - chr8.2:59737107-59737126 MS.gene016524:CDS 35.0%
TCAAATACGTTTGTCAGTCT+TGG - chr8.2:59736725-59736744 MS.gene016524:CDS 35.0%
TCACTCTTTGTACAACACAA+TGG + chr8.2:59737588-59737607 None:intergenic 35.0%
TCATGTTCAAAATCATCTGG+AGG + chr8.2:59737396-59737415 None:intergenic 35.0%
TGGTGAAGTATGATGAGAAT+GGG - chr8.2:59737640-59737659 MS.gene016524:CDS 35.0%
TTGGTGAAGTATGATGAGAA+TGG - chr8.2:59737639-59737658 MS.gene016524:CDS 35.0%
! AGGTACTTTTCTGTGAAATC+CGG + chr8.2:59737028-59737047 None:intergenic 35.0%
!!! TTGGTGGTTTTAATGTCCTA+TGG - chr8.2:59737123-59737142 MS.gene016524:CDS 35.0%
AACAAGAGTCTTTGTCCAAG+AGG + chr8.2:59737529-59737548 None:intergenic 40.0%
AACCCCATAAACTCTTCCAA+TGG + chr8.2:59737686-59737705 None:intergenic 40.0%
AATTCTACGAGTGTGTGTTG+CGG + chr8.2:59736803-59736822 None:intergenic 40.0%
ACCCCATAAACTCTTCCAAT+GGG + chr8.2:59737685-59737704 None:intergenic 40.0%
ACTCTGTATACATAGCCACT+TGG + chr8.2:59737716-59737735 None:intergenic 40.0%
ATCGAGAGATAATGTGTGGA+AGG - chr8.2:59737194-59737213 MS.gene016524:CDS 40.0%
ATTATAGAGACACCCTGCTT+TGG + chr8.2:59737268-59737287 None:intergenic 40.0%
CCGGTTAACAGATGATTACT+TGG - chr8.2:59737104-59737123 MS.gene016524:CDS 40.0%
CTCCCATTGGAAGAGTTTAT+GGG - chr8.2:59737680-59737699 MS.gene016524:CDS 40.0%
CTCTGTATACATAGCCACTT+GGG + chr8.2:59737715-59737734 None:intergenic 40.0%
GCGTGTAATTTCGAACCATT+AGG + chr8.2:59737057-59737076 None:intergenic 40.0%
TAACGAAAGGAAACTGTTGG+AGG - chr8.2:59737362-59737381 MS.gene016524:CDS 40.0%
TAAGCGCACAGAGAAGAAAA+AGG - chr8.2:59736627-59736646 MS.gene016524:CDS 40.0%
TCAAATCCTAGAGAGGTTAC+CGG - chr8.2:59736684-59736703 MS.gene016524:CDS 40.0%
TCCCATTGGAAGAGTTTATG+GGG - chr8.2:59737681-59737700 MS.gene016524:CDS 40.0%
TCTCATCGAGAGATAATGTG+TGG - chr8.2:59737190-59737209 MS.gene016524:CDS 40.0%
TGTTCAAAATCATCTGGAGG+AGG + chr8.2:59737393-59737412 None:intergenic 40.0%
TTATAGAGACACCCTGCTTT+GGG + chr8.2:59737267-59737286 None:intergenic 40.0%
! AAAGCAGGGTGTCTCTATAA+TGG - chr8.2:59737267-59737286 MS.gene016524:CDS 40.0%
! AAAGTACCTTTGTCCCCTAA+TGG - chr8.2:59737039-59737058 MS.gene016524:CDS 40.0%
! ATGATGGTGATTGTGGTTTG+TGG - chr8.2:59737415-59737434 MS.gene016524:CDS 40.0%
! CGAGTTGGAATACGATCAAT+AGG + chr8.2:59737555-59737574 None:intergenic 40.0%
! TACTTTTCTGTGAAATCCGG+TGG + chr8.2:59737025-59737044 None:intergenic 40.0%
! TGATGGTGATTGTGGTTTGT+GGG - chr8.2:59737416-59737435 MS.gene016524:CDS 40.0%
!! GAACATGATGATGGTGATTG+TGG - chr8.2:59737408-59737427 MS.gene016524:CDS 40.0%
ATCCTCTTAAGCTTGCACCA+GGG + chr8.2:59737752-59737771 None:intergenic 45.0%
ATGGGGTTATAGATCCCAAG+TGG - chr8.2:59737698-59737717 MS.gene016524:CDS 45.0%
CCATAAACTCTTCCAATGGG+AGG + chr8.2:59737682-59737701 None:intergenic 45.0%
CCTCCCATTGGAAGAGTTTA+TGG - chr8.2:59737679-59737698 MS.gene016524:CDS 45.0%
TAAGGTGGGATCATAGCCAT+AGG + chr8.2:59737142-59737161 None:intergenic 45.0%
TACCTATGGAATCCATCCAC+CGG - chr8.2:59737006-59737025 MS.gene016524:CDS 45.0%
TCGATGATAAGCCCAAAGCA+GGG - chr8.2:59737253-59737272 MS.gene016524:CDS 45.0%
TTCGAACCATTAGGGGACAA+AGG + chr8.2:59737048-59737067 None:intergenic 45.0%
TTCGATGATAAGCCCAAAGC+AGG - chr8.2:59737252-59737271 MS.gene016524:CDS 45.0%
TTTCTGTGAAATCCGGTGGA+TGG + chr8.2:59737021-59737040 None:intergenic 45.0%
! GATTGTGGTTTGTGGGTCTT+TGG - chr8.2:59737423-59737442 MS.gene016524:CDS 45.0%
! TCTATGGTTTCGGGTATGAC+CGG - chr8.2:59737085-59737104 MS.gene016524:CDS 45.0%
! TGCTTTGGGCTTATCATCGA+AGG + chr8.2:59737253-59737272 None:intergenic 45.0%
! TGGATGGATTCCATAGGTAG+AGG + chr8.2:59737005-59737024 None:intergenic 45.0%
! TGTTAGAGCATTCCTCCCAT+TGG - chr8.2:59737667-59737686 MS.gene016524:CDS 45.0%
!! CATCGAAGGTACTCGTATGA+GGG + chr8.2:59737239-59737258 None:intergenic 45.0%
!! TCATCGAAGGTACTCGTATG+AGG + chr8.2:59737240-59737259 None:intergenic 45.0%
AAGAGAAGCAACCGTCGTAG+AGG - chr8.2:59736601-59736620 MS.gene016524:CDS 50.0%
ACTTCACCGGTAACCTCTCT+AGG + chr8.2:59736693-59736712 None:intergenic 50.0%
CATCCTCTTAAGCTTGCACC+AGG + chr8.2:59737753-59737772 None:intergenic 50.0%
TGCGCTTACTTCCTCTACGA+CGG + chr8.2:59736615-59736634 None:intergenic 50.0%
! ATCCGGTGGATGGATTCCAT+AGG + chr8.2:59737011-59737030 None:intergenic 50.0%
CTCCCTGGTGCAAGCTTAAG+AGG - chr8.2:59737747-59737766 MS.gene016524:CDS 55.0%
GAGTCTCTGCTTTCACTCCC+TGG - chr8.2:59737732-59737751 MS.gene016524:CDS 55.0%
TCTACGAGTGTGTGTTGCGG+TGG + chr8.2:59736800-59736819 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 59736598 59737773 59736598 ID=MS.gene016524
chr8.2 mRNA 59736598 59737773 59736598 ID=MS.gene016524.t1;Parent=MS.gene016524
chr8.2 exon 59736598 59737773 59736598 ID=MS.gene016524.t1.exon1;Parent=MS.gene016524.t1
chr8.2 CDS 59736598 59737773 59736598 ID=cds.MS.gene016524.t1;Parent=MS.gene016524.t1
Gene Sequence

