AlfalfaGEDB | MS.gene063472

M. sativa cultivar XinJiangDaYe / MS.gene063472

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063472.t1	XP_013457955.1	68.9	183	52	3	2	182	180	359	2.80E-66	261.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063472.t1	A0A072URK6	68.9	183	52	3	2	182	180	359	2.0e-66	261.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene041491	MS.gene063472	PPI
MS.gene063472	MS.gene42445	PPI
MS.gene033443	MS.gene063472	PPI
MS.gene51207	MS.gene063472	PPI
MS.gene063472	MS.gene26830	PPI
MS.gene063472	MS.gene22715	PPI
MS.gene059096	MS.gene063472	PPI
MS.gene57528	MS.gene063472	PPI
MS.gene50297	MS.gene063472	PPI
MS.gene063472	MS.gene51207	PPI
MS.gene006711	MS.gene063472	PPI
MS.gene27285	MS.gene063472	PPI
MS.gene063472	MS.gene36595	PPI
MS.gene58716	MS.gene063472	PPI
MS.gene68580	MS.gene063472	PPI
MS.gene064091	MS.gene063472	PPI
MS.gene019505	MS.gene063472	PPI
MS.gene064112	MS.gene063472	PPI
MS.gene045476	MS.gene063472	PPI
MS.gene58785	MS.gene063472	PPI
MS.gene24208	MS.gene063472	PPI
MS.gene50307	MS.gene063472	PPI
MS.gene063472	MS.gene061240	PPI
MS.gene034690	MS.gene063472	PPI
MS.gene044429	MS.gene063472	PPI
MS.gene51189	MS.gene063472	PPI
MS.gene063472	MS.gene041473	PPI
MS.gene85454	MS.gene063472	PPI
MS.gene96407	MS.gene063472	PPI
MS.gene063472	MS.gene50311	PPI
MS.gene77857	MS.gene063472	PPI
MS.gene063472	MS.gene035234	PPI
MS.gene063472	MS.gene058989	PPI
MS.gene57527	MS.gene063472	PPI
MS.gene51191	MS.gene063472	PPI
MS.gene063472	MS.gene041468	PPI
MS.gene063472	MS.gene041395	PPI
MS.gene033426	MS.gene063472	PPI
MS.gene063472	MS.gene42447	PPI
MS.gene064086	MS.gene063472	PPI
MS.gene033430	MS.gene063472	PPI
MS.gene063472	MS.gene51189	PPI
MS.gene50298	MS.gene063472	PPI
MS.gene67687	MS.gene063472	PPI
MS.gene063472	MS.gene044425	PPI
MS.gene71159	MS.gene063472	PPI
MS.gene96448	MS.gene063472	PPI
MS.gene063472	MS.gene40988	PPI
MS.gene77858	MS.gene063472	PPI
MS.gene058692	MS.gene063472	PPI
MS.gene041392	MS.gene063472	PPI
MS.gene063472	MS.gene59637	PPI
MS.gene063472	MS.gene24173	PPI
MS.gene033083	MS.gene063472	PPI
MS.gene69309	MS.gene063472	PPI
MS.gene63658	MS.gene063472	PPI
MS.gene024002	MS.gene063472	PPI
MS.gene033081	MS.gene063472	PPI
MS.gene063472	MS.gene27022	PPI
MS.gene063472	MS.gene87585	PPI
MS.gene035262	MS.gene063472	PPI
MS.gene034686	MS.gene063472	PPI
MS.gene063472	MS.gene023999	PPI
MS.gene063472	MS.gene036599	PPI
MS.gene40982	MS.gene063472	PPI
MS.gene070461	MS.gene063472	PPI
MS.gene51199	MS.gene063472	PPI
MS.gene064108	MS.gene063472	PPI
MS.gene58315	MS.gene063472	PPI
MS.gene063472	MS.gene036581	PPI
MS.gene063472	MS.gene035237	PPI
MS.gene87559	MS.gene063472	PPI
MS.gene063472	MS.gene000036	PPI
MS.gene033431	MS.gene063472	PPI
MS.gene24212	MS.gene063472	PPI
MS.gene063472	MS.gene50320	PPI
MS.gene063472	MS.gene87557	PPI
MS.gene041475	MS.gene063472	PPI
MS.gene063472	MS.gene035263	PPI
MS.gene063472	MS.gene036664	PPI
MS.gene063472	MS.gene053257	PPI
MS.gene64203	MS.gene063472	PPI
MS.gene063472	MS.gene51201	PPI
MS.gene063472	MS.gene009893	PPI
MS.gene060367	MS.gene063472	PPI
MS.gene063472	MS.gene50336	PPI
MS.gene51202	MS.gene063472	PPI
MS.gene059101	MS.gene063472	PPI
MS.gene063472	MS.gene77704	PPI
