AlfalfaGEDB | MS.gene77858

M. sativa cultivar XinJiangDaYe / MS.gene77858

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77858.t1	AES69747.1	91.3	299	26	0	1	299	64	362	7.10E-166	593.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77858.t1	Q9SU30	30.7	212	132	7	40	238	90	299	4.0e-16	87.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77858.t1	G7IX76	91.3	299	26	0	1	299	64	362	5.1e-166	593.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene070461	MS.gene77858	PPI
MS.gene77858	MS.gene50305	PPI
MS.gene51199	MS.gene77858	PPI
MS.gene77858	MS.gene68890	PPI
MS.gene87559	MS.gene77858	PPI
MS.gene77858	MS.gene86273	PPI
MS.gene77858	MS.gene036663	PPI
MS.gene77858	MS.gene68580	PPI
MS.gene033431	MS.gene77858	PPI
MS.gene77858	MS.gene57525	PPI
MS.gene77858	MS.gene63657	PPI
MS.gene77858	MS.gene059157	PPI
MS.gene041475	MS.gene77858	PPI
MS.gene77858	MS.gene023996	PPI
MS.gene033441	MS.gene77858	PPI
MS.gene77858	MS.gene030114	PPI
MS.gene77858	MS.gene045473	PPI
MS.gene77858	MS.gene50301	PPI
MS.gene77858	MS.gene070462	PPI
MS.gene77858	MS.gene031590	PPI
MS.gene063826	MS.gene77858	PPI
MS.gene060367	MS.gene77858	PPI
MS.gene44892	MS.gene77858	PPI
MS.gene77858	MS.gene066623	PPI
MS.gene77858	MS.gene064086	PPI
MS.gene77858	MS.gene064090	PPI
MS.gene77858	MS.gene58317	PPI
MS.gene57531	MS.gene77858	PPI
MS.gene064111	MS.gene77858	PPI
MS.gene77858	MS.gene90742	PPI
MS.gene77858	MS.gene24212	PPI
MS.gene77858	MS.gene50332	PPI
MS.gene26829	MS.gene77858	PPI
MS.gene39262	MS.gene77858	PPI
MS.gene77858	MS.gene024979	PPI
MS.gene053256	MS.gene77858	PPI
MS.gene75875	MS.gene77858	PPI
MS.gene058694	MS.gene77858	PPI
MS.gene54049	MS.gene77858	PPI
MS.gene77858	MS.gene24826	PPI
MS.gene43789	MS.gene77858	PPI
MS.gene77858	MS.gene063472	PPI
MS.gene77858	MS.gene43790	PPI
MS.gene77858	MS.gene034680	PPI
MS.gene006710	MS.gene77858	PPI
MS.gene072177	MS.gene77858	PPI
MS.gene58722	MS.gene77858	PPI
MS.gene77858	MS.gene50327	PPI
MS.gene77858	MS.gene066626	PPI
MS.gene64001	MS.gene77858	PPI
MS.gene43796	MS.gene77858	PPI
MS.gene77858	MS.gene88416	PPI
MS.gene77858	MS.gene57530	PPI
MS.gene58312	MS.gene77858	PPI
MS.gene36704	MS.gene77858	PPI
MS.gene032970	MS.gene77858	PPI
MS.gene77858	MS.gene003076	PPI
MS.gene77858	MS.gene024009	PPI
MS.gene77856	MS.gene77858	PPI
MS.gene77858	MS.gene009892	PPI
MS.gene58313	MS.gene77858	PPI
MS.gene77858	MS.gene006705	PPI
MS.gene77858	MS.gene061241	PPI
MS.gene066622	MS.gene77858	PPI
MS.gene44887	MS.gene77858	PPI
MS.gene63655	MS.gene77858	PPI
MS.gene44883	MS.gene77858	PPI
MS.gene77858	MS.gene51188	PPI
MS.gene88780	MS.gene77858	PPI
MS.gene77858	MS.gene38220	PPI
MS.gene77858	MS.gene40986	PPI
MS.gene41046	MS.gene77858	PPI
MS.gene87588	MS.gene77858	PPI
MS.gene017412	MS.gene77858	PPI
MS.gene77858	MS.gene041394	PPI
MS.gene77858	MS.gene034688	PPI
MS.gene80884	MS.gene77858	PPI
MS.gene77858	MS.gene03060	PPI
MS.gene77858	MS.gene033440	PPI
MS.gene77858	MS.gene024011	PPI
MS.gene77858	MS.gene58241	PPI
MS.gene51192	MS.gene77858	PPI
MS.gene009883	MS.gene77858	PPI
MS.gene77858	MS.gene064109	PPI
MS.gene77858	MS.gene058696	PPI
MS.gene58317	MS.gene77858	PPI
MS.gene77858	MS.gene035238	PPI
MS.gene044563	MS.gene77858	PPI
MS.gene069075	MS.gene77858	PPI
MS.gene77858	MS.gene85043	PPI
MS.gene033427	MS.gene77858	PPI
MS.gene77858	MS.gene064114	PPI
MS.gene40985	MS.gene77858	PPI
MS.gene041474	MS.gene77858	PPI
MS.gene27020	MS.gene77858	PPI
MS.gene77858	MS.gene80610	PPI
MS.gene77858	MS.gene033083	PPI
MS.gene041388	MS.gene77858	PPI
MS.gene062698	MS.gene77858	PPI
MS.gene57536	MS.gene77858	PPI
MS.gene96126	MS.gene77858	PPI
MS.gene019503	MS.gene77858	PPI
MS.gene51208	MS.gene77858	PPI
MS.gene77858	MS.gene40886	PPI
MS.gene016524	MS.gene77858	PPI
MS.gene50304	MS.gene77858	PPI
MS.gene045475	MS.gene77858	PPI
MS.gene77858	MS.gene041391	PPI
MS.gene77858	MS.gene033443	PPI
MS.gene59943	MS.gene77858	PPI
MS.gene90744	MS.gene77858	PPI
MS.gene51204	MS.gene77858	PPI
MS.gene31587	MS.gene77858	PPI
MS.gene036557	MS.gene77858	PPI
MS.gene041393	MS.gene77858	PPI
MS.gene77858	MS.gene045474	PPI
MS.gene77858	MS.gene058701	PPI
MS.gene77858	MS.gene036558	PPI
MS.gene77858	MS.gene87554	PPI
MS.gene77858	MS.gene009891	PPI
MS.gene77858	MS.gene27051	PPI
MS.gene84698	MS.gene77858	PPI
MS.gene77858	MS.gene40984	PPI
MS.gene77858	MS.gene064108	PPI
MS.gene77858	MS.gene048193	PPI
MS.gene009891	MS.gene77858	PPI
MS.gene58239	MS.gene77858	PPI
MS.gene066641	MS.gene77858	PPI
MS.gene77858	MS.gene016220	PPI
