AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40985


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40985.t1 MTR_1g055165 71.582 373 50 3 8 379 1 318 0.0 514
MS.gene40985.t1 MTR_1g055135 64.767 386 106 5 9 379 5 375 8.30e-166 469
MS.gene40985.t1 MTR_5g097210 54.011 374 142 7 14 376 6 360 1.56e-124 364
MS.gene40985.t1 MTR_1g055175 82.587 201 35 0 179 379 1 201 2.88e-118 341
MS.gene40985.t1 MTR_3g103020 52.835 388 131 12 16 379 19 378 4.70e-115 340
MS.gene40985.t1 MTR_1g055195 57.962 314 120 7 75 379 168 478 3.44e-114 341
MS.gene40985.t1 MTR_4g117850 52.493 381 132 14 14 372 20 373 6.24e-110 327
MS.gene40985.t1 MTR_4g109270 52.756 381 138 14 17 379 8 364 4.82e-109 324
MS.gene40985.t1 MTR_4g117750 52.880 382 136 9 16 378 2 358 5.36e-108 325
MS.gene40985.t1 MTR_4g117750 48.182 110 54 3 270 377 373 481 1.79e-22 99.0
MS.gene40985.t1 MTR_4g109280 54.068 381 130 14 16 379 7 359 1.08e-107 320
MS.gene40985.t1 MTR_3g034180 49.091 385 156 10 16 378 122 488 2.26e-106 322
MS.gene40985.t1 MTR_6g060650 51.289 388 146 12 14 378 5 372 2.57e-104 312
MS.gene40985.t1 MTR_4g122850 48.780 369 156 9 28 379 12 364 4.74e-104 312
MS.gene40985.t1 MTR_3g034130 49.468 376 143 11 16 365 8 362 9.42e-101 303
MS.gene40985.t1 MTR_4g117770 48.556 381 162 9 13 379 7 367 2.06e-100 302
MS.gene40985.t1 MTR_4g117810 48.556 381 162 9 13 379 7 367 2.06e-100 302
MS.gene40985.t1 MTR_5g070080 48.303 383 174 10 16 379 9 386 2.46e-100 303
MS.gene40985.t1 MTR_4g094365 48.413 378 161 9 16 379 7 364 1.11e-98 298
MS.gene40985.t1 MTR_4g023090 46.734 398 152 14 15 378 14 385 3.03e-98 297
MS.gene40985.t1 MTR_3g034160 48.320 387 156 9 16 378 8 374 8.42e-98 296
MS.gene40985.t1 MTR_4g116330 47.368 380 165 13 15 379 21 380 3.77e-97 294
MS.gene40985.t1 MTR_4g023080 47.594 374 157 12 16 378 8 353 4.52e-97 293
MS.gene40985.t1 MTR_4g117780 48.294 381 163 11 13 379 7 367 3.58e-96 291
MS.gene40985.t1 MTR_5g070088 47.118 399 153 13 16 377 6 383 2.42e-95 290
MS.gene40985.t1 MTR_4g021785 47.467 375 159 11 16 379 8 355 2.69e-95 288
MS.gene40985.t1 MTR_4g118380 49.062 373 133 13 14 350 5 356 3.56e-95 288
MS.gene40985.t1 MTR_5g070130 48.413 378 158 11 16 373 10 370 2.15e-94 287
MS.gene40985.t1 MTR_4g117720 47.150 386 125 14 16 379 50 378 1.72e-92 282
MS.gene40985.t1 MTR_4g023070 44.898 392 161 13 17 378 3 369 1.10e-91 280
MS.gene40985.t1 MTR_4g023380 44.169 403 150 13 15 379 14 379 4.36e-90 276
MS.gene40985.t1 MTR_8g433040 44.665 403 160 12 1 379 1 364 2.02e-89 274
MS.gene40985.t1 MTR_8g032380 44.665 403 160 12 1 379 1 364 2.02e-89 274
MS.gene40985.t1 MTR_4g023120 43.577 397 161 13 17 379 3 370 2.33e-87 269
MS.gene40985.t1 MTR_4g023440 44.241 382 131 12 15 379 16 332 6.00e-87 266
MS.gene40985.t1 MTR_4g118370 51.136 264 99 5 123 376 14 257 1.17e-81 250
MS.gene40985.t1 MTR_4g023190 44.974 378 163 14 16 377 9 357 2.85e-81 253
MS.gene40985.t1 MTR_4g023150 44.619 381 161 14 16 377 9 358 6.89e-81 252
MS.gene40985.t1 MTR_8g032390 43.377 385 155 11 8 374 31 370 1.67e-78 246
MS.gene40985.t1 MTR_4g023200 43.562 365 158 14 31 377 24 358 2.50e-77 243
MS.gene40985.t1 MTR_4g116330 42.632 380 144 14 15 379 21 341 1.77e-74 235
MS.gene40985.t1 MTR_4g023130 42.513 374 135 13 16 378 8 312 3.27e-73 231
MS.gene40985.t1 MTR_1g055250 62.121 198 64 4 168 356 51 246 2.42e-71 226
MS.gene40985.t1 MTR_8g013010 47.122 278 112 7 16 279 53 309 4.67e-71 225
MS.gene40985.t1 MTR_4g121580 43.213 361 140 13 7 345 1 318 2.19e-65 213
MS.gene40985.t1 MTR_4g118400 47.331 281 116 11 103 373 36 294 3.48e-65 209
MS.gene40985.t1 MTR_8g433030 41.270 378 140 11 8 374 31 337 1.79e-64 209
MS.gene40985.t1 MTR_4g117870 41.472 299 121 7 94 379 10 267 1.76e-63 204
MS.gene40985.t1 MTR_7g079400 44.891 274 130 7 124 379 67 337 2.60e-63 206
MS.gene40985.t1 MTR_2g048580 36.388 371 194 13 16 379 7 342 3.23e-59 195
MS.gene40985.t1 MTR_7g079370 40.336 357 164 13 46 374 16 351 2.79e-57 191
MS.gene40985.t1 MTR_8g102520 38.158 380 155 14 16 379 7 322 2.83e-57 190
MS.gene40985.t1 MTR_4g116320 47.511 221 93 7 171 376 43 255 5.96e-50 169
MS.gene40985.t1 MTR_8g040935 50.490 204 87 8 184 379 11 208 6.48e-50 167
MS.gene40985.t1 MTR_4g116340 40.613 261 102 9 3 245 22 247 1.38e-41 146
MS.gene40985.t1 MTR_6g463430 43.662 213 106 7 169 379 2 202 2.48e-41 144
MS.gene40985.t1 MTR_4g117530 39.759 249 92 8 147 379 47 253 5.88e-41 145
MS.gene40985.t1 MTR_7g079420 39.326 267 119 13 129 379 905 1144 1.74e-37 144
MS.gene40985.t1 MTR_7g117720 42.381 210 70 8 16 208 9 184 3.01e-34 128
MS.gene40985.t1 MTR_7g117720 41.905 105 49 4 278 374 172 272 2.44e-14 73.2
MS.gene40985.t1 MTR_4g114700 35.907 259 99 9 130 370 9 218 3.42e-33 124
MS.gene40985.t1 MTR_4g117430 49.315 146 64 3 142 282 15 155 8.66e-33 120
MS.gene40985.t1 MTR_4g118360 51.145 131 53 5 255 379 1 126 1.50e-32 119
MS.gene40985.t1 MTR_3g036290 29.921 381 212 17 1 365 1 342 1.01e-28 115
MS.gene40985.t1 MTR_1g094210 28.084 381 215 15 14 371 54 398 1.62e-28 115
MS.gene40985.t1 MTR_4g109290 40.449 178 58 5 15 188 7 140 2.69e-28 109
MS.gene40985.t1 MTR_2g028140 29.049 389 179 17 17 346 5 355 3.30e-28 114
MS.gene40985.t1 MTR_1g068875 28.840 319 170 12 17 309 4 291 6.72e-28 113
MS.gene40985.t1 MTR_1g094210 27.642 369 210 14 14 359 54 388 1.03e-27 113
MS.gene40985.t1 MTR_1g068835 28.882 322 167 12 17 309 4 292 1.23e-27 112
MS.gene40985.t1 MTR_4g055060 30.368 326 173 13 12 310 25 323 4.88e-27 110