MS.gene036664	MS.gene063472	PPI
MS.gene064111	MS.gene063472	PPI
MS.gene063472	MS.gene50305	PPI
MS.gene26829	MS.gene063472	PPI
MS.gene064104	MS.gene063472	PPI
MS.gene40878	MS.gene063472	PPI
MS.gene053256	MS.gene063472	PPI
MS.gene063472	MS.gene68890	PPI
MS.gene75875	MS.gene063472	PPI
MS.gene063472	MS.gene86273	PPI
MS.gene063472	MS.gene036663	PPI
MS.gene54049	MS.gene063472	PPI
MS.gene50337	MS.gene063472	PPI
MS.gene43789	MS.gene063472	PPI
MS.gene063472	MS.gene57525	PPI
MS.gene063472	MS.gene63657	PPI
MS.gene006710	MS.gene063472	PPI
MS.gene50332	MS.gene063472	PPI
MS.gene063472	MS.gene023996	PPI
MS.gene072177	MS.gene063472	PPI
MS.gene58722	MS.gene063472	PPI
MS.gene063472	MS.gene030114	PPI
MS.gene063472	MS.gene045473	PPI
MS.gene063472	MS.gene50301	PPI
MS.gene033079	MS.gene063472	PPI
MS.gene061241	MS.gene063472	PPI
MS.gene24213	MS.gene063472	PPI
MS.gene43796	MS.gene063472	PPI
MS.gene063472	MS.gene031590	PPI
MS.gene58312	MS.gene063472	PPI
MS.gene36704	MS.gene063472	PPI
MS.gene063472	MS.gene064086	PPI
MS.gene24826	MS.gene063472	PPI
MS.gene036556	MS.gene063472	PPI
MS.gene58313	MS.gene063472	PPI
MS.gene063472	MS.gene90742	PPI
MS.gene066622	MS.gene063472	PPI
MS.gene063472	MS.gene50332	PPI
MS.gene44887	MS.gene063472	PPI
MS.gene85043	MS.gene063472	PPI
MS.gene063472	MS.gene024979	PPI
MS.gene39265	MS.gene063472	PPI
MS.gene51188	MS.gene063472	PPI
MS.gene63655	MS.gene063472	PPI
MS.gene44883	MS.gene063472	PPI
MS.gene036583	MS.gene063472	PPI
MS.gene88780	MS.gene063472	PPI
MS.gene063472	MS.gene24826	PPI
MS.gene41046	MS.gene063472	PPI
MS.gene87588	MS.gene063472	PPI
MS.gene055694	MS.gene063472	PPI
MS.gene017412	MS.gene063472	PPI
MS.gene063472	MS.gene43790	PPI
MS.gene063472	MS.gene034680	PPI
MS.gene51192	MS.gene063472	PPI
MS.gene009883	MS.gene063472	PPI
MS.gene58317	MS.gene063472	PPI
MS.gene044563	MS.gene063472	PPI
MS.gene069075	MS.gene063472	PPI
MS.gene033427	MS.gene063472	PPI
MS.gene063472	MS.gene88416	PPI
MS.gene40985	MS.gene063472	PPI
MS.gene031591	MS.gene063472	PPI
MS.gene041474	MS.gene063472	PPI
MS.gene063472	MS.gene003076	PPI
MS.gene063472	MS.gene024009	PPI
MS.gene063472	MS.gene009892	PPI
MS.gene58321	MS.gene063472	PPI
MS.gene041388	MS.gene063472	PPI
MS.gene062698	MS.gene063472	PPI
MS.gene57536	MS.gene063472	PPI
MS.gene063472	MS.gene006705	PPI
MS.gene96126	MS.gene063472	PPI
MS.gene019503	MS.gene063472	PPI
MS.gene51208	MS.gene063472	PPI
MS.gene063472	MS.gene061241	PPI
MS.gene016524	MS.gene063472	PPI
MS.gene50304	MS.gene063472	PPI
MS.gene041473	MS.gene063472	PPI
MS.gene59943	MS.gene063472	PPI
MS.gene063472	MS.gene38220	PPI
MS.gene063472	MS.gene40986	PPI
MS.gene51204	MS.gene063472	PPI
MS.gene58783	MS.gene063472	PPI
MS.gene063472	MS.gene041394	PPI
MS.gene31587	MS.gene063472	PPI
MS.gene036557	MS.gene063472	PPI
MS.gene041393	MS.gene063472	PPI
MS.gene033441	MS.gene063472	PPI
MS.gene063472	MS.gene03060	PPI
MS.gene063472	MS.gene024011	PPI
MS.gene063472	MS.gene58241	PPI
MS.gene063472	MS.gene064109	PPI
MS.gene063826	MS.gene063472	PPI
MS.gene063472	MS.gene058696	PPI
MS.gene063472	MS.gene035238	PPI
MS.gene84698	MS.gene063472	PPI
MS.gene063472	MS.gene064114	PPI
MS.gene44892	MS.gene063472	PPI
MS.gene009891	MS.gene063472	PPI
MS.gene58239	MS.gene063472	PPI
