AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene97996


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97996.t1 MTR_2g024110 55.738 305 120 8 1 296 1 299 7.91e-103 306
MS.gene97996.t1 MTR_2g026010 56.250 304 122 5 1 295 1 302 6.02e-99 296
MS.gene97996.t1 MTR_1g068875 56.811 301 118 8 1 295 1 295 7.13e-99 296
MS.gene97996.t1 MTR_1g068835 53.846 312 134 7 1 308 1 306 8.03e-98 293
MS.gene97996.t1 MTR_2g028110 52.649 302 126 8 1 290 1 297 6.26e-91 276
MS.gene97996.t1 MTR_2g028130 48.171 328 142 7 2 303 3 328 1.23e-89 273
MS.gene97996.t1 MTR_2g031640 53.041 296 124 10 4 290 6 295 4.31e-89 271
MS.gene97996.t1 MTR_2g426090 52.117 307 119 12 7 290 9 310 3.21e-87 267
MS.gene97996.t1 MTR_1g068860 53.974 302 128 7 1 295 1 298 8.90e-87 265
MS.gene97996.t1 MTR_0667s0010 49.671 304 133 9 4 290 6 306 2.00e-83 257
MS.gene97996.t1 MTR_8g099460 51.911 314 129 8 2 299 3 310 4.49e-82 254
MS.gene97996.t1 MTR_2g425980 47.756 312 138 8 2 290 3 312 6.86e-82 253
MS.gene97996.t1 MTR_2g031720 50.799 313 135 13 1 299 1 308 3.19e-81 251
MS.gene97996.t1 MTR_2g031680 50.671 298 135 8 4 295 6 297 1.84e-80 249
MS.gene97996.t1 MTR_2g028160 46.372 317 140 8 2 290 3 317 5.06e-80 249
MS.gene97996.t1 MTR_3g083010 48.485 330 131 14 1 295 1 326 8.70e-78 243
MS.gene97996.t1 MTR_4g006270 47.097 310 134 10 1 303 1 287 7.94e-76 238
MS.gene97996.t1 MTR_2g426070 46.154 312 137 10 5 290 7 313 8.54e-74 232
MS.gene97996.t1 MTR_2g021050 45.484 310 139 9 2 299 3 294 2.12e-73 231
MS.gene97996.t1 MTR_2g028140 46.687 332 133 12 2 296 3 327 2.82e-73 231
MS.gene97996.t1 MTR_2g025420 43.114 334 157 11 2 303 3 335 9.92e-73 230
MS.gene97996.t1 MTR_2g426060 46.914 324 144 12 4 303 6 325 1.86e-72 229
MS.gene97996.t1 MTR_4g070550 46.769 325 137 11 2 296 3 321 6.14e-72 228
MS.gene97996.t1 MTR_2g426020 45.048 313 145 9 4 295 6 312 1.83e-69 221
MS.gene97996.t1 MTR_2g024100 46.667 300 139 9 19 299 22 319 9.90e-69 219
MS.gene97996.t1 MTR_2g031700 52.155 232 105 5 4 233 6 233 1.11e-67 213
MS.gene97996.t1 MTR_4g133170 42.953 298 155 8 1 291 1 290 3.21e-67 215
MS.gene97996.t1 MTR_1g068905 50.000 254 106 8 1 251 1 236 9.70e-62 199
MS.gene97996.t1 MTR_2g040050 45.607 239 100 5 65 296 15 230 2.03e-55 180
MS.gene97996.t1 MTR_2g025960 46.320 231 103 7 89 303 3 228 5.81e-54 178
MS.gene97996.t1 MTR_2g022170 60.448 134 52 1 1 134 1 133 8.99e-49 159
MS.gene97996.t1 MTR_5g083940 39.145 304 110 13 1 301 1 232 1.01e-43 152
MS.gene97996.t1 MTR_7g110360 42.347 196 99 5 1 183 36 230 9.99e-34 126
MS.gene97996.t1 MTR_2g021190 29.870 308 183 12 4 294 21 312 2.02e-32 124
MS.gene97996.t1 MTR_6g053260 31.511 311 168 13 1 288 334 622 1.04e-31 125
MS.gene97996.t1 MTR_3g006570 30.323 310 186 10 1 296 18 311 6.17e-31 119
MS.gene97996.t1 MTR_3g007330 28.440 327 185 12 4 308 48 347 9.15e-31 119
MS.gene97996.t1 MTR_7g013590 30.844 308 167 12 7 290 39 324 3.78e-30 118
MS.gene97996.t1 MTR_5g011200 29.508 305 181 11 4 290 17 305 1.72e-29 115
MS.gene97996.t1 MTR_6g004660 28.754 313 185 12 4 291 16 315 1.96e-29 115
MS.gene97996.t1 MTR_2g021150 30.719 306 178 10 4 290 14 304 5.81e-29 114
MS.gene97996.t1 MTR_3g006670 28.086 324 197 11 4 308 49 355 9.33e-29 114
MS.gene97996.t1 MTR_1g097560 30.033 303 180 13 4 296 36 316 1.48e-28 113
MS.gene97996.t1 MTR_6g053240 28.616 318 173 11 1 288 25 318 1.78e-27 110
MS.gene97996.t1 MTR_3g086970 41.885 191 68 8 1 187 1 152 2.61e-27 105
MS.gene97996.t1 MTR_1g097490 30.744 309 184 11 4 300 49 339 2.66e-27 110
MS.gene97996.t1 MTR_3g013770 30.746 335 183 16 1 308 30 342 2.89e-27 110
MS.gene97996.t1 MTR_7g407070 27.619 315 197 9 1 290 29 337 3.30e-27 110
MS.gene97996.t1 MTR_2g046900 32.026 306 175 13 4 290 28 319 3.46e-27 109
MS.gene97996.t1 MTR_5g007610 30.097 309 187 11 1 290 38 336 4.19e-27 109
MS.gene97996.t1 MTR_4g030830 28.571 329 182 11 4 295 9 321 4.77e-27 109
MS.gene97996.t1 MTR_4g061340 28.707 317 181 13 1 293 23 318 1.44e-26 107
MS.gene97996.t1 MTR_3g014540 30.794 315 168 15 4 293 29 318 1.59e-26 107
MS.gene97996.t1 MTR_2g029990 29.195 298 184 13 5 288 52 336 2.59e-26 107
MS.gene97996.t1 MTR_3g009310 28.399 331 190 14 1 308 39 345 1.66e-25 105
MS.gene97996.t1 MTR_1g056710 27.243 301 195 8 1 290 31 318 3.49e-25 104
MS.gene97996.t1 MTR_3g010390 30.380 316 184 11 1 290 30 335 4.11e-25 104
MS.gene97996.t1 MTR_3g013740 27.673 318 180 13 4 290 44 342 5.40e-25 103
MS.gene97996.t1 MTR_3g007360 28.239 301 182 10 7 290 55 338 5.89e-25 103
MS.gene97996.t1 MTR_5g022420 29.195 298 176 11 4 290 27 300 6.08e-25 103
MS.gene97996.t1 MTR_6g065980 26.115 314 198 8 4 308 16 304 8.16e-25 102
MS.gene97996.t1 MTR_3g024040 29.123 285 173 9 12 288 39 302 8.54e-25 103
MS.gene97996.t1 MTR_3g007410 28.146 302 183 10 7 291 55 339 1.30e-24 102
MS.gene97996.t1 MTR_4g130330 27.134 328 203 11 2 295 5 330 1.92e-24 102
MS.gene97996.t1 MTR_0054s0100 28.963 328 185 12 11 294 24 347 1.95e-24 102
MS.gene97996.t1 MTR_1g054725 27.063 303 187 10 4 287 20 307 2.64e-24 101
MS.gene97996.t1 MTR_3g007270 26.498 317 189 9 4 293 47 346 3.57e-24 101
MS.gene97996.t1 MTR_6g021880 28.859 298 176 11 16 290 32 316 4.26e-24 101
MS.gene97996.t1 MTR_2g037520 55.914 93 38 2 198 290 3 92 4.37e-24 96.7
MS.gene97996.t1 MTR_3g014570 29.179 329 186 15 4 308 29 334 5.20e-24 100
