AlfalfaGEDB | MS.gene50337

M. sativa cultivar XinJiangDaYe / MS.gene50337

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50337.t1	RHN59188.1	56	193	42	3	1	162	167	347	2.70E-47	198.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50337.t1	G7JVS8	56.0	193	42	3	1	162	139	319	1.9e-47	198.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene50337	MS.gene24826	PPI
MS.gene50337	MS.gene43790	PPI
MS.gene57535	MS.gene50337	PPI
MS.gene87200	MS.gene50337	PPI
MS.gene58311	MS.gene50337	PPI
MS.gene50337	MS.gene59637	PPI
MS.gene033432	MS.gene50337	PPI
MS.gene50337	MS.gene88416	PPI
MS.gene59639	MS.gene50337	PPI
MS.gene50337	MS.gene003076	PPI
MS.gene50337	MS.gene87585	PPI
MS.gene50327	MS.gene50337	PPI
MS.gene066635	MS.gene50337	PPI
MS.gene50337	MS.gene024009	PPI
MS.gene50337	MS.gene036599	PPI
MS.gene010758	MS.gene50337	PPI
MS.gene50337	MS.gene006705	PPI
MS.gene87586	MS.gene50337	PPI
MS.gene50337	MS.gene061241	PPI
MS.gene57530	MS.gene50337	PPI
MS.gene50337	MS.gene035237	PPI
MS.gene50326	MS.gene50337	PPI
MS.gene50337	MS.gene51188	PPI
MS.gene51200	MS.gene50337	PPI
MS.gene50339	MS.gene50337	PPI
MS.gene046958	MS.gene50337	PPI
MS.gene50337	MS.gene38220	PPI
MS.gene50337	MS.gene40986	PPI
MS.gene50337	MS.gene041394	PPI
MS.gene88774	MS.gene50337	PPI
MS.gene50337	MS.gene03060	PPI
MS.gene50337	MS.gene036664	PPI
MS.gene50337	MS.gene024011	PPI
MS.gene50337	MS.gene58241	PPI
MS.gene50337	MS.gene064109	PPI
MS.gene42452	MS.gene50337	PPI
MS.gene50337	MS.gene058696	PPI
MS.gene50337	MS.gene009893	PPI
MS.gene063414	MS.gene50337	PPI
MS.gene036662	MS.gene50337	PPI
MS.gene57526	MS.gene50337	PPI
MS.gene021553	MS.gene50337	PPI
MS.gene051820	MS.gene50337	PPI
MS.gene26957	MS.gene50337	PPI
MS.gene97996	MS.gene50337	PPI
MS.gene036582	MS.gene50337	PPI
MS.gene27021	MS.gene50337	PPI
MS.gene035235	MS.gene50337	PPI
MS.gene50337	MS.gene40886	PPI
MS.gene58320	MS.gene50337	PPI
MS.gene26101	MS.gene50337	PPI
MS.gene27283	MS.gene50337	PPI
MS.gene50337	MS.gene036663	PPI
MS.gene50337	MS.gene68580	PPI
MS.gene50337	MS.gene041391	PPI
MS.gene58781	MS.gene50337	PPI
MS.gene57717	MS.gene50337	PPI
MS.gene50337	MS.gene57525	PPI
MS.gene011106	MS.gene50337	PPI
MS.gene033440	MS.gene50337	PPI
MS.gene44886	MS.gene50337	PPI
MS.gene87562	MS.gene50337	PPI
MS.gene50337	MS.gene030114	PPI
MS.gene066623	MS.gene50337	PPI
MS.gene038756	MS.gene50337	PPI
MS.gene40904	MS.gene50337	PPI
MS.gene50337	MS.gene045474	PPI
MS.gene24286	MS.gene50337	PPI
MS.gene50337	MS.gene036558	PPI
MS.gene50337	MS.gene87554	PPI
MS.gene87569	MS.gene50337	PPI
MS.gene50337	MS.gene40984	PPI
MS.gene041491	MS.gene50337	PPI
MS.gene50337	MS.gene064108	PPI
MS.gene019504	MS.gene50337	PPI
MS.gene033443	MS.gene50337	PPI
MS.gene50337	MS.gene016220	PPI
MS.gene059096	MS.gene50337	PPI
MS.gene57528	MS.gene50337	PPI
MS.gene50297	MS.gene50337	PPI
MS.gene006711	MS.gene50337	PPI
MS.gene27285	MS.gene50337	PPI
MS.gene58716	MS.gene50337	PPI
MS.gene68580	MS.gene50337	PPI
MS.gene033444	MS.gene50337	PPI
MS.gene019505	MS.gene50337	PPI
MS.gene045476	MS.gene50337	PPI
MS.gene58785	MS.gene50337	PPI
MS.gene24208	MS.gene50337	PPI
