AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58311


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58311.t1 MTR_8g433040 75.477 367 73 3 1 361 9 364 0.0 538
MS.gene58311.t1 MTR_8g032380 75.477 367 73 3 1 361 9 364 0.0 538
MS.gene58311.t1 MTR_8g032390 71.745 361 76 4 1 356 31 370 4.61e-175 491
MS.gene58311.t1 MTR_4g094365 57.534 365 144 5 5 361 3 364 3.69e-134 387
MS.gene58311.t1 MTR_8g433030 60.942 361 82 8 1 356 31 337 1.42e-132 382
MS.gene58311.t1 MTR_4g122850 59.270 356 127 11 21 361 12 364 2.41e-128 373
MS.gene58311.t1 MTR_3g103020 56.522 368 139 10 6 359 16 376 1.20e-127 371
MS.gene58311.t1 MTR_4g109270 55.525 362 142 11 10 359 8 362 3.84e-118 347
MS.gene58311.t1 MTR_3g034180 54.111 377 142 12 8 361 121 489 6.11e-117 348
MS.gene58311.t1 MTR_6g060650 55.795 371 138 11 9 359 7 371 5.64e-116 341
MS.gene58311.t1 MTR_4g117780 52.747 364 153 11 10 361 11 367 1.54e-114 337
MS.gene58311.t1 MTR_4g023080 53.911 358 147 9 8 359 7 352 5.73e-114 335
MS.gene58311.t1 MTR_4g021785 54.749 358 145 8 8 359 7 353 1.15e-113 335
MS.gene58311.t1 MTR_4g023090 52.846 369 149 9 9 356 15 379 5.89e-113 334
MS.gene58311.t1 MTR_3g034130 55.620 347 126 10 8 333 7 346 1.58e-111 330
MS.gene58311.t1 MTR_4g109280 54.098 366 146 12 5 359 3 357 8.61e-111 328
MS.gene58311.t1 MTR_4g117850 52.861 367 144 11 9 358 22 376 8.98e-111 328
MS.gene58311.t1 MTR_4g117770 53.552 366 149 11 9 361 10 367 4.17e-110 326
MS.gene58311.t1 MTR_4g117810 53.552 366 149 11 9 361 10 367 4.17e-110 326
MS.gene58311.t1 MTR_4g116330 52.547 373 153 13 1 357 12 376 4.89e-110 327
MS.gene58311.t1 MTR_3g034160 54.301 372 141 11 8 357 7 371 3.08e-109 324
MS.gene58311.t1 MTR_4g023070 50.933 375 150 10 10 359 3 368 4.76e-109 323
MS.gene58311.t1 MTR_4g117720 51.752 371 127 11 1 358 44 375 1.04e-108 323
MS.gene58311.t1 MTR_4g118380 55.367 354 125 9 9 334 7 355 8.73e-107 317
MS.gene58311.t1 MTR_4g023120 49.072 377 158 10 10 361 3 370 2.85e-104 311
MS.gene58311.t1 MTR_4g023380 49.614 389 148 10 3 361 9 379 9.96e-101 303
MS.gene58311.t1 MTR_4g023130 50.847 354 123 8 8 359 7 311 1.76e-100 300
MS.gene58311.t1 MTR_5g070130 50.943 371 153 13 9 357 10 373 7.50e-100 301
MS.gene58311.t1 MTR_5g097210 49.596 371 160 12 3 358 2 360 1.25e-97 295
MS.gene58311.t1 MTR_5g070080 47.938 388 162 13 1 356 1 380 3.02e-97 294
MS.gene58311.t1 MTR_1g055135 47.906 382 162 14 2 359 5 373 1.24e-96 292
MS.gene58311.t1 MTR_4g023190 49.593 369 164 10 1 359 1 357 1.09e-95 289
MS.gene58311.t1 MTR_4g023200 49.593 369 165 10 1 359 1 358 2.19e-94 286
MS.gene58311.t1 MTR_4g121580 47.541 366 145 11 3 351 4 339 1.90e-93 284
MS.gene58311.t1 MTR_4g023150 48.370 368 171 10 1 359 1 358 9.05e-93 281
MS.gene58311.t1 MTR_5g070088 45.220 387 171 12 4 356 1 380 3.18e-91 278
MS.gene58311.t1 MTR_4g023440 48.753 361 132 10 9 361 17 332 7.68e-88 268
MS.gene58311.t1 MTR_4g116330 46.381 373 137 13 1 357 12 337 1.94e-86 265
MS.gene58311.t1 MTR_1g055165 43.443 366 150 7 1 359 1 316 2.80e-83 256
MS.gene58311.t1 MTR_8g013010 54.851 268 105 7 5 263 49 309 3.83e-81 250
MS.gene58311.t1 MTR_4g117750 46.900 371 160 14 8 357 1 355 3.92e-78 248
MS.gene58311.t1 MTR_4g117750 57.273 110 44 2 254 360 373 482 1.85e-32 127
MS.gene58311.t1 MTR_4g117870 47.138 297 111 7 72 361 10 267 8.47e-76 235
MS.gene58311.t1 MTR_1g055195 49.306 288 111 12 86 357 206 474 4.08e-73 235
MS.gene58311.t1 MTR_4g118400 47.735 287 108 10 81 355 38 294 7.99e-69 218
MS.gene58311.t1 MTR_7g079370 43.188 345 170 13 39 361 16 356 6.02e-67 215
MS.gene58311.t1 MTR_4g116320 53.953 215 88 4 153 358 43 255 1.32e-63 203
MS.gene58311.t1 MTR_6g463430 55.102 196 79 5 170 361 12 202 5.03e-60 192
MS.gene58311.t1 MTR_7g079400 44.637 289 134 11 88 359 56 335 8.86e-60 196
MS.gene58311.t1 MTR_8g040935 53.769 199 83 5 169 359 9 206 2.10e-59 191
MS.gene58311.t1 MTR_4g116340 50.000 236 92 6 3 229 29 247 1.66e-58 190
MS.gene58311.t1 MTR_8g102520 37.057 367 168 13 6 359 4 320 6.18e-55 183
MS.gene58311.t1 MTR_4g118370 40.569 281 129 7 89 358 4 257 2.63e-53 177
MS.gene58311.t1 MTR_2g048580 36.096 374 184 16 1 356 1 337 7.17e-53 178
MS.gene58311.t1 MTR_1g055175 49.485 194 89 5 173 359 8 199 3.24e-51 169
MS.gene58311.t1 MTR_1g055250 46.667 210 100 7 146 347 47 252 1.25e-47 164
MS.gene58311.t1 MTR_4g117530 41.667 240 102 6 123 359 47 251 4.78e-46 158
MS.gene58311.t1 MTR_4g114700 39.382 259 96 7 106 352 9 218 1.22e-43 151
MS.gene58311.t1 MTR_4g117430 53.459 159 64 5 106 263 3 152 4.10e-43 147
MS.gene58311.t1 MTR_7g117720 45.192 208 90 6 1 201 1 191 9.62e-42 147
MS.gene58311.t1 MTR_7g117720 51.724 87 35 3 277 356 186 272 1.58e-13 70.5
MS.gene58311.t1 MTR_8g098830 40.513 195 103 7 167 355 28 215 5.72e-35 128
MS.gene58311.t1 MTR_7g079420 37.262 263 124 12 105 355 905 1138 4.67e-34 134
MS.gene58311.t1 MTR_4g118360 55.200 125 47 4 239 357 1 122 6.41e-32 117
MS.gene58311.t1 MTR_4g122860 40.838 191 78 5 179 361 157 320 6.78e-32 123
MS.gene58311.t1 MTR_4g122860 48.718 78 38 2 9 85 69 145 3.14e-11 64.3
MS.gene58311.t1 MTR_8g101580 29.640 361 226 12 10 353 45 394 7.15e-32 124
MS.gene58311.t1 MTR_5g023000 61.856 97 34 2 266 359 1 97 2.40e-31 114
MS.gene58311.t1 MTR_3g007330 32.459 305 160 10 10 293 48 327 3.83e-31 122
MS.gene58311.t1 MTR_2g021150 30.081 369 221 17 9 353 13 368 9.09e-31 120
MS.gene58311.t1 MTR_1g097490 29.132 357 225 12 10 353 49 390 3.09e-30 119
MS.gene58311.t1 MTR_3g009310 31.343 335 195 13 10 328 42 357 6.85e-30 118
MS.gene58311.t1 MTR_2g055970 30.295 373 212 14 8 353 209 560 1.60e-29 119
MS.gene58311.t1 MTR_1g094210 28.691 359 224 12 10 353 57 398 2.03e-29 117
MS.gene58311.t1 MTR_5g057790 31.475 305 170 12 10 294 46 331 2.32e-29 117
