AlfalfaGEDB | MS.gene58240

M. sativa cultivar XinJiangDaYe / MS.gene58240

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58240.t1	AET02110.2	82.3	130	23	0	1	130	235	364	5.20E-54	220.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58240.t1	G7LCP3	82.3	130	23	0	1	130	235	364	3.7e-54	220.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene019504	MS.gene58240	PPI
MS.gene51207	MS.gene58240	PPI
MS.gene50311	MS.gene58240	PPI
MS.gene059096	MS.gene58240	PPI
MS.gene57528	MS.gene58240	PPI
MS.gene50297	MS.gene58240	PPI
MS.gene58240	MS.gene50305	PPI
MS.gene006711	MS.gene58240	PPI
MS.gene58240	MS.gene032969	PPI
MS.gene27285	MS.gene58240	PPI
MS.gene58716	MS.gene58240	PPI
MS.gene68580	MS.gene58240	PPI
MS.gene033444	MS.gene58240	PPI
MS.gene019505	MS.gene58240	PPI
MS.gene053257	MS.gene58240	PPI
MS.gene58785	MS.gene58240	PPI
MS.gene58240	MS.gene42445	PPI
MS.gene034690	MS.gene58240	PPI
MS.gene024009	MS.gene58240	PPI
MS.gene066639	MS.gene58240	PPI
MS.gene26949	MS.gene58240	PPI
MS.gene51189	MS.gene58240	PPI
MS.gene036599	MS.gene58240	PPI
MS.gene044426	MS.gene58240	PPI
MS.gene85454	MS.gene58240	PPI
MS.gene96407	MS.gene58240	PPI
MS.gene036558	MS.gene58240	PPI
MS.gene50309	MS.gene58240	PPI
MS.gene036760	MS.gene58240	PPI
MS.gene58240	MS.gene63657	PPI
MS.gene77857	MS.gene58240	PPI
MS.gene58240	MS.gene023996	PPI
MS.gene27022	MS.gene58240	PPI
MS.gene58311	MS.gene58240	PPI
MS.gene43790	MS.gene58240	PPI
MS.gene57527	MS.gene58240	PPI
MS.gene51191	MS.gene58240	PPI
MS.gene58240	MS.gene045473	PPI
MS.gene033426	MS.gene58240	PPI
MS.gene035237	MS.gene58240	PPI
MS.gene016220	MS.gene58240	PPI
MS.gene064086	MS.gene58240	PPI
MS.gene034681	MS.gene58240	PPI
MS.gene034677	MS.gene58240	PPI
MS.gene50298	MS.gene58240	PPI
MS.gene036584	MS.gene58240	PPI
MS.gene67687	MS.gene58240	PPI
MS.gene035261	MS.gene58240	PPI
MS.gene063670	MS.gene58240	PPI
MS.gene27319	MS.gene58240	PPI
MS.gene066626	MS.gene58240	PPI
MS.gene019506	MS.gene58240	PPI
MS.gene006705	MS.gene58240	PPI
MS.gene058692	MS.gene58240	PPI
MS.gene033083	MS.gene58240	PPI
MS.gene69309	MS.gene58240	PPI
MS.gene63658	MS.gene58240	PPI
MS.gene024002	MS.gene58240	PPI
MS.gene036581	MS.gene58240	PPI
MS.gene035263	MS.gene58240	PPI
MS.gene57538	MS.gene58240	PPI
MS.gene034686	MS.gene58240	PPI
MS.gene40982	MS.gene58240	PPI
MS.gene070461	MS.gene58240	PPI
MS.gene003076	MS.gene58240	PPI
MS.gene58315	MS.gene58240	PPI
MS.gene058703	MS.gene58240	PPI
MS.gene87557	MS.gene58240	PPI