MS.gene40985.t1 MTR_2g028110 29.730 370 180 17 17 345 4 334 1.13e-26 109
MS.gene40985.t1 MTR_2g046830 30.449 312 173 14 15 308 23 308 1.24e-26 110
MS.gene40985.t1 MTR_5g023000 55.556 99 34 3 286 379 6 99 1.80e-26 102
MS.gene40985.t1 MTR_2g021050 30.328 366 175 17 17 345 5 327 4.61e-26 108
MS.gene40985.t1 MTR_1g068860 28.750 320 172 11 17 309 4 294 5.73e-26 107
MS.gene40985.t1 MTR_2g028160 29.179 329 180 12 17 308 5 317 6.27e-26 108
MS.gene40985.t1 MTR_8g098830 40.828 169 94 5 182 348 31 195 6.50e-26 104
MS.gene40985.t1 MTR_3g006670 30.671 313 177 15 10 304 42 332 7.63e-26 108
MS.gene40985.t1 MTR_5g069120 41.237 194 74 9 27 196 1 178 3.23e-25 101
MS.gene40985.t1 MTR_2g021150 28.173 394 221 20 13 375 10 372 3.24e-25 105
MS.gene40985.t1 MTR_0667s0010 29.429 333 162 15 17 308 6 306 6.72e-25 105
MS.gene40985.t1 MTR_7g070830 28.800 375 191 13 14 329 18 375 1.09e-24 104
MS.gene40985.t1 MTR_2g046920 28.165 316 189 11 15 315 22 314 1.18e-24 103
MS.gene40985.t1 MTR_3g083010 28.297 417 212 17 17 373 6 395 1.80e-24 104
MS.gene40985.t1 MTR_2g046900 29.968 317 176 15 15 308 26 319 1.87e-24 103
MS.gene40985.t1 MTR_2g021155 29.474 380 214 16 12 363 31 384 1.95e-24 105
MS.gene40985.t1 MTR_4g122860 31.111 225 119 6 161 379 126 320 2.29e-24 102
MS.gene40985.t1 MTR_4g122860 62.069 58 20 1 15 72 68 123 1.22e-11 65.9
MS.gene40985.t1 MTR_2g426090 27.100 369 196 14 20 347 9 345 2.39e-24 103
MS.gene40985.t1 MTR_2g031680 27.812 320 170 12 17 308 6 292 3.38e-24 103
MS.gene40985.t1 MTR_1g055145 69.333 75 22 1 221 295 129 202 3.93e-24 100
MS.gene40985.t1 MTR_1g055145 50.459 109 40 1 20 128 36 130 1.20e-20 91.3
MS.gene40985.t1 MTR_2g426020 26.173 405 227 14 17 376 6 383 4.92e-24 102
MS.gene40985.t1 MTR_7g070880 27.358 424 223 15 14 372 18 421 6.11e-24 102
MS.gene40985.t1 MTR_4g133170 27.302 315 169 10 17 304 4 285 6.65e-24 102
MS.gene40985.t1 MTR_4g070550 27.132 387 198 14 17 349 5 361 7.55e-24 102
MS.gene40985.t1 MTR_2g425980 28.814 413 207 18 17 376 5 383 8.10e-24 102
MS.gene40985.t1 MTR_2g028130 29.268 328 181 11 17 309 5 316 1.26e-23 101
MS.gene40985.t1 MTR_2g426060 27.219 338 173 13 17 310 6 314 1.48e-23 101
MS.gene40985.t1 MTR_2g025420 27.066 351 175 14 17 313 6 329 1.96e-23 101
MS.gene40985.t1 MTR_7g056290 29.379 354 186 13 8 312 1 339 3.89e-23 100
MS.gene40985.t1 MTR_7g079450 40.288 139 79 3 241 379 3 137 4.20e-23 94.4
MS.gene40985.t1 MTR_5g022420 27.389 314 187 11 4 306 15 298 5.41e-23 99.4
MS.gene40985.t1 MTR_4g108820 28.013 307 152 10 14 308 39 288 5.47e-23 98.6
MS.gene40985.t1 MTR_2g426070 28.646 384 192 17 8 346 1 347 7.00e-23 99.4
MS.gene40985.t1 MTR_1g097330 30.696 316 165 16 15 308 14 297 7.59e-23 99.4
MS.gene40985.t1 MTR_2g021190 30.225 311 171 13 15 304 19 304 1.06e-22 98.6
MS.gene40985.t1 MTR_4g061340 29.341 334 160 14 13 309 22 316 1.16e-22 98.6
MS.gene40985.t1 MTR_3g014540 28.483 323 182 12 8 308 20 315 1.40e-22 98.2
MS.gene40985.t1 MTR_6g053240 29.375 320 171 13 13 304 24 316 1.62e-22 98.6
MS.gene40985.t1 MTR_2g047832 28.615 325 182 14 15 308 27 332 3.04e-22 97.8
MS.gene40985.t1 MTR_2g031720 27.439 328 168 12 17 308 6 299 3.34e-22 97.4
MS.gene40985.t1 MTR_3g010590 29.316 307 170 16 13 304 32 306 5.45e-22 96.7
MS.gene40985.t1 MTR_3g030250 28.713 303 180 13 15 308 35 310 5.81e-22 96.7
MS.gene40985.t1 MTR_3g007330 28.037 321 171 10 13 309 44 328 5.95e-22 96.7
MS.gene40985.t1 MTR_5g057790 29.747 316 167 15 17 308 46 330 8.41e-22 96.3
MS.gene40985.t1 MTR_2g021210 31.699 306 162 14 15 304 82 356 8.65e-22 96.7
MS.gene40985.t1 MTR_2g024110 28.571 315 169 13 17 304 4 289 1.54e-21 95.1
MS.gene40985.t1 MTR_8g099460 27.247 356 181 15 17 329 5 325 1.65e-21 95.5
MS.gene40985.t1 MTR_3g009240 29.560 318 163 11 13 304 30 312 2.54e-21 94.7
MS.gene40985.t1 MTR_8g101580 26.101 318 187 12 12 308 40 330 2.98e-21 94.7
MS.gene40985.t1 MTR_2g024100 27.673 318 152 13 32 304 22 306 3.48e-21 94.7
MS.gene40985.t1 MTR_4g031770 26.603 312 183 9 17 308 4 289 4.01e-21 94.0
MS.gene40985.t1 MTR_6g053260 29.773 309 175 13 15 304 335 620 5.47e-21 95.1
MS.gene40985.t1 MTR_3g072470 26.279 430 238 15 8 371 1 417 5.58e-21 94.0
MS.gene40985.t1 MTR_5g007610 31.212 330 161 16 15 309 39 337 6.72e-21 93.6
MS.gene40985.t1 MTR_7g078860 28.024 339 179 12 16 312 8 323 6.87e-21 93.6
MS.gene40985.t1 MTR_3g014570 27.108 332 187 13 3 309 15 316 8.05e-21 93.2
MS.gene40985.t1 MTR_7g060940 28.395 324 180 9 14 306 19 321 1.33e-20 92.8
MS.gene40985.t1 MTR_2g026010 27.586 319 179 12 17 308 4 297 1.69e-20 92.4
MS.gene40985.t1 MTR_3g023930 29.000 300 166 14 15 304 32 294 1.81e-20 92.0
MS.gene40985.t1 MTR_3g083640 28.534 382 220 18 13 371 51 402 1.86e-20 92.4
MS.gene40985.t1 MTR_7g407070 30.723 332 167 17 12 304 26 333 3.71e-20 91.7
MS.gene40985.t1 MTR_2g031640 28.037 321 171 15 17 308 6 295 4.41e-20 91.3
MS.gene40985.t1 MTR_2g078900 27.987 318 166 15 13 304 29 309 4.53e-20 90.9
MS.gene40985.t1 MTR_1g097560 29.096 354 187 20 13 341 32 346 6.31e-20 90.5
MS.gene40985.t1 MTR_3g009310 30.094 319 168 14 15 309 40 327 7.31e-20 90.5
MS.gene40985.t1 MTR_8g062660 26.617 402 217 17 3 372 8 363 8.43e-20 91.7
MS.gene40985.t1 MTR_3g011100 29.688 320 178 15 13 309 231 526 8.47e-20 91.7
MS.gene40985.t1 MTR_1g056710 30.573 314 175 14 13 308 30 318 9.67e-20 90.1
MS.gene40985.t1 MTR_6g090180 25.581 387 196 15 16 343 46 399 1.01e-19 90.5