MS.gene50337	MS.gene58240	PPI
MS.gene034690	MS.gene50337	PPI
MS.gene50337	MS.gene27284	PPI
MS.gene50337	MS.gene063472	PPI
MS.gene066639	MS.gene50337	PPI
MS.gene26949	MS.gene50337	PPI
MS.gene50337	MS.gene57717	PPI
MS.gene50337	MS.gene034680	PPI
MS.gene96407	MS.gene50337	PPI
MS.gene50309	MS.gene50337	PPI
MS.gene50337	MS.gene48221	PPI
MS.gene036760	MS.gene50337	PPI
MS.gene77857	MS.gene50337	PPI
MS.gene44883	MS.gene50337	PPI
MS.gene50337	MS.gene066626	PPI
MS.gene57527	MS.gene50337	PPI
MS.gene51191	MS.gene50337	PPI
MS.gene50337	MS.gene063474	PPI
MS.gene50337	MS.gene51190	PPI
MS.gene50337	MS.gene58319	PPI
MS.gene50337	MS.gene044426	PPI
MS.gene033426	MS.gene50337	PPI
MS.gene50337	MS.gene034681	PPI
MS.gene50298	MS.gene50337	PPI
MS.gene50337	MS.gene57532	PPI
MS.gene67687	MS.gene50337	PPI
MS.gene50337	MS.gene033442	PPI
MS.gene035261	MS.gene50337	PPI
MS.gene50337	MS.gene009892	PPI
MS.gene063670	MS.gene50337	PPI
MS.gene50337	MS.gene058669	PPI
MS.gene50337	MS.gene066120	PPI
MS.gene066626	MS.gene50337	PPI
MS.gene71159	MS.gene50337	PPI
MS.gene019506	MS.gene50337	PPI
MS.gene058692	MS.gene50337	PPI
MS.gene033083	MS.gene50337	PPI
MS.gene50337	MS.gene041489	PPI
MS.gene69309	MS.gene50337	PPI
MS.gene63658	MS.gene50337	PPI
MS.gene024002	MS.gene50337	PPI
MS.gene033081	MS.gene50337	PPI
MS.gene50337	MS.gene024000	PPI
MS.gene50337	MS.gene034688	PPI
MS.gene50337	MS.gene24213	PPI
MS.gene035262	MS.gene50337	PPI
MS.gene034686	MS.gene50337	PPI
MS.gene50337	MS.gene033079	PPI
MS.gene50337	MS.gene034677	PPI
MS.gene40982	MS.gene50337	PPI
MS.gene070461	MS.gene50337	PPI
MS.gene50337	MS.gene055694	PPI
MS.gene50337	MS.gene059101	PPI
MS.gene51199	MS.gene50337	PPI
MS.gene50337	MS.gene035238	PPI
MS.gene50337	MS.gene064114	PPI
MS.gene50337	MS.gene87584	PPI
MS.gene50337	MS.gene58315	PPI
MS.gene87563	MS.gene50337	PPI
MS.gene50337	MS.gene80610	PPI
MS.gene033431	MS.gene50337	PPI
MS.gene24212	MS.gene50337	PPI
MS.gene50337	MS.gene90743	PPI
MS.gene041475	MS.gene50337	PPI
MS.gene81242	MS.gene50337	PPI
MS.gene50337	MS.gene85454	PPI
MS.gene64203	MS.gene50337	PPI
MS.gene045140	MS.gene50337	PPI
MS.gene060367	MS.gene50337	PPI
MS.gene024004	MS.gene50337	PPI
MS.gene42444	MS.gene50337	PPI
MS.gene51202	MS.gene50337	PPI
MS.gene059101	MS.gene50337	PPI
MS.gene50337	MS.gene058701	PPI
MS.gene50337	MS.gene064083	PPI
MS.gene26829	MS.gene50337	PPI
MS.gene064104	MS.gene50337	PPI
MS.gene50337	MS.gene048193	PPI
MS.gene50337	MS.gene58783	PPI
MS.gene50337	MS.gene024420	PPI
MS.gene54049	MS.gene50337	PPI
MS.gene50337	MS.gene024008	PPI
MS.gene43789	MS.gene50337	PPI
MS.gene50337	MS.gene54541	PPI
MS.gene50337	MS.gene39265	PPI
MS.gene50337	MS.gene053299	PPI
MS.gene072177	MS.gene50337	PPI
MS.gene58722	MS.gene50337	PPI
MS.gene50337	MS.gene28758	PPI
MS.gene064091	MS.gene50337	PPI
MS.gene50337	MS.gene044429	PPI
MS.gene50337	MS.gene42451	PPI
MS.gene064112	MS.gene50337	PPI
MS.gene50307	MS.gene50337	PPI
MS.gene24213	MS.gene50337	PPI
MS.gene43796	MS.gene50337	PPI
MS.gene044429	MS.gene50337	PPI
MS.gene58312	MS.gene50337	PPI
MS.gene36704	MS.gene50337	PPI