MS.gene030114	MS.gene58240	PPI
MS.gene036662	MS.gene58240	PPI
MS.gene036663	MS.gene58240	PPI
MS.gene87563	MS.gene58240	PPI
MS.gene033431	MS.gene58240	PPI
MS.gene064109	MS.gene58240	PPI
MS.gene24212	MS.gene58240	PPI
MS.gene58240	MS.gene024009	PPI
MS.gene58240	MS.gene036599	PPI
MS.gene041475	MS.gene58240	PPI
MS.gene58240	MS.gene006705	PPI
MS.gene40988	MS.gene58240	PPI
MS.gene81242	MS.gene58240	PPI
MS.gene27283	MS.gene58240	PPI
MS.gene64203	MS.gene58240	PPI
MS.gene045140	MS.gene58240	PPI
MS.gene024004	MS.gene58240	PPI
MS.gene42444	MS.gene58240	PPI
MS.gene58240	MS.gene38220	PPI
MS.gene51202	MS.gene58240	PPI
MS.gene44428	MS.gene58240	PPI
MS.gene059101	MS.gene58240	PPI
MS.gene87562	MS.gene58240	PPI
MS.gene041391	MS.gene58240	PPI
MS.gene58240	MS.gene058696	PPI
MS.gene58240	MS.gene009893	PPI
MS.gene26829	MS.gene58240	PPI
MS.gene064104	MS.gene58240	PPI
MS.gene40878	MS.gene58240	PPI
MS.gene36595	MS.gene58240	PPI
MS.gene51201	MS.gene58240	PPI
MS.gene88416	MS.gene58240	PPI
MS.gene033443	MS.gene58240	PPI
MS.gene035234	MS.gene58240	PPI
MS.gene54049	MS.gene58240	PPI
MS.gene50337	MS.gene58240	PPI
MS.gene43789	MS.gene58240	PPI
MS.gene061240	MS.gene58240	PPI
MS.gene50332	MS.gene58240	PPI
MS.gene072177	MS.gene58240	PPI
MS.gene58722	MS.gene58240	PPI
MS.gene064091	MS.gene58240	PPI
MS.gene064112	MS.gene58240	PPI
MS.gene045476	MS.gene58240	PPI
MS.gene24208	MS.gene58240	PPI
MS.gene061241	MS.gene58240	PPI
MS.gene50307	MS.gene58240	PPI
MS.gene24213	MS.gene58240	PPI
MS.gene43796	MS.gene58240	PPI
MS.gene044429	MS.gene58240	PPI
MS.gene58240	MS.gene041391	PPI
MS.gene58312	MS.gene58240	PPI
MS.gene51199	MS.gene58240	PPI
MS.gene24173	MS.gene58240	PPI
MS.gene58313	MS.gene58240	PPI
MS.gene066622	MS.gene58240	PPI
MS.gene44887	MS.gene58240	PPI
MS.gene85043	MS.gene58240	PPI
MS.gene39265	MS.gene58240	PPI
MS.gene033430	MS.gene58240	PPI
MS.gene58240	MS.gene40984	PPI
MS.gene036583	MS.gene58240	PPI
MS.gene58240	MS.gene016220	PPI
MS.gene88780	MS.gene58240	PPI
MS.gene87588	MS.gene58240	PPI
MS.gene055694	MS.gene58240	PPI
MS.gene58314	MS.gene58240	PPI
MS.gene045473	MS.gene58240	PPI
MS.gene71159	MS.gene58240	PPI
MS.gene96448	MS.gene58240	PPI
MS.gene77858	MS.gene58240	PPI
MS.gene041392	MS.gene58240	PPI
MS.gene58317	MS.gene58240	PPI
MS.gene069075	MS.gene58240	PPI
MS.gene033081	MS.gene58240	PPI
MS.gene58240	MS.gene27284	PPI
MS.gene58240	MS.gene034680	PPI
MS.gene40985	MS.gene58240	PPI
MS.gene031591	MS.gene58240	PPI
MS.gene50301	MS.gene58240	PPI