MS.gene066641	MS.gene063472	PPI
MS.gene82082	MS.gene063472	PPI
MS.gene000038	MS.gene063472	PPI
MS.gene063472	MS.gene80610	PPI
MS.gene57531	MS.gene063472	PPI
MS.gene67501	MS.gene063472	PPI
MS.gene90742	MS.gene063472	PPI
MS.gene39262	MS.gene063472	PPI
MS.gene58241	MS.gene063472	PPI
MS.gene57535	MS.gene063472	PPI
MS.gene025887	MS.gene063472	PPI
MS.gene019507	MS.gene063472	PPI
MS.gene045474	MS.gene063472	PPI
MS.gene041470	MS.gene063472	PPI
MS.gene058694	MS.gene063472	PPI
MS.gene064090	MS.gene063472	PPI
MS.gene058701	MS.gene063472	PPI
MS.gene063472	MS.gene041391	PPI
MS.gene015089	MS.gene063472	PPI
MS.gene90743	MS.gene063472	PPI
MS.gene44885	MS.gene063472	PPI
MS.gene011679	MS.gene063472	PPI
MS.gene060370	MS.gene063472	PPI
MS.gene063472	MS.gene045474	PPI
MS.gene64001	MS.gene063472	PPI
MS.gene063472	MS.gene036558	PPI
MS.gene57533	MS.gene063472	PPI
MS.gene063472	MS.gene87554	PPI
MS.gene063472	MS.gene40984	PPI
MS.gene032970	MS.gene063472	PPI
MS.gene063472	MS.gene064108	PPI
MS.gene063472	MS.gene048193	PPI
MS.gene77856	MS.gene063472	PPI
MS.gene063472	MS.gene016220	PPI
MS.gene063472	MS.gene024008	PPI
MS.gene68890	MS.gene063472	PPI
MS.gene40887	MS.gene063472	PPI
MS.gene50339	MS.gene063472	PPI
MS.gene046958	MS.gene063472	PPI
MS.gene034688	MS.gene063472	PPI
MS.gene060366	MS.gene063472	PPI
MS.gene063472	MS.gene58240	PPI
MS.gene48221	MS.gene063472	PPI
MS.gene063472	MS.gene27284	PPI
MS.gene57529	MS.gene063472	PPI
MS.gene063472	MS.gene48221	PPI
MS.gene80884	MS.gene063472	PPI
MS.gene041395	MS.gene063472	PPI
MS.gene40886	MS.gene063472	PPI
MS.gene40902	MS.gene063472	PPI
MS.gene063472	MS.gene063474	PPI
MS.gene063472	MS.gene51190	PPI
MS.gene063472	MS.gene58319	PPI
MS.gene063472	MS.gene044426	PPI
MS.gene063472	MS.gene034681	PPI
MS.gene27051	MS.gene063472	PPI
MS.gene060368	MS.gene063472	PPI
MS.gene033875	MS.gene063472	PPI
MS.gene063472	MS.gene57532	PPI
MS.gene77704	MS.gene063472	PPI
MS.gene27020	MS.gene063472	PPI
MS.gene066620	MS.gene063472	PPI
MS.gene063472	MS.gene033442	PPI
MS.gene035236	MS.gene063472	PPI
MS.gene86273	MS.gene063472	PPI
MS.gene041394	MS.gene063472	PPI
MS.gene059157	MS.gene063472	PPI
MS.gene063472	MS.gene44428	PPI
MS.gene028390	MS.gene063472	PPI
MS.gene063472	MS.gene058669	PPI
MS.gene011106	MS.gene063472	PPI
MS.gene063472	MS.gene066120	PPI
MS.gene62398	MS.gene063472	PPI
MS.gene60027	MS.gene063472	PPI
MS.gene045475	MS.gene063472	PPI
MS.gene038756	MS.gene063472	PPI
MS.gene88776	MS.gene063472	PPI
MS.gene063472	MS.gene041489	PPI
MS.gene35068	MS.gene063472	PPI
MS.gene041390	MS.gene063472	PPI
MS.gene90744	MS.gene063472	PPI
MS.gene24286	MS.gene063472	PPI
MS.gene058693	MS.gene063472	PPI
MS.gene92376	MS.gene063472	PPI
MS.gene063472	MS.gene024000	PPI
MS.gene000035	MS.gene063472	PPI
MS.gene50329	MS.gene063472	PPI
MS.gene070462	MS.gene063472	PPI
MS.gene31637	MS.gene063472	PPI
MS.gene87573	MS.gene063472	PPI
MS.gene063472	MS.gene034677	PPI
MS.gene57537	MS.gene063472	PPI
MS.gene019504	MS.gene063472	PPI
MS.gene034762	MS.gene063472	PPI
MS.gene059156	MS.gene063472	PPI
MS.gene063472	MS.gene58316	PPI
MS.gene063472	MS.gene87584	PPI
MS.gene063472	MS.gene87564	PPI
MS.gene063472	MS.gene58315	PPI
MS.gene033444	MS.gene063472	PPI
MS.gene50306	MS.gene063472	PPI