MS.gene036556	MS.gene50337	PPI
MS.gene58313	MS.gene50337	PPI
MS.gene066622	MS.gene50337	PPI
MS.gene44887	MS.gene50337	PPI
MS.gene85043	MS.gene50337	PPI
MS.gene39265	MS.gene50337	PPI
MS.gene033430	MS.gene50337	PPI
MS.gene036583	MS.gene50337	PPI
MS.gene88780	MS.gene50337	PPI
MS.gene41046	MS.gene50337	PPI
MS.gene87588	MS.gene50337	PPI
MS.gene055694	MS.gene50337	PPI
MS.gene017412	MS.gene50337	PPI
MS.gene50337	MS.gene40878	PPI
MS.gene50337	MS.gene44428	PPI
MS.gene96448	MS.gene50337	PPI
MS.gene51192	MS.gene50337	PPI
MS.gene77858	MS.gene50337	PPI
MS.gene041392	MS.gene50337	PPI
MS.gene50337	MS.gene035235	PPI
MS.gene58317	MS.gene50337	PPI
MS.gene50337	MS.gene058703	PPI
MS.gene044563	MS.gene50337	PPI
MS.gene069075	MS.gene50337	PPI
MS.gene50337	MS.gene012215	PPI
MS.gene40985	MS.gene50337	PPI
MS.gene031591	MS.gene50337	PPI
MS.gene58321	MS.gene50337	PPI
MS.gene041388	MS.gene50337	PPI
MS.gene50337	MS.gene22715	PPI
MS.gene062698	MS.gene50337	PPI
MS.gene50337	MS.gene58316	PPI
MS.gene57536	MS.gene50337	PPI
MS.gene96126	MS.gene50337	PPI
MS.gene019503	MS.gene50337	PPI
MS.gene016524	MS.gene50337	PPI
MS.gene50337	MS.gene58321	PPI
MS.gene87559	MS.gene50337	PPI
MS.gene50304	MS.gene50337	PPI
MS.gene50337	MS.gene87564	PPI
MS.gene50337	MS.gene36595	PPI
MS.gene59943	MS.gene50337	PPI
MS.gene50337	MS.gene061240	PPI
MS.gene31587	MS.gene50337	PPI
MS.gene036557	MS.gene50337	PPI
MS.gene041393	MS.gene50337	PPI
MS.gene033441	MS.gene50337	PPI
MS.gene50337	MS.gene041473	PPI
MS.gene50337	MS.gene50311	PPI
MS.gene50337	MS.gene058989	PPI
MS.gene50337	MS.gene036556	PPI
MS.gene063826	MS.gene50337	PPI
MS.gene50337	MS.gene57538	PPI
MS.gene50337	MS.gene041468	PPI
MS.gene84698	MS.gene50337	PPI
MS.gene50337	MS.gene058693	PPI
MS.gene50337	MS.gene27319	PPI
MS.gene44892	MS.gene50337	PPI
MS.gene50337	MS.gene041395	PPI
MS.gene58239	MS.gene50337	PPI
MS.gene50337	MS.gene42447	PPI
MS.gene066641	MS.gene50337	PPI
MS.gene50337	MS.gene51189	PPI
MS.gene000038	MS.gene50337	PPI
MS.gene57531	MS.gene50337	PPI
MS.gene064111	MS.gene50337	PPI
MS.gene39262	MS.gene50337	PPI
MS.gene053256	MS.gene50337	PPI
MS.gene50337	MS.gene044425	PPI
MS.gene025887	MS.gene50337	PPI
MS.gene019507	MS.gene50337	PPI
MS.gene75875	MS.gene50337	PPI
MS.gene041470	MS.gene50337	PPI
MS.gene058694	MS.gene50337	PPI
MS.gene064090	MS.gene50337	PPI
MS.gene50337	MS.gene40988	PPI
MS.gene058701	MS.gene50337	PPI
MS.gene50337	MS.gene24173	PPI
MS.gene50337	MS.gene036584	PPI
MS.gene015089	MS.gene50337	PPI
MS.gene006710	MS.gene50337	PPI
MS.gene90743	MS.gene50337	PPI
MS.gene50337	MS.gene27022	PPI
MS.gene44885	MS.gene50337	PPI
MS.gene011679	MS.gene50337	PPI
MS.gene060370	MS.gene50337	PPI
MS.gene033079	MS.gene50337	PPI
MS.gene64001	MS.gene50337	PPI
MS.gene50337	MS.gene023999	PPI
MS.gene57533	MS.gene50337	PPI
MS.gene50337	MS.gene69307	PPI
MS.gene032970	MS.gene50337	PPI
MS.gene50337	MS.gene036581	PPI
MS.gene77856	MS.gene50337	PPI
MS.gene50337	MS.gene019507	PPI
MS.gene40887	MS.gene50337	PPI
MS.gene50337	MS.gene000036	PPI
MS.gene50337	MS.gene50320	PPI
MS.gene034688	MS.gene50337	PPI
MS.gene51188	MS.gene50337	PPI