>MS.gene016524

ATGAAGAGAAGCAACCGTCGTAGAGGAAGTAAGCGCACAGAGAAGAAAAAGGACACGCTACCCTATCTGTCTCATGAATTAATAGTTCAAATCCTAGAGAGGTTACCGGTGAAGTCTCTTATACGTTTCAAATACGTTTGTCAGTCTTGGTTTTCTCTTATCTCTGATCCTTACTTCGCAAACTCACATTTTCAAATTACCACCGCAACACACACTCGTAGAATTTTGTGCATAAGATCATTTTCAGATTGTCAAACTCGATCTATAGATTTAACAGCAGAATCGCTTGATGATGATTTTGCTTGTGATTCACTCAATGTTGATTTTCTACTTCTGGAATATCGTTCTTATTTTGAAATTAAAGGTTCATGTAGAGGCTTTGTACTTTTGCACCATTATTCAAACCTCTACCTATGGAATCCATCCACCGGATTTCACAGAAAAGTACCTTTGTCCCCTAATGGTTCGAAATTACACGCTGAATATTTCTATGGTTTCGGGTATGACCGGTTAACAGATGATTACTTGGTGGTTTTAATGTCCTATGGCTATGATCCCACCTTAGATAATATTTATTCGTGTTTGGAGTTTTTCTCATCGAGAGATAATGTGTGGAAGGAAATTGAGTGCTCTCATTGCCCTCATACGAGTACCTTCGATGATAAGCCCAAAGCAGGGTGTCTCTATAATGGTGTTATTCATTGGTTGGCTTTTCATCGTGATTTTTTTCCATGGCGTGATAATGTTATTGTTGCATTTGATTTTAACGAAAGGAAACTGTTGGAGGAGATGCCTCCTCCAGATGATTTTGAACATGATGATGGTGATTGTGGTTTGTGGGTCTTTGGTGAATTTTTCAGTCTATGGTCTACGGATTACGTTAGTAAAAGATTTGAAATATGGGTGATGAAAGAATACAAAGTGAACTCCTCTTGGACAAAGACTCTTGTTTTTCCTATTGATCGTATTCCAACTCGTTACTTTTACCCATTGTGTTGTACAAAGAGTGATGATATTATTGGAACAAATGGTGGTATTGAATTGGTGAAGTATGATGAGAATGGGCAGTTGTTAGAGCATTCCTCCCATTGGAAGAGTTTATGGGGTTATAGATCCCAAGTGGCTATGTATACAGAGTCTCTGCTTTCACTCCCTGGTGCAAGCTTAAGAGGATGA

Protein sequence

>MS.gene016524.t1

MKRSNRRRGSKRTEKKKDTLPYLSHELIVQILERLPVKSLIRFKYVCQSWFSLISDPYFANSHFQITTATHTRRILCIRSFSDCQTRSIDLTAESLDDDFACDSLNVDFLLLEYRSYFEIKGSCRGFVLLHHYSNLYLWNPSTGFHRKVPLSPNGSKLHAEYFYGFGYDRLTDDYLVVLMSYGYDPTLDNIYSCLEFFSSRDNVWKEIECSHCPHTSTFDDKPKAGCLYNGVIHWLAFHRDFFPWRDNVIVAFDFNERKLLEEMPPPDDFEHDDGDCGLWVFGEFFSLWSTDYVSKRFEIWVMKEYKVNSSWTKTLVFPIDRIPTRYFYPLCCTKSDDIIGTNGGIELVKYDENGQLLEHSSHWKSLWGYRSQVAMYTESLLSLPGASLRG