MS.gene58311.t1 MTR_5g057710 31.046 306 170 12 10 294 46 331 4.93e-29 116
MS.gene58311.t1 MTR_8g467140 32.237 304 178 12 6 294 28 318 6.68e-29 114
MS.gene58311.t1 MTR_4g107820 29.801 302 180 10 10 296 36 320 2.12e-28 114
MS.gene58311.t1 MTR_4g107780 29.801 302 180 10 10 296 36 320 2.12e-28 114
MS.gene58311.t1 MTR_3g013740 32.500 320 161 16 10 294 44 343 2.18e-28 114
MS.gene58311.t1 MTR_4g055060 30.295 373 215 15 10 353 30 386 2.47e-28 114
MS.gene58311.t1 MTR_1g094210 28.783 337 209 11 10 332 57 376 2.56e-28 114
MS.gene58311.t1 MTR_4g107820 29.801 302 180 10 10 296 36 320 3.28e-28 114
MS.gene58311.t1 MTR_4g107780 29.801 302 180 10 10 296 36 320 3.35e-28 114
MS.gene58311.t1 MTR_1g097560 28.571 364 214 14 10 353 36 373 6.06e-28 112
MS.gene58311.t1 MTR_4g109290 42.138 159 54 3 9 162 8 133 6.11e-28 108
MS.gene58311.t1 MTR_5g022420 29.795 292 183 11 9 294 26 301 6.55e-28 112
MS.gene58311.t1 MTR_3g007410 29.679 374 206 14 13 354 55 403 8.35e-28 113
MS.gene58311.t1 MTR_3g014540 32.154 311 178 12 10 301 29 325 1.14e-27 112
MS.gene58311.t1 MTR_4g030830 28.288 403 212 17 10 353 9 393 1.45e-27 112
MS.gene58311.t1 MTR_4g108820 30.068 296 154 9 9 296 41 291 1.86e-27 110
MS.gene58311.t1 MTR_2g029990 28.255 361 231 13 11 353 52 402 2.13e-27 112
MS.gene58311.t1 MTR_2g426020 27.763 389 228 18 10 357 6 382 7.68e-27 110
MS.gene58311.t1 MTR_2g021155 31.922 307 184 10 10 301 33 329 9.31e-27 112
MS.gene58311.t1 MTR_2g021155 27.948 229 128 10 98 304 688 901 4.40e-12 67.8
MS.gene58311.t1 MTR_3g007360 29.144 374 208 14 13 354 55 403 1.28e-26 109
MS.gene58311.t1 MTR_4g133170 25.706 354 219 14 10 338 4 338 1.69e-26 109
MS.gene58311.t1 MTR_2g046920 27.760 317 181 9 4 296 18 310 1.84e-26 108
MS.gene58311.t1 MTR_4g013180 28.042 378 221 15 8 342 9 378 1.99e-26 110
MS.gene58311.t1 MTR_2g028160 27.296 392 233 18 10 355 5 390 4.09e-26 108
MS.gene58311.t1 MTR_5g057690 31.879 298 168 13 10 294 46 321 4.79e-26 107
MS.gene58311.t1 MTR_5g069120 42.581 155 80 4 20 166 1 154 8.02e-26 102
MS.gene58311.t1 MTR_7g055930 27.990 418 221 17 10 353 13 424 8.15e-26 107
MS.gene58311.t1 MTR_1g097330 28.655 342 220 10 10 337 16 347 8.27e-26 107
MS.gene58311.t1 MTR_1g050542 26.579 380 220 12 5 353 53 404 1.18e-25 107
MS.gene58311.t1 MTR_3g006670 31.833 311 162 13 10 293 49 336 1.97e-25 106
MS.gene58311.t1 MTR_7g079450 43.056 144 66 5 223 359 1 135 2.32e-25 100
MS.gene58311.t1 MTR_7g055870 28.162 419 219 18 10 353 13 424 5.12e-25 105
MS.gene58311.t1 MTR_3g014570 31.833 311 161 13 10 293 29 315 8.01e-25 104
MS.gene58311.t1 MTR_2g024110 27.937 383 224 19 10 357 4 369 8.46e-25 104
MS.gene58311.t1 MTR_6g021880 31.438 299 168 13 21 294 31 317 1.12e-24 103
MS.gene58311.t1 MTR_3g083640 29.967 307 184 12 10 302 55 344 1.25e-24 103
MS.gene58311.t1 MTR_7g056820 27.913 369 208 18 10 337 7 358 2.14e-24 103
MS.gene58311.t1 MTR_0667s0010 26.513 347 219 10 10 328 6 344 2.64e-24 103
MS.gene58311.t1 MTR_7g070880 28.125 384 207 16 10 332 21 396 3.14e-24 103
MS.gene58311.t1 MTR_5g057020 30.847 295 170 11 10 294 46 316 3.30e-24 102
MS.gene58311.t1 MTR_3g013770 30.650 323 175 13 10 303 33 335 4.42e-24 102
MS.gene58311.t1 MTR_7g407070 30.097 309 180 13 10 289 32 333 4.58e-24 102
MS.gene58311.t1 MTR_2g046900 26.954 371 242 14 4 353 22 384 7.45e-24 101
MS.gene58311.t1 MTR_3g036430 28.425 292 165 11 10 294 20 274 8.30e-24 100
MS.gene58311.t1 MTR_2g028130 26.882 372 220 16 10 336 5 369 9.00e-24 101
MS.gene58311.t1 MTR_4g061340 29.073 313 170 10 10 293 26 315 9.20e-24 101
MS.gene58311.t1 MTR_3g007430 27.815 302 178 8 13 293 46 328 1.13e-23 101
MS.gene58311.t1 MTR_4g037465 30.851 376 190 22 10 336 21 375 1.25e-23 101
MS.gene58311.t1 MTR_6g034720 48.305 118 54 3 129 240 53 169 2.08e-23 97.1
MS.gene58311.t1 MTR_5g011200 30.667 300 183 13 10 294 17 306 2.09e-23 100
MS.gene58311.t1 MTR_7g070440 29.032 341 200 14 4 314 1 329 2.63e-23 100
MS.gene58311.t1 MTR_3g010390 27.812 320 190 13 10 299 33 341 2.78e-23 100
MS.gene58311.t1 MTR_7g070830 28.375 363 194 15 10 314 21 375 3.38e-23 100
MS.gene58311.t1 MTR_1g054575 28.763 299 191 10 5 294 47 332 4.09e-23 101
MS.gene58311.t1 MTR_0064s0160 27.778 396 229 16 9 359 41 424 6.32e-23 99.8
MS.gene58311.t1 MTR_2g031720 28.609 381 222 16 10 357 6 369 7.28e-23 99.0
MS.gene58311.t1 MTR_1g068835 27.759 299 190 9 10 293 4 291 7.50e-23 99.0
MS.gene58311.t1 MTR_3g036290 29.282 362 211 17 10 353 22 356 9.89e-23 98.2
MS.gene58311.t1 MTR_2g028110 27.249 378 231 16 10 359 4 365 2.69e-22 97.1
MS.gene58311.t1 MTR_2g046830 28.025 314 184 10 4 296 19 311 3.26e-22 97.1
MS.gene58311.t1 MTR_3g011060 29.573 328 174 13 10 302 28 333 3.34e-22 97.1
MS.gene58311.t1 MTR_3g464470 28.354 395 222 16 4 353 1 379 4.04e-22 96.7
MS.gene58311.t1 MTR_4g019990 26.683 401 219 14 9 352 5 387 5.16e-22 96.7
MS.gene58311.t1 MTR_7g060940 28.659 328 182 10 8 300 20 330 5.21e-22 96.7
MS.gene58311.t1 MTR_3g007270 28.931 318 186 14 10 301 47 350 5.39e-22 96.7
MS.gene58311.t1 MTR_3g464500 29.073 399 217 19 4 353 21 402 8.39e-22 95.9
MS.gene58311.t1 MTR_6g017280 26.142 394 238 17 4 353 3 387 9.41e-22 95.9
MS.gene58311.t1 MTR_0044s0300 28.013 307 175 13 10 294 38 320 1.04e-21 95.5
MS.gene58311.t1 MTR_3g436150 29.605 304 182 12 10 289 32 327 1.12e-21 95.5
MS.gene58311.t1 MTR_1g068860 27.759 299 192 9 10 293 4 293 1.17e-21 95.5
MS.gene58311.t1 MTR_3g009260 29.474 285 185 8 10 289 41 314 1.56e-21 95.1
MS.gene58311.t1 MTR_3g009240 29.097 299 171 11 10 289 36 312 1.68e-21 95.1
MS.gene58311.t1 MTR_1g068875 27.425 299 190 11 10 293 4 290 1.78e-21 94.7
MS.gene58311.t1 MTR_3g023930 30.822 292 169 12 10 294 34 299 2.03e-21 94.4
MS.gene58311.t1 MTR_5g069760 27.371 369 201 16 8 333 4 348 2.03e-21 94.7