MS.gene035262	MS.gene58240	PPI
MS.gene58321	MS.gene58240	PPI
MS.gene041388	MS.gene58240	PPI
MS.gene064108	MS.gene58240	PPI
MS.gene062698	MS.gene58240	PPI
MS.gene57536	MS.gene58240	PPI
MS.gene96126	MS.gene58240	PPI
MS.gene019503	MS.gene58240	PPI
MS.gene016524	MS.gene58240	PPI
MS.gene87559	MS.gene58240	PPI
MS.gene50304	MS.gene58240	PPI
MS.gene041473	MS.gene58240	PPI
MS.gene50336	MS.gene58240	PPI
MS.gene58240	MS.gene033442	PPI
MS.gene59943	MS.gene58240	PPI
MS.gene31587	MS.gene58240	PPI
MS.gene041393	MS.gene58240	PPI
MS.gene033441	MS.gene58240	PPI
MS.gene063474	MS.gene58240	PPI
MS.gene048193	MS.gene58240	PPI
MS.gene023996	MS.gene58240	PPI
MS.gene063826	MS.gene58240	PPI
MS.gene060367	MS.gene58240	PPI
MS.gene58240	MS.gene041489	PPI
MS.gene44892	MS.gene58240	PPI
MS.gene036664	MS.gene58240	PPI
MS.gene58240	MS.gene024000	PPI
MS.gene58239	MS.gene58240	PPI
MS.gene023999	MS.gene58240	PPI
MS.gene066641	MS.gene58240	PPI
MS.gene024011	MS.gene58240	PPI
MS.gene000038	MS.gene58240	PPI
MS.gene57531	MS.gene58240	PPI
MS.gene064111	MS.gene58240	PPI
MS.gene87584	MS.gene58240	PPI
MS.gene67501	MS.gene58240	PPI
MS.gene39262	MS.gene58240	PPI
MS.gene58241	MS.gene58240	PPI
MS.gene58240	MS.gene035238	PPI
MS.gene053256	MS.gene58240	PPI
MS.gene025887	MS.gene58240	PPI
MS.gene019507	MS.gene58240	PPI
MS.gene045474	MS.gene58240	PPI
MS.gene75875	MS.gene58240	PPI
MS.gene041470	MS.gene58240	PPI
MS.gene058694	MS.gene58240	PPI
MS.gene064090	MS.gene58240	PPI
MS.gene024979	MS.gene58240	PPI
MS.gene058701	MS.gene58240	PPI
MS.gene27284	MS.gene58240	PPI
MS.gene58240	MS.gene80610	PPI
MS.gene058989	MS.gene58240	PPI
MS.gene032969	MS.gene58240	PPI
MS.gene000036	MS.gene58240	PPI
MS.gene015089	MS.gene58240	PPI
MS.gene006710	MS.gene58240	PPI
MS.gene90743	MS.gene58240	PPI
MS.gene011679	MS.gene58240	PPI
MS.gene87554	MS.gene58240	PPI
MS.gene033079	MS.gene58240	PPI
MS.gene64001	MS.gene58240	PPI
MS.gene57533	MS.gene58240	PPI
MS.gene51190	MS.gene58240	PPI
MS.gene36704	MS.gene58240	PPI
MS.gene032970	MS.gene58240	PPI
MS.gene035238	MS.gene58240	PPI
MS.gene58240	MS.gene27319	PPI
MS.gene77856	MS.gene58240	PPI
MS.gene24826	MS.gene58240	PPI
MS.gene57532	MS.gene58240	PPI
MS.gene036556	MS.gene58240	PPI
MS.gene68890	MS.gene58240	PPI
MS.gene40887	MS.gene58240	PPI
MS.gene80610	MS.gene58240	PPI
MS.gene034688	MS.gene58240	PPI
MS.gene51188	MS.gene58240	PPI
MS.gene58240	MS.gene064083	PPI
MS.gene63655	MS.gene58240	PPI
MS.gene44883	MS.gene58240	PPI
MS.gene060366	MS.gene58240	PPI