MS.gene97996.t1 MTR_1g088120 28.863 343 175 14 7 300 13 335 6.13e-24 101
MS.gene97996.t1 MTR_3g011100 27.653 311 187 10 4 293 235 528 6.65e-24 102
MS.gene97996.t1 MTR_5g046300 25.974 308 197 12 1 296 1 289 6.77e-24 100
MS.gene97996.t1 MTR_5g046290 25.974 308 197 12 1 296 1 289 6.77e-24 100
MS.gene97996.t1 MTR_4g116330 30.592 304 175 14 4 290 23 307 1.32e-23 99.8
MS.gene97996.t1 MTR_3g436150 27.742 310 197 8 1 290 29 331 1.50e-23 99.8
MS.gene97996.t1 MTR_5g070080 26.562 320 188 10 4 290 10 315 1.52e-23 99.8
MS.gene97996.t1 MTR_1g050542 29.630 297 174 10 4 287 58 332 1.78e-23 99.8
MS.gene97996.t1 MTR_0054s0090 27.692 325 191 12 11 294 24 345 1.93e-23 99.8
MS.gene97996.t1 MTR_3g036335 26.045 311 195 9 1 294 38 330 1.96e-23 99.4
MS.gene97996.t1 MTR_3g007430 28.479 309 172 13 6 290 45 328 2.87e-23 99.0
MS.gene97996.t1 MTR_2g078900 26.299 308 185 10 4 293 33 316 3.59e-23 98.2
MS.gene97996.t1 MTR_4g055060 26.769 325 198 11 4 308 30 334 4.62e-23 98.2
MS.gene97996.t1 MTR_5g057690 27.632 304 180 10 4 293 46 323 4.71e-23 98.2
MS.gene97996.t1 MTR_1g097330 29.605 304 187 13 4 296 16 303 5.05e-23 98.6
MS.gene97996.t1 MTR_3g024130 31.019 216 130 8 89 299 58 259 8.42e-23 96.7
MS.gene97996.t1 MTR_2g046830 31.000 300 172 14 7 290 28 308 8.71e-23 97.8
MS.gene97996.t1 MTR_6g027890 27.928 222 138 6 83 290 47 260 1.09e-22 96.3
MS.gene97996.t1 MTR_3g009260 27.848 316 192 11 7 308 44 337 1.25e-22 97.1
MS.gene97996.t1 MTR_1g055375 27.331 311 190 11 1 290 1 296 1.51e-22 96.7
MS.gene97996.t1 MTR_7g070830 25.882 340 188 11 4 290 21 349 1.55e-22 97.4
MS.gene97996.t1 MTR_3g010920 25.649 308 185 10 1 296 41 316 1.89e-22 96.7
MS.gene97996.t1 MTR_7g070880 25.278 360 203 12 4 308 21 369 2.16e-22 96.7
MS.gene97996.t1 MTR_5g057790 27.687 307 186 11 4 293 46 333 2.60e-22 96.3
MS.gene97996.t1 MTR_7g056710 27.795 331 195 11 4 308 18 330 2.98e-22 95.9
MS.gene97996.t1 MTR_7g070440 27.302 315 195 12 3 296 10 311 3.21e-22 95.9
MS.gene97996.t1 MTR_3g007300 29.043 303 156 14 1 290 46 302 4.14e-22 95.5
MS.gene97996.t1 MTR_6g013270 27.653 311 188 13 4 294 29 322 4.29e-22 95.9
MS.gene97996.t1 MTR_3g009240 28.846 312 172 16 4 293 36 319 4.41e-22 95.5
MS.gene97996.t1 MTR_4g023090 28.391 317 175 13 4 294 16 306 5.52e-22 95.1
MS.gene97996.t1 MTR_6g004210 27.302 315 174 12 17 290 38 338 6.28e-22 95.5
MS.gene97996.t1 MTR_3g083640 26.403 303 184 8 1 287 52 331 6.53e-22 95.1
MS.gene97996.t1 MTR_3g034160 27.070 314 187 14 4 291 9 306 7.73e-22 94.7
MS.gene97996.t1 MTR_3g086960 57.500 80 29 1 213 292 3 77 8.80e-22 90.1
MS.gene97996.t1 MTR_5g097330 26.250 320 193 9 11 291 23 338 9.30e-22 94.7
MS.gene97996.t1 MTR_6g079810 25.449 334 205 11 4 294 70 402 1.05e-21 95.1
MS.gene97996.t1 MTR_2g021800 26.087 345 196 13 4 293 16 356 1.33e-21 94.7
MS.gene97996.t1 MTR_3g034180 27.157 313 186 14 4 290 123 419 1.41e-21 95.1
MS.gene97996.t1 MTR_5g057710 27.937 315 175 12 4 293 46 333 1.49e-21 94.4
MS.gene97996.t1 MTR_7g017040 27.928 333 175 13 4 288 16 331 1.97e-21 94.0
MS.gene97996.t1 MTR_6g027910 25.962 312 192 13 6 290 11 310 2.75e-21 93.2
MS.gene97996.t1 MTR_0097s0030 28.190 337 178 14 7 308 17 324 3.06e-21 93.2
MS.gene97996.t1 MTR_2g047240 28.190 337 178 14 7 308 17 324 3.06e-21 93.2
MS.gene97996.t1 MTR_4g102410 23.582 335 207 11 4 295 61 389 3.15e-21 93.6
MS.gene97996.t1 MTR_1g055135 30.065 306 174 13 4 286 13 301 3.62e-21 92.8
MS.gene97996.t1 MTR_2g047892 26.113 337 180 14 4 297 22 332 3.86e-21 93.2
MS.gene97996.t1 MTR_4g031770 27.273 308 187 10 1 290 1 289 4.11e-21 92.8
MS.gene97996.t1 MTR_3g036290 26.578 301 184 10 4 293 22 296 6.19e-21 92.0
MS.gene97996.t1 MTR_3g010870 24.437 311 206 9 4 302 37 330 8.17e-21 92.0
MS.gene97996.t1 MTR_0128s0070 27.907 344 188 15 2 307 20 341 9.09e-21 92.0
MS.gene97996.t1 MTR_2g021210 27.760 317 170 10 4 294 84 367 9.89e-21 92.0
MS.gene97996.t1 MTR_8g012090 26.861 309 172 11 11 293 23 303 1.06e-20 90.9
MS.gene97996.t1 MTR_3g036430 25.168 298 186 9 1 296 17 279 1.08e-20 91.3
MS.gene97996.t1 MTR_7g078840 26.966 356 187 15 5 300 11 353 1.18e-20 92.0
MS.gene97996.t1 MTR_2g021155 28.013 307 192 14 1 293 33 324 1.61e-20 92.4
MS.gene97996.t1 MTR_2g021155 30.622 209 122 9 98 294 693 890 1.10e-18 87.0
MS.gene97996.t1 MTR_2g022000 25.220 341 199 12 4 291 16 353 1.64e-20 91.7
MS.gene97996.t1 MTR_2g046920 28.013 307 178 13 4 290 24 307 1.99e-20 90.9
MS.gene97996.t1 MTR_7g007300 27.937 315 179 10 4 298 103 389 2.97e-20 90.9
MS.gene97996.t1 MTR_3g024110 23.920 301 193 8 1 288 98 375 3.36e-20 90.9
MS.gene97996.t1 MTR_4g013180 27.219 338 182 14 5 300 12 327 3.61e-20 90.9
MS.gene97996.t1 MTR_4g030760 28.746 327 180 15 7 308 76 374 3.67e-20 90.5
MS.gene97996.t1 MTR_0760s0010 26.403 303 182 10 12 299 55 331 4.19e-20 90.1
MS.gene97996.t1 MTR_0044s0300 24.510 306 194 11 4 293 38 322 4.35e-20 90.1
MS.gene97996.t1 MTR_4g117850 29.097 299 175 12 4 284 23 302 4.96e-20 89.7
MS.gene97996.t1 MTR_4g117780 27.419 310 184 12 1 290 8 296 5.25e-20 89.4
MS.gene97996.t1 MTR_3g058470 29.022 317 151 15 1 290 34 303 5.59e-20 89.4
MS.gene97996.t1 MTR_8g101580 27.124 306 190 13 1 290 42 330 5.59e-20 89.7
MS.gene97996.t1 MTR_4g094365 28.620 297 184 10 4 286 8 290 6.58e-20 89.4