MS.gene58311.t1 MTR_0128s0020 29.167 384 222 19 1 349 10 378 2.11e-21 94.7
MS.gene58311.t1 MTR_5g096710 28.389 391 218 17 10 353 23 398 2.62e-21 94.7
MS.gene58311.t1 MTR_2g426060 28.616 318 182 16 10 293 6 312 2.75e-21 94.7
MS.gene58311.t1 MTR_2g021190 27.869 305 184 11 10 294 21 309 2.91e-21 94.4
MS.gene58311.t1 MTR_6g053240 28.221 326 173 13 10 300 28 327 2.93e-21 94.4
MS.gene58311.t1 MTR_2g031640 26.133 375 235 15 10 357 6 365 2.97e-21 94.4
MS.gene58311.t1 MTR_1g115160 28.912 294 187 12 8 294 20 298 4.28e-21 93.6
MS.gene58311.t1 MTR_2g031680 26.578 301 190 9 10 293 6 292 5.45e-21 93.6
MS.gene58311.t1 MTR_1g055070 31.274 259 150 11 10 243 49 304 5.59e-21 93.6
MS.gene58311.t1 MTR_8g464770 28.084 381 226 15 9 355 11 377 6.50e-21 93.2
MS.gene58311.t1 MTR_4g031770 28.197 305 181 13 10 294 4 290 7.15e-21 92.8
MS.gene58311.t1 MTR_2g426070 27.244 312 193 9 11 293 7 313 7.32e-21 93.2
MS.gene58311.t1 MTR_2g021770 28.469 418 224 21 1 356 1 405 9.37e-21 93.2
MS.gene58311.t1 MTR_4g033495 26.196 397 227 17 10 356 27 407 1.04e-20 93.2
MS.gene58311.t1 MTR_2g047832 27.829 327 188 13 4 296 23 335 1.21e-20 92.8
MS.gene58311.t1 MTR_2g021800 26.485 404 233 14 9 354 15 412 1.21e-20 92.8
MS.gene58311.t1 MTR_8g073550 34.500 200 98 11 9 188 29 215 1.25e-20 89.7
MS.gene58311.t1 MTR_0115s0020 25.700 393 237 14 10 354 10 395 1.43e-20 92.4
MS.gene58311.t1 MTR_7g062100 27.577 388 222 18 10 353 24 396 1.72e-20 92.0
MS.gene58311.t1 MTR_1g056710 30.159 315 180 16 10 303 34 329 1.81e-20 92.0
MS.gene58311.t1 MTR_7g066100 27.475 404 224 16 6 355 7 395 1.83e-20 92.0
MS.gene58311.t1 MTR_2g426090 27.129 317 189 16 4 289 1 306 1.96e-20 92.0
MS.gene58311.t1 MTR_5g056020 27.317 410 226 19 10 353 17 420 1.97e-20 92.8
MS.gene58311.t1 MTR_3g083010 27.569 399 227 18 10 355 6 395 3.62e-20 91.3
MS.gene58311.t1 MTR_7g055977 25.806 403 225 18 4 354 1 381 3.78e-20 90.9
MS.gene58311.t1 MTR_3g024150 30.693 303 166 16 13 294 38 317 4.51e-20 90.9
MS.gene58311.t1 MTR_7g056760 27.401 354 197 15 8 314 21 361 5.09e-20 90.9
MS.gene58311.t1 MTR_0128s0070 27.577 388 222 16 10 352 22 395 6.26e-20 90.5
MS.gene58311.t1 MTR_1g088120 28.060 335 189 14 1 293 1 325 6.43e-20 90.5
MS.gene58311.t1 MTR_7g066000 27.926 376 208 18 8 336 23 382 6.94e-20 90.5
MS.gene58311.t1 MTR_3g010520 29.195 298 167 12 10 294 25 291 7.43e-20 90.1
MS.gene58311.t1 MTR_2g025420 24.876 402 229 15 10 353 6 392 8.02e-20 90.5
MS.gene58311.t1 MTR_7g013590 32.895 304 165 15 13 294 39 325 8.15e-20 90.5
MS.gene58311.t1 MTR_7g445890 24.615 390 225 16 10 353 16 382 8.43e-20 90.1
MS.gene58311.t1 MTR_4g129160 28.107 338 186 12 4 293 1 329 8.84e-20 89.7
MS.gene58311.t1 MTR_6g065980 29.514 288 174 13 10 289 16 282 9.10e-20 89.7
MS.gene58311.t1 MTR_3g010970 28.954 373 201 18 13 353 51 391 1.09e-19 89.7
MS.gene58311.t1 MTR_3g030250 27.869 305 170 13 10 294 37 311 1.21e-19 89.7
MS.gene58311.t1 MTR_0760s0010 30.584 291 172 13 15 294 52 323 1.53e-19 89.4
MS.gene58311.t1 MTR_2g078900 28.763 299 182 13 10 294 33 314 1.59e-19 89.0
MS.gene58311.t1 MTR_2g078850 30.565 301 171 15 13 294 33 314 1.65e-19 89.0
MS.gene58311.t1 MTR_6g090180 27.154 383 224 14 2 335 37 413 1.70e-19 89.7
MS.gene58311.t1 MTR_1g054725 26.357 387 213 14 9 353 19 375 2.30e-19 88.6
MS.gene58311.t1 MTR_5g007610 29.032 310 180 13 10 293 41 336 2.42e-19 89.0
MS.gene58311.t1 MTR_2g461450 27.551 294 187 9 10 293 18 295 2.75e-19 88.2
MS.gene58311.t1 MTR_0831s0010 24.235 392 240 14 3 354 43 417 3.03e-19 89.0
MS.gene58311.t1 MTR_4g129190 25.500 400 228 15 10 354 6 390 3.32e-19 88.6
MS.gene58311.t1 MTR_7g028660 28.267 329 184 12 8 300 9 321 3.45e-19 88.2
MS.gene58311.t1 MTR_6g016285 26.471 408 229 16 8 353 19 417 4.45e-19 88.6
MS.gene58311.t1 MTR_3g010920 26.796 362 223 14 10 353 44 381 5.48e-19 87.8
MS.gene58311.t1 MTR_6g007135 26.667 315 182 12 10 294 26 321 5.51e-19 87.8
MS.gene58311.t1 MTR_7g060960 27.619 315 165 11 8 299 30 304 6.55e-19 87.4
MS.gene58311.t1 MTR_3g024110 27.517 298 191 10 10 298 101 382 6.72e-19 87.8
MS.gene58311.t1 MTR_6g027910 28.158 380 217 20 13 353 12 374 7.28e-19 87.4
MS.gene58311.t1 MTR_7g056390 28.955 335 166 14 10 293 18 331 8.43e-19 87.4
MS.gene58311.t1 MTR_3g072470 29.573 328 172 15 10 293 19 331 8.64e-19 87.4
MS.gene58311.t1 MTR_2g104340 25.964 389 240 14 9 356 13 394 9.63e-19 87.0
MS.gene58311.t1 MTR_2g028140 24.924 329 190 12 10 293 5 321 1.04e-18 87.0
MS.gene58311.t1 MTR_3g010620 28.618 304 172 12 8 294 31 306 1.05e-18 87.0
MS.gene58311.t1 MTR_1g055375 27.704 379 217 19 13 353 7 366 1.09e-18 86.7
MS.gene58311.t1 MTR_3g006500 27.467 375 219 17 10 353 17 369 1.09e-18 86.7
MS.gene58311.t1 MTR_7g066850 25.436 401 229 17 10 356 23 407 1.29e-18 87.0
MS.gene58311.t1 MTR_3g010870 27.907 301 180 11 10 294 37 316 1.40e-18 86.7
MS.gene58311.t1 MTR_6g053260 28.076 317 180 12 10 300 337 631 1.61e-18 87.4
MS.gene58311.t1 MTR_7g056003 27.606 355 189 13 13 314 18 357 1.65e-18 86.7
MS.gene58311.t1 MTR_0649s0020 27.493 371 206 19 10 333 11 365 1.66e-18 86.3
MS.gene58311.t1 MTR_2g021210 28.041 296 184 13 10 294 84 361 1.82e-18 86.7
MS.gene58311.t1 MTR_4g070550 25.466 322 191 12 10 293 5 315 1.90e-18 86.3
MS.gene58311.t1 MTR_2g021050 27.564 312 167 15 10 293 5 285 2.17e-18 85.9
MS.gene58311.t1 MTR_6g092560 24.619 394 241 16 10 355 12 397 2.21e-18 86.3
MS.gene58311.t1 MTR_7g066030 26.904 394 236 15 6 354 17 403 2.33e-18 85.9
MS.gene58311.t1 MTR_7g061060 26.361 349 200 14 7 314 10 342 2.45e-18 85.9
MS.gene58311.t1 MTR_8g099460 27.010 311 186 12 10 293 5 301 2.69e-18 85.9
MS.gene58311.t1 MTR_7g007300 27.778 306 177 13 7 294 100 379 2.78e-18 86.3
MS.gene58311.t1 MTR_2g025960 27.473 273 151 15 103 336 5 269 2.90e-18 84.7