MS.gene82082	MS.gene77858	PPI
MS.gene77858	MS.gene024008	PPI
MS.gene000038	MS.gene77858	PPI
MS.gene57535	MS.gene77858	PPI
MS.gene025887	MS.gene77858	PPI
MS.gene041470	MS.gene77858	PPI
MS.gene77858	MS.gene58240	PPI
MS.gene87200	MS.gene77858	PPI
MS.gene77858	MS.gene27284	PPI
MS.gene77858	MS.gene57717	PPI
MS.gene77858	MS.gene48221	PPI
MS.gene015089	MS.gene77858	PPI
MS.gene44885	MS.gene77858	PPI
MS.gene011679	MS.gene77858	PPI
MS.gene060370	MS.gene77858	PPI
MS.gene77858	MS.gene063474	PPI
MS.gene066635	MS.gene77858	PPI
MS.gene77858	MS.gene51190	PPI
MS.gene77858	MS.gene58319	PPI
MS.gene77858	MS.gene044426	PPI
MS.gene57533	MS.gene77858	PPI
MS.gene77858	MS.gene034681	PPI
MS.gene77858	MS.gene57532	PPI
MS.gene87586	MS.gene77858	PPI
MS.gene77858	MS.gene033442	PPI
MS.gene40887	MS.gene77858	PPI
MS.gene50339	MS.gene77858	PPI
MS.gene046958	MS.gene77858	PPI
MS.gene77858	MS.gene44428	PPI
MS.gene77858	MS.gene058669	PPI
MS.gene77858	MS.gene066120	PPI
MS.gene060366	MS.gene77858	PPI
MS.gene77858	MS.gene035235	PPI
MS.gene77858	MS.gene041489	PPI
MS.gene57529	MS.gene77858	PPI
MS.gene77858	MS.gene024000	PPI
MS.gene77858	MS.gene012215	PPI
MS.gene77858	MS.gene24213	PPI
MS.gene77858	MS.gene033079	PPI
MS.gene77858	MS.gene034677	PPI
MS.gene77858	MS.gene055694	PPI
MS.gene77858	MS.gene059101	PPI
MS.gene40902	MS.gene77858	PPI
MS.gene77858	MS.gene58316	PPI
MS.gene27051	MS.gene77858	PPI
MS.gene77858	MS.gene58321	PPI
MS.gene021553	MS.gene77858	PPI
MS.gene060368	MS.gene77858	PPI
MS.gene033875	MS.gene77858	PPI
MS.gene77858	MS.gene87564	PPI
MS.gene77858	MS.gene58315	PPI
MS.gene036582	MS.gene77858	PPI
MS.gene27021	MS.gene77858	PPI
MS.gene066620	MS.gene77858	PPI
MS.gene035236	MS.gene77858	PPI
MS.gene77858	MS.gene90743	PPI
MS.gene58781	MS.gene77858	PPI
MS.gene028390	MS.gene77858	PPI
MS.gene011106	MS.gene77858	PPI
MS.gene033440	MS.gene77858	PPI
MS.gene62398	MS.gene77858	PPI
MS.gene77858	MS.gene85454	PPI
MS.gene60027	MS.gene77858	PPI
MS.gene44886	MS.gene77858	PPI
MS.gene77858	MS.gene036556	PPI
MS.gene038756	MS.gene77858	PPI
MS.gene88776	MS.gene77858	PPI
MS.gene77858	MS.gene57538	PPI
MS.gene35068	MS.gene77858	PPI
MS.gene77858	MS.gene058693	PPI
MS.gene041390	MS.gene77858	PPI
MS.gene77858	MS.gene27319	PPI
MS.gene24286	MS.gene77858	PPI
MS.gene000035	MS.gene77858	PPI
MS.gene50329	MS.gene77858	PPI
MS.gene31637	MS.gene77858	PPI
MS.gene87573	MS.gene77858	PPI
MS.gene57537	MS.gene77858	PPI
MS.gene019504	MS.gene77858	PPI
MS.gene034762	MS.gene77858	PPI
MS.gene77858	MS.gene064083	PPI
MS.gene059156	MS.gene77858	PPI
MS.gene77858	MS.gene58783	PPI
MS.gene77858	MS.gene024420	PPI
MS.gene77858	MS.gene50337	PPI
MS.gene58716	MS.gene77858	PPI
MS.gene77858	MS.gene40988	PPI
MS.gene033444	MS.gene77858	PPI
MS.gene019505	MS.gene77858	PPI
MS.gene50306	MS.gene77858	PPI
MS.gene77858	MS.gene54541	PPI
MS.gene77858	MS.gene39265	PPI
MS.gene77858	MS.gene036584	PPI
MS.gene58785	MS.gene77858	PPI
MS.gene77858	MS.gene036662	PPI
MS.gene77858	MS.gene060368	PPI
MS.gene77858	MS.gene053299	PPI
MS.gene066639	MS.gene77858	PPI
MS.gene26949	MS.gene77858	PPI
MS.gene77858	MS.gene28758	PPI
MS.gene77858	MS.gene044429	PPI
MS.gene77858	MS.gene42451	PPI
MS.gene50309	MS.gene77858	PPI
MS.gene036760	MS.gene77858	PPI
MS.gene58311	MS.gene77858	PPI
MS.gene57527	MS.gene77858	PPI
MS.gene033432	MS.gene77858	PPI
MS.gene77858	MS.gene69307	PPI
MS.gene033426	MS.gene77858	PPI
MS.gene77858	MS.gene019507	PPI
MS.gene59639	MS.gene77858	PPI
MS.gene77858	MS.gene033431	PPI
MS.gene92376	MS.gene77858	PPI
MS.gene50327	MS.gene77858	PPI
MS.gene035261	MS.gene77858	PPI
MS.gene77858	MS.gene034762	PPI
MS.gene77858	MS.gene59943	PPI
MS.gene77858	MS.gene58314	PPI
MS.gene010758	MS.gene77858	PPI
MS.gene063670	MS.gene77858	PPI
MS.gene77858	MS.gene67501	PPI
MS.gene57530	MS.gene77858	PPI
MS.gene77858	MS.gene96406	PPI
MS.gene019506	MS.gene77858	PPI
MS.gene77858	MS.gene035262	PPI
MS.gene50326	MS.gene77858	PPI
MS.gene51200	MS.gene77858	PPI
MS.gene77858	MS.gene028390	PPI
MS.gene77858	MS.gene40878	PPI
MS.gene024002	MS.gene77858	PPI
MS.gene88774	MS.gene77858	PPI
MS.gene77858	MS.gene058703	PPI
MS.gene034686	MS.gene77858	PPI
MS.gene77858	MS.gene047279	PPI
MS.gene40982	MS.gene77858	PPI
MS.gene42452	MS.gene77858	PPI
MS.gene77858	MS.gene032969	PPI
MS.gene063414	MS.gene77858	PPI
MS.gene77858	MS.gene42445	PPI
MS.gene036662	MS.gene77858	PPI
MS.gene77858	MS.gene26830	PPI
MS.gene77858	MS.gene22715	PPI
MS.gene87563	MS.gene77858	PPI
MS.gene57526	MS.gene77858	PPI