MS.gene40985.t1 MTR_7g056390 29.379 354 196 14 8 318 1 343 1.04e-19 90.5
MS.gene40985.t1 MTR_0760s0010 28.726 369 213 16 22 371 52 389 1.12e-19 90.1
MS.gene40985.t1 MTR_1g114700 30.868 311 178 13 13 306 25 315 1.14e-19 90.1
MS.gene40985.t1 MTR_8g467140 28.387 310 182 11 16 308 31 317 1.17e-19 89.4
MS.gene40985.t1 MTR_3g013770 28.662 314 183 12 15 308 31 323 1.40e-19 89.7
MS.gene40985.t1 MTR_6g080680 26.374 364 207 14 16 343 18 356 1.61e-19 89.7
MS.gene40985.t1 MTR_0128s0020 29.268 328 186 13 13 312 14 323 2.01e-19 89.4
MS.gene40985.t1 MTR_2g046800 27.221 349 188 13 13 317 10 336 2.21e-19 89.4
MS.gene40985.t1 MTR_3g010920 28.523 298 172 9 15 304 42 306 2.96e-19 88.6
MS.gene40985.t1 MTR_0464s0020 30.117 342 190 15 17 318 23 355 3.01e-19 89.0
MS.gene40985.t1 MTR_2g055970 29.206 315 173 15 16 308 210 496 3.57e-19 89.4
MS.gene40985.t1 MTR_3g024150 29.333 300 172 15 20 304 38 312 5.46e-19 88.2
MS.gene40985.t1 MTR_1g088120 27.887 355 180 11 8 312 1 329 5.61e-19 88.2
MS.gene40985.t1 MTR_4g030830 24.938 401 239 12 17 371 9 393 5.85e-19 88.2
MS.gene40985.t1 MTR_3g013740 30.351 313 183 15 17 308 44 342 5.91e-19 88.2
MS.gene40985.t1 MTR_5g057710 28.616 318 168 14 17 308 46 330 6.58e-19 87.8
MS.gene40985.t1 MTR_3g006500 29.260 311 191 15 8 308 9 300 7.10e-19 87.4
MS.gene40985.t1 MTR_2g038680 24.578 415 231 15 17 372 16 407 7.34e-19 87.8
MS.gene40985.t1 MTR_5g011200 28.684 380 222 18 1 360 1 351 1.02e-18 87.0
MS.gene40985.t1 MTR_2g029990 30.769 312 162 17 18 304 52 334 1.07e-18 87.4
MS.gene40985.t1 MTR_1g055200 63.492 63 22 1 126 187 5 67 1.21e-18 80.9
MS.gene40985.t1 MTR_5g057690 26.774 310 174 10 17 308 46 320 1.35e-18 87.0
MS.gene40985.t1 MTR_7g007300 30.065 306 180 12 13 308 97 378 1.38e-18 87.4
MS.gene40985.t1 MTR_7g056003 26.500 400 238 14 19 371 17 407 1.66e-18 86.7
MS.gene40985.t1 MTR_7g056820 26.247 381 205 15 15 349 5 355 1.70e-18 86.7
MS.gene40985.t1 MTR_0115s0020 25.369 406 237 17 17 374 10 397 1.86e-18 86.7
MS.gene40985.t1 MTR_3g010870 27.476 313 186 14 6 304 26 311 1.88e-18 86.3
MS.gene40985.t1 MTR_6g086825 27.765 425 212 23 16 377 69 461 2.15e-18 86.7
MS.gene40985.t1 MTR_3g010390 28.923 325 189 17 12 309 27 336 2.39e-18 86.3
MS.gene40985.t1 MTR_0064s0160 26.485 404 239 18 16 379 41 426 2.62e-18 86.3
MS.gene40985.t1 MTR_5g057020 28.383 303 163 12 17 303 46 310 2.67e-18 85.5
MS.gene40985.t1 MTR_7g077970 28.994 338 182 14 15 309 5 327 2.89e-18 86.3
MS.gene40985.t1 MTR_4g107820 25.000 332 179 11 4 308 29 317 3.33e-18 85.9
MS.gene40985.t1 MTR_4g107780 25.000 332 179 11 4 308 29 317 3.33e-18 85.9
MS.gene40985.t1 MTR_4g107780 25.000 332 179 11 4 308 29 317 4.31e-18 85.5
MS.gene40985.t1 MTR_4g107820 25.000 332 179 11 4 308 29 317 4.35e-18 85.5
MS.gene40985.t1 MTR_6g027910 27.763 389 218 16 20 371 12 374 4.86e-18 85.1
MS.gene40985.t1 MTR_0044s0300 26.623 308 180 12 15 304 36 315 4.94e-18 85.1
MS.gene40985.t1 MTR_1g050542 24.538 379 240 11 12 371 53 404 5.27e-18 85.1
MS.gene40985.t1 MTR_7g060960 29.080 337 156 12 14 321 29 311 5.93e-18 84.7
MS.gene40985.t1 MTR_3g007360 27.660 329 179 16 20 321 55 351 6.74e-18 85.1
MS.gene40985.t1 MTR_3g007410 28.049 328 179 16 20 321 55 351 7.19e-18 84.7
MS.gene40985.t1 MTR_3g007270 26.586 331 176 13 15 309 45 344 7.22e-18 85.1
MS.gene40985.t1 MTR_3g436150 30.982 326 165 16 13 304 28 327 8.28e-18 84.7
MS.gene40985.t1 MTR_1g054575 27.451 306 182 11 12 303 47 326 1.03e-17 85.1
MS.gene40985.t1 MTR_1g061330 26.566 399 218 17 17 379 4 363 1.13e-17 84.3
MS.gene40985.t1 MTR_3g030240 26.667 315 165 14 13 304 33 304 1.13e-17 84.0
MS.gene40985.t1 MTR_4g024890 24.923 325 180 11 16 304 9 305 1.22e-17 84.0
MS.gene40985.t1 MTR_4g006270 27.097 310 169 10 17 308 4 274 1.30e-17 84.0
MS.gene40985.t1 MTR_3g009260 28.659 328 175 15 1 304 22 314 1.63e-17 83.6
MS.gene40985.t1 MTR_8g073550 34.104 173 97 6 13 180 26 186 1.73e-17 81.3
MS.gene40985.t1 MTR_3g011060 29.697 330 171 20 12 308 23 324 1.87e-17 83.6
MS.gene40985.t1 MTR_7g055977 28.743 334 165 12 16 309 6 306 2.14e-17 83.2
MS.gene40985.t1 MTR_7g057270 29.179 329 182 12 17 309 26 339 2.15e-17 83.6
MS.gene40985.t1 MTR_2g461450 27.869 305 172 9 17 304 18 291 2.25e-17 82.8
MS.gene40985.t1 MTR_1g097490 28.723 376 213 21 17 371 49 390 2.48e-17 83.2
MS.gene40985.t1 MTR_3g007430 27.215 316 170 12 20 308 46 328 2.49e-17 83.2
MS.gene40985.t1 MTR_4g023430 61.429 70 27 0 4 73 28 97 2.89e-17 80.5
MS.gene40985.t1 MTR_4g023430 40.698 86 40 3 301 379 141 222 9.35e-11 61.6
MS.gene40985.t1 MTR_3g036335 26.646 319 176 15 12 304 36 322 4.41e-17 82.4
MS.gene40985.t1 MTR_5g037680 26.748 329 187 12 16 308 7 317 4.90e-17 82.8
MS.gene40985.t1 MTR_3g006530 26.992 389 222 17 15 371 38 396 5.10e-17 82.4
MS.gene40985.t1 MTR_7g079160 27.603 413 206 17 16 357 7 397 6.39e-17 82.4
MS.gene40985.t1 MTR_7g078040 29.942 344 182 16 14 309 6 338 6.40e-17 82.4
MS.gene40985.t1 MTR_2g025960 26.577 222 120 7 123 308 1 215 9.26e-17 80.5
MS.gene40985.t1 MTR_8g012090 25.071 351 204 15 3 328 2 318 9.28e-17 80.9
MS.gene40985.t1 MTR_3g007300 27.020 396 184 19 10 371 42 366 1.06e-16 81.3
MS.gene40985.t1 MTR_3g010520 28.618 304 163 17 15 304 23 286 1.09e-16 80.9
MS.gene40985.t1 MTR_2g021800 25.269 372 204 13 16 328 15 371 1.18e-16 81.3
MS.gene40985.t1 MTR_7g062100 28.228 333 176 14 17 314 24 328 1.24e-16 81.3
MS.gene40985.t1 MTR_7g017170 27.027 333 184 16 17 308 18 332 1.45e-16 80.9