MS.gene58311.t1 MTR_3g036335 27.119 295 187 9 10 289 41 322 3.00e-18 85.5
MS.gene58311.t1 MTR_2g026010 26.159 302 197 10 10 293 4 297 3.26e-18 85.5
MS.gene58311.t1 MTR_3g011100 30.293 307 175 15 10 293 235 525 3.27e-18 86.3
MS.gene58311.t1 MTR_7g055830 25.000 396 199 15 10 356 13 359 3.74e-18 85.1
MS.gene58311.t1 MTR_2g043410 28.875 329 173 13 8 293 20 330 3.94e-18 85.5
MS.gene58311.t1 MTR_7g052670 24.510 408 244 17 8 353 19 424 4.66e-18 85.5
MS.gene58311.t1 MTR_5g037680 25.258 388 234 17 9 353 7 381 5.69e-18 85.1
MS.gene58311.t1 MTR_2g043400 26.185 401 218 18 8 349 21 402 5.76e-18 85.1
MS.gene58311.t1 MTR_5g046300 28.328 293 180 12 10 289 4 279 7.05e-18 84.0
MS.gene58311.t1 MTR_5g046290 28.328 293 180 12 10 289 4 279 7.05e-18 84.0
MS.gene58311.t1 MTR_4g030980 23.798 416 214 12 10 340 15 412 7.51e-18 84.7
MS.gene58311.t1 MTR_2g425980 27.110 391 229 19 10 357 5 382 7.57e-18 84.7
MS.gene58311.t1 MTR_5g069930 25.000 368 218 16 8 333 4 355 8.33e-18 84.3
MS.gene58311.t1 MTR_4g030110 25.193 389 210 16 1 338 21 379 1.02e-17 84.0
MS.gene58311.t1 MTR_5g069390 25.183 409 237 15 9 361 25 420 1.02e-17 84.7
MS.gene58311.t1 MTR_3g006570 28.205 312 171 12 10 294 21 306 1.09e-17 84.0
MS.gene58311.t1 MTR_1g061330 24.934 377 237 13 10 359 4 361 1.28e-17 84.0
MS.gene58311.t1 MTR_0464s0020 28.485 330 185 13 8 293 21 343 1.31e-17 84.0
MS.gene58311.t1 MTR_3g030240 27.907 301 170 13 10 294 40 309 1.57e-17 83.6
MS.gene58311.t1 MTR_2g021252 25.000 360 228 13 13 354 50 385 1.65e-17 83.6
MS.gene58311.t1 MTR_7g055987 27.485 342 177 17 13 312 23 335 1.67e-17 83.2
MS.gene58311.t1 MTR_4g023430 54.762 84 32 2 1 80 32 113 1.68e-17 80.9
MS.gene58311.t1 MTR_4g023430 43.269 104 53 2 264 361 119 222 2.58e-15 74.7
MS.gene58311.t1 MTR_4g080200 25.269 372 226 14 8 354 1 345 1.71e-17 83.2
MS.gene58311.t1 MTR_1g442850 27.368 380 201 18 9 335 4 361 1.83e-17 83.2
MS.gene58311.t1 MTR_3g010590 29.043 303 167 13 10 294 39 311 1.96e-17 83.2
MS.gene58311.t1 MTR_7g091630 24.090 357 220 14 3 314 25 375 2.13e-17 83.6
MS.gene58311.t1 MTR_7g067680 27.483 302 176 9 10 298 49 320 2.14e-17 83.2
MS.gene58311.t1 MTR_2g024100 27.187 320 195 12 12 302 9 319 2.19e-17 83.2
MS.gene58311.t1 MTR_3g030330 28.571 294 185 10 10 294 20 297 2.21e-17 82.8
MS.gene58311.t1 MTR_7g061050 27.187 320 182 11 7 293 10 311 2.42e-17 82.8
MS.gene58311.t1 MTR_5g057643 30.137 219 122 9 10 210 46 251 2.52e-17 81.3
MS.gene58311.t1 MTR_7g077970 27.950 322 192 11 10 293 7 326 2.79e-17 83.2
MS.gene58311.t1 MTR_5g046260 27.368 285 163 13 10 289 4 249 3.46e-17 81.3
MS.gene58311.t1 MTR_6g017305 27.341 267 158 12 120 353 18 281 3.63e-17 81.3
MS.gene58311.t1 MTR_7g062060 25.990 404 227 18 9 354 11 400 3.86e-17 82.4
MS.gene58311.t1 MTR_3g030350 25.410 366 241 13 10 353 35 390 3.88e-17 82.4
MS.gene58311.t1 MTR_6g055210 26.161 409 228 19 9 353 21 419 4.25e-17 82.4
MS.gene58311.t1 MTR_4g014370 24.205 409 238 17 9 356 10 407 5.03e-17 82.0
MS.gene58311.t1 MTR_2g047892 26.216 370 207 17 10 332 22 372 5.57e-17 82.0
MS.gene58311.t1 MTR_7g035295 23.342 377 207 15 10 336 16 360 5.73e-17 82.0
MS.gene58311.t1 MTR_4g117550 26.161 409 188 17 9 356 16 371 5.86e-17 81.6
MS.gene58311.t1 MTR_0128s0010 27.044 318 189 13 3 289 14 319 6.20e-17 81.6
MS.gene58311.t1 MTR_2g022000 24.878 410 243 15 9 361 15 416 6.23e-17 82.0
MS.gene58311.t1 MTR_6g004660 28.391 317 186 10 10 298 16 319 6.57e-17 81.6
MS.gene58311.t1 MTR_0054s0090 25.424 413 235 20 2 356 7 404 6.86e-17 81.6
MS.gene58311.t1 MTR_3g024040 29.371 286 174 12 17 293 38 304 7.83e-17 81.3
MS.gene58311.t1 MTR_5g048160 24.615 390 244 16 10 354 4 388 8.18e-17 81.3
MS.gene58311.t1 MTR_4g013175 24.818 411 230 17 1 342 1 401 8.69e-17 81.6
MS.gene58311.t1 MTR_2g437110 24.615 390 233 17 8 353 20 392 1.34e-16 81.3
MS.gene58311.t1 MTR_3g009250 30.769 208 133 5 13 216 44 244 1.79e-16 78.6
MS.gene58311.t1 MTR_7g056200 24.810 395 216 15 7 353 20 381 2.74e-16 79.7
MS.gene58311.t1 MTR_4g102410 25.553 407 244 17 1 356 50 448 2.76e-16 80.1
MS.gene58311.t1 MTR_4g006270 27.365 296 166 13 10 287 4 268 3.03e-16 79.7
MS.gene58311.t1 MTR_4g013185 24.390 410 237 15 1 344 1 403 3.97e-16 79.7
MS.gene58311.t1 MTR_3g007300 28.947 304 146 14 10 293 49 302 3.98e-16 79.3
MS.gene58311.t1 MTR_1g009110 27.123 365 222 17 2 337 7 356 5.14e-16 79.0
MS.gene58311.t1 MTR_7g078040 28.274 336 182 14 10 293 9 337 5.63e-16 79.3
MS.gene58311.t1 MTR_7g056710 26.823 384 220 19 9 352 17 379 6.07e-16 78.6
MS.gene58311.t1 MTR_0267s0050 26.196 397 224 18 13 358 9 387 7.14e-16 78.6
MS.gene58311.t1 MTR_4g030760 24.672 381 225 15 10 352 73 429 8.01e-16 78.6
MS.gene58311.t1 MTR_7g057270 27.673 318 191 13 10 293 26 338 8.03e-16 78.6
MS.gene58311.t1 MTR_3g010430 25.868 317 174 12 10 294 36 323 9.77e-16 78.2
MS.gene58311.t1 MTR_4g122840 39.259 135 45 4 230 361 164 264 1.02e-15 76.6
MS.gene58311.t1 MTR_7g056260 28.349 321 178 15 8 293 12 315 1.05e-15 77.4
MS.gene58311.t1 MTR_3g011650 29.808 208 136 5 13 216 82 283 1.20e-15 76.6
MS.gene58311.t1 MTR_5g023570 40.385 104 60 1 9 112 36 137 1.22e-15 73.6
MS.gene58311.t1 MTR_0242s0060 28.221 326 186 15 8 293 7 324 1.22e-15 78.2
MS.gene58311.t1 MTR_0242s0040 28.221 326 186 15 8 293 7 324 1.22e-15 78.2
MS.gene58311.t1 MTR_4g011660 23.659 410 236 16 10 353 19 417 1.24e-15 78.2
MS.gene58311.t1 MTR_7g050520 26.685 356 208 16 8 326 20 359 1.53e-15 77.8
MS.gene58311.t1 MTR_5g097680 24.362 431 240 17 1 356 6 425 1.60e-15 77.8
MS.gene58311.t1 MTR_0054s0100 25.121 414 237 19 2 356 7 406 1.94e-15 77.4
MS.gene58311.t1 MTR_1g007450 25.620 363 228 12 1 324 1 360 2.86e-15 77.0
MS.gene58311.t1 MTR_1g007410 24.855 346 189 12 9 300 21 349 3.08e-15 76.6
MS.gene58311.t1 MTR_8g063440 24.129 402 234 16 1 354 1 379 3.28e-15 76.6