MS.gene77858	MS.gene51207	PPI
MS.gene051820	MS.gene77858	PPI
MS.gene26957	MS.gene77858	PPI
MS.gene97996	MS.gene77858	PPI
MS.gene77858	MS.gene36595	PPI
MS.gene58320	MS.gene77858	PPI
MS.gene77858	MS.gene024004	PPI
MS.gene77858	MS.gene045140	PPI
MS.gene81242	MS.gene77858	PPI
MS.gene26101	MS.gene77858	PPI
MS.gene27283	MS.gene77858	PPI
MS.gene64203	MS.gene77858	PPI
MS.gene045140	MS.gene77858	PPI
MS.gene77858	MS.gene061240	PPI
MS.gene024004	MS.gene77858	PPI
MS.gene42444	MS.gene77858	PPI
MS.gene77858	MS.gene041473	PPI
MS.gene51202	MS.gene77858	PPI
MS.gene77858	MS.gene50311	PPI
MS.gene87562	MS.gene77858	PPI
MS.gene77858	MS.gene035234	PPI
MS.gene77858	MS.gene058989	PPI
MS.gene40904	MS.gene77858	PPI
MS.gene77858	MS.gene041468	PPI
MS.gene77858	MS.gene041395	PPI
MS.gene87569	MS.gene77858	PPI
MS.gene77858	MS.gene42447	PPI
MS.gene064104	MS.gene77858	PPI
MS.gene77858	MS.gene51189	PPI
MS.gene041491	MS.gene77858	PPI
MS.gene77858	MS.gene046958	PPI
MS.gene033443	MS.gene77858	PPI
MS.gene77858	MS.gene24286	PPI
MS.gene059096	MS.gene77858	PPI
MS.gene57528	MS.gene77858	PPI
MS.gene77858	MS.gene044425	PPI
MS.gene50297	MS.gene77858	PPI
MS.gene006711	MS.gene77858	PPI
MS.gene77858	MS.gene87584	PPI
MS.gene27285	MS.gene77858	PPI
MS.gene064091	MS.gene77858	PPI
MS.gene064112	MS.gene77858	PPI
MS.gene045476	MS.gene77858	PPI
MS.gene77858	MS.gene59637	PPI
MS.gene77858	MS.gene24173	PPI
MS.gene85043	MS.gene77858	PPI
MS.gene24208	MS.gene77858	PPI
MS.gene50307	MS.gene77858	PPI
MS.gene034690	MS.gene77858	PPI
MS.gene77858	MS.gene27022	PPI
MS.gene96407	MS.gene77858	PPI
MS.gene77858	MS.gene035261	PPI
MS.gene77858	MS.gene87585	PPI
MS.gene77857	MS.gene77858	PPI
MS.gene77858	MS.gene023999	PPI
MS.gene77858	MS.gene036599	PPI
MS.gene51191	MS.gene77858	PPI
MS.gene77858	MS.gene036581	PPI
MS.gene033430	MS.gene77858	PPI
MS.gene77858	MS.gene035237	PPI
MS.gene50298	MS.gene77858	PPI
MS.gene67687	MS.gene77858	PPI
MS.gene035262	MS.gene77858	PPI
MS.gene77858	MS.gene000036	PPI
MS.gene036583	MS.gene77858	PPI
MS.gene77858	MS.gene50309	PPI
MS.gene77858	MS.gene50320	PPI
MS.gene77858	MS.gene87557	PPI
MS.gene77858	MS.gene035263	PPI
MS.gene77858	MS.gene036664	PPI
MS.gene71159	MS.gene77858	PPI
MS.gene77858	MS.gene053257	PPI
MS.gene96448	MS.gene77858	PPI
MS.gene77858	MS.gene51201	PPI
MS.gene058692	MS.gene77858	PPI
MS.gene041392	MS.gene77858	PPI
MS.gene77858	MS.gene009893	PPI
MS.gene033083	MS.gene77858	PPI
MS.gene77858	MS.gene50336	PPI
MS.gene69309	MS.gene77858	PPI
MS.gene63658	MS.gene77858	PPI
MS.gene033081	MS.gene77858	PPI
MS.gene77858	MS.gene77704	PPI
MS.gene031591	MS.gene77858	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77858.t1	MTR_3g034130	91.304	299	26	0	1	299	64	362	0.0	573
MS.gene77858.t1	MTR_3g034180	87.859	313	37	1	1	313	178	489	0.0	560
MS.gene77858.t1	MTR_3g034160	84.936	312	46	1	1	312	64	374	0.0	517
MS.gene77858.t1	MTR_3g103020	63.376	314	100	6	3	312	75	377	3.35e-128	370
MS.gene77858.t1	MTR_4g117720	59.938	322	105	9	1	312	70	377	1.46e-119	348
MS.gene77858.t1	MTR_6g060650	58.696	322	112	6	1	312	62	372	1.23e-116	341
MS.gene77858.t1	MTR_4g109270	55.975	318	116	8	1	312	64	363	3.79e-106	314
MS.gene77858.t1	MTR_4g122850	54.088	318	129	9	2	313	58	364	9.73e-104	308
MS.gene77858.t1	MTR_4g109280	59.048	315	110	8	1	312	60	358	7.32e-103	305
MS.gene77858.t1	MTR_4g094365	52.978	319	127	8	1	313	63	364	7.25e-98	293
MS.gene77858.t1	MTR_4g117850	54.662	311	115	10	7	310	85	376	1.96e-97	292
MS.gene77858.t1	MTR_4g117770	53.968	315	117	7	9	313	71	367	2.69e-95	286
MS.gene77858.t1	MTR_4g117810	53.968	315	117	7	9	313	71	367	2.69e-95	286
MS.gene77858.t1	MTR_4g118380	53.094	307	112	6	1	286	62	357	2.27e-94	284
MS.gene77858.t1	MTR_4g023080	52.548	314	123	8	1	312	64	353	7.61e-94	282
MS.gene77858.t1	MTR_5g097210	50.809	309	136	6	3	310	67	360	2.13e-91	277
MS.gene77858.t1	MTR_4g023090	48.649	333	134	9	1	313	71	386	8.80e-91	276
MS.gene77858.t1	MTR_4g116330	50.809	309	131	7	10	312	86	379	8.75e-89	270
MS.gene77858.t1	MTR_4g117780	49.536	323	132	8	1	313	66	367	1.90e-88	269
MS.gene77858.t1	MTR_4g021785	50.649	308	127	7	7	312	70	354	1.14e-87	266
MS.gene77858.t1	MTR_4g117750	51.411	319	126	8	3	312	60	358	1.19e-87	271
MS.gene77858.t1	MTR_4g117750	55.963	109	46	1	205	311	373	481	5.32e-31	121
MS.gene77858.t1	MTR_5g070080	48.649	333	133	8	4	312	67	385	4.04e-87	266
MS.gene77858.t1	MTR_5g070130	49.845	323	136	10	3	312	67	376	3.58e-86	264
MS.gene77858.t1	MTR_4g117870	49.045	314	112	6	1	313	1	267	4.82e-86	259