MS.gene97996.t1 MTR_7g079160 25.936 374 186 16 7 307 11 366 6.66e-20 90.1
MS.gene97996.t1 MTR_0128s0020 27.928 333 185 14 4 301 18 330 8.43e-20 89.4
MS.gene97996.t1 MTR_7g078900 26.957 345 185 16 7 300 15 343 8.49e-20 89.4
MS.gene97996.t1 MTR_6g007135 25.484 310 197 11 7 295 29 325 8.61e-20 89.0
MS.gene97996.t1 MTR_7g056570 28.125 320 184 11 4 296 18 318 8.68e-20 89.4
MS.gene97996.t1 MTR_5g046260 24.161 298 189 10 1 298 1 261 9.29e-20 87.8
MS.gene97996.t1 MTR_6g007150 29.167 240 144 10 66 295 47 270 9.29e-20 88.6
MS.gene97996.t1 MTR_4g023080 27.000 300 185 10 4 291 9 286 1.28e-19 88.2
MS.gene97996.t1 MTR_7g017130 25.758 330 189 11 3 290 17 332 1.63e-19 88.6
MS.gene97996.t1 MTR_5g009060 26.979 341 190 13 1 296 22 348 1.65e-19 88.6
MS.gene97996.t1 MTR_6g080680 24.540 326 201 9 4 294 19 334 1.72e-19 88.2
MS.gene97996.t1 MTR_3g011060 25.526 333 196 13 1 302 25 336 1.84e-19 88.2
MS.gene97996.t1 MTR_4g028660 24.085 328 207 12 4 294 16 338 1.89e-19 88.2
MS.gene97996.t1 MTR_4g027450 24.085 328 207 12 4 294 16 338 1.89e-19 88.2
MS.gene97996.t1 MTR_8g467670 26.235 324 175 15 4 288 14 312 2.01e-19 88.2
MS.gene97996.t1 MTR_7g017170 25.758 330 189 11 3 290 17 332 2.16e-19 88.2
MS.gene97996.t1 MTR_6g048120 27.157 313 190 12 4 293 36 333 2.57e-19 87.8
MS.gene97996.t1 MTR_7g056390 28.736 348 169 16 7 301 21 342 2.72e-19 87.8
MS.gene97996.t1 MTR_4g028750 25.526 333 195 13 4 294 16 337 2.89e-19 87.8
MS.gene97996.t1 MTR_3g034130 26.168 321 193 15 4 296 9 313 2.91e-19 87.4
MS.gene97996.t1 MTR_3g010430 26.074 326 181 12 1 296 33 328 2.92e-19 87.8
MS.gene97996.t1 MTR_3g010590 24.351 308 188 11 1 293 36 313 3.08e-19 87.4
MS.gene97996.t1 MTR_4g028680 25.938 320 198 14 12 295 24 340 3.46e-19 87.4
MS.gene97996.t1 MTR_4g030090 25.915 328 186 14 2 291 12 320 3.81e-19 87.4
MS.gene97996.t1 MTR_4g129190 25.826 333 189 16 3 296 5 318 4.03e-19 87.0
MS.gene97996.t1 MTR_5g069760 24.925 333 200 12 4 308 6 316 4.28e-19 87.0
MS.gene97996.t1 MTR_3g024150 25.490 306 187 8 6 293 37 319 4.33e-19 87.0
MS.gene97996.t1 MTR_7g016930 26.384 307 184 9 4 286 16 304 4.45e-19 86.7
MS.gene97996.t1 MTR_7g056290 27.378 347 175 15 7 301 25 346 4.53e-19 87.4
MS.gene97996.t1 MTR_6g014720 25.839 298 195 11 4 294 26 304 4.88e-19 87.0
MS.gene97996.t1 MTR_3g011020 25.776 322 166 11 1 290 25 305 5.23e-19 86.7
MS.gene97996.t1 MTR_3g030350 24.590 305 201 8 4 296 35 322 5.44e-19 86.7
MS.gene97996.t1 MTR_4g109280 27.609 297 188 10 4 290 8 287 5.86e-19 86.3
MS.gene97996.t1 MTR_1g094210 26.154 325 184 16 4 306 57 347 1.05e-18 86.3
MS.gene97996.t1 MTR_3g030330 24.671 304 191 9 4 293 20 299 1.07e-18 85.9
MS.gene97996.t1 MTR_0134s0060 23.743 358 217 14 4 308 12 366 1.14e-18 86.3
MS.gene97996.t1 MTR_1g094210 26.154 325 184 16 4 306 57 347 1.19e-18 85.9
MS.gene97996.t1 MTR_6g016285 25.309 324 191 10 4 288 21 332 1.24e-18 86.3
MS.gene97996.t1 MTR_2g021770 25.595 336 196 11 4 290 12 342 1.32e-18 85.9
MS.gene97996.t1 MTR_7g056820 28.615 325 182 15 4 296 7 313 1.40e-18 85.5
MS.gene97996.t1 MTR_4g122850 27.891 294 180 12 16 290 13 293 1.50e-18 85.5
MS.gene97996.t1 MTR_7g445890 23.364 321 201 11 4 301 16 314 1.54e-18 85.5
MS.gene97996.t1 MTR_5g097680 24.432 352 184 15 12 291 25 366 1.66e-18 85.9
MS.gene97996.t1 MTR_6g060650 28.296 311 185 12 4 291 8 303 1.72e-18 85.1
MS.gene97996.t1 MTR_7g078860 26.627 338 188 15 5 300 10 329 2.12e-18 85.1
MS.gene97996.t1 MTR_8g063440 24.367 316 203 10 4 291 12 319 2.17e-18 85.1
MS.gene97996.t1 MTR_4g028510 25.387 323 196 14 12 294 24 341 2.49e-18 85.5
MS.gene97996.t1 MTR_7g056503 28.963 328 192 15 4 301 21 337 2.59e-18 85.1
MS.gene97996.t1 MTR_2g437190 60.494 81 27 4 46 124 56 133 2.59e-18 80.9
MS.gene97996.t1 MTR_3g030320 24.883 213 143 4 92 304 46 241 2.80e-18 83.6
MS.gene97996.t1 MTR_7g056737 28.571 322 170 14 4 291 22 317 2.89e-18 84.7
MS.gene97996.t1 MTR_7g061090 24.779 339 190 11 4 296 22 341 3.13e-18 84.7
MS.gene97996.t1 MTR_1g015740 25.633 316 159 9 7 308 11 264 3.14e-18 84.0
MS.gene97996.t1 MTR_6g092560 27.300 337 177 16 4 296 12 324 3.15e-18 85.1
MS.gene97996.t1 MTR_1g115160 24.194 310 198 9 4 300 22 307 3.96e-18 84.3
MS.gene97996.t1 MTR_8g064890 25.392 319 189 13 12 295 24 328 4.00e-18 84.3
MS.gene97996.t1 MTR_5g097350 26.398 322 171 12 13 290 25 324 4.04e-18 84.3
MS.gene97996.t1 MTR_3g010970 24.272 309 182 9 7 296 51 326 4.16e-18 84.3
MS.gene97996.t1 MTR_4g108820 25.685 292 167 14 4 290 42 288 4.32e-18 83.6
MS.gene97996.t1 MTR_4g116340 31.628 215 119 10 7 210 39 236 4.46e-18 82.4
MS.gene97996.t1 MTR_5g070130 26.582 316 176 11 7 290 14 305 4.91e-18 84.0
MS.gene97996.t1 MTR_3g010620 26.144 306 175 11 7 295 39 310 5.21e-18 84.0
MS.gene97996.t1 MTR_1g054575 27.551 294 186 11 4 287 52 328 5.79e-18 84.7
MS.gene97996.t1 MTR_5g057020 26.645 304 178 11 4 293 46 318 6.83e-18 83.2
MS.gene97996.t1 MTR_1g071010 25.309 324 185 13 5 291 16 319 7.84e-18 83.6
MS.gene97996.t1 MTR_7g061060 25.672 335 194 12 4 302 13 328 8.19e-18 83.6
MS.gene97996.t1 MTR_5g096630 24.620 329 204 11 3 291 17 341 9.13e-18 83.6
MS.gene97996.t1 MTR_0129s0050 24.000 325 199 10 12 290 22 344 1.16e-17 83.2
MS.gene97996.t1 MTR_6g017280 22.866 328 218 12 4 305 9 327 1.16e-17 82.8
MS.gene97996.t1 MTR_4g024890 26.398 322 188 14 1 291 7 310 1.25e-17 82.8