MS.gene58311.t1 MTR_7g078840 25.926 351 194 15 1 293 1 343 3.32e-15 77.0
MS.gene58311.t1 MTR_5g096630 22.353 425 242 12 1 356 7 412 3.52e-15 76.6
MS.gene58311.t1 MTR_7g079640 25.936 374 224 14 9 349 12 365 3.69e-15 76.3
MS.gene58311.t1 MTR_3g437520 27.003 337 184 14 8 293 21 346 4.64e-15 76.6
MS.gene58311.t1 MTR_7g066010 24.552 391 216 14 6 354 17 370 4.84e-15 75.9
MS.gene58311.t1 MTR_4g024890 22.597 385 249 11 9 353 9 384 4.98e-15 75.9
MS.gene58311.t1 MTR_7g061010 27.979 386 218 16 8 352 20 386 5.06e-15 75.9
MS.gene58311.t1 MTR_4g030090 25.806 310 192 10 10 289 14 315 5.46e-15 75.9
MS.gene58311.t1 MTR_7g077990 26.959 319 171 13 10 289 17 312 6.69e-15 75.9
MS.gene58311.t1 MTR_7g050480 25.978 358 208 16 8 326 20 359 9.40e-15 75.1
MS.gene58311.t1 MTR_2g021950 22.396 384 255 10 9 354 15 393 1.07e-14 75.1
MS.gene58311.t1 MTR_3g023940 26.287 369 228 15 10 353 34 383 1.12e-14 75.1
MS.gene58311.t1 MTR_7g079160 25.672 409 216 17 8 338 6 404 1.19e-14 75.5
MS.gene58311.t1 MTR_5g059430 24.079 407 243 18 9 356 25 424 1.31e-14 75.1
MS.gene58311.t1 MTR_3g024130 26.117 291 165 13 83 338 27 302 1.44e-14 73.9
MS.gene58311.t1 MTR_8g064890 24.112 394 231 17 9 356 15 386 1.46e-14 74.7
MS.gene58311.t1 MTR_5g057040 32.558 172 88 8 10 164 46 206 1.64e-14 75.5
MS.gene58311.t1 MTR_3g030310 27.097 310 182 12 10 294 21 311 1.83e-14 74.3
MS.gene58311.t1 MTR_7g066060 23.291 395 243 17 9 353 22 406 1.91e-14 74.7
MS.gene58311.t1 MTR_5g097330 24.877 406 242 16 1 354 5 399 1.95e-14 74.3
MS.gene58311.t1 MTR_1g015740 24.217 351 196 13 10 345 8 303 2.30e-14 73.6
MS.gene58311.t1 MTR_1g055055 26.578 301 175 11 10 295 26 295 2.35e-14 73.6
MS.gene58311.t1 MTR_7g017040 23.333 390 245 14 9 354 15 394 2.43e-14 73.9
MS.gene58311.t1 MTR_8g046310 24.219 384 223 15 13 355 19 375 3.06e-14 73.6
MS.gene58311.t1 MTR_0097s0030 24.734 376 211 18 10 340 14 362 3.20e-14 73.6
MS.gene58311.t1 MTR_2g047240 24.734 376 211 18 10 340 14 362 3.20e-14 73.6
MS.gene58311.t1 MTR_4g030790 25.828 302 160 9 10 289 19 278 3.24e-14 73.2
MS.gene58311.t1 MTR_5g092850 23.704 405 229 18 9 354 15 398 3.28e-14 73.6
MS.gene58311.t1 MTR_7g022600 26.161 409 227 18 10 353 23 421 3.35e-14 73.9
MS.gene58311.t1 MTR_7g056737 27.508 309 189 12 8 293 20 316 6.96e-14 72.8
MS.gene58311.t1 MTR_2g047200 25.714 385 234 19 10 353 20 393 7.32e-14 72.4
MS.gene58311.t1 MTR_1g023400 25.410 366 229 18 13 354 6 351 7.56e-14 72.4
MS.gene58311.t1 MTR_1g055200 52.055 73 28 2 102 173 5 71 8.45e-14 67.4
MS.gene58311.t1 MTR_7g091640 25.926 324 198 17 3 293 28 342 9.63e-14 72.0
MS.gene58311.t1 MTR_1g071010 25.260 384 233 17 11 353 16 386 1.17e-13 72.0
MS.gene58311.t1 MTR_5g009060 29.290 338 165 15 10 293 25 342 1.24e-13 72.0
MS.gene58311.t1 MTR_0129s0070 24.490 392 229 14 12 354 19 392 1.36e-13 71.6
MS.gene58311.t1 MTR_5g096900 27.740 292 161 10 9 263 11 289 1.59e-13 70.9
MS.gene58311.t1 MTR_2g010950 24.722 360 224 12 10 331 20 370 1.59e-13 71.6
MS.gene58311.t1 MTR_6g048140 27.914 326 170 15 10 300 39 334 1.72e-13 71.6
MS.gene58311.t1 MTR_3g058470 28.289 304 163 13 10 294 37 304 1.90e-13 71.2
MS.gene58311.t1 MTR_5g008530 57.895 57 22 1 8 62 16 72 2.07e-13 65.1
MS.gene58311.t1 MTR_3g096250 30.068 296 146 13 10 294 47 292 2.25e-13 70.9
MS.gene58311.t1 MTR_6g478230 22.980 396 241 17 9 356 26 405 2.49e-13 71.2
MS.gene58311.t1 MTR_8g066440 26.364 330 180 14 11 293 24 337 2.55e-13 70.9
MS.gene58311.t1 MTR_3g058440 30.603 232 121 9 10 215 35 252 2.83e-13 70.1
MS.gene58311.t1 MTR_7g066840 25.307 407 225 20 5 356 18 400 3.97e-13 70.5
MS.gene58311.t1 MTR_7g052150 26.349 315 192 12 10 297 22 323 4.00e-13 70.5
MS.gene58311.t1 MTR_8g013005 59.649 57 21 1 305 359 1 57 4.48e-13 63.9
MS.gene58311.t1 MTR_7g077070 26.036 338 192 15 10 297 16 345 5.59e-13 70.1
MS.gene58311.t1 MTR_2g104280 23.951 405 253 13 1 356 5 403 6.91e-13 69.7
MS.gene58311.t1 MTR_7g056717 27.513 378 216 19 15 353 27 385 7.59e-13 69.3
MS.gene58311.t1 MTR_7g056797 26.266 316 186 13 8 287 21 325 7.80e-13 69.7
MS.gene58311.t1 MTR_1g037540 25.954 393 211 21 10 339 5 380 8.30e-13 69.3
MS.gene58311.t1 MTR_0627s0010 25.414 362 200 14 10 314 38 386 8.57e-13 69.3
MS.gene58311.t1 MTR_1g097370 28.395 162 105 4 149 302 135 293 1.05e-12 69.3
MS.gene58311.t1 MTR_4g028510 24.938 405 226 20 10 356 16 400 1.13e-12 69.3
MS.gene58311.t1 MTR_5g097820 27.126 247 145 8 2 217 15 257 1.19e-12 67.8
MS.gene58311.t1 MTR_5g068040 25.641 312 184 9 8 293 14 303 1.21e-12 68.9
MS.gene58311.t1 MTR_4g028660 24.103 390 243 15 9 354 15 395 1.47e-12 68.6
MS.gene58311.t1 MTR_4g027450 24.103 390 243 15 9 354 15 395 1.47e-12 68.6
MS.gene58311.t1 MTR_6g017270 28.283 198 120 8 10 188 9 203 1.79e-12 68.2
MS.gene58311.t1 MTR_7g009265 24.845 322 186 15 84 354 8 324 1.92e-12 67.8
MS.gene58311.t1 MTR_4g028750 26.048 334 194 14 1 289 4 329 3.24e-12 67.8
MS.gene58311.t1 MTR_3g058480 29.008 262 149 13 10 247 39 287 3.83e-12 67.0
MS.gene58311.t1 MTR_5g064700 22.472 356 215 16 56 356 17 366 4.10e-12 67.0
MS.gene58311.t1 MTR_5g056990 30.818 159 97 4 140 294 27 176 5.05e-12 65.5
MS.gene58311.t1 MTR_6g017295 25.540 278 152 13 85 314 19 289 5.42e-12 67.4
MS.gene58311.t1 MTR_1g112930 28.428 299 182 15 10 294 25 305 6.02e-12 66.6
MS.gene58311.t1 MTR_6g013270 26.198 313 191 13 5 294 24 319 7.26e-12 66.6
MS.gene58311.t1 MTR_7g445750 25.079 315 194 9 8 284 21 331 9.14e-12 65.9
MS.gene58311.t1 MTR_3g096280 27.304 293 155 14 22 293 17 272 1.04e-11 65.9
MS.gene58311.t1 MTR_2g033410 25.723 346 199 16 1 316 1 318 1.16e-11 65.9
MS.gene58311.t1 MTR_8g467670 24.352 386 223 16 9 351 13 372 1.28e-11 65.9
MS.gene58311.t1 MTR_2g046860 26.699 206 140 7 97 296 3 203 1.53e-11 65.1