MS.gene40985.t1 MTR_7g062060 29.204 339 179 17 16 309 11 333 1.52e-16 80.9
MS.gene40985.t1 MTR_7g017130 27.027 333 184 16 17 308 18 332 1.55e-16 80.9
MS.gene40985.t1 MTR_4g013180 27.711 332 185 13 16 312 10 321 1.83e-16 80.9
MS.gene40985.t1 MTR_4g019990 25.806 403 238 14 16 379 5 385 2.04e-16 80.5
MS.gene40985.t1 MTR_1g071010 25.700 393 237 16 15 371 13 386 2.06e-16 80.5
MS.gene40985.t1 MTR_3g036430 27.419 310 147 13 15 304 18 269 2.12e-16 80.1
MS.gene40985.t1 MTR_1g115160 26.230 305 185 9 14 306 19 295 2.77e-16 79.7
MS.gene40985.t1 MTR_3g010430 29.338 317 169 16 13 304 32 318 2.92e-16 80.1
MS.gene40985.t1 MTR_2g043400 27.812 320 194 11 17 309 23 332 2.98e-16 80.1
MS.gene40985.t1 MTR_2g104340 24.286 420 249 15 4 377 1 397 3.18e-16 80.1
MS.gene40985.t1 MTR_6g478230 26.521 411 225 19 16 377 26 408 3.55e-16 80.1
MS.gene40985.t1 MTR_0128s0070 28.485 330 187 12 13 313 18 327 3.56e-16 79.7
MS.gene40985.t1 MTR_3g030330 27.607 326 183 14 15 321 18 309 4.45e-16 79.3
MS.gene40985.t1 MTR_7g056760 29.254 335 182 17 9 306 15 331 4.64e-16 79.3
MS.gene40985.t1 MTR_3g024110 26.159 302 194 10 10 304 94 373 4.69e-16 79.7
MS.gene40985.t1 MTR_0242s0060 29.042 334 179 16 14 306 6 322 7.01e-16 79.0
MS.gene40985.t1 MTR_0242s0040 29.042 334 179 16 14 306 6 322 7.01e-16 79.0
MS.gene40985.t1 MTR_7g055930 27.209 430 220 20 17 371 13 424 8.37e-16 79.0
MS.gene40985.t1 MTR_4g028510 27.078 373 201 17 17 343 16 363 8.47e-16 79.0
MS.gene40985.t1 MTR_4g129190 26.347 334 179 13 17 309 6 313 1.13e-15 78.2
MS.gene40985.t1 MTR_2g031700 26.354 277 141 12 17 263 6 249 1.27e-15 77.0
MS.gene40985.t1 MTR_1g115185 26.216 370 212 17 15 365 37 364 1.44e-15 78.2
MS.gene40985.t1 MTR_6g048140 30.341 323 186 14 1 304 21 323 1.52e-15 77.8
MS.gene40985.t1 MTR_7g061060 26.875 320 182 12 16 304 12 310 1.68e-15 77.8
MS.gene40985.t1 MTR_7g050520 27.576 330 166 13 13 304 18 312 1.80e-15 77.8
MS.gene40985.t1 MTR_3g030310 27.244 312 181 13 15 304 19 306 1.87e-15 77.4
MS.gene40985.t1 MTR_3g013950 26.650 409 214 18 20 373 9 386 1.93e-15 77.4
MS.gene40985.t1 MTR_2g022000 26.415 371 200 14 16 328 15 370 2.10e-15 77.8
MS.gene40985.t1 MTR_5g010550 25.948 343 185 13 17 303 58 387 2.10e-15 77.8
MS.gene40985.t1 MTR_8g046310 26.478 389 231 18 16 375 15 377 2.16e-15 77.4
MS.gene40985.t1 MTR_2g047892 27.217 327 178 16 14 304 19 321 2.24e-15 77.4
MS.gene40985.t1 MTR_7g028660 27.536 345 181 14 14 318 8 323 2.40e-15 77.0
MS.gene40985.t1 MTR_3g030350 29.808 312 179 17 8 304 26 312 2.43e-15 77.4
MS.gene40985.t1 MTR_7g013590 29.012 324 182 13 20 320 39 337 2.60e-15 77.4
MS.gene40985.t1 MTR_5g010550 25.948 343 185 13 17 303 44 373 2.87e-15 77.4
MS.gene40985.t1 MTR_7g055870 27.506 429 220 21 17 371 13 424 2.89e-15 77.0
MS.gene40985.t1 MTR_2g043410 27.554 323 191 10 17 309 22 331 2.98e-15 77.0
MS.gene40985.t1 MTR_7g055987 28.097 331 175 14 13 312 16 314 3.04e-15 76.6
MS.gene40985.t1 MTR_7g061050 26.300 327 182 13 16 309 12 312 3.81e-15 76.6
MS.gene40985.t1 MTR_0649s0020 27.027 333 201 11 14 318 8 326 3.89e-15 76.6
MS.gene40985.t1 MTR_6g021880 28.146 302 172 13 28 304 31 312 4.18e-15 76.6
MS.gene40985.t1 MTR_7g056503 25.604 414 229 17 9 371 12 397 4.83e-15 76.3
MS.gene40985.t1 MTR_1g442850 26.140 329 188 13 16 312 4 309 5.12e-15 76.3
MS.gene40985.t1 MTR_6g017280 26.036 338 172 14 17 309 9 313 5.13e-15 76.3
MS.gene40985.t1 MTR_6g013270 26.708 322 188 13 8 306 20 316 5.49e-15 76.3
MS.gene40985.t1 MTR_3g010970 28.425 292 176 15 20 304 51 316 5.82e-15 76.3
MS.gene40985.t1 MTR_2g047200 27.414 321 187 12 14 304 17 321 6.66e-15 75.9
MS.gene40985.t1 MTR_4g013185 27.945 365 179 18 8 312 1 341 8.52e-15 75.9
MS.gene40985.t1 MTR_4g033495 27.224 371 192 15 14 332 24 368 9.06e-15 75.9
MS.gene40985.t1 MTR_7g061090 24.848 330 198 11 16 309 21 336 9.98e-15 75.5
MS.gene40985.t1 MTR_7g016930 26.888 331 173 16 16 311 15 311 1.21e-14 74.7
MS.gene40985.t1 MTR_7g066100 27.826 345 174 15 11 304 1 321 1.26e-14 75.1
MS.gene40985.t1 MTR_6g048120 27.607 326 189 13 4 304 23 326 1.57e-14 74.7
MS.gene40985.t1 MTR_3g010620 25.281 356 232 13 13 363 29 355 1.79e-14 74.7
MS.gene40985.t1 MTR_3g006570 28.710 310 178 14 13 304 17 301 1.87e-14 74.3
MS.gene40985.t1 MTR_5g046300 28.617 311 168 20 15 304 2 279 1.87e-14 74.3
MS.gene40985.t1 MTR_5g046290 28.617 311 168 20 15 304 2 279 1.87e-14 74.3
MS.gene40985.t1 MTR_4g030980 24.939 413 214 15 17 357 15 403 2.14e-14 74.7
MS.gene40985.t1 MTR_1g068905 28.295 258 131 10 17 259 4 222 2.35e-14 73.6
MS.gene40985.t1 MTR_1g054725 27.129 317 180 13 13 304 16 306 2.35e-14 74.3
MS.gene40985.t1 MTR_0267s0050 26.966 356 201 15 20 334 9 346 2.38e-14 74.3
MS.gene40985.t1 MTR_5g043160 27.536 345 174 16 19 306 52 377 2.94e-14 74.3
MS.gene40985.t1 MTR_4g117550 24.069 403 221 16 16 377 16 374 3.04e-14 73.9
MS.gene40985.t1 MTR_3g011120 27.848 316 184 15 16 304 13 311 4.10e-14 73.6
MS.gene40985.t1 MTR_8g013005 55.000 60 26 1 320 379 1 59 4.71e-14 66.6
MS.gene40985.t1 MTR_1g015730 26.176 340 174 13 14 312 6 309 5.36e-14 73.2
MS.gene40985.t1 MTR_7g052150 26.761 355 165 13 14 315 19 331 5.48e-14 73.2
MS.gene40985.t1 MTR_7g050480 27.356 329 168 14 13 304 18 312 5.59e-14 73.2
MS.gene40985.t1 MTR_5g069930 25.152 330 183 10 16 309 5 306 6.07e-14 72.8
MS.gene40985.t1 MTR_4g030090 26.190 336 188 12 8 304 1 315 7.14e-14 72.8
MS.gene40985.t1 MTR_4g130330 27.792 385 192 22 11 343 1 351 7.80e-14 72.8