MS.gene97996.t1 MTR_3g103020 27.541 305 186 12 4 290 20 307 1.29e-17 82.8
MS.gene97996.t1 MTR_1g053510 24.779 339 185 13 7 290 18 341 1.30e-17 82.8
MS.gene97996.t1 MTR_8g033110 26.203 374 193 14 2 308 12 369 1.37e-17 82.8
MS.gene97996.t1 MTR_2g078870 26.699 206 123 6 92 293 58 239 1.53e-17 81.6
MS.gene97996.t1 MTR_4g107820 26.471 306 186 14 2 290 34 317 2.00e-17 82.4
MS.gene97996.t1 MTR_4g107780 26.471 306 186 14 2 290 34 317 2.00e-17 82.4
MS.gene97996.t1 MTR_2g047832 26.074 326 180 13 4 290 29 332 2.03e-17 82.4
MS.gene97996.t1 MTR_4g107820 26.471 306 186 14 2 290 34 317 2.31e-17 82.4
MS.gene97996.t1 MTR_4g107780 26.471 306 186 14 2 290 34 317 2.43e-17 82.0
MS.gene97996.t1 MTR_5g070088 25.705 319 194 8 4 290 7 314 2.49e-17 82.0
MS.gene97996.t1 MTR_5g096710 28.662 314 179 13 4 287 23 321 3.29e-17 81.6
MS.gene97996.t1 MTR_0129s0070 27.273 319 182 13 12 291 25 332 5.22e-17 81.3
MS.gene97996.t1 MTR_4g117770 27.778 306 176 13 7 290 14 296 5.82e-17 80.9
MS.gene97996.t1 MTR_4g117810 27.778 306 176 13 7 290 14 296 5.82e-17 80.9
MS.gene97996.t1 MTR_2g021950 26.524 328 185 15 11 294 23 338 5.87e-17 80.9
MS.gene97996.t1 MTR_2g461450 25.402 311 187 12 7 299 21 304 7.22e-17 80.5
MS.gene97996.t1 MTR_3g010520 25.333 300 183 12 4 293 25 293 1.01e-16 80.1
MS.gene97996.t1 MTR_1g055070 27.372 274 157 11 1 242 46 309 1.05e-16 80.1
MS.gene97996.t1 MTR_3g030250 25.080 311 184 11 4 296 37 316 1.05e-16 80.1
MS.gene97996.t1 MTR_4g117750 29.299 314 191 11 4 301 3 301 1.12e-16 80.5
MS.gene97996.t1 MTR_6g086825 24.848 330 203 13 4 291 70 396 1.34e-16 80.1
MS.gene97996.t1 MTR_4g021785 27.000 300 184 11 4 290 9 286 1.37e-16 79.7
MS.gene97996.t1 MTR_8g433040 27.483 302 181 11 4 290 18 296 1.51e-16 79.7
MS.gene97996.t1 MTR_8g032380 27.483 302 181 11 4 290 18 296 1.51e-16 79.7
MS.gene97996.t1 MTR_4g006350 25.688 327 190 12 2 291 492 802 1.91e-16 80.1
MS.gene97996.t1 MTR_7g055930 24.000 350 199 14 7 300 16 354 1.93e-16 79.7
MS.gene97996.t1 MTR_7g079640 23.734 316 195 10 4 291 13 310 1.97e-16 79.3
MS.gene97996.t1 MTR_1g007410 25.382 327 196 10 4 290 22 340 2.04e-16 79.3
MS.gene97996.t1 MTR_5g096910 24.398 332 206 11 4 301 17 337 2.05e-16 79.3
MS.gene97996.t1 MTR_7g055870 26.211 351 190 16 7 300 16 354 2.29e-16 79.3
MS.gene97996.t1 MTR_4g023070 29.221 308 178 13 3 290 2 289 2.54e-16 79.0
MS.gene97996.t1 MTR_2g046860 28.641 206 133 8 88 290 6 200 2.59e-16 78.6
MS.gene97996.t1 MTR_4g109270 27.036 307 187 12 2 290 6 293 2.87e-16 78.6
MS.gene97996.t1 MTR_2g043410 24.069 349 193 12 7 308 25 348 3.08e-16 79.0
MS.gene97996.t1 MTR_4g019990 25.826 333 193 12 2 295 4 321 3.10e-16 79.0
MS.gene97996.t1 MTR_4g033495 25.444 338 193 14 2 300 25 342 3.20e-16 79.0
MS.gene97996.t1 MTR_0128s0010 25.161 310 190 12 7 287 24 320 3.56e-16 78.6
MS.gene97996.t1 MTR_7g056717 27.796 313 184 12 10 297 28 323 3.62e-16 78.6
MS.gene97996.t1 MTR_5g072060 25.970 335 189 14 4 301 6 318 3.72e-16 79.3
MS.gene97996.t1 MTR_1g055055 26.733 303 171 10 4 290 26 293 4.35e-16 78.2
MS.gene97996.t1 MTR_5g046280 23.558 208 138 8 92 296 3 192 4.49e-16 76.6
MS.gene97996.t1 MTR_8g033090 24.731 372 199 14 2 308 12 367 4.93e-16 78.6
MS.gene97996.t1 MTR_5g097220 24.629 337 184 12 11 291 20 342 6.13e-16 78.2
MS.gene97996.t1 MTR_4g023120 27.832 309 181 12 3 290 2 289 8.64e-16 77.4
MS.gene97996.t1 MTR_4g117550 24.534 322 180 12 4 291 17 309 8.93e-16 77.4
MS.gene97996.t1 MTR_3g464470 26.398 322 185 16 2 291 5 306 1.09e-15 77.0
MS.gene97996.t1 MTR_3g464500 25.532 329 190 14 2 295 25 333 1.19e-15 77.0
MS.gene97996.t1 MTR_7g050520 26.708 322 168 14 4 287 22 313 1.33e-15 77.0
MS.gene97996.t1 MTR_1g007430 25.240 313 185 13 16 294 8 305 1.57e-15 76.3
MS.gene97996.t1 MTR_5g069930 26.235 324 180 14 4 291 6 306 1.87e-15 76.6
MS.gene97996.t1 MTR_3g072470 24.719 356 182 13 7 306 22 347 1.93e-15 76.6
MS.gene97996.t1 MTR_3g030240 24.104 307 187 12 1 293 37 311 1.98e-15 76.3
MS.gene97996.t1 MTR_3g058440 26.103 272 167 8 1 251 32 290 2.36e-15 75.5
MS.gene97996.t1 MTR_7g061050 24.924 329 197 12 4 301 13 322 2.58e-15 76.3
MS.gene97996.t1 MTR_3g006640 26.697 221 123 9 90 290 19 220 2.91e-15 75.1
MS.gene97996.t1 MTR_2g066170 25.846 325 196 14 4 294 12 325 3.02e-15 75.9
MS.gene97996.t1 MTR_7g069550 22.552 337 204 10 4 294 14 339 3.03e-15 75.9
MS.gene97996.t1 MTR_7g028660 26.198 313 196 9 4 290 11 314 3.15e-15 75.9
MS.gene97996.t1 MTR_7g050480 26.814 317 174 15 4 287 22 313 4.40e-15 75.5
MS.gene97996.t1 MTR_0464s0020 25.797 345 190 16 7 301 26 354 4.54e-15 75.5
MS.gene97996.t1 MTR_1g115185 25.484 310 194 10 4 294 39 330 5.20e-15 75.5
MS.gene97996.t1 MTR_7g091630 26.822 343 191 19 4 305 32 355 5.63e-15 75.5
MS.gene97996.t1 MTR_2g034700 23.175 315 203 9 4 294 14 313 5.69e-15 75.1
MS.gene97996.t1 MTR_8g062660 26.006 323 186 16 4 296 22 321 6.14e-15 75.5
MS.gene97996.t1 MTR_4g116330 30.909 220 123 9 4 207 23 229 6.31e-15 74.7
MS.gene97996.t1 MTR_3g023930 24.262 305 179 12 4 293 34 301 6.79e-15 74.7
MS.gene97996.t1 MTR_8g013010 28.689 244 151 10 4 232 54 289 6.91e-15 74.3
MS.gene97996.t1 MTR_7g066100 24.471 331 202 12 4 296 11 331 7.37e-15 74.7
MS.gene97996.t1 MTR_7g052150 26.935 323 175 15 4 290 22 319 8.13e-15 74.7
MS.gene97996.t1 MTR_5g092850 24.367 316 197 10 12 290 24 334 1.02e-14 74.3