MS.gene58311.t1 MTR_6g046320 25.507 345 181 15 10 289 39 372 1.97e-11 65.5
MS.gene58311.t1 MTR_2g078870 28.977 176 109 8 119 294 78 237 2.41e-11 64.3
MS.gene58311.t1 MTR_7g050490 30.769 195 108 8 8 187 6 188 2.56e-11 62.4
MS.gene58311.t1 MTR_3g030320 27.273 176 119 4 119 294 62 228 2.57e-11 64.3
MS.gene58311.t1 MTR_6g048120 23.585 318 188 10 10 294 36 331 2.81e-11 64.7
MS.gene58311.t1 MTR_4g028680 24.812 399 234 18 9 356 15 398 4.08e-11 64.3
MS.gene58311.t1 MTR_1g112010 23.794 311 196 10 36 326 6 295 5.77e-11 63.5
MS.gene58311.t1 MTR_7g069550 23.797 395 230 17 10 350 14 391 9.74e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58311.t1 AT3G06240 28.788 396 226 15 6 353 32 419 4.76e-29 117
MS.gene58311.t1 AT3G23880 27.697 343 213 14 10 334 14 339 6.30e-24 101
MS.gene58311.t1 AT4G12560 27.457 346 207 14 10 327 4 333 2.23e-20 92.0
MS.gene58311.t1 AT4G12560 27.457 346 207 14 10 327 4 333 2.23e-20 92.0
MS.gene58311.t1 AT4G12560 27.457 346 207 14 10 327 4 333 2.23e-20 92.0
MS.gene58311.t1 AT5G49610 29.003 331 183 16 5 308 3 308 7.63e-20 90.1
MS.gene58311.t1 AT3G10430 29.137 278 150 13 10 267 5 255 1.76e-16 80.1
MS.gene58311.t1 AT3G16590 28.472 288 173 12 10 279 5 277 4.37e-15 76.3
MS.gene58311.t1 AT3G07870 25.321 312 194 10 10 293 28 328 5.23e-15 76.3
MS.gene58311.t1 AT4G21240 24.359 312 202 9 10 305 36 329 3.83e-13 70.5
MS.gene58311.t1 AT4G04690 28.311 219 127 9 10 216 11 211 4.97e-13 70.1
MS.gene58311.t1 AT1G12870 22.680 388 238 18 10 351 33 404 5.59e-13 70.1
MS.gene58311.t1 AT1G33530 24.749 299 179 13 10 290 97 367 6.82e-13 70.1
MS.gene58311.t1 AT3G08750 29.167 240 139 13 10 239 12 230 1.38e-12 68.6
MS.gene58311.t1 AT4G19940 24.576 354 211 13 10 326 35 369 3.78e-12 67.4
MS.gene58311.t1 AT3G22650 23.473 311 186 15 6 289 5 290 6.03e-12 66.6
MS.gene58311.t1 AT3G22650 22.981 322 181 16 6 300 5 286 9.19e-12 66.2
MS.gene58311.t1 AT1G13200 22.000 400 247 17 10 353 43 433 2.48e-11 65.1
MS.gene58311.t1 AT3G17490 24.000 300 188 12 9 288 5 284 3.64e-11 64.3
MS.gene58311.t1 AT1G30790 25.000 328 196 12 3 297 2 312 4.40e-11 64.3
MS.gene58311.t1 AT1G32420 26.481 287 168 13 10 280 37 296 4.42e-11 63.5
MS.gene58311.t1 AT2G27520 23.432 303 186 12 7 296 3 272 9.90e-11 62.8

Find 85 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTGCCTTTGATTTAA+TGG 0.094561 8.2:-65596809 MS.gene58311:CDS
TACCATCTTTATGAAATTAA+AGG 0.194448 8.2:-65597198 MS.gene58311:CDS
ATAATCCGGCACTTGAAATA+TGG 0.213121 8.2:-65596678 MS.gene58311:CDS
GGCCATAGTCCTGTGTATTA+TGG 0.224581 8.2:-65596748 MS.gene58311:CDS
ATTCCTCTTCCGGATGATTT+TGG 0.227499 8.2:-65596769 MS.gene58311:CDS
TATTATGGTTTGTGGGTATT+TGG 0.243259 8.2:-65596733 MS.gene58311:CDS
CGATGTCAGCTATATGGTTT+TGG 0.284001 8.2:-65597054 MS.gene58311:CDS
TCGATGGTATGCATGTAATT+TGG 0.287079 8.2:+65597074 None:intergenic
GAAATACCTTTGTCCCCTTA+TGG 0.287603 8.2:-65597099 MS.gene58311:CDS
TTGGAGAATTTCTCAGTCTA+TGG 0.288501 8.2:-65596714 MS.gene58311:CDS
AAAGCAGGATCATTCTTTAA+TGG 0.306904 8.2:-65596880 MS.gene58311:CDS
TGAAACAGAATCATGGTTAA+TGG 0.320662 8.2:+65597251 None:intergenic
AAGCAGGATCATTCTTTAAT+GGG 0.325296 8.2:-65596879 MS.gene58311:CDS
TCAAGAACTCCACCTCTTGA+TGG 0.326957 8.2:-65597300 MS.gene58311:CDS
TACCATCGATGTCAGCTATA+TGG 0.341904 8.2:-65597060 MS.gene58311:CDS
AACCTTTAATTTCATAAAGA+TGG 0.347582 8.2:+65597196 None:intergenic
TTCTCATTATCATAGTTTAC+CGG 0.368207 8.2:-65596839 MS.gene58311:CDS
ACTGTTAGAGATTCCTCTTC+CGG 0.377602 8.2:-65596779 MS.gene58311:CDS
TCTTTAATGGGGCTATTCAT+TGG 0.381874 8.2:-65596867 MS.gene58311:CDS
TAACCATGATTCTGTTTCAC+TGG 0.404123 8.2:-65597247 MS.gene58311:CDS
TGAAATTAACACAATTCTTA+CGG 0.408426 8.2:+65597320 None:intergenic
AACCATAATACACAGGACTA+TGG 0.421661 8.2:+65596746 None:intergenic
TAATGGGGCTATTCATTGGT+TGG 0.427301 8.2:-65596863 MS.gene58311:CDS
ACCTCGCTGGCAACCTCAGC+AGG 0.429055 8.2:+65597430 None:intergenic
GTCCTGTGTATTATGGTTTG+TGG 0.436268 8.2:-65596741 MS.gene58311:CDS
GCATGTAATTTGGAACCATA+AGG 0.442244 8.2:+65597084 None:intergenic
AATACAAACTGCAATCATCT+TGG 0.444562 8.2:-65596645 MS.gene58311:CDS
TTCATAAAGATGGTAATGTC+GGG 0.448056 8.2:+65597206 None:intergenic
TAATCCGGCACTTGAAATAT+GGG 0.454488 8.2:-65596677 MS.gene58311:CDS
ATTGGAACTGATGGTGGTAA+TGG 0.460060 8.2:-65596544 MS.gene58311:CDS
TCCTGTGTATTATGGTTTGT+GGG 0.461492 8.2:-65596740 MS.gene58311:CDS
GAGTCTCTGCTTTCACTCCC+TGG 0.464650 8.2:-65596439 MS.gene58311:CDS
CATGTAATTTGGAACCATAA+GGG 0.467753 8.2:+65597085 None:intergenic
TCAAATTCGTTTGTAAGTCA+TGG 0.470890 8.2:-65597395 MS.gene58311:CDS
ATCGCCCATATTTCAAGTGC+CGG 0.478471 8.2:+65596673 None:intergenic
TTTCCTTTCCATTAAATCAA+AGG 0.478785 8.2:+65596801 None:intergenic
TTTCATAAAGATGGTAATGT+CGG 0.482897 8.2:+65597205 None:intergenic
TTGGTGAAGTATAATAATAA+AGG 0.488795 8.2:-65596520 MS.gene58311:CDS
TGATGACACAGATGGACAAA+AGG 0.498002 8.2:+65596990 None:intergenic
CCGGTCAAGAGATGATTACT+TGG 0.500070 8.2:-65597025 MS.gene58311:CDS
TATTTCTTTGTGAAATCTAG+TGG 0.503633 8.2:+65597116 None:intergenic
TCCTGCTTTGCGATAAGTCC+TGG 0.509102 8.2:+65596894 None:intergenic
ACATCACTTATTTGAATGCC+AGG 0.517766 8.2:-65596912 MS.gene58311:CDS
GCCAGGACTTATCGCAAAGC+AGG 0.519042 8.2:-65596895 MS.gene58311:CDS
AAATTAAAGGTTCATGCAGA+GGG 0.521334 8.2:-65597185 MS.gene58311:CDS
GTATCTCAAAATGAATCTAA+AGG 0.527253 8.2:-65596485 MS.gene58311:CDS
TCTTTGTGAAATCTAGTGGA+TGG 0.529306 8.2:+65597120 None:intergenic
TTGCCTTTGATTTAATGGAA+AGG 0.533360 8.2:-65596804 MS.gene58311:CDS
AATACGTGGAATAAAATTGA+AGG 0.536872 8.2:-65596940 MS.gene58311:CDS
TAAACTACCTCACGATCACC+AGG 0.539411 8.2:+65596421 None:intergenic
GTCAAGAGATGATTACTTGG+TGG 0.541832 8.2:-65597022 MS.gene58311:CDS
GGACTATGGCCAAAATCATC+CGG 0.543478 8.2:+65596760 None:intergenic