MS.gene066639	MS.gene063472	PPI
MS.gene26949	MS.gene063472	PPI
MS.gene50309	MS.gene063472	PPI
MS.gene036760	MS.gene063472	PPI
MS.gene063472	MS.gene85454	PPI
MS.gene87200	MS.gene063472	PPI
MS.gene58311	MS.gene063472	PPI
MS.gene063472	MS.gene57538	PPI
MS.gene033432	MS.gene063472	PPI
MS.gene063472	MS.gene058693	PPI
MS.gene063472	MS.gene27319	PPI
MS.gene59639	MS.gene063472	PPI
MS.gene031590	MS.gene063472	PPI
MS.gene036584	MS.gene063472	PPI
MS.gene50327	MS.gene063472	PPI
MS.gene066635	MS.gene063472	PPI
MS.gene035261	MS.gene063472	PPI
MS.gene063472	MS.gene064083	PPI
MS.gene010758	MS.gene063472	PPI
MS.gene063670	MS.gene063472	PPI
MS.gene87586	MS.gene063472	PPI
MS.gene063472	MS.gene58783	PPI
MS.gene57530	MS.gene063472	PPI
MS.gene063472	MS.gene024420	PPI
MS.gene066626	MS.gene063472	PPI
MS.gene019506	MS.gene063472	PPI
MS.gene50326	MS.gene063472	PPI
MS.gene063472	MS.gene54541	PPI
MS.gene42451	MS.gene063472	PPI
MS.gene51200	MS.gene063472	PPI
MS.gene063472	MS.gene036584	PPI
MS.gene063472	MS.gene053299	PPI
MS.gene063472	MS.gene28758	PPI
MS.gene063472	MS.gene42451	PPI
MS.gene87564	MS.gene063472	PPI
MS.gene88774	MS.gene063472	PPI
MS.gene42452	MS.gene063472	PPI
MS.gene063472	MS.gene69307	PPI
MS.gene063414	MS.gene063472	PPI
MS.gene009892	MS.gene063472	PPI
MS.gene036662	MS.gene063472	PPI
MS.gene87563	MS.gene063472	PPI
MS.gene57526	MS.gene063472	PPI
MS.gene063472	MS.gene58314	PPI
MS.gene021553	MS.gene063472	PPI
MS.gene051820	MS.gene063472	PPI
MS.gene26957	MS.gene063472	PPI
MS.gene97996	MS.gene063472	PPI
MS.gene036582	MS.gene063472	PPI
MS.gene27021	MS.gene063472	PPI
MS.gene035235	MS.gene063472	PPI
MS.gene40988	MS.gene063472	PPI
MS.gene063472	MS.gene67501	PPI
MS.gene063472	MS.gene96406	PPI
MS.gene58320	MS.gene063472	PPI
MS.gene81242	MS.gene063472	PPI
MS.gene26101	MS.gene063472	PPI
MS.gene066120	MS.gene063472	PPI
MS.gene27283	MS.gene063472	PPI
MS.gene045140	MS.gene063472	PPI
MS.gene024004	MS.gene063472	PPI
MS.gene58781	MS.gene063472	PPI
MS.gene063472	MS.gene40878	PPI
MS.gene42444	MS.gene063472	PPI
MS.gene57717	MS.gene063472	PPI
MS.gene033440	MS.gene063472	PPI
MS.gene44886	MS.gene063472	PPI
MS.gene87562	MS.gene063472	PPI
MS.gene066623	MS.gene063472	PPI
MS.gene063472	MS.gene058703	PPI
MS.gene40904	MS.gene063472	PPI
MS.gene063472	MS.gene047279	PPI
MS.gene063472	MS.gene012215	PPI
MS.gene063472	MS.gene032969	PPI
MS.gene87569	MS.gene063472	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063472.t1	MTR_4g109280	68.852	183	52	3	2	182	180	359	5.56e-84	252
MS.gene063472.t1	MTR_6g060650	66.667	180	57	2	2	181	196	372	6.87e-82	247
MS.gene063472.t1	MTR_3g103020	64.516	186	58	4	2	182	196	378	3.39e-77	235
MS.gene063472.t1	MTR_4g117720	63.298	188	59	5	2	182	194	378	3.73e-74	228
MS.gene063472.t1	MTR_4g109270	61.413	184	66	3	2	182	183	364	1.02e-70	218
MS.gene063472.t1	MTR_3g034180	61.497	187	61	5	2	181	306	488	2.51e-70	221
MS.gene063472.t1	MTR_3g034130	62.644	174	55	4	2	168	192	362	9.77e-68	211
MS.gene063472.t1	MTR_4g117850	62.983	181	59	5	1	175	195	373	1.43e-65	205
MS.gene063472.t1	MTR_4g116320	59.783	184	63	6	1	179	78	255	1.34e-64	199
MS.gene063472.t1	MTR_4g118380	63.975	161	50	2	2	155	198	357	1.99e-64	202
MS.gene063472.t1	MTR_3g034160	60.428	187	63	5	2	181	192	374	8.06e-64	201