MS.gene97996.t1 MTR_6g055210 25.610 328 188 15 4 290 22 334 1.05e-14 74.7
MS.gene97996.t1 MTR_2g038680 23.810 336 203 13 3 290 15 345 1.16e-14 74.3
MS.gene97996.t1 MTR_7g066000 24.684 316 203 12 4 291 25 333 1.26e-14 74.3
MS.gene97996.t1 MTR_7g077970 25.369 339 202 16 7 303 10 339 1.34e-14 74.3
MS.gene97996.t1 MTR_5g068040 25.714 315 185 13 7 296 19 309 1.39e-14 73.9
MS.gene97996.t1 MTR_4g055820 23.894 339 202 15 4 295 14 343 1.93e-14 73.2
MS.gene97996.t1 MTR_3g006500 23.625 309 185 10 4 288 17 298 2.01e-14 73.6
MS.gene97996.t1 MTR_7g111700 23.625 309 186 12 11 294 22 305 2.49e-14 73.2
MS.gene97996.t1 MTR_8g013000 25.223 337 197 13 4 296 10 335 2.61e-14 73.2
MS.gene97996.t1 MTR_8g032390 27.211 294 180 12 4 290 40 306 2.81e-14 72.8
MS.gene97996.t1 MTR_2g066200 26.667 330 189 16 4 294 12 327 3.91e-14 72.8
MS.gene97996.t1 MTR_5g048160 23.373 338 208 13 1 296 1 329 4.46e-14 72.4
MS.gene97996.t1 MTR_5g043160 24.556 338 190 12 7 290 53 379 4.92e-14 72.8
MS.gene97996.t1 MTR_4g121580 28.151 238 129 8 4 212 11 235 5.19e-14 72.4
MS.gene97996.t1 MTR_0267s0050 25.153 326 194 16 7 296 9 320 5.42e-14 72.4
MS.gene97996.t1 MTR_7g067680 25.902 305 172 10 1 288 46 313 5.46e-14 72.4
MS.gene97996.t1 MTR_1g055065 23.923 209 142 6 90 290 19 218 5.75e-14 71.2
MS.gene97996.t1 MTR_4g117720 29.187 209 132 8 87 291 106 302 5.95e-14 72.0
MS.gene97996.t1 MTR_5g075370 24.012 329 193 14 9 289 14 333 6.34e-14 72.8
MS.gene97996.t1 MTR_0242s0060 23.460 341 206 13 4 302 9 336 6.58e-14 72.0
MS.gene97996.t1 MTR_0242s0040 23.460 341 206 13 4 302 9 336 6.58e-14 72.0
MS.gene97996.t1 MTR_8g054320 25.714 315 140 8 1 308 29 256 9.60e-14 70.9
MS.gene97996.t1 MTR_2g435950 26.923 208 134 7 89 293 46 238 1.02e-13 70.9
MS.gene97996.t1 MTR_7g062060 26.149 348 187 18 4 299 12 341 1.13e-13 71.2
MS.gene97996.t1 MTR_4g030790 24.026 308 171 13 4 291 19 283 1.21e-13 70.9
MS.gene97996.t1 MTR_7g056260 24.691 324 181 11 7 291 17 316 1.22e-13 70.5
MS.gene97996.t1 MTR_1g057890 26.809 235 131 8 63 290 87 287 1.37e-13 70.9
MS.gene97996.t1 MTR_8g033140 23.143 350 192 13 4 291 19 353 1.39e-13 71.2
MS.gene97996.t1 MTR_1g058190 25.309 324 187 12 1 303 32 321 1.44e-13 70.9
MS.gene97996.t1 MTR_1004s0010 25.481 208 130 7 92 299 119 301 1.53e-13 70.9
MS.gene97996.t1 MTR_2g065840 26.582 316 190 15 12 294 20 326 1.60e-13 70.9
MS.gene97996.t1 MTR_3g080370 23.899 318 191 12 18 296 35 340 1.60e-13 70.9
MS.gene97996.t1 MTR_7g056760 25.234 321 200 13 4 292 23 335 1.66e-13 70.9
MS.gene97996.t1 MTR_8g063370 23.920 301 201 10 12 291 32 325 1.74e-13 70.9
MS.gene97996.t1 MTR_5g043605 24.104 307 175 12 4 300 25 283 1.85e-13 70.5
MS.gene97996.t1 MTR_3g058480 28.030 264 151 11 1 239 36 285 1.96e-13 70.1
MS.gene97996.t1 MTR_8g066440 25.373 335 192 17 5 296 24 343 2.13e-13 70.5
MS.gene97996.t1 MTR_7g035295 22.393 326 184 10 7 299 19 308 2.19e-13 70.5
MS.gene97996.t1 MTR_4g014370 24.561 342 197 13 4 291 11 345 2.26e-13 70.5
MS.gene97996.t1 MTR_7g066030 24.233 326 198 10 4 291 21 335 2.85e-13 70.1
MS.gene97996.t1 MTR_0649s0020 24.691 324 177 17 4 284 11 310 2.87e-13 70.1
MS.gene97996.t1 MTR_4g008790 25.429 350 151 15 23 300 58 369 3.03e-13 70.1
MS.gene97996.t1 MTR_3g010450 26.050 238 157 6 8 239 1 225 3.32e-13 68.6
MS.gene97996.t1 MTR_2g047878 24.834 302 189 13 4 291 21 298 3.47e-13 69.7
MS.gene97996.t1 MTR_8g046310 25.817 306 185 13 12 291 24 313 3.67e-13 69.7
MS.gene97996.t1 MTR_2g010950 23.894 339 209 15 4 306 20 345 5.00e-13 69.3
MS.gene97996.t1 MTR_7g060940 24.316 329 180 14 4 290 22 323 5.16e-13 69.3
MS.gene97996.t1 MTR_7g066060 24.159 327 194 13 4 291 23 334 5.88e-13 69.3
MS.gene97996.t1 MTR_3g010870 24.528 212 141 5 4 206 37 238 7.26e-13 68.6
MS.gene97996.t1 MTR_4g023440 23.920 301 162 10 4 291 18 264 8.02e-13 68.6
MS.gene97996.t1 MTR_5g056020 25.893 336 192 14 4 290 17 344 8.87e-13 68.9
MS.gene97996.t1 MTR_5g027330 23.148 324 193 11 2 288 38 342 9.09e-13 68.9
MS.gene97996.t1 MTR_5g027370 23.148 324 193 11 2 288 27 331 1.01e-12 68.6
MS.gene97996.t1 MTR_7g066080 24.332 337 181 15 4 291 16 327 1.17e-12 68.6
MS.gene97996.t1 MTR_4g118380 26.087 299 182 11 17 286 21 309 1.19e-12 68.2
MS.gene97996.t1 MTR_6g090250 24.296 284 155 15 61 295 92 364 1.38e-12 68.2
MS.gene97996.t1 MTR_5g024260 25.538 325 194 15 4 288 22 338 2.19e-12 67.4
MS.gene97996.t1 MTR_7g110370 68.085 47 14 1 249 295 31 76 2.81e-12 65.5
MS.gene97996.t1 MTR_5g010550 23.615 343 200 13 3 290 43 378 2.88e-12 67.4
MS.gene97996.t1 MTR_5g010550 23.615 343 200 13 3 290 57 392 3.49e-12 67.0
MS.gene97996.t1 MTR_1g007450 25.225 333 200 13 4 295 12 336 5.14e-12 66.2
MS.gene97996.t1 MTR_3g437520 25.140 358 179 16 7 301 26 357 5.63e-12 66.2
MS.gene97996.t1 MTR_5g010610 25.146 342 193 14 3 290 33 365 5.93e-12 66.6
MS.gene97996.t1 MTR_7g066840 24.854 342 188 16 4 304 23 336 6.35e-12 66.2
MS.gene97996.t1 MTR_7g062100 23.653 334 202 12 4 304 24 337 6.41e-12 66.2
MS.gene97996.t1 MTR_7g057270 24.324 333 202 14 4 298 26 346 6.49e-12 66.2
MS.gene97996.t1 MTR_5g068490 27.358 212 130 10 87 294 27 218 7.69e-12 65.1
MS.gene97996.t1 MTR_4g030980 22.438 361 200 13 4 298 15 361 7.72e-12 65.9
MS.gene97996.t1 MTR_5g064700 23.938 259 160 10 69 291 50 307 8.45e-12 65.5