GTTGGAGAAACCTCTACGTA+TGG 0.549046 8.2:-65597146 MS.gene58311:CDS
TGGCCAAAATCATCCGGAAG+AGG 0.557422 8.2:+65596766 None:intergenic
TCTAAATATGATGACACAGA+TGG 0.560379 8.2:+65596982 None:intergenic
GAAATTAAAGGTTCATGCAG+AGG 0.568478 8.2:-65597186 MS.gene58311:CDS
TCCTGCTGAGGTTGCCAGCG+AGG 0.573172 8.2:-65597431 MS.gene58311:CDS
ATGTAATTTGGAACCATAAG+GGG 0.575504 8.2:+65597086 None:intergenic
GGTGATATTATTGGAACTGA+TGG 0.578976 8.2:-65596553 MS.gene58311:CDS
GGTCCAGTGAAACAGAATCA+TGG 0.582670 8.2:+65597244 None:intergenic
CCAAGTAATCATCTCTTGAC+CGG 0.585969 8.2:+65597025 None:intergenic
AACTGATGGTGGTAATGGAT+TGG 0.587821 8.2:-65596539 MS.gene58311:CDS
GATATTATTGGAACTGATGG+TGG 0.590443 8.2:-65596550 MS.gene58311:CDS
ATTTGAATGATTAACTCAGA+AGG 0.590960 8.2:+65597453 None:intergenic
GAATCTAAAGGCATCTGAAG+TGG 0.593932 8.2:-65596473 MS.gene58311:CDS
AAGCAGAGACTCTTTATACA+TGG 0.605588 8.2:+65596450 None:intergenic
AGCAGGATCATTCTTTAATG+GGG 0.611074 8.2:-65596878 MS.gene58311:CDS
TTGGAACCATAAGGGGACAA+AGG 0.616353 8.2:+65597093 None:intergenic
TTCACTCCCTGGTGATCGTG+AGG 0.617534 8.2:-65596428 MS.gene58311:CDS
AAGGCAACAATAACTTCCAC+CGG 0.621007 8.2:+65596820 None:intergenic
TAATCATTCAAATCCTGCTG+AGG 0.622857 8.2:-65597443 MS.gene58311:CDS
AACCATATAGCTGACATCGA+TGG 0.633533 8.2:+65597058 None:intergenic
TCATTATCATAGTTTACCGG+TGG 0.635787 8.2:-65596836 MS.gene58311:CDS
AAATGTAAAAGAGACCTCGC+TGG 0.641330 8.2:+65597417 None:intergenic
ACCCACAAACCATAATACAC+AGG 0.646047 8.2:+65596739 None:intergenic
TCATAAAGATGGTAATGTCG+GGG 0.646720 8.2:+65597207 None:intergenic
ATAGAGCGAATTCCATCAAG+AGG 0.648628 8.2:+65597288 None:intergenic
AATTAACACAATTCTTACGG+CGG 0.650869 8.2:+65597323 None:intergenic
GAGCGAATTCCATCAAGAGG+TGG 0.656789 8.2:+65597291 None:intergenic
GCATTCAAATAAGTGATGTG+TGG 0.669083 8.2:+65596916 None:intergenic
TGGATGGATTCCATACGTAG+AGG 0.669122 8.2:+65597136 None:intergenic
TCTCGATGAGAGATAATACG+TGG 0.669859 8.2:-65596954 MS.gene58311:CDS
ACATGCGAATTTGCAAAGTG+AGG 0.671122 8.2:+65597354 None:intergenic
AGTATAATAATAAAGGACAA+CGG 0.711600 8.2:-65596513 MS.gene58311:CDS
AAACTACCTCACGATCACCA+GGG 0.735207 8.2:+65596422 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTATAATAATAAAGGACAA+CGG - chr8.2:65597390-65597409 MS.gene58311:CDS 20.0%
!! TACCATCTTTATGAAATTAA+AGG - chr8.2:65596705-65596724 MS.gene58311:CDS 20.0%
!! TGAAATTAACACAATTCTTA+CGG + chr8.2:65596586-65596605 None:intergenic 20.0%
!! TTGGTGAAGTATAATAATAA+AGG - chr8.2:65597383-65597402 MS.gene58311:CDS 20.0%
!!! AACCTTTAATTTCATAAAGA+TGG + chr8.2:65596710-65596729 None:intergenic 20.0%
!!! GAATATGAATTTTCATAATC+CGG - chr8.2:65597211-65597230 MS.gene58311:CDS 20.0%
! AATACGTGGAATAAAATTGA+AGG - chr8.2:65596963-65596982 MS.gene58311:CDS 25.0%
! ACAAAAAGTGGTGATATTAT+TGG - chr8.2:65597341-65597360 MS.gene58311:CDS 25.0%
! ATTTGAATGATTAACTCAGA+AGG + chr8.2:65596453-65596472 None:intergenic 25.0%
! GTATCTCAAAATGAATCTAA+AGG - chr8.2:65597418-65597437 MS.gene58311:CDS 25.0%
! TATTTCTTTGTGAAATCTAG+TGG + chr8.2:65596790-65596809 None:intergenic 25.0%
! TTCTCATTATCATAGTTTAC+CGG - chr8.2:65597064-65597083 MS.gene58311:CDS 25.0%
! TTTCCTTTCCATTAAATCAA+AGG + chr8.2:65597105-65597124 None:intergenic 25.0%
!! TATTGTTGCCTTTGATTTAA+TGG - chr8.2:65597094-65597113 MS.gene58311:CDS 25.0%
!! TTTCATAAAGATGGTAATGT+CGG + chr8.2:65596701-65596720 None:intergenic 25.0%
AAAGCAGGATCATTCTTTAA+TGG - chr8.2:65597023-65597042 MS.gene58311:CDS 30.0%
AAATTAAAGGTTCATGCAGA+GGG - chr8.2:65596718-65596737 MS.gene58311:CDS 30.0%
AAGCAGGATCATTCTTTAAT+GGG - chr8.2:65597024-65597043 MS.gene58311:CDS 30.0%
AATACAAACTGCAATCATCT+TGG - chr8.2:65597258-65597277 MS.gene58311:CDS 30.0%
AATTAACACAATTCTTACGG+CGG + chr8.2:65596583-65596602 None:intergenic 30.0%
TCAAATTCGTTTGTAAGTCA+TGG - chr8.2:65596508-65596527 MS.gene58311:CDS 30.0%
TCTAAATATGATGACACAGA+TGG + chr8.2:65596924-65596943 None:intergenic 30.0%
TGAAACAGAATCATGGTTAA+TGG + chr8.2:65596655-65596674 None:intergenic 30.0%
! ATGTAATTTGGAACCATAAG+GGG + chr8.2:65596820-65596839 None:intergenic 30.0%
! CATGTAATTTGGAACCATAA+GGG + chr8.2:65596821-65596840 None:intergenic 30.0%
! TATTATGGTTTGTGGGTATT+TGG - chr8.2:65597170-65597189 MS.gene58311:CDS 30.0%
! TTCATAAAGATGGTAATGTC+GGG + chr8.2:65596700-65596719 None:intergenic 30.0%
! TTGCCTTTGATTTAATGGAA+AGG - chr8.2:65597099-65597118 MS.gene58311:CDS 30.0%
!! CACTTTTTGTAGAGCATATA+GGG + chr8.2:65597331-65597350 None:intergenic 30.0%
!! CTAGGTTTTTCAATGTCAAT+AGG + chr8.2:65597302-65597321 None:intergenic 30.0%
!! GGTTTATATTTTTGCACTGT+TGG - chr8.2:65596739-65596758 MS.gene58311:CDS 30.0%
!!! TATATGGTTTTGGTTATGAC+CGG - chr8.2:65596859-65596878 MS.gene58311:CDS 30.0%
AACCATAATACACAGGACTA+TGG + chr8.2:65597160-65597179 None:intergenic 35.0%
AAGCAGAGACTCTTTATACA+TGG + chr8.2:65597456-65597475 None:intergenic 35.0%
ACATCACTTATTTGAATGCC+AGG - chr8.2:65596991-65597010 MS.gene58311:CDS 35.0%
AGCAGGATCATTCTTTAATG+GGG - chr8.2:65597025-65597044 MS.gene58311:CDS 35.0%
ATAATCCGGCACTTGAAATA+TGG - chr8.2:65597225-65597244 MS.gene58311:CDS 35.0%
CCTATATGCTCTACAAAAAG+TGG - chr8.2:65597329-65597348 MS.gene58311:CDS 35.0%
GAAATTAAAGGTTCATGCAG+AGG - chr8.2:65596717-65596736 MS.gene58311:CDS 35.0%
GAGCATATAGGGAAAAATCT+AGG + chr8.2:65597320-65597339 None:intergenic 35.0%
GATATTATTGGAACTGATGG+TGG - chr8.2:65597353-65597372 MS.gene58311:CDS 35.0%
GCATTCAAATAAGTGATGTG+TGG + chr8.2:65596990-65597009 None:intergenic 35.0%
GGTGATATTATTGGAACTGA+TGG - chr8.2:65597350-65597369 MS.gene58311:CDS 35.0%
TAACCATGATTCTGTTTCAC+TGG - chr8.2:65596656-65596675 MS.gene58311:CDS 35.0%
TAATCATTCAAATCCTGCTG+AGG - chr8.2:65596460-65596479 MS.gene58311:CDS 35.0%