MS.gene63655	MS.gene50337	PPI
MS.gene50337	MS.gene58314	PPI
MS.gene50337	MS.gene87557	PPI
MS.gene060366	MS.gene50337	PPI
MS.gene50337	MS.gene035263	PPI
MS.gene50337	MS.gene67501	PPI
MS.gene50337	MS.gene96406	PPI
MS.gene50337	MS.gene053257	PPI
MS.gene50337	MS.gene51201	PPI
MS.gene57529	MS.gene50337	PPI
MS.gene50337	MS.gene50336	PPI
MS.gene80884	MS.gene50337	PPI
MS.gene50337	MS.gene77704	PPI
MS.gene009883	MS.gene50337	PPI
MS.gene40886	MS.gene50337	PPI
MS.gene40902	MS.gene50337	PPI
MS.gene033427	MS.gene50337	PPI
MS.gene50337	MS.gene047279	PPI
MS.gene50337	MS.gene50305	PPI
MS.gene27051	MS.gene50337	PPI
MS.gene50337	MS.gene032969	PPI
MS.gene060368	MS.gene50337	PPI
MS.gene033875	MS.gene50337	PPI
MS.gene041474	MS.gene50337	PPI
MS.gene27020	MS.gene50337	PPI
MS.gene50337	MS.gene68890	PPI
MS.gene066620	MS.gene50337	PPI
MS.gene035236	MS.gene50337	PPI
MS.gene50337	MS.gene42445	PPI
MS.gene50337	MS.gene86273	PPI
MS.gene50337	MS.gene26830	PPI
MS.gene059157	MS.gene50337	PPI
MS.gene51208	MS.gene50337	PPI
MS.gene028390	MS.gene50337	PPI
MS.gene50337	MS.gene51207	PPI
MS.gene50337	MS.gene63657	PPI
MS.gene62398	MS.gene50337	PPI
MS.gene50337	MS.gene059157	PPI
MS.gene60027	MS.gene50337	PPI
MS.gene50337	MS.gene023996	PPI
MS.gene045475	MS.gene50337	PPI
MS.gene50337	MS.gene045473	PPI
MS.gene88776	MS.gene50337	PPI
MS.gene50337	MS.gene50301	PPI
MS.gene50337	MS.gene070462	PPI
MS.gene35068	MS.gene50337	PPI
MS.gene041390	MS.gene50337	PPI
MS.gene90744	MS.gene50337	PPI
MS.gene51204	MS.gene50337	PPI
MS.gene92376	MS.gene50337	PPI
MS.gene50337	MS.gene031590	PPI
MS.gene000035	MS.gene50337	PPI
MS.gene50329	MS.gene50337	PPI
MS.gene070462	MS.gene50337	PPI
MS.gene31637	MS.gene50337	PPI
MS.gene87573	MS.gene50337	PPI
MS.gene50337	MS.gene066623	PPI
MS.gene50337	MS.gene064086	PPI
MS.gene50337	MS.gene035234	PPI
MS.gene57537	MS.gene50337	PPI
MS.gene50337	MS.gene064090	PPI
MS.gene034762	MS.gene50337	PPI
MS.gene059156	MS.gene50337	PPI
MS.gene50337	MS.gene90742	PPI
MS.gene50337	MS.gene24212	PPI
MS.gene009891	MS.gene50337	PPI
MS.gene50337	MS.gene50332	PPI
MS.gene50337	MS.gene024979	PPI
MS.gene82082	MS.gene50337	PPI
MS.gene50306	MS.gene50337	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50337.t1	MTR_4g023090	55.670	194	43	3	1	163	139	320	1.55e-61	194
MS.gene50337.t1	MTR_4g023130	54.688	192	37	4	1	162	90	261	1.10e-60	190
MS.gene50337.t1	MTR_4g023080	53.886	193	39	4	1	163	131	303	2.67e-59	188
MS.gene50337.t1	MTR_4g023440	57.143	161	46	3	3	163	144	281	3.05e-53	172
MS.gene50337.t1	MTR_4g023380	46.047	215	37	3	1	163	139	326	5.24e-52	170
MS.gene50337.t1	MTR_4g021785	50.000	194	46	4	1	163	131	304	2.81e-51	167
MS.gene50337.t1	MTR_4g117720	49.741	193	57	5	1	163	137	319	1.69e-50	166
MS.gene50337.t1	MTR_4g023070	47.120	191	56	3	18	163	129	319	7.58e-49	161
MS.gene50337.t1	MTR_4g023120	46.067	178	63	2	18	162	129	306	7.59e-47	156
MS.gene50337.t1	MTR_6g060650	46.354	192	64	4	1	163	139	320	2.50e-45	152
MS.gene50337.t1	MTR_4g023150	45.918	196	54	5	1	163	132	308	3.16e-43	147
MS.gene50337.t1	MTR_4g122850	47.208	197	59	8	1	163	125	310	5.26e-43	146