MS.gene97996.t1 MTR_7g077910 25.103 243 128 11 89 302 42 259 8.53e-12 65.5
MS.gene97996.t1 MTR_2g104340 21.752 331 213 14 4 295 14 337 1.00e-11 65.5
MS.gene97996.t1 MTR_8g063350 23.986 296 175 15 12 293 22 281 1.30e-11 64.7
MS.gene97996.t1 MTR_4g030110 22.674 344 187 14 4 305 30 336 1.34e-11 65.1
MS.gene97996.t1 MTR_4g013175 25.434 346 176 15 23 307 29 353 1.82e-11 64.7
MS.gene97996.t1 MTR_7g050490 30.500 200 97 9 4 182 8 186 2.27e-11 62.4
MS.gene97996.t1 MTR_3g011650 27.041 196 125 6 1 188 76 261 3.03e-11 63.2
MS.gene97996.t1 MTR_3g009250 29.319 191 114 6 7 188 44 222 3.04e-11 62.8
MS.gene97996.t1 MTR_8g102520 25.641 195 118 9 105 288 72 250 3.12e-11 63.5
MS.gene97996.t1 MTR_7g066010 25.362 276 150 10 4 236 21 283 4.08e-11 63.5
MS.gene97996.t1 MTR_1g061330 24.000 325 184 13 1 291 1 296 5.65e-11 63.2
MS.gene97996.t1 MTR_6g079790 23.904 251 158 11 64 290 3 244 6.08e-11 62.8
MS.gene97996.t1 MTR_8g063330 22.156 334 196 12 4 291 14 329 8.43e-11 62.8
MS.gene97996.t1 MTR_5g022900 22.430 214 149 6 83 290 170 372 9.94e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97996.t1 AT4G12560 33.226 310 180 11 1 290 1 303 4.59e-38 139
MS.gene97996.t1 AT4G12560 33.226 310 180 11 1 290 1 303 4.59e-38 139
MS.gene97996.t1 AT4G12560 33.226 310 180 11 1 290 1 303 4.59e-38 139
MS.gene97996.t1 AT4G22390 29.260 311 183 12 1 288 1 297 9.86e-26 105
MS.gene97996.t1 AT4G22390 29.260 311 183 12 1 288 1 297 1.25e-25 105
MS.gene97996.t1 AT3G07870 26.316 323 188 11 1 291 25 329 2.30e-23 99.8
MS.gene97996.t1 AT3G06240 27.219 338 174 15 4 287 36 355 8.54e-20 89.4
MS.gene97996.t1 AT3G16210 24.333 300 189 11 4 295 5 274 1.12e-13 71.2
MS.gene97996.t1 AT3G23880 23.418 316 195 12 3 294 13 305 1.48e-13 70.9
MS.gene97996.t1 AT5G10340 25.316 316 180 16 12 290 78 374 1.85e-11 64.7
MS.gene97996.t1 AT3G23260 23.826 298 202 9 4 290 6 289 1.86e-11 64.7
MS.gene97996.t1 AT1G32600 29.762 168 91 9 45 207 1 146 6.15e-11 62.4

Find 82 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATTAACGAATTTGCTTTC+TGG 0.167972 2.3:-42902457 MS.gene97996:CDS
AATAATTGATGTTTCACTTT+TGG 0.213077 2.3:-42902021 MS.gene97996:CDS
AAGTTTGTATGGCGGCATTC+TGG 0.216132 2.3:+42902208 None:intergenic
TGGTGTAAACTGTTCACTTT+GGG 0.255376 2.3:-42901912 MS.gene97996:CDS
TTAGCTGCAACTCCTATTTC+AGG 0.270266 2.3:+42902056 None:intergenic
CCTATCAGGCTTTACAATAA+AGG 0.303188 2.3:-42902527 MS.gene97996:CDS
TTAAAGCCAACCTTCCTATC+AGG 0.312625 2.3:-42902541 MS.gene97996:CDS
TTGACATCTTTAAAGCCTTT+AGG 0.314996 2.3:-42901866 MS.gene97996:CDS
TTAAAGCTACTGGTTAGGTT+AGG 0.326906 2.3:+42902560 None:intergenic
GAAATCGATTCGGTAGAAAT+TGG 0.332194 2.3:+42902583 None:intergenic
ATCCTATGTTTACGGGTGTT+AGG 0.334496 2.3:+42902431 None:intergenic
TTGTTGATAATTGTCTCCAC+TGG 0.348698 2.3:-42902166 MS.gene97996:CDS
CTATGAATTCTCAGTGTGTT+TGG 0.368697 2.3:-42901965 MS.gene97996:CDS
AGTTTGTATGGCGGCATTCT+GGG 0.376926 2.3:+42902209 None:intergenic
CCTTTATTGTAAAGCCTGAT+AGG 0.378869 2.3:+42902527 None:intergenic
CTCCAATTGCACACAGTTCA+CGG 0.381318 2.3:-42902362 MS.gene97996:CDS
GAAGTAGTGGGATTCGATTA+AGG 0.391480 2.3:+42902664 None:intergenic
CGGGGAGGGATAGGGAGATA+AGG 0.392615 2.3:+42902404 None:intergenic
TCCTATGTTTACGGGTGTTA+GGG 0.401664 2.3:+42902432 None:intergenic
AGCAAATTCGTTAATGCAGT+TGG 0.405931 2.3:+42902463 None:intergenic
AAGGGATAATCCTATGTTTA+CGG 0.407645 2.3:+42902423 None:intergenic
GAGGTTCCTCTTCCTGAAAT+AGG 0.408915 2.3:-42902068 MS.gene97996:CDS
AGGGATAATCCTATGTTTAC+GGG 0.420404 2.3:+42902424 None:intergenic
TAAAGCTACTGGTTAGGTTA+GGG 0.421378 2.3:+42902561 None:intergenic
GTAGAGATTCTACTGGTAAG+AGG 0.423815 2.3:+42902720 None:intergenic
TCTTCAGAGCGGGGAGGGAT+AGG 0.424984 2.3:+42902395 None:intergenic
AAGGTTGGCTTTAAAGCTAC+TGG 0.425439 2.3:+42902550 None:intergenic
TGGCTTTAAAGCTACTGGTT+AGG 0.431523 2.3:+42902555 None:intergenic
GTTTGAGAACAAAGTTTGTA+TGG 0.433634 2.3:+42902197 None:intergenic
GGAGAATGAGGTTGAAATTG+AGG 0.436630 2.3:+42902618 None:intergenic
AACAAGTGCGGTCTTGTCTA+TGG 0.445832 2.3:+42902282 None:intergenic
CTTCAGAGCGGGGAGGGATA+GGG 0.447095 2.3:+42902396 None:intergenic
AACCGTGAACTGTGTGCAAT+TGG 0.449142 2.3:+42902360 None:intergenic
TTGGTGTAAACTGTTCACTT+TGG 0.460026 2.3:-42901913 MS.gene97996:CDS
AATAAAGGCATCGATCTTCT+CGG 0.461668 2.3:-42902512 MS.gene97996:CDS
ATTCTACTGGTAAGAGGGAG+AGG 0.469668 2.3:+42902726 None:intergenic
TATGAATTCTCAGTGTGTTT+GGG 0.469691 2.3:-42901964 MS.gene97996:CDS
GTTTGGGTGATGAAAGAGTA+TGG 0.483351 2.3:-42901948 MS.gene97996:CDS
GGGGAGGGATAGGGAGATAA+GGG 0.486786 2.3:+42902405 None:intergenic
GTAAAGCCTGATAGGAAGGT+TGG 0.497854 2.3:+42902535 None:intergenic
TAGAGATTCTACTGGTAAGA+GGG 0.502660 2.3:+42902721 None:intergenic
TTCCTATGGCTGATATTCCA+TGG 0.504306 2.3:-42902766 None:intergenic
GAGAATGAGGTTGAAATTGA+GGG 0.504724 2.3:+42902619 None:intergenic
AGACAATTATCAACAAATAC+AGG 0.505205 2.3:+42902173 None:intergenic
GATCTTCTCGGTTCATGCAA+CGG 0.511749 2.3:-42902500 MS.gene97996:CDS
ACTAACAAGTTTATAATCGC+TGG 0.511874 2.3:+42902319 None:intergenic
AGTATGGAGTTAGAGATAGT+TGG 0.526267 2.3:-42901932 MS.gene97996:CDS
TTAGGTTAGGGAAATCGATT+CGG 0.528192 2.3:+42902573 None:intergenic
TATTGTAAAGCCTGATAGGA+AGG 0.540780 2.3:+42902531 None:intergenic
GATTTCATATTCTTCAGAGC+GGG 0.547988 2.3:+42902385 None:intergenic