TAATCCGGCACTTGAAATAT+GGG - chr8.2:65597226-65597245 MS.gene58311:CDS 35.0%
TCATTATCATAGTTTACCGG+TGG - chr8.2:65597067-65597086 MS.gene58311:CDS 35.0%
TCGATGGTATGCATGTAATT+TGG + chr8.2:65596832-65596851 None:intergenic 35.0%
TCTTTAATGGGGCTATTCAT+TGG - chr8.2:65597036-65597055 MS.gene58311:CDS 35.0%
TCTTTGTGAAATCTAGTGGA+TGG + chr8.2:65596786-65596805 None:intergenic 35.0%
TTGGAGAATTTCTCAGTCTA+TGG - chr8.2:65597189-65597208 MS.gene58311:CDS 35.0%
! GCATGTAATTTGGAACCATA+AGG + chr8.2:65596822-65596841 None:intergenic 35.0%
! TCATAAAGATGGTAATGTCG+GGG + chr8.2:65596699-65596718 None:intergenic 35.0%
! TCCTGTGTATTATGGTTTGT+GGG - chr8.2:65597163-65597182 MS.gene58311:CDS 35.0%
!!! CCACTTTTTGTAGAGCATAT+AGG + chr8.2:65597332-65597351 None:intergenic 35.0%
AAATGTAAAAGAGACCTCGC+TGG + chr8.2:65596489-65596508 None:intergenic 40.0%
AACCATATAGCTGACATCGA+TGG + chr8.2:65596848-65596867 None:intergenic 40.0%
AAGGCAACAATAACTTCCAC+CGG + chr8.2:65597086-65597105 None:intergenic 40.0%
ACATGCGAATTTGCAAAGTG+AGG + chr8.2:65596552-65596571 None:intergenic 40.0%
ACCCACAAACCATAATACAC+AGG + chr8.2:65597167-65597186 None:intergenic 40.0%
ACTGTTAGAGATTCCTCTTC+CGG - chr8.2:65597124-65597143 MS.gene58311:CDS 40.0%
ATAGAGCGAATTCCATCAAG+AGG + chr8.2:65596618-65596637 None:intergenic 40.0%
CCAAGTAATCATCTCTTGAC+CGG + chr8.2:65596881-65596900 None:intergenic 40.0%
GAAATACCTTTGTCCCCTTA+TGG - chr8.2:65596804-65596823 MS.gene58311:CDS 40.0%
GTCAAGAGATGATTACTTGG+TGG - chr8.2:65596881-65596900 MS.gene58311:CDS 40.0%
GTCCTGTGTATTATGGTTTG+TGG - chr8.2:65597162-65597181 MS.gene58311:CDS 40.0%
GTCGGGGAAGTAGAAAAATA+TGG + chr8.2:65596683-65596702 None:intergenic 40.0%
TAATGGGGCTATTCATTGGT+TGG - chr8.2:65597040-65597059 MS.gene58311:CDS 40.0%
TACCATCGATGTCAGCTATA+TGG - chr8.2:65596843-65596862 MS.gene58311:CDS 40.0%
TCTCGATGAGAGATAATACG+TGG - chr8.2:65596949-65596968 MS.gene58311:CDS 40.0%
TGATGACACAGATGGACAAA+AGG + chr8.2:65596916-65596935 None:intergenic 40.0%
! ATTCCTCTTCCGGATGATTT+TGG - chr8.2:65597134-65597153 MS.gene58311:CDS 40.0%
! CGATGTCAGCTATATGGTTT+TGG - chr8.2:65596849-65596868 MS.gene58311:CDS 40.0%
!! AACTGATGGTGGTAATGGAT+TGG - chr8.2:65597364-65597383 MS.gene58311:CDS 40.0%
!! ATTGGAACTGATGGTGGTAA+TGG - chr8.2:65597359-65597378 MS.gene58311:CDS 40.0%
!! GAATCTAAAGGCATCTGAAG+TGG - chr8.2:65597430-65597449 MS.gene58311:CDS 40.0%
AAACTACCTCACGATCACCA+GGG + chr8.2:65597484-65597503 None:intergenic 45.0%
CCGGTCAAGAGATGATTACT+TGG - chr8.2:65596878-65596897 MS.gene58311:CDS 45.0%
GGACTATGGCCAAAATCATC+CGG + chr8.2:65597146-65597165 None:intergenic 45.0%
GGCCATAGTCCTGTGTATTA+TGG - chr8.2:65597155-65597174 MS.gene58311:CDS 45.0%
GGTCCAGTGAAACAGAATCA+TGG + chr8.2:65596662-65596681 None:intergenic 45.0%
GTTGGAGAAACCTCTACGTA+TGG - chr8.2:65596757-65596776 MS.gene58311:CDS 45.0%
TAAACTACCTCACGATCACC+AGG + chr8.2:65597485-65597504 None:intergenic 45.0%
TCAAGAACTCCACCTCTTGA+TGG - chr8.2:65596603-65596622 MS.gene58311:CDS 45.0%
TTGGAACCATAAGGGGACAA+AGG + chr8.2:65596813-65596832 None:intergenic 45.0%
! ATCGCCCATATTTCAAGTGC+CGG + chr8.2:65597233-65597252 None:intergenic 45.0%
! TGGATGGATTCCATACGTAG+AGG + chr8.2:65596770-65596789 None:intergenic 45.0%
GAGCGAATTCCATCAAGAGG+TGG + chr8.2:65596615-65596634 None:intergenic 50.0%
TCCTGCTTTGCGATAAGTCC+TGG + chr8.2:65597012-65597031 None:intergenic 50.0%
TGGCCAAAATCATCCGGAAG+AGG + chr8.2:65597140-65597159 None:intergenic 50.0%
GAGTCTCTGCTTTCACTCCC+TGG - chr8.2:65597464-65597483 MS.gene58311:CDS 55.0%
GCCAGGACTTATCGCAAAGC+AGG - chr8.2:65597008-65597027 MS.gene58311:CDS 55.0%
TTCACTCCCTGGTGATCGTG+AGG - chr8.2:65597475-65597494 MS.gene58311:CDS 55.0%
ACCTCGCTGGCAACCTCAGC+AGG + chr8.2:65596476-65596495 None:intergenic 65.0%
TCCTGCTGAGGTTGCCAGCG+AGG - chr8.2:65596472-65596491 MS.gene58311:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 65596420 65597505 65596420 ID=MS.gene58311
chr8.2 mRNA 65596420 65597505 65596420 ID=MS.gene58311.t1;Parent=MS.gene58311
chr8.2 exon 65596420 65597505 65596420 ID=MS.gene58311.t1.exon1;Parent=MS.gene58311.t1
chr8.2 CDS 65596420 65597505 65596420 ID=cds.MS.gene58311.t1;Parent=MS.gene58311.t1
Gene Sequence

>MS.gene58311

ATGGCGAAGATGAACGAGAAGTTATATCTTCCTTCTGAGTTAATCATTCAAATCCTGCTGAGGTTGCCAGCGAGGTCTCTTTTACATTTCAAATTCGTTTGTAAGTCATGGTTTTCTCTTATCTCTGATCCTCACTTTGCAAATTCGCATGTTGATGTTTCCGCCGTAAGAATTGTGTTAATTTCAAGAACTCCACCTCTTGATGGAATTCGCTCTATAGATTTTGAAACATCCATTAACCATGATTCTGTTTCACTGGACCATATTTTTCTACTTCCCCGACATTACCATCTTTATGAAATTAAAGGTTCATGCAGAGGGTTTATATTTTTGCACTGTTGGAGAAACCTCTACGTATGGAATCCATCCACTAGATTTCACAAAGAAATACCTTTGTCCCCTTATGGTTCCAAATTACATGCATACCATCGATGTCAGCTATATGGTTTTGGTTATGACCGGTCAAGAGATGATTACTTGGTGGTTTTATTGTCCTTTTGTCCATCTGTGTCATCATATTTAGAGTTTTTCTCGATGAGAGATAATACGTGGAATAAAATTGAAGGTCCACACATCACTTATTTGAATGCCAGGACTTATCGCAAAGCAGGATCATTCTTTAATGGGGCTATTCATTGGTTGGCTTCTCATTATCATAGTTTACCGGTGGAAGTTATTGTTGCCTTTGATTTAATGGAAAGGAAACTGTTAGAGATTCCTCTTCCGGATGATTTTGGCCATAGTCCTGTGTATTATGGTTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGAATATGAATTTTCATAATCCGGCACTTGAAATATGGGCGATGAAAGAATACAAACTGCAATCATCTTGGACTAAAACTCTTGTAATTCCTATTGACATTGAAAAACCTAGATTTTTCCCTATATGCTCTACAAAAAGTGGTGATATTATTGGAACTGATGGTGGTAATGGATTGGTGAAGTATAATAATAAAGGACAACGGTTAGAGTATCTCAAAATGAATCTAAAGGCATCTGAAGTGGCCATGTATAAAGAGTCTCTGCTTTCACTCCCTGGTGATCGTGAGGTAGTTTAA

Protein sequence

>MS.gene58311.t1

MAKMNEKLYLPSELIIQILLRLPARSLLHFKFVCKSWFSLISDPHFANSHVDVSAVRIVLISRTPPLDGIRSIDFETSINHDSVSLDHIFLLPRHYHLYEIKGSCRGFIFLHCWRNLYVWNPSTRFHKEIPLSPYGSKLHAYHRCQLYGFGYDRSRDDYLVVLLSFCPSVSSYLEFFSMRDNTWNKIEGPHITYLNARTYRKAGSFFNGAIHWLASHYHSLPVEVIVAFDLMERKLLEIPLPDDFGHSPVYYGLWVFGEFLSLWNMNFHNPALEIWAMKEYKLQSSWTKTLVIPIDIEKPRFFPICSTKSGDIIGTDGGNGLVKYNNKGQRLEYLKMNLKASEVAMYKESLLSLPGDREVV