MS.gene77858.t1	MTR_4g023070	48.788	330	133	11	1	312	58	369	8.28e-84	257
MS.gene77858.t1	MTR_1g055135	48.726	314	141	8	7	312	73	374	1.18e-83	257
MS.gene77858.t1	MTR_1g055195	50.167	299	118	7	20	310	200	475	7.62e-82	256
MS.gene77858.t1	MTR_4g023380	47.164	335	117	9	7	313	77	379	9.52e-82	252
MS.gene77858.t1	MTR_4g023120	48.632	329	137	11	1	313	58	370	4.45e-81	250
MS.gene77858.t1	MTR_8g433040	49.843	319	123	10	4	313	74	364	5.32e-81	250
MS.gene77858.t1	MTR_8g032380	49.843	319	123	10	4	313	74	364	5.32e-81	250
MS.gene77858.t1	MTR_4g023130	50.347	288	119	7	27	312	47	312	6.36e-79	243
MS.gene77858.t1	MTR_4g023190	49.057	318	130	11	1	311	65	357	4.08e-78	242
MS.gene77858.t1	MTR_4g023200	47.799	318	135	11	1	311	65	358	2.40e-77	240
MS.gene77858.t1	MTR_4g023150	46.688	317	140	10	1	311	65	358	5.38e-75	234
MS.gene77858.t1	MTR_4g023440	45.367	313	117	7	1	313	74	332	7.71e-75	233
MS.gene77858.t1	MTR_5g070088	44.776	335	150	9	3	313	63	386	1.25e-74	234
MS.gene77858.t1	MTR_8g032390	47.152	316	119	11	2	308	94	370	6.03e-73	229
MS.gene77858.t1	MTR_4g116320	56.250	224	83	6	91	310	43	255	8.29e-71	220
MS.gene77858.t1	MTR_4g118400	45.847	301	115	8	16	307	33	294	1.04e-70	221
MS.gene77858.t1	MTR_8g013010	57.407	216	75	6	1	214	109	309	1.40e-68	216
MS.gene77858.t1	MTR_4g118370	46.316	285	121	7	28	310	3	257	2.62e-68	214
MS.gene77858.t1	MTR_8g040935	53.774	212	86	4	107	312	2	207	5.32e-65	204
MS.gene77858.t1	MTR_4g116330	43.689	309	114	8	10	312	86	340	4.79e-63	203
MS.gene77858.t1	MTR_7g079400	41.234	308	158	8	14	312	43	336	1.23e-61	199
MS.gene77858.t1	MTR_8g433030	43.590	312	103	10	2	308	94	337	4.96e-61	197
MS.gene77858.t1	MTR_7g079370	41.587	315	158	8	7	307	48	350	1.73e-59	194
MS.gene77858.t1	MTR_4g121580	44.118	306	121	13	7	303	75	339	2.70e-56	187
MS.gene77858.t1	MTR_1g055165	40.256	313	123	8	3	312	66	317	3.77e-55	182
MS.gene77858.t1	MTR_1g055175	49.246	199	91	5	118	312	8	200	2.71e-51	168
MS.gene77858.t1	MTR_8g102520	38.924	316	141	11	7	312	48	321	2.83e-51	172
MS.gene77858.t1	MTR_4g117530	41.860	258	90	8	63	312	47	252	3.28e-49	164
MS.gene77858.t1	MTR_1g055250	43.777	233	112	9	74	300	34	253	3.52e-49	167
MS.gene77858.t1	MTR_6g463430	45.714	210	98	6	109	313	4	202	5.82e-48	160
MS.gene77858.t1	MTR_4g117430	50.286	175	63	6	46	217	2	155	3.33e-46	154
MS.gene77858.t1	MTR_4g116340	50.000	176	72	5	10	180	83	247	1.32e-43	150
MS.gene77858.t1	MTR_4g114700	39.777	269	101	7	42	304	5	218	5.29e-43	148
MS.gene77858.t1	MTR_2g048580	31.715	309	165	10	10	312	73	341	4.98e-38	138
MS.gene77858.t1	MTR_4g118360	60.000	115	42	2	200	312	13	125	6.66e-37	129
MS.gene77858.t1	MTR_7g079420	35.106	282	126	11	45	312	905	1143	1.19e-35	137
MS.gene77858.t1	MTR_8g098830	41.379	174	88	5	114	282	30	194	2.26e-33	122
MS.gene77858.t1	MTR_5g023000	62.105	95	36	0	218	312	4	98	4.32e-33	118
MS.gene77858.t1	MTR_6g034720	42.105	190	87	7	40	223	31	203	8.28e-32	118
MS.gene77858.t1	MTR_7g117720	53.472	144	51	7	7	145	52	184	2.87e-31	118
MS.gene77858.t1	MTR_7g117720	46.535	101	49	3	213	308	172	272	2.70e-14	72.0
MS.gene77858.t1	MTR_4g122860	40.201	199	77	7	123	313	156	320	9.09e-31	119
MS.gene77858.t1	MTR_7g079450	40.000	150	65	5	174	312	1	136	6.06e-23	92.8
MS.gene77858.t1	MTR_1g068875	28.689	244	143	11	16	243	63	291	1.10e-21	94.4
MS.gene77858.t1	MTR_5g069120	45.736	129	61	2	6	127	51	177	1.02e-20	87.8
MS.gene77858.t1	MTR_4g122840	42.647	136	40	4	181	313	164	264	2.03e-20	89.0
MS.gene77858.t1	MTR_4g133170	30.415	217	124	11	36	238	82	285	4.45e-19	87.0
MS.gene77858.t1	MTR_2g026010	29.279	222	138	8	35	242	81	297	1.93e-18	85.5
MS.gene77858.t1	MTR_8g013005	68.966	58	18	0	255	312	1	58	3.86e-18	77.4
MS.gene77858.t1	MTR_2g021155	31.551	187	106	7	59	238	711	882	4.78e-18	85.1
MS.gene77858.t1	MTR_2g021155	31.278	227	127	10	22	238	110	317	1.13e-13	72.0
MS.gene77858.t1	MTR_0667s0010	26.460	291	173	11	6	268	57	334	5.25e-18	84.3
MS.gene77858.t1	MTR_2g426020	24.653	288	171	11	18	276	71	341	8.18e-18	83.6
MS.gene77858.t1	MTR_2g031640	26.667	225	140	7	33	242	81	295	9.86e-18	83.2
MS.gene77858.t1	MTR_2g024110	25.610	246	153	9	7	238	60	289	1.00e-17	83.2
MS.gene77858.t1	MTR_2g028160	28.755	233	140	8	57	274	130	351	1.85e-17	82.8
MS.gene77858.t1	MTR_4g023430	53.659	82	35	1	235	313	141	222	3.17e-17	79.3
MS.gene77858.t1	MTR_4g070550	26.154	260	147	10	13	238	63	311	7.26e-17	80.9
MS.gene77858.t1	MTR_1g055200	51.163	86	37	2	42	127	5	85	1.33e-16	74.7
MS.gene77858.t1	MTR_2g028130	30.472	233	131	11	47	261	117	336	1.45e-16	80.1