MS.gene063472.t1	MTR_4g094365	57.609	184	72	4	2	182	184	364	3.46e-62	196
MS.gene063472.t1	MTR_4g116330	58.378	185	70	4	2	182	199	380	3.68e-62	197
MS.gene063472.t1	MTR_4g122850	56.989	186	72	6	2	182	182	364	4.04e-61	194
MS.gene063472.t1	MTR_8g040935	56.383	188	74	4	1	182	23	208	1.85e-60	187
MS.gene063472.t1	MTR_4g118400	54.545	176	65	2	1	176	134	294	9.37e-59	186
MS.gene063472.t1	MTR_4g023130	56.831	183	69	5	2	181	137	312	1.13e-58	186
MS.gene063472.t1	MTR_8g433030	58.470	183	63	8	2	178	163	338	8.69e-58	184
MS.gene063472.t1	MTR_4g021785	54.348	184	77	4	1	182	177	355	1.92e-57	184
MS.gene063472.t1	MTR_8g032390	58.470	183	63	8	2	178	196	371	4.59e-57	183
MS.gene063472.t1	MTR_4g117780	54.891	184	80	2	2	182	184	367	1.43e-56	182
MS.gene063472.t1	MTR_4g023080	55.191	183	72	5	2	181	178	353	1.82e-56	181
MS.gene063472.t1	MTR_4g117770	54.348	184	81	2	2	182	184	367	6.93e-55	177
MS.gene063472.t1	MTR_4g117810	54.348	184	81	2	2	182	184	367	6.93e-55	177
MS.gene063472.t1	MTR_6g463430	51.913	183	80	3	2	182	26	202	2.55e-54	171
MS.gene063472.t1	MTR_4g023090	50.785	191	74	5	2	177	194	379	4.15e-53	174
MS.gene063472.t1	MTR_4g023070	50.256	195	76	6	2	181	181	369	5.82e-53	173
MS.gene063472.t1	MTR_1g055195	56.442	163	69	1	20	182	318	478	1.19e-52	175
MS.gene063472.t1	MTR_4g023380	49.758	207	72	6	2	182	179	379	2.65e-52	171
MS.gene063472.t1	MTR_1g055175	52.660	188	77	8	2	182	19	201	3.79e-52	166
MS.gene063472.t1	MTR_5g097210	55.556	180	73	5	1	177	183	358	4.07e-52	171
MS.gene063472.t1	MTR_5g070130	51.064	188	82	4	2	180	188	374	1.22e-51	170
MS.gene063472.t1	MTR_8g433040	53.514	185	67	7	2	182	195	364	1.93e-51	169
MS.gene063472.t1	MTR_8g032380	53.514	185	67	7	2	182	195	364	1.93e-51	169
MS.gene063472.t1	MTR_4g023190	53.226	186	72	7	2	180	180	357	2.27e-51	168
MS.gene063472.t1	MTR_4g023120	48.980	196	79	6	2	182	181	370	8.03e-51	167
MS.gene063472.t1	MTR_1g055165	56.287	167	64	6	20	182	157	318	2.71e-49	162
MS.gene063472.t1	MTR_5g070080	51.381	181	83	3	2	180	206	383	4.83e-49	163
MS.gene063472.t1	MTR_4g118360	63.492	126	42	2	59	182	3	126	2.40e-48	153
MS.gene063472.t1	MTR_8g102520	47.027	185	92	4	2	182	140	322	1.11e-47	158
MS.gene063472.t1	MTR_4g023150	51.075	186	77	7	2	180	180	358	1.37e-46	156
MS.gene063472.t1	MTR_4g023200	49.462	186	80	7	2	180	180	358	1.37e-46	156
MS.gene063472.t1	MTR_5g070088	46.703	182	94	2	1	180	203	383	1.98e-46	156
MS.gene063472.t1	MTR_4g118370	47.778	180	70	5	1	177	97	255	9.43e-46	151
MS.gene063472.t1	MTR_7g079400	44.444	189	95	4	2	182	151	337	2.15e-45	152
MS.gene063472.t1	MTR_4g117750	48.947	190	85	5	1	181	172	358	2.16e-45	155
MS.gene063472.t1	MTR_4g117750	61.468	109	40	1	74	180	373	481	1.78e-37	134
MS.gene063472.t1	MTR_1g055135	54.268	164	65	5	25	182	216	375	2.09e-43	148
MS.gene063472.t1	MTR_4g117870	46.703	182	58	5	2	182	124	267	2.83e-43	145
MS.gene063472.t1	MTR_4g116330	47.568	185	51	4	2	182	199	341	3.34e-41	142
MS.gene063472.t1	MTR_4g023440	43.646	181	61	3	2	182	193	332	1.16e-40	140
MS.gene063472.t1	MTR_7g079370	45.304	181	92	5	2	178	175	352	5.16e-40	139
MS.gene063472.t1	MTR_4g117530	42.541	181	70	3	2	182	107	253	7.44e-38	130
MS.gene063472.t1	MTR_5g023000	64.516	93	33	0	90	182	7	99	8.74e-38	125