TCCTATGGCTGATATTCCAT+GGG 0.548983 2.3:-42902765 None:intergenic
AGAAATTGGAGCGGTTGCGA+AGG 0.557781 2.3:+42902597 None:intergenic
CATATTCTTCAGAGCGGGGA+GGG 0.559433 2.3:+42902390 None:intergenic
GTGAAGGTTGATGAAGTAGT+GGG 0.560744 2.3:+42902652 None:intergenic
AAATAATGTTGAATCTGACC+TGG 0.569814 2.3:+42902128 None:intergenic
AGCGGTTGCGAAGGAGAATG+AGG 0.569924 2.3:+42902606 None:intergenic
GCAACTCCTATTTCAGGAAG+AGG 0.570934 2.3:+42902062 None:intergenic
GTGTAAACTGTTCACTTTGG+GGG 0.579049 2.3:-42901910 MS.gene97996:CDS
TGTTGATAATTGTCTCCACT+GGG 0.581975 2.3:-42902165 MS.gene97996:CDS
GGGAGAGTGTCTTTGTATGA+CGG 0.587802 2.3:-42902000 MS.gene97996:CDS
CTGTCACTAGAATAACCTAA+AGG 0.589093 2.3:+42901851 None:intergenic
AACACGAGAGATTCTCAATG+AGG 0.591504 2.3:-42902087 MS.gene97996:CDS
AAAGGCTTTAAAGATGTCAA+AGG 0.591536 2.3:+42901869 None:intergenic
TGTAAACTGTTCACTTTGGG+GGG 0.591540 2.3:-42901909 MS.gene97996:CDS
GGAGTTGCAGCTAACAAACA+TGG 0.594409 2.3:-42902047 MS.gene97996:CDS
CGTGAACTGTGTGCAATTGG+AGG 0.595104 2.3:+42902363 None:intergenic
TGGGTTGAATTTCAGAAACC+AGG 0.597390 2.3:-42902146 MS.gene97996:CDS
GGTGTAAACTGTTCACTTTG+GGG 0.614185 2.3:-42901911 MS.gene97996:CDS
GGTGAAGGTTGATGAAGTAG+TGG 0.622411 2.3:+42902651 None:intergenic
ATTACTGTGAATAACTCCCA+TGG 0.623496 2.3:+42902749 None:intergenic
ACCCTAACACCCGTAAACAT+AGG 0.627833 2.3:-42902433 MS.gene97996:CDS
TACCAGTAGAATCTCTACTC+CGG 0.634635 2.3:-42902715 MS.gene97996:CDS
TCCCATGGAATATCAGCCAT+AGG 0.637488 2.3:+42902764 None:intergenic
AACCGGAGTAGAGATTCTAC+TGG 0.637988 2.3:+42902713 None:intergenic
TGAGAACAAAGTTTGTATGG+CGG 0.642788 2.3:+42902200 None:intergenic
GTTTCTGAAATTCAACCCAG+TGG 0.648516 2.3:+42902150 None:intergenic
ATTTCATATTCTTCAGAGCG+GGG 0.652358 2.3:+42902386 None:intergenic
TCATATTCTTCAGAGCGGGG+AGG 0.654821 2.3:+42902389 None:intergenic
GGATTTCATATTCTTCAGAG+CGG 0.679013 2.3:+42902384 None:intergenic
TCACCTGTGTGTAACAAGTG+CGG 0.701213 2.3:+42902270 None:intergenic
AGACCGCACTTGTTACACAC+AGG 0.701815 2.3:-42902273 MS.gene97996:CDS
CGATTCGGTAGAAATTGGAG+CGG 0.713528 2.3:+42902588 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATTGATGTTTCACTTT+TGG - chr2.3:42902597-42902616 MS.gene97996:CDS 20.0%
!!! ATAATTGATGTTTCACTTTT+GGG - chr2.3:42902598-42902617 MS.gene97996:CDS 20.0%
! AGACAATTATCAACAAATAC+AGG + chr2.3:42902448-42902467 None:intergenic 25.0%
AAATAATGTTGAATCTGACC+TGG + chr2.3:42902493-42902512 None:intergenic 30.0%
AAGGGATAATCCTATGTTTA+CGG + chr2.3:42902198-42902217 None:intergenic 30.0%
ACTAACAAGTTTATAATCGC+TGG + chr2.3:42902302-42902321 None:intergenic 30.0%
GTTTGAGAACAAAGTTTGTA+TGG + chr2.3:42902424-42902443 None:intergenic 30.0%
TATGAATTCTCAGTGTGTTT+GGG - chr2.3:42902654-42902673 MS.gene97996:CDS 30.0%
!! AAAGGCTTTAAAGATGTCAA+AGG + chr2.3:42902752-42902771 None:intergenic 30.0%
!! TAAGGTTCGAATTGATTTTG+AGG + chr2.3:42901939-42901958 None:intergenic 30.0%
!! TTGACATCTTTAAAGCCTTT+AGG - chr2.3:42902752-42902771 MS.gene97996:CDS 30.0%
!!! GAATTGATTTTGAGGTTGAA+CGG + chr2.3:42901931-42901950 None:intergenic 30.0%
AGCAAATTCGTTAATGCAGT+TGG + chr2.3:42902158-42902177 None:intergenic 35.0%
AGGGATAATCCTATGTTTAC+GGG + chr2.3:42902197-42902216 None:intergenic 35.0%
AGTATGGAGTTAGAGATAGT+TGG - chr2.3:42902686-42902705 MS.gene97996:CDS 35.0%
ATTACTGTGAATAACTCCCA+TGG + chr2.3:42901872-42901891 None:intergenic 35.0%
ATTTCATATTCTTCAGAGCG+GGG + chr2.3:42902235-42902254 None:intergenic 35.0%
CCTATCAGGCTTTACAATAA+AGG - chr2.3:42902091-42902110 MS.gene97996:CDS 35.0%
CCTTTATTGTAAAGCCTGAT+AGG + chr2.3:42902094-42902113 None:intergenic 35.0%
CTATGAATTCTCAGTGTGTT+TGG - chr2.3:42902653-42902672 MS.gene97996:CDS 35.0%
GAGAATGAGGTTGAAATTGA+GGG + chr2.3:42902002-42902021 None:intergenic 35.0%
GATTTCATATTCTTCAGAGC+GGG + chr2.3:42902236-42902255 None:intergenic 35.0%
GGATTTCATATTCTTCAGAG+CGG + chr2.3:42902237-42902256 None:intergenic 35.0%
TAGAGATTCTACTGGTAAGA+GGG + chr2.3:42901900-42901919 None:intergenic 35.0%
TATTGTAAAGCCTGATAGGA+AGG + chr2.3:42902090-42902109 None:intergenic 35.0%
TGAGAACAAAGTTTGTATGG+CGG + chr2.3:42902421-42902440 None:intergenic 35.0%
TGGTGTAAACTGTTCACTTT+GGG - chr2.3:42902706-42902725 MS.gene97996:CDS 35.0%
TTAGGTTAGGGAAATCGATT+CGG + chr2.3:42902048-42902067 None:intergenic 35.0%
TTGGTGTAAACTGTTCACTT+TGG - chr2.3:42902705-42902724 MS.gene97996:CDS 35.0%
! GCATTAACGAATTTGCTTTC+TGG - chr2.3:42902161-42902180 MS.gene97996:CDS 35.0%
! TAAAGCTACTGGTTAGGTTA+GGG + chr2.3:42902060-42902079 None:intergenic 35.0%
! TTAAAGCTACTGGTTAGGTT+AGG + chr2.3:42902061-42902080 None:intergenic 35.0%
!! AATAAAGGCATCGATCTTCT+CGG - chr2.3:42902106-42902125 MS.gene97996:CDS 35.0%
!! GAAATCGATTCGGTAGAAAT+TGG + chr2.3:42902038-42902057 None:intergenic 35.0%
!! TGAAATTGAGGGAGTTTTGT+AGG + chr2.3:42901991-42902010 None:intergenic 35.0%
!! TGTTGATAATTGTCTCCACT+GGG - chr2.3:42902453-42902472 MS.gene97996:CDS 35.0%
!! TTGTTGATAATTGTCTCCAC+TGG - chr2.3:42902452-42902471 MS.gene97996:CDS 35.0%
AACACGAGAGATTCTCAATG+AGG - chr2.3:42902531-42902550 MS.gene97996:CDS 40.0%
ATCCTATGTTTACGGGTGTT+AGG + chr2.3:42902190-42902209 None:intergenic 40.0%
GGAGAATGAGGTTGAAATTG+AGG + chr2.3:42902003-42902022 None:intergenic 40.0%