MS.gene77858.t1	MTR_2g025960	26.277	274	153	11	39	282	1	255	1.59e-16	79.0
MS.gene77858.t1	MTR_1g068835	28.279	244	145	12	16	243	63	292	1.99e-16	79.3
MS.gene77858.t1	MTR_1g068860	27.004	237	146	8	21	243	71	294	2.10e-16	79.3
MS.gene77858.t1	MTR_2g078870	30.196	255	145	11	59	305	78	307	5.03e-16	77.4
MS.gene77858.t1	MTR_3g083010	25.279	269	159	9	37	276	102	357	5.85e-16	78.2
MS.gene77858.t1	MTR_4g055060	29.600	250	142	12	8	243	93	322	3.20e-15	75.9
MS.gene77858.t1	MTR_2g028140	26.697	221	125	7	44	238	108	317	3.28e-15	75.9
MS.gene77858.t1	MTR_3g010920	26.923	260	142	9	58	305	158	381	6.88e-15	75.1
MS.gene77858.t1	MTR_3g010970	27.076	277	153	11	41	305	152	391	7.27e-15	74.7
MS.gene77858.t1	MTR_6g053260	28.571	210	127	9	34	238	429	620	1.20e-14	74.7
MS.gene77858.t1	MTR_2g024100	26.295	251	136	10	20	238	73	306	2.77e-14	73.2
MS.gene77858.t1	MTR_2g425980	29.756	205	111	9	57	242	122	312	4.63e-14	72.8
MS.gene77858.t1	MTR_7g070830	26.667	240	135	10	56	264	146	375	5.07e-14	72.4
MS.gene77858.t1	MTR_1g054725	28.826	281	160	16	43	305	117	375	5.66e-14	72.0
MS.gene77858.t1	MTR_6g065980	29.500	200	112	9	44	240	111	284	1.53e-13	70.9
MS.gene77858.t1	MTR_6g027910	28.638	213	128	6	38	238	106	306	2.46e-13	70.1
MS.gene77858.t1	MTR_3g036290	29.469	207	113	9	41	243	117	294	2.73e-13	70.1
MS.gene77858.t1	MTR_7g013590	27.778	216	141	5	29	238	114	320	3.29e-13	70.1
MS.gene77858.t1	MTR_2g031720	24.883	213	136	7	44	242	97	299	4.00e-13	69.7
MS.gene77858.t1	MTR_3g006570	26.481	287	158	13	44	305	118	376	5.10e-13	69.3
MS.gene77858.t1	MTR_2g021190	27.632	228	138	10	20	238	95	304	5.57e-13	69.3
MS.gene77858.t1	MTR_8g099460	25.103	243	145	10	23	242	73	301	6.56e-13	68.9
MS.gene77858.t1	MTR_8g464770	25.962	312	188	14	17	307	88	377	7.56e-13	68.9
MS.gene77858.t1	MTR_3g023930	28.364	275	147	13	44	305	130	367	7.63e-13	68.9
MS.gene77858.t1	MTR_0044s0300	28.365	208	110	11	44	240	138	317	8.36e-13	68.9
MS.gene77858.t1	MTR_2g461450	26.697	221	136	8	30	243	95	296	9.87e-13	68.6
MS.gene77858.t1	MTR_0129s0050	26.897	290	162	11	56	308	130	406	1.12e-12	68.6
MS.gene77858.t1	MTR_3g007410	28.708	209	125	9	44	243	146	339	1.29e-12	68.2
MS.gene77858.t1	MTR_4g109290	62.264	53	20	0	260	312	135	187	1.40e-12	65.9
MS.gene77858.t1	MTR_3g010620	26.367	311	165	12	22	305	119	392	1.43e-12	68.2
MS.gene77858.t1	MTR_3g007360	28.436	211	123	9	44	243	146	339	1.63e-12	67.8
MS.gene77858.t1	MTR_3g083640	25.850	294	180	11	23	305	136	402	1.87e-12	67.8
MS.gene77858.t1	MTR_5g097680	25.795	283	161	11	59	308	159	425	2.14e-12	67.8
MS.gene77858.t1	MTR_3g009310	28.947	190	116	6	55	243	156	327	2.34e-12	67.4
MS.gene77858.t1	MTR_2g031680	26.068	234	146	9	23	242	72	292	2.41e-12	67.4
MS.gene77858.t1	MTR_2g078900	28.718	195	109	9	59	248	153	322	2.86e-12	67.0
MS.gene77858.t1	MTR_4g030830	26.364	220	117	10	44	238	113	312	3.83e-12	66.6
MS.gene77858.t1	MTR_3g007330	28.910	211	119	8	44	243	138	328	4.24e-12	66.6
MS.gene77858.t1	MTR_3g030250	26.165	279	162	12	39	305	133	379	7.09e-12	65.9
MS.gene77858.t1	MTR_2g064960	68.293	41	13	0	272	312	18	58	1.00e-11	59.7
MS.gene77858.t1	MTR_3g010590	24.731	279	166	10	41	305	137	385	1.02e-11	65.5
MS.gene77858.t1	MTR_3g036430	25.000	248	147	12	1	238	51	269	1.24e-11	65.1
MS.gene77858.t1	MTR_2g426060	26.033	242	134	11	31	242	86	312	1.49e-11	65.1
MS.gene77858.t1	MTR_8g046310	25.714	280	168	9	43	309	125	377	1.78e-11	64.7
MS.gene77858.t1	MTR_5g086590	26.667	195	122	6	56	242	13	194	1.80e-11	63.5
MS.gene77858.t1	MTR_3g010430	28.837	215	108	11	44	240	133	320	2.02e-11	64.7
MS.gene77858.t1	MTR_4g023100	59.649	57	21	1	257	313	65	119	2.11e-11	60.8
MS.gene77858.t1	MTR_3g006670	30.244	205	114	11	44	238	147	332	2.19e-11	64.7
MS.gene77858.t1	MTR_3g024130	27.830	212	126	10	41	243	58	251	2.53e-11	63.9
MS.gene77858.t1	MTR_2g021252	25.417	240	147	7	3	238	105	316	2.58e-11	64.3
MS.gene77858.t1	MTR_3g010870	25.180	278	171	10	41	305	131	384	2.83e-11	64.3
MS.gene77858.t1	MTR_5g037680	25.000	264	163	8	55	305	140	381	4.73e-11	63.5
MS.gene77858.t1	MTR_7g055870	25.076	331	168	15	36	305	113	424	6.76e-11	63.2
MS.gene77858.t1	MTR_4g013175	26.506	249	138	8	41	259	121	354	6.90e-11	63.2
MS.gene77858.t1	MTR_3g013740	28.155	206	120	8	44	238	150	338	7.01e-11	63.2
MS.gene77858.t1	MTR_5g046300	26.047	215	120	10	44	246	100	287	7.66e-11	62.8
MS.gene77858.t1	MTR_5g046290	26.047	215	120	10	44	246	100	287	7.66e-11	62.8
MS.gene77858.t1	MTR_5g046280	26.047	215	120	10	44	246	3	190	7.89e-11	61.6
MS.gene77858.t1	MTR_6g027890	26.360	239	145	7	19	238	30	256	8.42e-11	62.4