MS.gene063472.t1	MTR_1g055250	46.591	176	78	10	1	169	87	253	2.75e-37	131
MS.gene063472.t1	MTR_8g098830	44.805	154	79	4	2	152	45	195	7.32e-37	127
MS.gene063472.t1	MTR_7g079450	47.887	142	67	3	42	182	2	137	7.22e-36	122
MS.gene063472.t1	MTR_4g122860	43.617	188	70	7	2	182	162	320	1.16e-34	124
MS.gene063472.t1	MTR_7g079420	40.642	187	96	7	5	182	964	1144	2.21e-34	128
MS.gene063472.t1	MTR_2g048580	36.898	187	100	7	2	182	168	342	1.19e-32	119
MS.gene063472.t1	MTR_4g114700	36.158	177	61	4	1	173	90	218	5.04e-29	107
MS.gene063472.t1	MTR_4g121580	41.667	180	68	8	1	175	195	342	9.94e-28	107
MS.gene063472.t1	MTR_7g117720	50.495	101	45	3	82	177	172	272	4.79e-22	90.1
MS.gene063472.t1	MTR_4g117430	57.647	85	32	2	2	86	75	155	5.49e-22	87.4
MS.gene063472.t1	MTR_4g023430	52.439	82	36	1	104	182	141	222	3.99e-21	86.7
MS.gene063472.t1	MTR_8g013010	58.537	82	27	3	2	83	235	309	6.62e-21	87.8
MS.gene063472.t1	MTR_4g122840	42.029	138	40	5	48	182	164	264	1.01e-19	84.0
MS.gene063472.t1	MTR_8g013005	59.322	59	24	0	124	182	1	59	4.13e-18	74.3
MS.gene063472.t1	MTR_4g109290	54.386	57	26	0	126	182	132	188	1.94e-13	65.9
MS.gene063472.t1	MTR_1g055145	48.000	75	35	2	25	98	131	202	1.01e-11	62.4
MS.gene063472.t1	MTR_3g010970	26.519	181	111	6	2	174	225	391	4.41e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 48 sgRNAs with CRISPR-Local

Find 50 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATTATGACTTGTGGGTATT+TGG	0.144797	8.4:+18265931	MS.gene063472:CDS
TATTCATTAGCGTTCAAATA+AGG	0.220938	8.4:-18265751	None:intergenic
GGAGCAGGGTTCCTCTTTAA+TGG	0.253120	8.4:+18265781	MS.gene063472:CDS
GAGCAGGGTTCCTCTTTAAT+GGG	0.265091	8.4:+18265782	MS.gene063472:CDS
TTGGAGAATTTCTCAGTCTA+TGG	0.267319	8.4:+18265950	MS.gene063472:CDS
ACGAAGCTACAGTTGAAATA+TGG	0.272308	8.4:+18265980	MS.gene063472:CDS
ACAAAATGTGGTGATATTAT+TGG	0.310598	8.4:+18266099	MS.gene063472:CDS
ACTCTTGTCCTTCCTATTGA+TGG	0.321860	8.4:+18266042	MS.gene063472:CDS
TCTTTAATGGGGCTATTCAT+TGG	0.331439	8.4:+18265794	MS.gene063472:CDS
ACCCACAAGTCATAATAATT+AGG	0.339487	8.4:-18265925	None:intergenic
ATTCATTAGCGTTCAAATAA+GGG	0.368832	8.4:-18265750	None:intergenic
TCCACATGGATTGTTGAAAT+AGG	0.371891	8.4:-18266184	None:intergenic
TTGGCGAAGTACGATGAAAA+TGG	0.379685	8.4:+18266141	MS.gene063472:CDS
TAATGGGGCTATTCATTGGT+TGG	0.427301	8.4:+18265798	MS.gene063472:CDS
AGATAATATGTGGAAAGAGC+TGG	0.433933	8.4:+18265714	None:intergenic
ATTAAAGAGGAACCCTGCTC+CGG	0.440956	8.4:-18265779	None:intergenic
TGAGTTGGAATGCCATCAAT+AGG	0.444967	8.4:-18266054	None:intergenic
ATTGGAACAGATGGTGGTAA+TGG	0.447081	8.4:+18266117	MS.gene063472:CDS
ATCCTAATTATTATGACTTG+TGG	0.450172	8.4:+18265923	MS.gene063472:CDS
TCCTAATTATTATGACTTGT+GGG	0.453742	8.4:+18265924	MS.gene063472:CDS
CGAAGCTACAGTTGAAATAT+GGG	0.462892	8.4:+18265981	MS.gene063472:CDS
TGGAGAATTTCTCAGTCTAT+GGG	0.490268	8.4:+18265951	MS.gene063472:CDS
AATGAATATAATCCCGGAGC+AGG	0.490513	8.4:+18265766	MS.gene063472:CDS
AGTCATAATAATTAGGATCA+TGG	0.492245	8.4:-18265918	None:intergenic
AATACAAAGTGCATTCGTCT+TGG	0.494278	8.4:+18266013	MS.gene063472:CDS
GAGACTCTGCTTTCACTCCC+TGG	0.504016	8.4:+18266228	MS.gene063472:CDS
TAAGCTTGCTCATTGCCACC+AGG	0.505650	8.4:-18266246	None:intergenic
CTCAGTATACATAGCCGCTC+GGG	0.506020	8.4:-18266208	None:intergenic