MS.gene40985.t1 MTR_5g096710 28.395 324 178 11 13 304 19 320 9.10e-14 72.4
MS.gene40985.t1 MTR_3g058480 28.986 276 136 11 15 259 37 283 9.77e-14 72.0
MS.gene40985.t1 MTR_2g006360 28.155 309 151 14 20 317 49 297 1.00e-13 72.0
MS.gene40985.t1 MTR_5g008530 62.069 58 20 1 17 74 18 73 1.04e-13 66.2
MS.gene40985.t1 MTR_7g091640 25.220 341 192 14 16 317 34 350 1.14e-13 72.0
MS.gene40985.t1 MTR_6g007135 26.115 314 191 10 17 308 26 320 1.15e-13 72.0
MS.gene40985.t1 MTR_7g066850 23.587 407 242 13 13 371 19 404 1.31e-13 72.4
MS.gene40985.t1 MTR_3g058470 26.829 328 169 11 1 304 19 299 1.32e-13 72.0
MS.gene40985.t1 MTR_5g046260 26.776 366 189 19 15 371 2 297 1.33e-13 71.2
MS.gene40985.t1 MTR_7g067680 28.758 306 168 15 12 304 43 311 1.37e-13 72.0
MS.gene40985.t1 MTR_8g467670 25.464 377 208 18 16 347 13 361 1.69e-13 71.6
MS.gene40985.t1 MTR_6g004660 28.972 321 169 16 17 304 16 310 1.72e-13 71.6
MS.gene40985.t1 MTR_7g066030 25.799 407 229 19 16 372 20 403 2.26e-13 71.2
MS.gene40985.t1 MTR_5g010560 25.073 343 186 13 17 303 44 371 2.59e-13 71.2
MS.gene40985.t1 MTR_7g056710 24.791 359 201 14 11 329 12 341 2.61e-13 70.9
MS.gene40985.t1 MTR_3g011650 31.667 240 113 13 14 232 73 282 2.63e-13 70.1
MS.gene40985.t1 MTR_4g055820 25.000 356 198 13 4 308 1 338 2.83e-13 70.9
MS.gene40985.t1 MTR_3g437520 26.647 334 201 13 17 312 23 350 3.32e-13 71.2
MS.gene40985.t1 MTR_3g023940 23.607 377 243 15 15 371 32 383 3.40e-13 70.9
MS.gene40985.t1 MTR_6g461660 26.437 348 172 16 16 308 18 336 3.58e-13 70.9
MS.gene40985.t1 MTR_7g050490 31.863 204 104 7 13 200 4 188 3.94e-13 67.8
MS.gene40985.t1 MTR_7g078900 26.744 344 198 14 8 309 3 334 4.22e-13 70.5
MS.gene40985.t1 MTR_4g013175 28.056 360 185 14 8 312 1 341 4.33e-13 70.5
MS.gene40985.t1 MTR_6g055210 26.627 338 171 14 15 303 20 329 4.35e-13 70.5
MS.gene40985.t1 MTR_5g048160 26.970 330 185 15 17 304 4 319 6.02e-13 70.1
MS.gene40985.t1 MTR_0097s0030 24.679 389 233 15 17 370 14 377 6.17e-13 70.1
MS.gene40985.t1 MTR_2g047240 24.679 389 233 15 17 370 14 377 6.17e-13 70.1
MS.gene40985.t1 MTR_4g028660 25.231 432 226 22 1 372 1 395 6.61e-13 69.7
MS.gene40985.t1 MTR_4g027450 25.231 432 226 22 1 372 1 395 6.61e-13 69.7
MS.gene40985.t1 MTR_1g055375 26.562 320 189 14 20 316 7 303 7.59e-13 69.7
MS.gene40985.t1 MTR_5g056020 23.913 368 204 12 15 326 15 362 8.00e-13 70.1
MS.gene40985.t1 MTR_5g023570 37.795 127 56 5 12 136 32 137 8.70e-13 65.9
MS.gene40985.t1 MTR_7g061010 26.276 392 230 14 14 370 19 386 1.03e-12 69.3
MS.gene40985.t1 MTR_3g009250 30.159 252 126 13 1 232 22 243 1.07e-12 67.8
MS.gene40985.t1 MTR_2g021252 24.808 391 205 17 20 374 50 387 1.41e-12 68.9
MS.gene40985.t1 MTR_7g066840 24.289 387 249 12 17 371 23 397 1.59e-12 68.9
MS.gene40985.t1 MTR_0627s0010 25.294 340 193 13 17 310 38 362 2.06e-12 68.6
MS.gene40985.t1 MTR_7g017040 22.850 407 247 13 16 377 15 399 2.69e-12 68.2
MS.gene40985.t1 MTR_5g022045 24.260 338 190 13 17 310 35 350 2.79e-12 68.2
MS.gene40985.t1 MTR_4g134560 24.363 353 185 12 17 308 31 362 2.92e-12 68.2
MS.gene40985.t1 MTR_1g112930 27.832 309 173 17 14 303 22 299 2.92e-12 67.8
MS.gene40985.t1 MTR_7g022600 28.947 266 132 11 6 234 10 255 2.99e-12 68.2
MS.gene40985.t1 MTR_7g035295 27.327 333 166 14 3 304 8 295 4.24e-12 67.4
MS.gene40985.t1 MTR_5g010610 25.439 342 185 14 17 303 34 360 5.58e-12 67.4
MS.gene40985.t1 MTR_2g066150 27.206 272 153 13 16 274 11 250 6.29e-12 66.6
MS.gene40985.t1 MTR_7g056570 25.215 349 170 15 11 312 12 316 6.63e-12 67.0
MS.gene40985.t1 MTR_7g077070 25.217 345 188 13 17 309 16 342 6.76e-12 67.0
MS.gene40985.t1 MTR_4g023100 51.786 56 24 1 323 378 66 118 7.03e-12 62.4
MS.gene40985.t1 MTR_7g056737 25.904 332 179 13 8 304 13 312 7.69e-12 66.6
MS.gene40985.t1 MTR_4g011660 32.512 203 100 8 6 185 5 193 7.69e-12 66.6
MS.gene40985.t1 MTR_7g078840 25.143 350 214 11 8 312 1 347 8.59e-12 66.6
MS.gene40985.t1 MTR_4g080200 22.905 358 216 9 17 349 3 325 1.11e-11 65.9
MS.gene40985.t1 MTR_4g028680 25.059 423 239 21 1 372 1 396 1.58e-11 65.9
MS.gene40985.t1 MTR_3g058440 26.909 275 141 11 4 247 20 265 1.64e-11 65.1
MS.gene40985.t1 MTR_1g055070 26.429 280 155 11 12 259 44 304 1.67e-11 65.5
MS.gene40985.t1 MTR_5g057643 28.502 207 108 8 17 203 46 232 1.90e-11 64.3
MS.gene40985.t1 MTR_6g004210 26.190 336 191 12 28 324 36 353 2.35e-11 65.1
MS.gene40985.t1 MTR_3g010440 24.585 301 155 9 13 309 22 254 3.03e-11 64.3
MS.gene40985.t1 MTR_4g030760 24.290 317 181 10 17 309 73 354 3.52e-11 64.7
MS.gene40985.t1 MTR_1g029650 22.989 348 205 12 14 323 5 327 3.74e-11 64.7
MS.gene40985.t1 MTR_7g069550 23.961 409 223 19 4 351 1 382 3.76e-11 64.7
MS.gene40985.t1 MTR_6g046320 25.641 351 193 13 17 310 39 378 3.93e-11 64.7
MS.gene40985.t1 MTR_4g031020 24.378 402 230 16 17 357 15 403 4.61e-11 64.3
MS.gene40985.t1 MTR_3g024040 25.413 303 176 12 23 309 37 305 4.66e-11 64.3
MS.gene40985.t1 MTR_6g034830 35.659 129 52 4 16 142 19 118 6.57e-11 59.7
MS.gene40985.t1 MTR_4g030110 26.074 349 165 17 6 309 19 319 7.01e-11 63.5
MS.gene40985.t1 MTR_7g056797 29.305 331 169 16 13 302 19 325 8.84e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40985.t1 AT3G06240 29.000 400 223 16 17 371 36 419 2.89e-28 115
MS.gene40985.t1 AT4G12560 28.426 394 213 19 17 370 4 368 2.21e-22 98.2
MS.gene40985.t1 AT4G12560 28.426 394 213 19 17 370 4 368 2.21e-22 98.2
MS.gene40985.t1 AT4G12560 28.426 394 213 19 17 370 4 368 2.21e-22 98.2