MS.gene77858.t1	MTR_7g060960	27.149	221	106	10	41	238	106	294	8.64e-11	62.8
MS.gene77858.t1	MTR_0054s0090	24.648	284	171	10	57	310	136	406	9.25e-11	62.8
MS.gene77858.t1	MTR_4g006270	26.267	217	116	11	35	236	81	268	9.58e-11	62.8
MS.gene77858.t1	MTR_4g028510	26.804	291	159	12	53	310	133	402	9.61e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77858.t1	AT4G12560	31.776	214	129	9	40	239	90	300	4.42e-16	78.6
MS.gene77858.t1	AT4G12560	31.776	214	129	9	40	239	90	300	4.42e-16	78.6
MS.gene77858.t1	AT4G12560	31.776	214	129	9	40	239	90	300	4.42e-16	78.6
MS.gene77858.t1	AT3G06240	29.915	234	126	12	39	259	163	371	1.74e-15	77.0
MS.gene77858.t1	AT4G22390	25.000	288	197	10	40	312	90	373	1.28e-13	71.2
MS.gene77858.t1	AT4G22390	25.000	288	197	10	40	312	90	373	1.49e-13	71.2

Find 66 sgRNAs with CRISPR-Local

Find 83 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCATTTGCATTCATATAATA+AGG	0.164755	3.4:+25728002	None:intergenic
ACAAAATGTGGTCATATTAT+TGG	0.222453	3.4:-25727660	MS.gene77858:CDS
GATTGCGACTTGTGGATATT+TGG	0.229674	3.4:-25727828	MS.gene77858:CDS
GAGTCTCTGCTTTCACTTCC+TGG	0.246781	3.4:-25727531	MS.gene77858:CDS
AAATATTTATGTTGTCTATA+TGG	0.249954	3.4:-25728194	MS.gene77858:CDS
TTGGAGAATCTCTTAGTCTA+TGG	0.250171	3.4:-25727809	MS.gene77858:CDS
GGGATGAAACAATTGAAATA+TGG	0.254108	3.4:-25727779	MS.gene77858:CDS
ATTCGGGAAGGGTAAAATTA+AGG	0.295620	3.4:+25728351	None:intergenic
TTATGTTGTCTATATGGTTT+TGG	0.316449	3.4:-25728188	MS.gene77858:CDS
TTTAGTGGAAAGGGAACTTT+TGG	0.350116	3.4:-25727889	MS.gene77858:CDS
CTCAAGATTAGAATAAGATT+CGG	0.391566	3.4:+25728334	None:intergenic
CCATTCAACAGATGATTACT+TGG	0.402778	3.4:-25728159	MS.gene77858:CDS
TATTGTTGGCTTTGATTTAG+TGG	0.408892	3.4:-25727904	MS.gene77858:CDS
ACTCATGTCCTATCTATTGA+TGG	0.417668	3.4:-25727717	MS.gene77858:CDS
CATTTGCATTCATATAATAA+GGG	0.419807	3.4:+25728003	None:intergenic
GGATGAAACAATTGAAATAT+GGG	0.428889	3.4:-25727778	MS.gene77858:CDS
TCAAGATTAGAATAAGATTC+GGG	0.434009	3.4:+25728335	None:intergenic
ATCTCTTAGTCTATGGGCTA+TGG	0.437718	3.4:-25727802	MS.gene77858:CDS
AATACAAAGTGCATTCATCT+TGG	0.438377	3.4:-25727746	MS.gene77858:CDS
ATTGGAACAAATGGTGGTAC+TGG	0.446274	3.4:-25727642	MS.gene77858:CDS
TGCAAAGGCCATCAATAGAT+AGG	0.463669	3.4:+25727709	None:intergenic
TGGCTTTGATTTAGTGGAAA+GGG	0.464379	3.4:-25727898	MS.gene77858:CDS
GGTTCATGGTCAAAACCATA+TGG	0.465294	3.4:+25727855	None:intergenic
TCTAAATTGGAAGGAGGAAA+AGG	0.467688	3.4:+25728221	None:intergenic
TCTCTTAGTCTATGGGCTAT+GGG	0.468938	3.4:-25727801	MS.gene77858:CDS
ATCCACAAGTCGCAATCTAT+AGG	0.470253	3.4:+25727834	None:intergenic
AGTCGCAATCTATAGGTTCA+TGG	0.474603	3.4:+25727841	None:intergenic
ATTCTTTAAACATCTACCTA+TGG	0.477271	3.4:-25728274	MS.gene77858:CDS
TGGGTCTATACTCGTATCAT+AGG	0.480780	3.4:+25728124	None:intergenic
CTCTGTATACATAGCCACTA+GGG	0.491428	3.4:+25727551	None:intergenic
TGAGTATACTTCACCAATCC+AGG	0.492432	3.4:+25728029	None:intergenic
TGGTCAAAACCATATGGAAA+AGG	0.495906	3.4:+25727861	None:intergenic
ATAGATCGAATTTCAAGAGC+TGG	0.499184	3.4:+25728422	None:intergenic
GGTCATATTATTGGAACAAA+TGG	0.505789	3.4:-25727651	MS.gene77858:CDS
TGGAGAATCTCTTAGTCTAT+GGG	0.505807	3.4:-25727808	MS.gene77858:CDS
GCAAATGATGATCCCAAAGT+AGG	0.511115	3.4:-25727987	MS.gene77858:CDS
TTTCATTGAGAGCTAATACA+TGG	0.514712	3.4:-25728067	MS.gene77858:CDS
CCAAGTAATCATCTGTTGAA+TGG	0.522116	3.4:+25728159	None:intergenic
TGGAACGAAATTGAGTGTCC+TGG	0.524624	3.4:-25728047	MS.gene77858:CDS
AACCTATAGATTGCGACTTG+TGG	0.531655	3.4:-25727836	MS.gene77858:CDS
CGAAATTGAGTGTCCTGGAT+TGG	0.536602	3.4:-25728042	MS.gene77858:CDS
TAAATTTGCTCACTGTCACC+AGG	0.541338	3.4:+25727513	None:intergenic
CTCTTAGTCTATGGGCTATG+GGG	0.547001	3.4:-25727800	MS.gene77858:CDS
GAGATTAAAAGTTCATGTAG+AGG	0.554611	3.4:-25728314	MS.gene77858:CDS
TACCTATGGAATCCATCCAC+TGG	0.559625	3.4:-25728260	MS.gene77858:CDS
CAAATGATGATCCCAAAGTA+GGG	0.565983	3.4:-25727986	MS.gene77858:CDS
TTCAACAGATGATTACTTGG+TGG	0.569107	3.4:-25728156	MS.gene77858:CDS
TTGGCTTTGATTTAGTGGAA+AGG	0.569861	3.4:-25727899	MS.gene77858:CDS
CCAATATGCTCTACAAAATG+TGG	0.574609	3.4:-25727672	MS.gene77858:CDS
TGTTTGTGACGTCCAGTGGA+TGG	0.578837	3.4:+25728248	None:intergenic
CATATTATTGGAACAAATGG+TGG	0.593852	3.4:-25727648	MS.gene77858:CDS
TTTGCATCTAAATTGGAAGG+AGG	0.595652	3.4:+25728215	None:intergenic
AACAAATGGTGGTACTGGAT+TGG	0.595655	3.4:-25727637	MS.gene77858:CDS
TCTTAGTCTATGGGCTATGG+GGG	0.597456	3.4:-25727799	MS.gene77858:CDS