AACGCTAATGAATATAATCC+CGG	0.506207	8.4:+18265760	MS.gene063472:CDS
ATTTCTCAGTCTATGGGCTA+TGG	0.507502	8.4:+18265957	MS.gene063472:CDS
AATGAATAGCCCCATTAAAG+AGG	0.526680	8.4:-18265792	None:intergenic
TTAAAGAGGAACCCTGCTCC+GGG	0.544713	8.4:-18265778	None:intergenic
AATGGGTAGAAGTACTGAGT+TGG	0.583626	8.4:-18266069	None:intergenic
TAATATGTGGAAAGAGCTGG+AGG	0.586191	8.4:+18265717	None:intergenic
GGTGATATTATTGGAACAGA+TGG	0.588464	8.4:+18266108	MS.gene063472:CDS
TCTCAGTATACATAGCCGCT+CGG	0.591276	8.4:-18266209	None:intergenic
GATATTATTGGAACAGATGG+TGG	0.593108	8.4:+18266111	MS.gene063472:CDS
AACAGATGGTGGTAATGGAT+TGG	0.598103	8.4:+18266122	MS.gene063472:CDS
AGCAGGGTTCCTCTTTAATG+GGG	0.611689	8.4:+18265783	MS.gene063472:CDS
TTGGAATGCCATCAATAGGA+AGG	0.614361	8.4:-18266050	None:intergenic
TCCTATTTCAACAATCCATG+TGG	0.619417	8.4:+18266183	MS.gene063472:CDS
AAGCTTGCTCATTGCCACCA+GGG	0.620136	8.4:-18266245	None:intergenic
ATGAATATAATCCCGGAGCA+GGG	0.652117	8.4:+18265767	MS.gene063472:CDS
ATAGCCGCTCGGGATCCACA+TGG	0.663607	8.4:-18266198	None:intergenic
ACTCTGCTTTCACTCCCTGG+TGG	0.675119	8.4:+18266231	MS.gene063472:CDS
CCATTGTGCTGTACAAAATG+TGG	0.678555	8.4:+18266087	MS.gene063472:CDS
CAATCCATGTGGATCCCGAG+CGG	0.707972	8.4:+18266194	MS.gene063472:CDS
AATATGTGGAAAGAGCTGGA+GGG	0.747768	8.4:+18265718	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTCTTTTCTATTAAATCAA+AGG	-	chr8.4:18265860-18265879	None:intergenic	15.0%
!	ACAAAATGTGGTGATATTAT+TGG	+	chr8.4:18266099-18266118	MS.gene063472:CDS	25.0%
!	AGTCATAATAATTAGGATCA+TGG	-	chr8.4:18265921-18265940	None:intergenic	25.0%
!	ATCCTAATTATTATGACTTG+TGG	+	chr8.4:18265923-18265942	MS.gene063472:CDS	25.0%
!	ATTCATTAGCGTTCAAATAA+GGG	-	chr8.4:18265753-18265772	None:intergenic	25.0%
!	TATTCATTAGCGTTCAAATA+AGG	-	chr8.4:18265754-18265773	None:intergenic	25.0%
!	TGGTCAAAAATAAAATCATC+CGG	-	chr8.4:18265901-18265920	None:intergenic	25.0%
!!	ACTTTTAGATATACATTTGC+CGG	+	chr8.4:18265879-18265898	MS.gene063472:CDS	25.0%
!!	TCCTAATTATTATGACTTGT+GGG	+	chr8.4:18265924-18265943	MS.gene063472:CDS	25.0%
	AACGCTAATGAATATAATCC+CGG	+	chr8.4:18265760-18265779	MS.gene063472:CDS	30.0%
	ACCCACAAGTCATAATAATT+AGG	-	chr8.4:18265928-18265947	None:intergenic	30.0%
!	TATTATGACTTGTGGGTATT+TGG	+	chr8.4:18265931-18265950	MS.gene063472:CDS	30.0%
	AATACAAAGTGCATTCGTCT+TGG	+	chr8.4:18266013-18266032	MS.gene063472:CDS	35.0%
	AATGAATAGCCCCATTAAAG+AGG	-	chr8.4:18265795-18265814	None:intergenic	35.0%
	ACGAAGCTACAGTTGAAATA+TGG	+	chr8.4:18265980-18265999	MS.gene063472:CDS	35.0%
	CGAAGCTACAGTTGAAATAT+GGG	+	chr8.4:18265981-18266000	MS.gene063472:CDS	35.0%
	GATATTATTGGAACAGATGG+TGG	+	chr8.4:18266111-18266130	MS.gene063472:CDS	35.0%
	GGTGATATTATTGGAACAGA+TGG	+	chr8.4:18266108-18266127	MS.gene063472:CDS	35.0%
	TCCTATTTCAACAATCCATG+TGG	+	chr8.4:18266183-18266202	MS.gene063472:CDS	35.0%
	TCTTTAATGGGGCTATTCAT+TGG	+	chr8.4:18265794-18265813	MS.gene063472:CDS	35.0%
	TGGAGAATTTCTCAGTCTAT+GGG	+	chr8.4:18265951-18265970	MS.gene063472:CDS	35.0%
	TTGGAGAATTTCTCAGTCTA+TGG	+	chr8.4:18265950-18265969	MS.gene063472:CDS	35.0%
!	CACATTTTGTACAGCACAAT+GGG	-	chr8.4:18266089-18266108	None:intergenic	35.0%
!	TCCACATGGATTGTTGAAAT+AGG	-	chr8.4:18266187-18266206	None:intergenic	35.0%