MS.gene40985.t1 AT3G23880 29.193 322 182 10 6 306 3 299 1.67e-21 95.1
MS.gene40985.t1 AT3G07870 25.155 322 196 11 17 311 28 331 7.91e-15 75.9
MS.gene40985.t1 AT4G19940 25.217 345 214 12 12 329 30 357 2.70e-14 74.3
MS.gene40985.t1 AT5G49610 27.746 346 177 14 18 336 10 309 3.53e-14 73.6
MS.gene40985.t1 AT2G40925 25.634 355 187 16 17 329 27 346 3.37e-12 67.8
MS.gene40985.t1 AT1G12870 21.600 375 228 17 17 353 33 379 8.06e-12 66.6
MS.gene40985.t1 AT3G17710 26.506 332 188 16 17 323 6 306 1.88e-11 65.5

Find 89 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTAACCTCACTAAGATTT+TGG 0.254628 1.3:-40677555 None:intergenic
AAGATGAAACTGTGAATTTC+CGG 0.283140 1.3:-40677705 None:intergenic
ATCTATAGATTTACCGTCAT+TGG 0.290911 1.3:+40677766 MS.gene40985:CDS
TTAGTAGAGTCGGTCTTTAA+TGG 0.303396 1.3:+40678142 MS.gene40985:CDS
ACGAGGATACGGTTGATATA+TGG 0.318288 1.3:+40678338 MS.gene40985:CDS
TAGTAGAGTCGGTCTTTAAT+GGG 0.321567 1.3:+40678143 MS.gene40985:CDS
GTTCTACAGATTGTGGGTTA+TGG 0.322646 1.3:+40678278 MS.gene40985:CDS
GGCAGAGGTGGCGGAGCTTA+TGG 0.329362 1.3:+40677490 MS.gene40985:CDS
TTCTACAGATTGTGGGTTAT+GGG 0.335042 1.3:+40678279 MS.gene40985:CDS
CTTGTTCAAAAGCTTATATA+TGG 0.337506 1.3:+40677897 MS.gene40985:CDS
TGTTGTTGCATTTGATTTAG+TGG 0.338010 1.3:+40678210 MS.gene40985:CDS
TATTGCAAAGATTCACGAAA+TGG 0.346680 1.3:+40678541 MS.gene40985:CDS
TTCACTTTCGTATGATTACT+TGG 0.347584 1.3:+40678027 MS.gene40985:CDS
ACTACTTATGATACCGTTCA+TGG 0.348788 1.3:+40678412 MS.gene40985:CDS
CGTAGGATTCTGTTCGTAAC+CGG 0.359469 1.3:+40677686 MS.gene40985:CDS
AAATCTATAGATCGAAATTC+AGG 0.360952 1.3:-40677755 None:intergenic
TGAAGATCAAAATGAGATTC+CGG 0.375582 1.3:-40677836 None:intergenic
AAACGAATAAGAGACTTAAC+TGG 0.393097 1.3:-40677575 None:intergenic
TGTGGGTTATGGGTATTTAG+AGG 0.393917 1.3:+40678289 MS.gene40985:CDS
TCTTTAATGGGGCTATTCAC+TGG 0.398766 1.3:+40678155 MS.gene40985:CDS
TCGTGAATCTTTGCAATAGT+AGG 0.398959 1.3:-40678536 None:intergenic
AATACAAAGTGCAGTCATCT+TGG 0.401037 1.3:+40678371 MS.gene40985:CDS
GAACGATAGTCAATATCATC+TGG 0.402023 1.3:-40678259 None:intergenic
GAAAAGGCCCTACTACAAAA+AGG 0.403815 1.3:-40678106 None:intergenic
GTTCCGATTGGCTATGTATA+CGG 0.408148 1.3:+40678564 MS.gene40985:CDS
TCTAAGTCTGTGGGCTATAG+TGG 0.408225 1.3:+40678315 MS.gene40985:CDS
CGAGGATACGGTTGATATAT+GGG 0.413196 1.3:+40678339 MS.gene40985:CDS
AAACTAGGGTTCAGTGGAAC+AGG 0.416096 1.3:-40677806 None:intergenic
GGCGGAGCTTATGGCGGAGG+TGG 0.420813 1.3:+40677499 MS.gene40985:CDS
CGAGTCAACCGATGATTACT+TGG 0.431042 1.3:+40678000 MS.gene40985:CDS
TCTCATTGAGAGCTAATGAA+TGG 0.433657 1.3:+40678056 MS.gene40985:CDS
GTTGGAACAGATTGCCGTAC+TGG 0.437052 1.3:+40678472 MS.gene40985:CDS
GGAGTAGCAGTTAAGAGTGT+TGG 0.441292 1.3:-40677734 None:intergenic
ATTAAAGACCGACTCTACTA+AGG 0.448181 1.3:-40678140 None:intergenic
GACTATCGTTCTACAGATTG+TGG 0.450288 1.3:+40678271 MS.gene40985:CDS
TAATGGGGCTATTCACTGGT+TGG 0.454880 1.3:+40678159 MS.gene40985:CDS
TCACTTTCGTATGATTACTT+GGG 0.462335 1.3:+40678028 MS.gene40985:CDS
AAGACGCATGGCAGAGGTGG+CGG 0.474092 1.3:+40677481 None:intergenic
ATACAAAGTGCAGTCATCTT+GGG 0.475310 1.3:+40678372 MS.gene40985:CDS
GGCTATAGTGGACGAGGATA+CGG 0.477662 1.3:+40678327 MS.gene40985:CDS
TCAAATCCGTTTCTAAGTCA+TGG 0.484548 1.3:+40677597 MS.gene40985:CDS
ATTGCAAAGATTCACGAAAT+GGG 0.486500 1.3:+40678542 MS.gene40985:CDS
AGCAGTTAAGAGTGTTGGAG+AGG 0.495150 1.3:-40677729 None:intergenic
AGGTATTTGTCTATGAAATC+CGG 0.495854 1.3:-40677930 None:intergenic
ACTATCGTTCTACAGATTGT+GGG 0.498654 1.3:+40678272 MS.gene40985:CDS
CTCATTGAGAGCTAATGAAT+GGG 0.499506 1.3:+40678057 MS.gene40985:CDS
TAAGCTTCCTCATTGTCACT+AGG 0.504127 1.3:-40678604 None:intergenic
CAGAAGAAGACGCATGGCAG+AGG 0.505673 1.3:+40677475 None:intergenic
CAAATTAAAGGTTCATGTAG+AGG 0.506008 1.3:+40677857 MS.gene40985:CDS
TATGCAACACTAGGAGAGAA+AGG 0.507765 1.3:-40677950 None:intergenic
CACTTTCGTATGATTACTTG+GGG 0.510380 1.3:+40678029 MS.gene40985:CDS
ATCAATTCATCAGGCAGATA+CGG 0.511263 1.3:-40677530 None:intergenic
TGTCTATCCCTTAGTAGAGT+CGG 0.518268 1.3:+40678132 MS.gene40985:CDS
GGTGGCGGAGCTTATGGCGG+AGG 0.518755 1.3:+40677496 MS.gene40985:CDS
AAATTAAAGGTTCATGTAGA+GGG 0.531136 1.3:+40677858 MS.gene40985:CDS
TAAGGGATAGACAAAGGAAA+AGG 0.532498 1.3:-40678122 None:intergenic
AAGAAGACGCATGGCAGAGG+TGG 0.533136 1.3:+40677478 None:intergenic
TAGAGGATTTCTAAGTCTGT+GGG 0.535913 1.3:+40678306 MS.gene40985:CDS
TTAGAGGATTTCTAAGTCTG+TGG 0.535921 1.3:+40678305 MS.gene40985:CDS
TTGCATTTGATTTAGTGGAA+AGG 0.543544 1.3:+40678215 MS.gene40985:CDS
GTCAACCGATGATTACTTGG+TGG 0.544552 1.3:+40678003 MS.gene40985:CDS
TGTCTATGAAATCCGGTGGA+TGG 0.546054 1.3:-40677923 None:intergenic
CTGCTGCCACACACATTCGT+AGG 0.546250 1.3:+40677669 MS.gene40985:CDS
TTCACGAAATGGGTTCCGAT+TGG 0.551409 1.3:+40678552 MS.gene40985:CDS
AAGCTTCCTCATTGTCACTA+GGG 0.552135 1.3:-40678603 None:intergenic
AGAAAACCATGACTTAGAAA+CGG 0.552831 1.3:-40677603 None:intergenic
AACAGATTGCCGTACTGGAT+TGG 0.563604 1.3:+40678477 MS.gene40985:CDS
ACTCCGTATACATAGCCAAT+CGG 0.564595 1.3:-40678567 None:intergenic
TTAAAGACCGACTCTACTAA+GGG 0.568134 1.3:-40678139 None:intergenic
AGAGGTGGCGGAGCTTATGG+CGG 0.592939 1.3:+40677493 MS.gene40985:CDS
AACGATAGTCAATATCATCT+GGG 0.594341 1.3:-40678258 None:intergenic
CATATCTCACCAATCCAGTA+CGG 0.602204 1.3:-40678486 None:intergenic
TGAAACCACCAAGTAATCAT+CGG 0.604255 1.3:-40678008 None:intergenic
TATATATGGAATCCATCCAC+CGG 0.611591 1.3:+40677911 MS.gene40985:CDS