GGTGTAAACTGTTCACTTTG+GGG - chr2.3:42902707-42902726 MS.gene97996:CDS 40.0%
GTAGAGATTCTACTGGTAAG+AGG + chr2.3:42901901-42901920 None:intergenic 40.0%
GTGTAAACTGTTCACTTTGG+GGG - chr2.3:42902708-42902727 MS.gene97996:CDS 40.0%
GTTTGGGTGATGAAAGAGTA+TGG - chr2.3:42902670-42902689 MS.gene97996:CDS 40.0%
TACCAGTAGAATCTCTACTC+CGG - chr2.3:42901903-42901922 MS.gene97996:CDS 40.0%
TCAGCTCAAAAACAAACTCG+TGG - chr2.3:42902377-42902396 MS.gene97996:CDS 40.0%
TCCTATGTTTACGGGTGTTA+GGG + chr2.3:42902189-42902208 None:intergenic 40.0%
TGTAAACTGTTCACTTTGGG+GGG - chr2.3:42902709-42902728 MS.gene97996:CDS 40.0%
TTAAAGCCAACCTTCCTATC+AGG - chr2.3:42902077-42902096 MS.gene97996:CDS 40.0%
TTAGCTGCAACTCCTATTTC+AGG + chr2.3:42902565-42902584 None:intergenic 40.0%
! GAAGTAGTGGGATTCGATTA+AGG + chr2.3:42901957-42901976 None:intergenic 40.0%
! TGGGTTGAATTTCAGAAACC+AGG - chr2.3:42902472-42902491 MS.gene97996:CDS 40.0%
!! AAGGTTGGCTTTAAAGCTAC+TGG + chr2.3:42902071-42902090 None:intergenic 40.0%
!! GTGAAGGTTGATGAAGTAGT+GGG + chr2.3:42901969-42901988 None:intergenic 40.0%
!! GTTTCTGAAATTCAACCCAG+TGG + chr2.3:42902471-42902490 None:intergenic 40.0%
!! TGGCTTTAAAGCTACTGGTT+AGG + chr2.3:42902066-42902085 None:intergenic 40.0%
!!! ATTTTGAGGTTGAACGGAAC+CGG + chr2.3:42901925-42901944 None:intergenic 40.0%
AACCGGAGTAGAGATTCTAC+TGG + chr2.3:42901908-42901927 None:intergenic 45.0%
AACCGTGAACTGTGTGCAAT+TGG + chr2.3:42902261-42902280 None:intergenic 45.0%
AAGTTTGTATGGCGGCATTC+TGG + chr2.3:42902413-42902432 None:intergenic 45.0%
ACCCTAACACCCGTAAACAT+AGG - chr2.3:42902185-42902204 MS.gene97996:CDS 45.0%
AGTTTGTATGGCGGCATTCT+GGG + chr2.3:42902412-42902431 None:intergenic 45.0%
ATTCTACTGGTAAGAGGGAG+AGG + chr2.3:42901895-42901914 None:intergenic 45.0%
CTCCAATTGCACACAGTTCA+CGG - chr2.3:42902256-42902275 MS.gene97996:CDS 45.0%
GAGGTTCCTCTTCCTGAAAT+AGG - chr2.3:42902550-42902569 MS.gene97996:CDS 45.0%
GATCTTCTCGGTTCATGCAA+CGG - chr2.3:42902118-42902137 MS.gene97996:CDS 45.0%
GCAACTCCTATTTCAGGAAG+AGG + chr2.3:42902559-42902578 None:intergenic 45.0%
GGAGTTGCAGCTAACAAACA+TGG - chr2.3:42902571-42902590 MS.gene97996:CDS 45.0%
GTAAAGCCTGATAGGAAGGT+TGG + chr2.3:42902086-42902105 None:intergenic 45.0%
TCACCTGTGTGTAACAAGTG+CGG + chr2.3:42902351-42902370 None:intergenic 45.0%
! AACAAGTGCGGTCTTGTCTA+TGG + chr2.3:42902339-42902358 None:intergenic 45.0%
!! CGATTCGGTAGAAATTGGAG+CGG + chr2.3:42902033-42902052 None:intergenic 45.0%
!! CGGTTTCGCTTTTGATCAGT+TGG - chr2.3:42902276-42902295 MS.gene97996:CDS 45.0%
!! GGGAGAGTGTCTTTGTATGA+CGG - chr2.3:42902618-42902637 MS.gene97996:CDS 45.0%
!! GGTGAAGGTTGATGAAGTAG+TGG + chr2.3:42901970-42901989 None:intergenic 45.0%
!! TGAGGGAGTTTTGTAGGTGA+AGG + chr2.3:42901985-42902004 None:intergenic 45.0%
AGAAATTGGAGCGGTTGCGA+AGG + chr2.3:42902024-42902043 None:intergenic 50.0%
CATATTCTTCAGAGCGGGGA+GGG + chr2.3:42902231-42902250 None:intergenic 50.0%
CGTGAACTGTGTGCAATTGG+AGG + chr2.3:42902258-42902277 None:intergenic 50.0%
TCATATTCTTCAGAGCGGGG+AGG + chr2.3:42902232-42902251 None:intergenic 50.0%
! ACTGTTCACTTTGGGGGGAA+TGG - chr2.3:42902714-42902733 MS.gene97996:CDS 50.0%
! AGACCGCACTTGTTACACAC+AGG - chr2.3:42902345-42902364 MS.gene97996:CDS 50.0%
AGCGGTTGCGAAGGAGAATG+AGG + chr2.3:42902015-42902034 None:intergenic 55.0%
GGGGAGGGATAGGGAGATAA+GGG + chr2.3:42902216-42902235 None:intergenic 55.0%
CGGGGAGGGATAGGGAGATA+AGG + chr2.3:42902217-42902236 None:intergenic 60.0%
CTTCAGAGCGGGGAGGGATA+GGG + chr2.3:42902225-42902244 None:intergenic 60.0%
TCTTCAGAGCGGGGAGGGAT+AGG + chr2.3:42902226-42902245 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 42901857 42902783 42901857 ID=MS.gene97996
chr2.3 mRNA 42901857 42902783 42901857 ID=MS.gene97996.t1;Parent=MS.gene97996
chr2.3 exon 42901857 42902783 42901857 ID=MS.gene97996.t1.exon1;Parent=MS.gene97996.t1
chr2.3 CDS 42901857 42902783 42901857 ID=cds.MS.gene97996.t1;Parent=MS.gene97996.t1
Gene Sequence

>MS.gene97996

ATGGCTGATATTCCATGGGAGTTATTCACAGTAATCCTCTCCCTCTTACCAGTAGAATCTCTACTCCGGTTCCGTTCAACCTCAAAATCAATTCGAACCTTAATCGAATCCCACTACTTCATCAACCTTCACCTACAAAACTCCCTCAATTTCAACCTCATTCTCCTTCGCAACCGCTCCAATTTCTACCGAATCGATTTCCCTAACCTAACCAGTAGCTTTAAAGCCAACCTTCCTATCAGGCTTTACAATAAAGGCATCGATCTTCTCGGTTCATGCAACGGTGTCATCTGCATCTCCAACTGCATTAACGAATTTGCTTTCTGGAACCCTAACACCCGTAAACATAGGATTATCCCTTATCTCCCTATCCCTCCCCGCTCTGAAGAATATGAAATCCTCCAATTGCACACAGTTCACGGTTTCGCTTTTGATCAGTTGGCCAGCGATTATAAACTTGTTAGTATCTCACTTTTCTACCATAGACAAGACCGCACTTGTTACACACAGGTGAGACTCTTCAGCTCAAAAACAAACTCGTGGAGAATGCTTCCCAGAATGCCGCCATACAAACTTTGTTCTCAAACTCCTGTATTTGTTGATAATTGTCTCCACTGGGTTGAATTTCAGAAACCAGGTCAGATTCAACATTATTTAATCGTCGCGTTTAAGTTAACACGAGAGATTCTCAATGAGGTTCCTCTTCCTGAAATAGGAGTTGCAGCTAACAAACATGGATTAATAATTGATGTTTCACTTTTGGGAGAGTGTCTTTGTATGACGGTGAATTATAATACTATGAATTCTCAGTGTGTTTGGGTGATGAAAGAGTATGGAGTTAGAGATAGTTGGTGTAAACTGTTCACTTTGGGGGGAATGGCATTTCAATGCACCTTTGACATCTTTAAAGCCTTTAGGTTATTCTAG

Protein sequence

>MS.gene97996.t1

MADIPWELFTVILSLLPVESLLRFRSTSKSIRTLIESHYFINLHLQNSLNFNLILLRNRSNFYRIDFPNLTSSFKANLPIRLYNKGIDLLGSCNGVICISNCINEFAFWNPNTRKHRIIPYLPIPPRSEEYEILQLHTVHGFAFDQLASDYKLVSISLFYHRQDRTCYTQVRLFSSKTNSWRMLPRMPPYKLCSQTPVFVDNCLHWVEFQKPGQIQHYLIVAFKLTREILNEVPLPEIGVAANKHGLIIDVSLLGECLCMTVNYNTMNSQCVWVMKEYGVRDSWCKLFTLGGMAFQCTFDIFKAFRLF