MS.gene50337.t1	MTR_3g034180	47.802	182	56	4	20	162	255	436	6.22e-43	149
MS.gene50337.t1	MTR_3g034130	48.352	182	55	4	20	162	141	322	9.14e-43	145
MS.gene50337.t1	MTR_4g118380	44.000	200	64	4	1	162	141	330	1.23e-42	145
MS.gene50337.t1	MTR_8g032390	46.939	196	58	8	1	162	139	322	2.40e-42	144
MS.gene50337.t1	MTR_4g117850	48.588	177	55	5	23	163	150	326	9.03e-42	143
MS.gene50337.t1	MTR_3g034160	46.739	184	57	5	20	163	141	323	4.35e-41	141
MS.gene50337.t1	MTR_3g103020	43.655	197	64	5	1	163	142	325	5.52e-41	141
MS.gene50337.t1	MTR_4g023190	45.918	196	53	6	1	163	132	307	6.24e-41	140
MS.gene50337.t1	MTR_4g094365	43.367	196	62	6	1	162	130	310	6.35e-40	138
MS.gene50337.t1	MTR_4g109280	50.000	160	50	3	33	162	145	304	1.30e-39	137
MS.gene50337.t1	MTR_8g433030	50.000	168	47	7	29	162	125	289	1.66e-39	136
MS.gene50337.t1	MTR_4g116330	42.784	194	64	5	1	163	148	325	2.34e-39	137
MS.gene50337.t1	MTR_4g023200	43.367	196	59	5	1	163	132	308	3.43e-39	136
MS.gene50337.t1	MTR_5g070080	47.904	167	54	4	29	163	168	333	3.90e-39	136
MS.gene50337.t1	MTR_4g116320	47.239	163	52	4	33	163	43	203	2.22e-37	129
MS.gene50337.t1	MTR_8g013010	51.079	139	52	5	1	133	178	306	1.51e-36	128
MS.gene50337.t1	MTR_5g070130	41.243	177	63	4	26	162	147	322	2.77e-36	129
MS.gene50337.t1	MTR_4g118400	51.773	141	49	3	41	162	106	246	4.15e-36	127
MS.gene50337.t1	MTR_4g117770	44.693	179	57	5	20	163	143	314	4.36e-34	123
MS.gene50337.t1	MTR_4g117810	44.693	179	57	5	20	163	143	314	4.36e-34	123
MS.gene50337.t1	MTR_8g040935	44.444	153	50	4	44	162	1	152	6.48e-33	116
MS.gene50337.t1	MTR_5g097210	42.640	197	62	7	1	163	131	310	9.82e-33	119
MS.gene50337.t1	MTR_4g109270	43.077	195	61	7	1	162	133	310	2.91e-32	118
MS.gene50337.t1	MTR_4g116330	45.181	166	61	7	1	163	148	286	3.64e-32	117
MS.gene50337.t1	MTR_5g070088	41.420	169	65	3	29	163	164	332	6.67e-32	117
MS.gene50337.t1	MTR_8g433040	41.837	196	59	6	1	162	138	312	1.21e-31	116
MS.gene50337.t1	MTR_8g032380	41.837	196	59	6	1	162	138	312	1.21e-31	116
MS.gene50337.t1	MTR_4g117780	39.394	198	70	6	1	163	132	314	1.79e-31	116
MS.gene50337.t1	MTR_4g117530	46.324	136	65	2	29	163	75	203	8.36e-31	112
MS.gene50337.t1	MTR_6g463430	43.590	156	47	5	44	164	1	150	1.58e-30	110
MS.gene50337.t1	MTR_4g114700	41.212	165	67	5	1	162	33	170	9.86e-30	108
MS.gene50337.t1	MTR_1g055195	42.197	173	50	6	29	162	263	424	1.41e-29	112
MS.gene50337.t1	MTR_4g117430	44.667	150	62	3	1	150	27	155	3.52e-29	105
MS.gene50337.t1	MTR_4g117750	40.541	185	65	7	21	163	125	306	1.53e-27	107
MS.gene50337.t1	MTR_4g117750	71.795	39	11	0	125	163	392	430	2.19e-11	61.2
MS.gene50337.t1	MTR_4g121580	40.704	199	43	9	1	163	139	298	4.90e-27	104
MS.gene50337.t1	MTR_1g055135	41.279	172	50	5	24	150	145	310	8.80e-27	103
MS.gene50337.t1	MTR_4g118370	37.572	173	55	6	25	163	54	207	7.54e-25	96.7
MS.gene50337.t1	MTR_1g055250	37.931	174	69	6	25	163	46	215	1.00e-24	97.8
MS.gene50337.t1	MTR_6g034720	44.094	127	61	4	1	125	54	172	1.15e-24	95.1
MS.gene50337.t1	MTR_4g117870	39.024	164	80	5	1	163	70	214	3.18e-24	95.1
MS.gene50337.t1	MTR_7g079370	36.747	166	64	5	29	155	133	296	3.08e-22	91.3