GATTAGAATAAGATTCGGGA+AGG	0.600233	3.4:+25728339	None:intergenic
GGGGATCATACTGAATGCAA+AGG	0.602959	3.4:+25727694	None:intergenic
TATTTGTTTGTGACGTCCAG+TGG	0.604020	3.4:+25728244	None:intergenic
ACTGGATTGGTAAAGTATGA+TGG	0.604096	3.4:-25727624	MS.gene77858:CDS
CGATCCATGTGGACCCCTAG+TGG	0.608860	3.4:-25727565	MS.gene77858:CDS
ACTCTGTATACATAGCCACT+AGG	0.618200	3.4:+25727550	None:intergenic
ATAGCCACTAGGGGTCCACA+TGG	0.637265	3.4:+25727561	None:intergenic
TTGGTAAAGTATGATGGCAA+TGG	0.666893	3.4:-25727618	MS.gene77858:CDS
GTCCAGTGGATGGATTCCAT+AGG	0.672791	3.4:+25728258	None:intergenic
ATTAGAATAAGATTCGGGAA+GGG	0.674866	3.4:+25728340	None:intergenic
TCTGTATACATAGCCACTAG+GGG	0.698983	3.4:+25727552	None:intergenic
TCATACTATAACGATCCATG+TGG	0.759444	3.4:-25727576	MS.gene77858:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATGAAATATTATCTTTTATT+GGG	+	chr3.4:25727841-25727860	None:intergenic	10.0%
!!	AAATATTTATGTTGTCTATA+TGG	-	chr3.4:25727749-25727768	MS.gene77858:CDS	15.0%
!!!	GATGAAATATTATCTTTTAT+TGG	+	chr3.4:25727842-25727861	None:intergenic	15.0%
!!!	TAAATATTTTGCATCTAAAT+TGG	+	chr3.4:25727738-25727757	None:intergenic	15.0%
!!	CATTTGCATTCATATAATAA+GGG	+	chr3.4:25727943-25727962	None:intergenic	20.0%
!!	TCATTTGCATTCATATAATA+AGG	+	chr3.4:25727944-25727963	None:intergenic	20.0%
!	ACAAAATGTGGTCATATTAT+TGG	-	chr3.4:25728283-25728302	MS.gene77858:CDS	25.0%
!	ATTCTTTAAACATCTACCTA+TGG	-	chr3.4:25727669-25727688	MS.gene77858:CDS	25.0%
!	CTCAAGATTAGAATAAGATT+CGG	+	chr3.4:25727612-25727631	None:intergenic	25.0%
!	GGATGAAACAATTGAAATAT+GGG	-	chr3.4:25728165-25728184	MS.gene77858:CDS	25.0%
!	TAGCATCCATTAAAAAATCA+TGG	+	chr3.4:25728021-25728040	None:intergenic	25.0%
!	TCAAGATTAGAATAAGATTC+GGG	+	chr3.4:25727611-25727630	None:intergenic	25.0%
!!	TATTTTGCATCTAAATTGGA+AGG	+	chr3.4:25727734-25727753	None:intergenic	25.0%
!!	TTATGTTGTCTATATGGTTT+TGG	-	chr3.4:25727755-25727774	MS.gene77858:CDS	25.0%
!!	TTTTTAATGGGACTATTCAT+TGG	-	chr3.4:25727984-25728003	MS.gene77858:CDS	25.0%
!!!	TTTTCGCCATGATTTTTTAA+TGG	-	chr3.4:25728012-25728031	MS.gene77858:CDS	25.0%
!!!	TTTTTAATGGATGCTATTGT+TGG	-	chr3.4:25728025-25728044	MS.gene77858:CDS	25.0%
	AATACAAAGTGCATTCATCT+TGG	-	chr3.4:25728197-25728216	MS.gene77858:CDS	30.0%
	ATTAGAATAAGATTCGGGAA+GGG	+	chr3.4:25727606-25727625	None:intergenic	30.0%
	CATATTATTGGAACAAATGG+TGG	-	chr3.4:25728295-25728314	MS.gene77858:CDS	30.0%
	GAGATTAAAAGTTCATGTAG+AGG	-	chr3.4:25727629-25727648	MS.gene77858:CDS	30.0%
	GGGATGAAACAATTGAAATA+TGG	-	chr3.4:25728164-25728183	MS.gene77858:CDS	30.0%
	GGTCATATTATTGGAACAAA+TGG	-	chr3.4:25728292-25728311	MS.gene77858:CDS	30.0%
	TTTCATTGAGAGCTAATACA+TGG	-	chr3.4:25727876-25727895	MS.gene77858:CDS	30.0%
!	ACATTTTGTAGAGCATATTG+GGG	+	chr3.4:25728272-25728291	None:intergenic	30.0%
!	CACATTTTGTAGAGCATATT+GGG	+	chr3.4:25728273-25728292	None:intergenic	30.0%
!!	TATTGTTGGCTTTGATTTAG+TGG	-	chr3.4:25728039-25728058	MS.gene77858:CDS	30.0%
	ACTCATGTCCTATCTATTGA+TGG	-	chr3.4:25728226-25728245	MS.gene77858:CDS	35.0%
	ATAGATCGAATTTCAAGAGC+TGG	+	chr3.4:25727524-25727543	None:intergenic	35.0%
	ATTCGGGAAGGGTAAAATTA+AGG	+	chr3.4:25727595-25727614	None:intergenic	35.0%
	CAAATGATGATCCCAAAGTA+GGG	-	chr3.4:25727957-25727976	MS.gene77858:CDS	35.0%
	CCAAGTAATCATCTGTTGAA+TGG	+	chr3.4:25727787-25727806	None:intergenic	35.0%
	CCAATATGCTCTACAAAATG+TGG	-	chr3.4:25728271-25728290	MS.gene77858:CDS	35.0%
	CCATTCAACAGATGATTACT+TGG	-	chr3.4:25727784-25727803	MS.gene77858:CDS	35.0%
	GATTAGAATAAGATTCGGGA+AGG	+	chr3.4:25727607-25727626	None:intergenic	35.0%
	TCATACTATAACGATCCATG+TGG	-	chr3.4:25728367-25728386	MS.gene77858:CDS	35.0%
	TCTAAATTGGAAGGAGGAAA+AGG	+	chr3.4:25727725-25727744	None:intergenic	35.0%
	TGGAGAATCTCTTAGTCTAT+GGG	-	chr3.4:25728135-25728154	MS.gene77858:CDS	35.0%
	TGGTCAAAACCATATGGAAA+AGG	+	chr3.4:25728085-25728104	None:intergenic	35.0%
	TTCAACAGATGATTACTTGG+TGG	-	chr3.4:25727787-25727806	MS.gene77858:CDS	35.0%
	TTGGAGAATCTCTTAGTCTA+TGG	-	chr3.4:25728134-25728153	MS.gene77858:CDS	35.0%
	TTGGTAAAGTATGATGGCAA+TGG	-	chr3.4:25728325-25728344	MS.gene77858:CDS	35.0%
	TTTGCATCTAAATTGGAAGG+AGG	+	chr3.4:25727731-25727750	None:intergenic	35.0%
!	CATTTTGTAGAGCATATTGG+GGG	+	chr3.4:25728271-25728290	None:intergenic	35.0%
!	CCACATTTTGTAGAGCATAT+TGG	+	chr3.4:25728274-25728293	None:intergenic	35.0%
!	TTTAGTGGAAAGGGAACTTT+TGG	-	chr3.4:25728054-25728073	MS.gene77858:CDS	35.0%
!!	AAAGTAGGGACGCTTTTTAA+TGG	-	chr3.4:25727971-25727990	MS.gene77858:CDS	35.0%