CTCTACTAAGGGATAGACAA+AGG 0.613219 1.3:-40678128 None:intergenic
TAGTCAATATCATCTGGGAG+AGG 0.613889 1.3:-40678253 None:intergenic
TCATCAGGCAGATACGGTGG+TGG 0.622257 1.3:-40677524 None:intergenic
AGTAGAGTCGGTCTTTAATG+GGG 0.625463 1.3:+40678144 MS.gene40985:CDS
TTCACTCCCTAGTGACAATG+AGG 0.626833 1.3:+40678597 MS.gene40985:CDS
TACAAGGGAAATGCCATGAA+CGG 0.628081 1.3:-40678425 None:intergenic
TTGGTGAGATATGATGAGGA+AGG 0.631695 1.3:+40678496 MS.gene40985:CDS
TTATAATCATCGTCCAATGA+CGG 0.634276 1.3:-40677779 None:intergenic
TGATCACCAAAATCTTAGTG+AGG 0.643902 1.3:+40677549 MS.gene40985:CDS
AACATTAAATATGCAACACT+AGG 0.647550 1.3:-40677959 None:intergenic
TATTTGTCTATGAAATCCGG+TGG 0.647593 1.3:-40677927 None:intergenic
TCTGTGGGCTATAGTGGACG+AGG 0.648914 1.3:+40678321 MS.gene40985:CDS
CAGAATCCTACGAATGTGTG+TGG 0.660839 1.3:-40677675 None:intergenic
AATTCATCAGGCAGATACGG+TGG 0.683856 1.3:-40677527 None:intergenic
TGGATTGGTGAGATATGATG+AGG 0.686473 1.3:+40678492 MS.gene40985:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAATGTTTTGTGGTTTT+GGG + chr1.3:40677972-40677991 MS.gene40985:CDS 20.0%
!!! CATTTTGATCTTCAAATTAA+AGG + chr1.3:40677845-40677864 MS.gene40985:CDS 20.0%
!!! TATTTAATGTTTTGTGGTTT+TGG + chr1.3:40677971-40677990 MS.gene40985:CDS 20.0%
! AAATCTATAGATCGAAATTC+AGG - chr1.3:40677758-40677777 None:intergenic 25.0%
! AAATTAAAGGTTCATGTAGA+GGG + chr1.3:40677858-40677877 MS.gene40985:CDS 25.0%
! AACATTAAATATGCAACACT+AGG - chr1.3:40677962-40677981 None:intergenic 25.0%
! CTTGTTCAAAAGCTTATATA+TGG + chr1.3:40677897-40677916 MS.gene40985:CDS 25.0%
!! GTTGCATATTTAATGTTTTG+TGG + chr1.3:40677965-40677984 MS.gene40985:CDS 25.0%
AAACGAATAAGAGACTTAAC+TGG - chr1.3:40677578-40677597 None:intergenic 30.0%
AACGATAGTCAATATCATCT+GGG - chr1.3:40678261-40678280 None:intergenic 30.0%
AAGATGAAACTGTGAATTTC+CGG - chr1.3:40677708-40677727 None:intergenic 30.0%
ACAAAAAGTGGTGATATTGT+TGG + chr1.3:40678454-40678473 MS.gene40985:CDS 30.0%
AGAAAACCATGACTTAGAAA+CGG - chr1.3:40677606-40677625 None:intergenic 30.0%
AGGTATTTGTCTATGAAATC+CGG - chr1.3:40677933-40677952 None:intergenic 30.0%
ATCTATAGATTTACCGTCAT+TGG + chr1.3:40677766-40677785 MS.gene40985:CDS 30.0%
ATTGCAAAGATTCACGAAAT+GGG + chr1.3:40678542-40678561 MS.gene40985:CDS 30.0%
CAAATTAAAGGTTCATGTAG+AGG + chr1.3:40677857-40677876 MS.gene40985:CDS 30.0%
TATTGCAAAGATTCACGAAA+TGG + chr1.3:40678541-40678560 MS.gene40985:CDS 30.0%
TCACTTTCGTATGATTACTT+GGG + chr1.3:40678028-40678047 MS.gene40985:CDS 30.0%
TGAAGATCAAAATGAGATTC+CGG - chr1.3:40677839-40677858 None:intergenic 30.0%
TTATAATCATCGTCCAATGA+CGG - chr1.3:40677782-40677801 None:intergenic 30.0%
TTCACTTTCGTATGATTACT+TGG + chr1.3:40678027-40678046 MS.gene40985:CDS 30.0%
! ACTTTTTGTGCAACATACAA+GGG - chr1.3:40678443-40678462 None:intergenic 30.0%
! TGTTGTTGCATTTGATTTAG+TGG + chr1.3:40678210-40678229 MS.gene40985:CDS 30.0%
! TTGCATTTGATTTAGTGGAA+AGG + chr1.3:40678215-40678234 MS.gene40985:CDS 30.0%
!! ATTTTGGTGATCAATTCATC+AGG - chr1.3:40677542-40677561 None:intergenic 30.0%
AATACAAAGTGCAGTCATCT+TGG + chr1.3:40678371-40678390 MS.gene40985:CDS 35.0%
ACTACTTATGATACCGTTCA+TGG + chr1.3:40678412-40678431 MS.gene40985:CDS 35.0%
ACTATCGTTCTACAGATTGT+GGG + chr1.3:40678272-40678291 MS.gene40985:CDS 35.0%
ATACAAAGTGCAGTCATCTT+GGG + chr1.3:40678372-40678391 MS.gene40985:CDS 35.0%
ATCAATTCATCAGGCAGATA+CGG - chr1.3:40677533-40677552 None:intergenic 35.0%
ATTCCGGAAGTGAAAAACTA+GGG - chr1.3:40677823-40677842 None:intergenic 35.0%
CACTTTCGTATGATTACTTG+GGG + chr1.3:40678029-40678048 MS.gene40985:CDS 35.0%
CTCATTGAGAGCTAATGAAT+GGG + chr1.3:40678057-40678076 MS.gene40985:CDS 35.0%
CTTGTATGTTGCACAAAAAG+TGG + chr1.3:40678442-40678461 MS.gene40985:CDS 35.0%
GAACGATAGTCAATATCATC+TGG - chr1.3:40678262-40678281 None:intergenic 35.0%
TAAGGGATAGACAAAGGAAA+AGG - chr1.3:40678125-40678144 None:intergenic 35.0%
TAGAGGATTTCTAAGTCTGT+GGG + chr1.3:40678306-40678325 MS.gene40985:CDS 35.0%
TAGTAGAGTCGGTCTTTAAT+GGG + chr1.3:40678143-40678162 MS.gene40985:CDS 35.0%
TATATATGGAATCCATCCAC+CGG + chr1.3:40677911-40677930 MS.gene40985:CDS 35.0%
TATTTGTCTATGAAATCCGG+TGG - chr1.3:40677930-40677949 None:intergenic 35.0%
TCAAATCCGTTTCTAAGTCA+TGG + chr1.3:40677597-40677616 MS.gene40985:CDS 35.0%
TCGTGAATCTTTGCAATAGT+AGG - chr1.3:40678539-40678558 None:intergenic 35.0%
TCTCATTGAGAGCTAATGAA+TGG + chr1.3:40678056-40678075 MS.gene40985:CDS 35.0%
TGAAACCACCAAGTAATCAT+CGG - chr1.3:40678011-40678030 None:intergenic 35.0%
TGATCACCAAAATCTTAGTG+AGG + chr1.3:40677549-40677568 MS.gene40985:CDS 35.0%
TTAGAGGATTTCTAAGTCTG+TGG + chr1.3:40678305-40678324 MS.gene40985:CDS 35.0%
TTAGTAGAGTCGGTCTTTAA+TGG + chr1.3:40678142-40678161 MS.gene40985:CDS 35.0%
! ATTAAAGACCGACTCTACTA+AGG - chr1.3:40678143-40678162 None:intergenic 35.0%
! CGATTTGCCTTTTTGTAGTA+GGG + chr1.3:40678099-40678118 MS.gene40985:CDS 35.0%
! TGGTAACCTCACTAAGATTT+TGG - chr1.3:40677558-40677577 None:intergenic 35.0%
! TTAAAGACCGACTCTACTAA+GGG - chr1.3:40678142-40678161 None:intergenic 35.0%
! TTCTACAGATTGTGGGTTAT+GGG + chr1.3:40678279-40678298 MS.gene40985:CDS 35.0%
!! CACTTTTTGTGCAACATACA+AGG - chr1.3:40678444-40678463 None:intergenic 35.0%
!! TCGATTTGCCTTTTTGTAGT+AGG + chr1.3:40678098-40678117 MS.gene40985:CDS 35.0%
AAGCTTCCTCATTGTCACTA+GGG - chr1.3:40678606-40678625 None:intergenic 40.0%