MS.gene50337.t1	MTR_4g116340	54.545	88	38	2	25	111	161	247	4.51e-22	89.4
MS.gene50337.t1	MTR_7g117720	39.264	163	39	4	1	162	116	219	7.22e-22	89.4
MS.gene50337.t1	MTR_8g102520	35.088	171	70	6	29	162	101	267	3.66e-20	85.5
MS.gene50337.t1	MTR_1g055175	40.650	123	39	3	57	145	8	130	3.60e-19	80.5
MS.gene50337.t1	MTR_7g079400	32.022	178	84	4	20	162	103	278	4.33e-18	79.7
MS.gene50337.t1	MTR_1g055165	45.977	87	18	1	88	145	161	247	1.18e-15	72.8
MS.gene50337.t1	MTR_8g098830	33.333	144	59	4	54	162	31	172	7.46e-15	69.7
MS.gene50337.t1	MTR_2g048580	33.607	122	45	3	55	140	155	276	2.20e-12	63.9
MS.gene50337.t1	MTR_4g122860	39.286	112	55	5	64	162	158	269	3.67e-11	60.5
MS.gene50337.t1	MTR_5g023000	65.789	38	13	0	125	162	8	45	4.06e-11	57.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 42 sgRNAs with CRISPR-Local

Find 55 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGACAATGTGCGGCTAATT+TGG	0.222275	4.4:-78330656	None:intergenic
AATGAATAGCCCCATTAAAT+AGG	0.222547	4.4:-78330897	None:intergenic
CGCCTTCATATACTTGGTTT+TGG	0.241496	4.4:+78330703	MS.gene50337:CDS
CATTGTTGCCTTTGATTTAA+CGG	0.288851	4.4:+78330954	MS.gene50337:CDS
TATTTAATGGGGCTATTCAT+TGG	0.316240	4.4:+78330899	MS.gene50337:CDS
CTAATGATACAGTTGAAATA+TGG	0.329864	4.4:+78331081	MS.gene50337:intron
ATGGCTTTGAGTCGTGATTT+AGG	0.341932	4.4:+78330922	MS.gene50337:CDS
AGAAAAGGGTCCCTATTTAA+TGG	0.349556	4.4:+78330886	MS.gene50337:CDS
GAAAAGGGTCCCTATTTAAT+GGG	0.364953	4.4:+78330887	MS.gene50337:CDS
CCGGTCAAGAGATGATTATT+TGG	0.374848	4.4:+78330732	MS.gene50337:CDS
GTCACCCATGGTCGCAGAAA+AGG	0.395681	4.4:+78330871	MS.gene50337:CDS
GCCGCACATTGTCATCGTAT+TGG	0.425136	4.4:+78330664	MS.gene50337:CDS
ATCTGCTACCATTGGATCAT+AGG	0.427213	4.4:-78330767	None:intergenic
ATGAATAGCCCCATTAAATA+GGG	0.428993	4.4:-78330896	None:intergenic
TCTTATCGCCTTCATATACT+TGG	0.436134	4.4:+78330697	MS.gene50337:CDS
CTTTGAGTCGTGATTTAGGT+TGG	0.458224	4.4:+78330926	MS.gene50337:CDS
TCACCCATGGTCGCAGAAAA+GGG	0.487287	4.4:+78330872	MS.gene50337:CDS
AATACAAAGTGCATTCGTCT+TGG	0.494278	4.4:+78331114	MS.gene50337:CDS
TAATGGGGCTATTCATTGGA+TGG	0.494477	4.4:+78330903	MS.gene50337:CDS
TAATACATGGAAAGAAATTG+AGG	0.497226	4.4:+78330828	MS.gene50337:CDS
GAAATAGCATCTGCTACCAT+TGG	0.502574	4.4:-78330775	None:intergenic
ATTGGGTGAAAGTATCGATC+AGG	0.504656	4.4:-78331170	None:intergenic
GTCAAGAGATGATTATTTGG+TGG	0.504882	4.4:+78330735	MS.gene50337:CDS
AACCAAAACCAAGTATATGA+AGG	0.524098	4.4:-78330705	None:intergenic
CGATCAGGAATTGCATTAAG+AGG	0.526394	4.4:-78331155	None:intergenic
GCGGCTAATTTGGAGTCAAA+AGG	0.531706	4.4:-78330646	None:intergenic
TTCATTGTCCTATGATCCAA+TGG	0.536743	4.4:+78330759	MS.gene50337:CDS
GTATATGAAGGCGATAAGAC+TGG	0.541415	4.4:-78330693	None:intergenic
TAATGATACAGTTGAAATAT+GGG	0.542942	4.4:+78331082	MS.gene50337:intron
TCTCATTTAGAGATAATACA+TGG	0.548869	4.4:+78330815	MS.gene50337:CDS
CCAAATAATCATCTCTTGAC+CGG	0.557184	4.4:-78330732	None:intergenic
AATACATGGAAAGAAATTGA+GGG	0.574680	4.4:+78330829	MS.gene50337:CDS
TAGTCAAACTCACTTGGAAG+AGG	0.576522	4.4:-78330997	None:intergenic
AGATGCTATTTCAACACATG+TGG	0.578858	4.4:+78330786	MS.gene50337:CDS