	AATGAATATAATCCCGGAGC+AGG	+	chr8.4:18265766-18265785	MS.gene063472:CDS	40.0%
	ACTCTTGTCCTTCCTATTGA+TGG	+	chr8.4:18266042-18266061	MS.gene063472:CDS	40.0%
	ATGAATATAATCCCGGAGCA+GGG	+	chr8.4:18265767-18265786	MS.gene063472:CDS	40.0%
	CCATTGTGCTGTACAAAATG+TGG	+	chr8.4:18266087-18266106	MS.gene063472:CDS	40.0%
	TAATGGGGCTATTCATTGGT+TGG	+	chr8.4:18265798-18265817	MS.gene063472:CDS	40.0%
	TTGGAATGCCATCAATAGGA+AGG	-	chr8.4:18266053-18266072	None:intergenic	40.0%
	TTGGCGAAGTACGATGAAAA+TGG	+	chr8.4:18266141-18266160	MS.gene063472:CDS	40.0%
!	ATTGGAACAGATGGTGGTAA+TGG	+	chr8.4:18266117-18266136	MS.gene063472:CDS	40.0%
!	ATTTCTCAGTCTATGGGCTA+TGG	+	chr8.4:18265957-18265976	MS.gene063472:CDS	40.0%
!	CCACATTTTGTACAGCACAA+TGG	-	chr8.4:18266090-18266109	None:intergenic	40.0%
!	TGAGTTGGAATGCCATCAAT+AGG	-	chr8.4:18266057-18266076	None:intergenic	40.0%
!!	AACAGATGGTGGTAATGGAT+TGG	+	chr8.4:18266122-18266141	MS.gene063472:CDS	40.0%
!!	AATGGGTAGAAGTACTGAGT+TGG	-	chr8.4:18266072-18266091	None:intergenic	40.0%
	AGCAGGGTTCCTCTTTAATG+GGG	+	chr8.4:18265783-18265802	MS.gene063472:CDS	45.0%
	ATTAAAGAGGAACCCTGCTC+CGG	-	chr8.4:18265782-18265801	None:intergenic	45.0%
	GAGCAGGGTTCCTCTTTAAT+GGG	+	chr8.4:18265782-18265801	MS.gene063472:CDS	45.0%
	TCTCAGTATACATAGCCGCT+CGG	-	chr8.4:18266212-18266231	None:intergenic	45.0%
	CTCAGTATACATAGCCGCTC+GGG	-	chr8.4:18266211-18266230	None:intergenic	50.0%
	GGAGCAGGGTTCCTCTTTAA+TGG	+	chr8.4:18265781-18265800	MS.gene063472:CDS	50.0%
	TTAAAGAGGAACCCTGCTCC+GGG	-	chr8.4:18265781-18265800	None:intergenic	50.0%
!	AAGCTTGCTCATTGCCACCA+GGG	-	chr8.4:18266248-18266267	None:intergenic	50.0%
!	TAAGCTTGCTCATTGCCACC+AGG	-	chr8.4:18266249-18266268	None:intergenic	50.0%
	ACTCTGCTTTCACTCCCTGG+TGG	+	chr8.4:18266231-18266250	MS.gene063472:CDS	55.0%
	CAATCCATGTGGATCCCGAG+CGG	+	chr8.4:18266194-18266213	MS.gene063472:CDS	55.0%
	GAGACTCTGCTTTCACTCCC+TGG	+	chr8.4:18266228-18266247	MS.gene063472:CDS	55.0%
	ATAGCCGCTCGGGATCCACA+TGG	-	chr8.4:18266201-18266220	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	18265721	18266269	18265721	ID=MS.gene063472
chr8.4	mRNA	18265721	18266269	18265721	ID=MS.gene063472.t1;Parent=MS.gene063472
chr8.4	exon	18265721	18266269	18265721	ID=MS.gene063472.t1.exon1;Parent=MS.gene063472.t1
chr8.4	CDS	18265721	18266269	18265721	ID=cds.MS.gene063472.t1;Parent=MS.gene063472.t1

Gene Sequence

>MS.gene063472

ATGTGGAAAGAGCTGGAGGGTACTCACTTCCCTTATTTGAACGCTAATGAATATAATCCCGGAGCAGGGTTCCTCTTTAATGGGGCTATTCATTGGTTGGCTTTTAGTTGTGATCTACTATATGATGTTATTGTTGCCTTTGATTTAATAGAAAAGAAACTTTTAGATATACATTTGCCGGATGATTTTATTTTTGACCATGATCCTAATTATTATGACTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGGCTATGGACGAAGCTACAGTTGAAATATGGGTTATGAAAGAATACAAAGTGCATTCGTCTTGGACTAAGACTCTTGTCCTTCCTATTGATGGCATTCCAACTCAGTACTTCTACCCATTGTGCTGTACAAAATGTGGTGATATTATTGGAACAGATGGTGGTAATGGATTGGCGAAGTACGATGAAAATGGAGAATTACTAGACGTTCATTCCTATTTCAACAATCCATGTGGATCCCGAGCGGCTATGTATACTGAGACTCTGCTTTCACTCCCTGGTGGCAATGAGCAAGCTTAA

Protein sequence

>MS.gene063472.t1

MWKELEGTHFPYLNANEYNPGAGFLFNGAIHWLAFSCDLLYDVIVAFDLIEKKLLDIHLPDDFIFDHDPNYYDLWVFGEFLSLWAMDEATVEIWVMKEYKVHSSWTKTLVLPIDGIPTQYFYPLCCTKCGDIIGTDGGNGLAKYDENGELLDVHSYFNNPCGSRAAMYTETLLSLPGGNEQA