!!	AAGTAGGGACGCTTTTTAAT+GGG	-	chr3.4:25727972-25727991	MS.gene77858:CDS	35.0%
!!	ACTGGATTGGTAAAGTATGA+TGG	-	chr3.4:25728319-25728338	MS.gene77858:CDS	35.0%
!!	ATTAAAAAGCGTCCCTACTT+TGG	+	chr3.4:25727972-25727991	None:intergenic	35.0%
!!	TGGCTTTGATTTAGTGGAAA+GGG	-	chr3.4:25728045-25728064	MS.gene77858:CDS	35.0%
!!	TTAAAAAGCGTCCCTACTTT+GGG	+	chr3.4:25727971-25727990	None:intergenic	35.0%
!!	TTGGCTTTGATTTAGTGGAA+AGG	-	chr3.4:25728044-25728063	MS.gene77858:CDS	35.0%
	AACCTATAGATTGCGACTTG+TGG	-	chr3.4:25728107-25728126	MS.gene77858:CDS	40.0%
	ACTCTGTATACATAGCCACT+AGG	+	chr3.4:25728396-25728415	None:intergenic	40.0%
	AGTCGCAATCTATAGGTTCA+TGG	+	chr3.4:25728105-25728124	None:intergenic	40.0%
	ATCCACAAGTCGCAATCTAT+AGG	+	chr3.4:25728112-25728131	None:intergenic	40.0%
	ATTGGAACAAATGGTGGTAC+TGG	-	chr3.4:25728301-25728320	MS.gene77858:CDS	40.0%
	CTCTGTATACATAGCCACTA+GGG	+	chr3.4:25728395-25728414	None:intergenic	40.0%
	GATTGCGACTTGTGGATATT+TGG	-	chr3.4:25728115-25728134	MS.gene77858:CDS	40.0%
	GCAAATGATGATCCCAAAGT+AGG	-	chr3.4:25727956-25727975	MS.gene77858:CDS	40.0%
	GGTTCATGGTCAAAACCATA+TGG	+	chr3.4:25728091-25728110	None:intergenic	40.0%
	TATTTGTTTGTGACGTCCAG+TGG	+	chr3.4:25727702-25727721	None:intergenic	40.0%
	TCTGTATACATAGCCACTAG+GGG	+	chr3.4:25728394-25728413	None:intergenic	40.0%
	TGAGTATACTTCACCAATCC+AGG	+	chr3.4:25727917-25727936	None:intergenic	40.0%
	TGCAAAGGCCATCAATAGAT+AGG	+	chr3.4:25728237-25728256	None:intergenic	40.0%
	TGGGTCTATACTCGTATCAT+AGG	+	chr3.4:25727822-25727841	None:intergenic	40.0%
!	AACAAATGGTGGTACTGGAT+TGG	-	chr3.4:25728306-25728325	MS.gene77858:CDS	40.0%
!	ATCTCTTAGTCTATGGGCTA+TGG	-	chr3.4:25728141-25728160	MS.gene77858:CDS	40.0%
!	TAAATTTGCTCACTGTCACC+AGG	+	chr3.4:25728433-25728452	None:intergenic	40.0%
!	TCTCTTAGTCTATGGGCTAT+GGG	-	chr3.4:25728142-25728161	MS.gene77858:CDS	40.0%
!	TTGGAGATGCCTTTTCCATA+TGG	-	chr3.4:25728073-25728092	MS.gene77858:CDS	40.0%
	CGAAATTGAGTGTCCTGGAT+TGG	-	chr3.4:25727901-25727920	MS.gene77858:CDS	45.0%
	GGGGATCATACTGAATGCAA+AGG	+	chr3.4:25728252-25728271	None:intergenic	45.0%
	TACCTATGGAATCCATCCAC+TGG	-	chr3.4:25727683-25727702	MS.gene77858:CDS	45.0%
	TGGAACGAAATTGAGTGTCC+TGG	-	chr3.4:25727896-25727915	MS.gene77858:CDS	45.0%
!	CTCTTAGTCTATGGGCTATG+GGG	-	chr3.4:25728143-25728162	MS.gene77858:CDS	45.0%
!	TCTTAGTCTATGGGCTATGG+GGG	-	chr3.4:25728144-25728163	MS.gene77858:CDS	45.0%
	GAGTCTCTGCTTTCACTTCC+TGG	-	chr3.4:25728412-25728431	MS.gene77858:CDS	50.0%
	TGTTTGTGACGTCCAGTGGA+TGG	+	chr3.4:25727698-25727717	None:intergenic	50.0%
!	GTCCAGTGGATGGATTCCAT+AGG	+	chr3.4:25727688-25727707	None:intergenic	50.0%
	ATAGCCACTAGGGGTCCACA+TGG	+	chr3.4:25728385-25728404	None:intergenic	55.0%
	CGATCCATGTGGACCCCTAG+TGG	-	chr3.4:25728378-25728397	MS.gene77858:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	25727512	25728453	25727512	ID=MS.gene77858
chr3.4	mRNA	25727512	25728453	25727512	ID=MS.gene77858.t1;Parent=MS.gene77858
chr3.4	exon	25727512	25728453	25727512	ID=MS.gene77858.t1.exon1;Parent=MS.gene77858.t1
chr3.4	CDS	25727512	25728453	25727512	ID=cds.MS.gene77858.t1;Parent=MS.gene77858.t1

Gene Sequence

>MS.gene77858

ATGTCAACTCCAGCTCTTGAAATTCGATCTATAGATTTTGAAGCATCGCTTAACGATGATTCTGCTTCTACTTCACTGAACCTTAATTTTACCCTTCCCGAATCTTATTCTAATCTTGAGATTAAAAGTTCATGTAGAGGATTTATAGTTTTGACTTATTCTTTAAACATCTACCTATGGAATCCATCCACTGGACGTCACAAACAAATACCTTTTCCTCCTTCCAATTTAGATGCAAAATATTTATGTTGTCTATATGGTTTTGGTTATGACCATTCAACAGATGATTACTTGGTGGTATCAGTGTCCTATGATACGAGTATAGACCCAATAAAAGATAATATTTCATCACATTTGAAGTTTTTTTCATTGAGAGCTAATACATGGAACGAAATTGAGTGTCCTGGATTGGTGAAGTATACTCATTTCCCTTATTATATGAATGCAAATGATGATCCCAAAGTAGGGACGCTTTTTAATGGGACTATTCATTGGTTCTCTTTTCGCCATGATTTTTTAATGGATGCTATTGTTGGCTTTGATTTAGTGGAAAGGGAACTTTTGGAGATGCCTTTTCCATATGGTTTTGACCATGAACCTATAGATTGCGACTTGTGGATATTTGGAGAATCTCTTAGTCTATGGGCTATGGGGGATGAAACAATTGAAATATGGGTTATGAAAGAATACAAAGTGCATTCATCTTGGACTAAGACTCATGTCCTATCTATTGATGGCCTTTGCATTCAGTATGATCCCCCAATATGCTCTACAAAATGTGGTCATATTATTGGAACAAATGGTGGTACTGGATTGGTAAAGTATGATGGCAATGGTCAGATGCTAGAGATTCGCTCATACTATAACGATCCATGTGGACCCCTAGTGGCTATGTATACAGAGTCTCTGCTTTCACTTCCTGGTGACAGTGAGCAAATTTAA

Protein sequence

>MS.gene77858.t1

MSTPALEIRSIDFEASLNDDSASTSLNLNFTLPESYSNLEIKSSCRGFIVLTYSLNIYLWNPSTGRHKQIPFPPSNLDAKYLCCLYGFGYDHSTDDYLVVSVSYDTSIDPIKDNISSHLKFFSLRANTWNEIECPGLVKYTHFPYYMNANDDPKVGTLFNGTIHWFSFRHDFLMDAIVGFDLVERELLEMPFPYGFDHEPIDCDLWIFGESLSLWAMGDETIEIWVMKEYKVHSSWTKTHVLSIDGLCIQYDPPICSTKCGHIIGTNGGTGLVKYDGNGQMLEIRSYYNDPCGPLVAMYTESLLSLPGDSEQI