TTCCGTTACAATGTCACCCA+TGG	0.611703	4.4:+78330859	MS.gene50337:CDS
GATGCTATTTCAACACATGT+GGG	0.623104	4.4:+78330787	MS.gene50337:CDS
TTGGAGTCAAAAGGAGACAC+GGG	0.631270	4.4:-78330637	None:intergenic
ACCAATACGATGACAATGTG+CGG	0.635287	4.4:-78330665	None:intergenic
ATGCTATTTCAACACATGTG+GGG	0.643893	4.4:+78330788	MS.gene50337:CDS
TTTGGAGTCAAAAGGAGACA+CGG	0.650067	4.4:-78330638	None:intergenic
GACCATGGGTGACATTGTAA+CGG	0.651025	4.4:-78330861	None:intergenic
AAAAGGGTCCCTATTTAATG+GGG	0.672236	4.4:+78330888	MS.gene50337:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATGATACAGTTGAAATAT+GGG	+	chr4.4:78331082-78331101	MS.gene50337:intron	20.0%
!!!	ATTTTTTTGTAGAGTACATT+GGG	-	chr4.4:78331190-78331209	None:intergenic	20.0%
!	AATACATGGAAAGAAATTGA+GGG	+	chr4.4:78330829-78330848	MS.gene50337:CDS	25.0%
!	CAATGTACTCTACAAAAAAA+TGG	+	chr4.4:78331189-78331208	MS.gene50337:CDS	25.0%
!	CTAATGATACAGTTGAAATA+TGG	+	chr4.4:78331081-78331100	MS.gene50337:intron	25.0%
!	TAATACATGGAAAGAAATTG+AGG	+	chr4.4:78330828-78330847	MS.gene50337:CDS	25.0%
!	TCTCATTTAGAGATAATACA+TGG	+	chr4.4:78330815-78330834	MS.gene50337:CDS	25.0%
!!!	ATGTAGTTAATTCTAGTTTG+TGG	+	chr4.4:78331019-78331038	MS.gene50337:intron	25.0%
!!!	CATTTTTTTGTAGAGTACAT+TGG	-	chr4.4:78331191-78331210	None:intergenic	25.0%
!!!	TGTAGTTAATTCTAGTTTGT+GGG	+	chr4.4:78331020-78331039	MS.gene50337:intron	25.0%
	AACCAAAACCAAGTATATGA+AGG	-	chr4.4:78330708-78330727	None:intergenic	30.0%
	AATGAATAGCCCCATTAAAT+AGG	-	chr4.4:78330900-78330919	None:intergenic	30.0%
	ATGAATAGCCCCATTAAATA+GGG	-	chr4.4:78330899-78330918	None:intergenic	30.0%
	TATTTAATGGGGCTATTCAT+TGG	+	chr4.4:78330899-78330918	MS.gene50337:CDS	30.0%
!	CATTGTTGCCTTTGATTTAA+CGG	+	chr4.4:78330954-78330973	MS.gene50337:CDS	30.0%
!	TTTTCGTTCCGTTAAATCAA+AGG	-	chr4.4:78330965-78330984	None:intergenic	30.0%
!!	AATTCTAGTTTGTGGGTATA+TGG	+	chr4.4:78331027-78331046	MS.gene50337:intron	30.0%
	AAAAGGGTCCCTATTTAATG+GGG	+	chr4.4:78330888-78330907	MS.gene50337:CDS	35.0%
	AATACAAAGTGCATTCGTCT+TGG	+	chr4.4:78331114-78331133	MS.gene50337:CDS	35.0%
	ACTACATAGTCAAACTCACT+TGG	-	chr4.4:78331006-78331025	None:intergenic	35.0%
	AGAAAAGGGTCCCTATTTAA+TGG	+	chr4.4:78330886-78330905	MS.gene50337:CDS	35.0%
	CCAAATAATCATCTCTTGAC+CGG	-	chr4.4:78330735-78330754	None:intergenic	35.0%
	GAAAAGGGTCCCTATTTAAT+GGG	+	chr4.4:78330887-78330906	MS.gene50337:CDS	35.0%
	GTCAAGAGATGATTATTTGG+TGG	+	chr4.4:78330735-78330754	MS.gene50337:CDS	35.0%
	TCTTATCGCCTTCATATACT+TGG	+	chr4.4:78330697-78330716	MS.gene50337:CDS	35.0%
	TTCATTGTCCTATGATCCAA+TGG	+	chr4.4:78330759-78330778	MS.gene50337:CDS	35.0%
!!	AGATGCTATTTCAACACATG+TGG	+	chr4.4:78330786-78330805	MS.gene50337:CDS	35.0%
!!	ATGCTATTTCAACACATGTG+GGG	+	chr4.4:78330788-78330807	MS.gene50337:CDS	35.0%
!!	GATGCTATTTCAACACATGT+GGG	+	chr4.4:78330787-78330806	MS.gene50337:CDS	35.0%
!!!	TACTTGGTTTTGGTTATGAC+CGG	+	chr4.4:78330713-78330732	MS.gene50337:CDS	35.0%
	AATTTCTCAGTCGATGGCTA+TGG	+	chr4.4:78331052-78331071	MS.gene50337:intron	40.0%
	ACCAATACGATGACAATGTG+CGG	-	chr4.4:78330668-78330687	None:intergenic	40.0%