ACTCCGTATACATAGCCAAT+CGG - chr1.3:40678570-40678589 None:intergenic 40.0%
AGTAGAGTCGGTCTTTAATG+GGG + chr1.3:40678144-40678163 MS.gene40985:CDS 40.0%
AGTGAAAAACTAGGGTTCAG+TGG - chr1.3:40677815-40677834 None:intergenic 40.0%
CATATCTCACCAATCCAGTA+CGG - chr1.3:40678489-40678508 None:intergenic 40.0%
CTCTACTAAGGGATAGACAA+AGG - chr1.3:40678131-40678150 None:intergenic 40.0%
GAAAAGGCCCTACTACAAAA+AGG - chr1.3:40678109-40678128 None:intergenic 40.0%
GACTATCGTTCTACAGATTG+TGG + chr1.3:40678271-40678290 MS.gene40985:CDS 40.0%
GATTCCGGAAGTGAAAAACT+AGG - chr1.3:40677824-40677843 None:intergenic 40.0%
TAAGCTTCCTCATTGTCACT+AGG - chr1.3:40678607-40678626 None:intergenic 40.0%
TACAAGGGAAATGCCATGAA+CGG - chr1.3:40678428-40678447 None:intergenic 40.0%
TAGTCAATATCATCTGGGAG+AGG - chr1.3:40678256-40678275 None:intergenic 40.0%
TATGCAACACTAGGAGAGAA+AGG - chr1.3:40677953-40677972 None:intergenic 40.0%
TCTTTAATGGGGCTATTCAC+TGG + chr1.3:40678155-40678174 MS.gene40985:CDS 40.0%
TGTCTATCCCTTAGTAGAGT+CGG + chr1.3:40678132-40678151 MS.gene40985:CDS 40.0%
TTGGTGAGATATGATGAGGA+AGG + chr1.3:40678496-40678515 MS.gene40985:CDS 40.0%
! ACGAGGATACGGTTGATATA+TGG + chr1.3:40678338-40678357 MS.gene40985:CDS 40.0%
! CGAGGATACGGTTGATATAT+GGG + chr1.3:40678339-40678358 MS.gene40985:CDS 40.0%
! GTTCCGATTGGCTATGTATA+CGG + chr1.3:40678564-40678583 MS.gene40985:CDS 40.0%
! GTTCTACAGATTGTGGGTTA+TGG + chr1.3:40678278-40678297 MS.gene40985:CDS 40.0%
! TGTGGGTTATGGGTATTTAG+AGG + chr1.3:40678289-40678308 MS.gene40985:CDS 40.0%
!! GAACCCTAGTTTTTCACTTC+CGG + chr1.3:40677817-40677836 MS.gene40985:CDS 40.0%
!! TGGATTGGTGAGATATGATG+AGG + chr1.3:40678492-40678511 MS.gene40985:CDS 40.0%
AAACTAGGGTTCAGTGGAAC+AGG - chr1.3:40677809-40677828 None:intergenic 45.0%
AACAGATTGCCGTACTGGAT+TGG + chr1.3:40678477-40678496 MS.gene40985:CDS 45.0%
AATTCATCAGGCAGATACGG+TGG - chr1.3:40677530-40677549 None:intergenic 45.0%
CAGAATCCTACGAATGTGTG+TGG - chr1.3:40677678-40677697 None:intergenic 45.0%
CGAGTCAACCGATGATTACT+TGG + chr1.3:40678000-40678019 MS.gene40985:CDS 45.0%
CGTAGGATTCTGTTCGTAAC+CGG + chr1.3:40677686-40677705 MS.gene40985:CDS 45.0%
GTCAACCGATGATTACTTGG+TGG + chr1.3:40678003-40678022 MS.gene40985:CDS 45.0%
TAATGGGGCTATTCACTGGT+TGG + chr1.3:40678159-40678178 MS.gene40985:CDS 45.0%
TGTCTATGAAATCCGGTGGA+TGG - chr1.3:40677926-40677945 None:intergenic 45.0%
TTCACTCCCTAGTGACAATG+AGG + chr1.3:40678597-40678616 MS.gene40985:CDS 45.0%
! GGAGTAGCAGTTAAGAGTGT+TGG - chr1.3:40677737-40677756 None:intergenic 45.0%
! TCTAAGTCTGTGGGCTATAG+TGG + chr1.3:40678315-40678334 MS.gene40985:CDS 45.0%
! TTCACGAAATGGGTTCCGAT+TGG + chr1.3:40678552-40678571 MS.gene40985:CDS 45.0%
!! AGCAGTTAAGAGTGTTGGAG+AGG - chr1.3:40677732-40677751 None:intergenic 45.0%
GTTGGAACAGATTGCCGTAC+TGG + chr1.3:40678472-40678491 MS.gene40985:CDS 50.0%
!! GGCTATAGTGGACGAGGATA+CGG + chr1.3:40678327-40678346 MS.gene40985:CDS 50.0%
CTGCTGCCACACACATTCGT+AGG + chr1.3:40677669-40677688 MS.gene40985:CDS 55.0%
TCATCAGGCAGATACGGTGG+TGG - chr1.3:40677527-40677546 None:intergenic 55.0%
!! TCTGTGGGCTATAGTGGACG+AGG + chr1.3:40678321-40678340 MS.gene40985:CDS 55.0%
!! AGAGGTGGCGGAGCTTATGG+CGG + chr1.3:40677493-40677512 MS.gene40985:CDS 60.0%
!! GGCAGAGGTGGCGGAGCTTA+TGG + chr1.3:40677490-40677509 MS.gene40985:CDS 65.0%
! GGCGGAGCTTATGGCGGAGG+TGG + chr1.3:40677499-40677518 MS.gene40985:CDS 70.0%
!! GGTGGCGGAGCTTATGGCGG+AGG + chr1.3:40677496-40677515 MS.gene40985:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 40677488 40678627 40677488 ID=MS.gene40985
chr1.3 mRNA 40677488 40678627 40677488 ID=MS.gene40985.t1;Parent=MS.gene40985
chr1.3 exon 40677488 40678627 40677488 ID=MS.gene40985.t1.exon1;Parent=MS.gene40985.t1
chr1.3 CDS 40677488 40678627 40677488 ID=cds.MS.gene40985.t1;Parent=MS.gene40985.t1
Gene Sequence

>MS.gene40985

ATGGCAGAGGTGGCGGAGCTTATGGCGGAGGTGGATCCACCACCGTATCTGCCTGATGAATTGATCACCAAAATCTTAGTGAGGTTACCAGTTAAGTCTCTTATTCGTTTCAAATCCGTTTCTAAGTCATGGTTTTCTCTTATCTCTGATAATCACTTTGCAATTTCACATTTTCAACTTACTGCTGCCACACACATTCGTAGGATTCTGTTCGTAACCGGAAATTCACAGTTTCATCTTTCCTCTCCAACACTCTTAACTGCTACTCCTGAATTTCGATCTATAGATTTACCGTCATTGGACGATGATTATAATGAACCTGTTCCACTGAACCCTAGTTTTTCACTTCCGGAATCTCATTTTGATCTTCAAATTAAAGGTTCATGTAGAGGGTTTATATTTTTGCACACTTGTTCAAAAGCTTATATATGGAATCCATCCACCGGATTTCATAGACAAATACCTTTCTCTCCTAGTGTTGCATATTTAATGTTTTGTGGTTTTGGGTATGACGAGTCAACCGATGATTACTTGGTGGTTTCACTTTCGTATGATTACTTGGGGTTTTTCTCATTGAGAGCTAATGAATGGGAAGAAATCGCAGATACTGTCGATTTGCCTTTTTGTAGTAGGGCCTTTTCCTTTGTCTATCCCTTAGTAGAGTCGGTCTTTAATGGGGCTATTCACTGGTTGGCTTTAAATCTTGATACATGTGACTATCTTGTTGTTGCATTTGATTTAGTGGAAAGGAAACTTGTAGAGATTCCTCTCCCAGATGATATTGACTATCGTTCTACAGATTGTGGGTTATGGGTATTTAGAGGATTTCTAAGTCTGTGGGCTATAGTGGACGAGGATACGGTTGATATATGGGTAATGAAAGAATACAAAGTGCAGTCATCTTGGGCTAAAACTCTTGTTCTTACTACTTATGATACCGTTCATGGCATTTCCCTTGTATGTTGCACAAAAAGTGGTGATATTGTTGGAACAGATTGCCGTACTGGATTGGTGAGATATGATGAGGAAGGAGAGTTTTTAGAGCATACCTACTATTGCAAAGATTCACGAAATGGGTTCCGATTGGCTATGTATACGGAGTCTTTGCTTTCACTCCCTAGTGACAATGAGGAAGCTTAA

Protein sequence

>MS.gene40985.t1

MAEVAELMAEVDPPPYLPDELITKILVRLPVKSLIRFKSVSKSWFSLISDNHFAISHFQLTAATHIRRILFVTGNSQFHLSSPTLLTATPEFRSIDLPSLDDDYNEPVPLNPSFSLPESHFDLQIKGSCRGFIFLHTCSKAYIWNPSTGFHRQIPFSPSVAYLMFCGFGYDESTDDYLVVSLSYDYLGFFSLRANEWEEIADTVDLPFCSRAFSFVYPLVESVFNGAIHWLALNLDTCDYLVVAFDLVERKLVEIPLPDDIDYRSTDCGLWVFRGFLSLWAIVDEDTVDIWVMKEYKVQSSWAKTLVLTTYDTVHGISLVCCTKSGDIVGTDCRTGLVRYDEEGEFLEHTYYCKDSRNGFRLAMYTESLLSLPSDNEEA