	ATCTGCTACCATTGGATCAT+AGG	-	chr4.4:78330770-78330789	None:intergenic	40.0%
	ATGACAATGTGCGGCTAATT+TGG	-	chr4.4:78330659-78330678	None:intergenic	40.0%
	ATGGAGAATTTCTCAGTCGA+TGG	+	chr4.4:78331046-78331065	MS.gene50337:intron	40.0%
	CCGGTCAAGAGATGATTATT+TGG	+	chr4.4:78330732-78330751	MS.gene50337:CDS	40.0%
	CGATCAGGAATTGCATTAAG+AGG	-	chr4.4:78331158-78331177	None:intergenic	40.0%
	CTTTGAGTCGTGATTTAGGT+TGG	+	chr4.4:78330926-78330945	MS.gene50337:CDS	40.0%
	GAAATAGCATCTGCTACCAT+TGG	-	chr4.4:78330778-78330797	None:intergenic	40.0%
	GTATATGAAGGCGATAAGAC+TGG	-	chr4.4:78330696-78330715	None:intergenic	40.0%
	TAATGGGGCTATTCATTGGA+TGG	+	chr4.4:78330903-78330922	MS.gene50337:CDS	40.0%
	TAGTCAAACTCACTTGGAAG+AGG	-	chr4.4:78331000-78331019	None:intergenic	40.0%
!	CGCCTTCATATACTTGGTTT+TGG	+	chr4.4:78330703-78330722	MS.gene50337:CDS	40.0%
!	TTTGGAGTCAAAAGGAGACA+CGG	-	chr4.4:78330641-78330660	None:intergenic	40.0%
!!	ATGGCTTTGAGTCGTGATTT+AGG	+	chr4.4:78330922-78330941	MS.gene50337:CDS	40.0%
!!	ATTGGGTGAAAGTATCGATC+AGG	-	chr4.4:78331173-78331192	None:intergenic	40.0%
	GACCATGGGTGACATTGTAA+CGG	-	chr4.4:78330864-78330883	None:intergenic	45.0%
	TTCCGTTACAATGTCACCCA+TGG	+	chr4.4:78330859-78330878	MS.gene50337:CDS	45.0%
	TTGGAGTCAAAAGGAGACAC+GGG	-	chr4.4:78330640-78330659	None:intergenic	45.0%
!	GCGGCTAATTTGGAGTCAAA+AGG	-	chr4.4:78330649-78330668	None:intergenic	45.0%
	GCCGCACATTGTCATCGTAT+TGG	+	chr4.4:78330664-78330683	MS.gene50337:CDS	50.0%
	TCACCCATGGTCGCAGAAAA+GGG	+	chr4.4:78330872-78330891	MS.gene50337:CDS	50.0%
	GTCACCCATGGTCGCAGAAA+AGG	+	chr4.4:78330871-78330890	MS.gene50337:CDS	55.0%
!	GGACCCTTTTCTGCGACCAT+GGG	-	chr4.4:78330878-78330897	None:intergenic	55.0%
!	GGGACCCTTTTCTGCGACCA+TGG	-	chr4.4:78330879-78330898	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	78330634	78331214	78330634	ID=MS.gene50337
chr4.4	mRNA	78330634	78331214	78330634	ID=MS.gene50337.t1;Parent=MS.gene50337
chr4.4	exon	78330634	78331006	78330634	ID=MS.gene50337.t1.exon1;Parent=MS.gene50337.t1
chr4.4	CDS	78330634	78331006	78330634	ID=cds.MS.gene50337.t1;Parent=MS.gene50337.t1
chr4.4	exon	78331093	78331214	78331093	ID=MS.gene50337.t1.exon2;Parent=MS.gene50337.t1
chr4.4	CDS	78331093	78331214	78331093	ID=cds.MS.gene50337.t1;Parent=MS.gene50337.t1

Gene Sequence

>MS.gene50337

ATGCCCGTGTCTCCTTTTGACTCCAAATTAGCCGCACATTGTCATCGTATTGGTTATGACCAGTCTTATCGCCTTCATATACTTGGTTTTGGTTATGACCGGTCAAGAGATGATTATTTGGTGGTTTCATTGTCCTATGATCCAATGGTAGCAGATGCTATTTCAACACATGTGGGGTTTTTCTCATTTAGAGATAATACATGGAAAGAAATTGAGGGTACTCACTTCCGTTACAATGTCACCCATGGTCGCAGAAAAGGGTCCCTATTTAATGGGGCTATTCATTGGATGGCTTTGAGTCGTGATTTAGGTTGGAGTGTCATTGTTGCCTTTGATTTAACGGAACGAAAATTGTTTGAGATGCCTCTTCCAAGTGAGTTTGACTATGTAGTTAATTCTAGTTTGTGGGTATATGGAGAATTTCTCAGTCGATGGCTATGGATTATGCTAATGATACAGTTGAAATATGGGTGATGAAAGAATACAAAGTGCATTCGTCTTGGACTAAAACTCTTGTTCTTCCTCTTAATGCAATTCCTGATCGATACTTTCACCCAATGTACTCTACAAAAAAATGGTGA

Protein sequence

>MS.gene50337.t1

MPVSPFDSKLAAHCHRIGYDQSYRLHILGFGYDRSRDDYLVVSLSYDPMVADAISTHVGFFSFRDNTWKEIEGTHFRYNVTHGRRKGSLFNGAIHWMALSRDLGWSVIVAFDLTERKLFEMPLPIEIWVMKEYKVHSSWTKTLVLPLNAIPDRYFHPMYSTKKW