MS.gene047279	MS.gene58240	PPI
MS.gene48221	MS.gene58240	PPI
MS.gene58240	MS.gene024008	PPI
MS.gene41046	MS.gene58240	PPI
MS.gene063472	MS.gene58240	PPI
MS.gene017412	MS.gene58240	PPI
MS.gene57529	MS.gene58240	PPI
MS.gene024000	MS.gene58240	PPI
MS.gene80884	MS.gene58240	PPI
MS.gene50320	MS.gene58240	PPI
MS.gene51192	MS.gene58240	PPI
MS.gene87585	MS.gene58240	PPI
MS.gene58240	MS.gene28758	PPI
MS.gene009883	MS.gene58240	PPI
MS.gene42445	MS.gene58240	PPI
MS.gene041395	MS.gene58240	PPI
MS.gene40886	MS.gene58240	PPI
MS.gene40902	MS.gene58240	PPI
MS.gene044563	MS.gene58240	PPI
MS.gene033427	MS.gene58240	PPI
MS.gene03060	MS.gene58240	PPI
MS.gene27051	MS.gene58240	PPI
MS.gene060368	MS.gene58240	PPI
MS.gene041474	MS.gene58240	PPI
MS.gene77704	MS.gene58240	PPI
MS.gene058696	MS.gene58240	PPI
MS.gene27020	MS.gene58240	PPI
MS.gene066620	MS.gene58240	PPI
MS.gene035236	MS.gene58240	PPI
MS.gene50305	MS.gene58240	PPI
MS.gene86273	MS.gene58240	PPI
MS.gene059157	MS.gene58240	PPI
MS.gene51208	MS.gene58240	PPI
MS.gene28758	MS.gene58240	PPI
MS.gene045475	MS.gene58240	PPI
MS.gene88776	MS.gene58240	PPI
MS.gene009893	MS.gene58240	PPI
MS.gene35068	MS.gene58240	PPI
MS.gene041390	MS.gene58240	PPI
MS.gene90744	MS.gene58240	PPI
MS.gene51204	MS.gene58240	PPI
MS.gene58783	MS.gene58240	PPI
MS.gene058693	MS.gene58240	PPI
MS.gene036557	MS.gene58240	PPI
MS.gene50329	MS.gene58240	PPI
MS.gene070462	MS.gene58240	PPI
MS.gene31637	MS.gene58240	PPI
MS.gene57537	MS.gene58240	PPI
MS.gene42447	MS.gene58240	PPI
MS.gene034762	MS.gene58240	PPI
MS.gene064114	MS.gene58240	PPI
MS.gene059156	MS.gene58240	PPI
MS.gene58240	MS.gene058703	PPI
MS.gene84698	MS.gene58240	PPI
MS.gene041468	MS.gene58240	PPI
MS.gene009891	MS.gene58240	PPI
MS.gene82082	MS.gene58240	PPI
MS.gene22715	MS.gene58240	PPI
MS.gene50306	MS.gene58240	PPI
MS.gene90742	MS.gene58240	PPI
MS.gene58316	MS.gene58240	PPI
MS.gene38220	MS.gene58240	PPI
MS.gene58240	MS.gene22715	PPI
MS.gene57535	MS.gene58240	PPI
MS.gene012215	MS.gene58240	PPI
MS.gene024008	MS.gene58240	PPI
MS.gene87200	MS.gene58240	PPI
MS.gene58240	MS.gene36595	PPI
MS.gene58319	MS.gene58240	PPI
MS.gene058669	MS.gene58240	PPI
MS.gene59637	MS.gene58240	PPI
MS.gene26830	MS.gene58240	PPI
MS.gene033432	MS.gene58240	PPI
MS.gene58240	MS.gene061240	PPI
MS.gene044425	MS.gene58240	PPI
MS.gene041489	MS.gene58240	PPI
MS.gene59639	MS.gene58240	PPI
MS.gene44885	MS.gene58240	PPI
MS.gene031590	MS.gene58240	PPI
MS.gene060370	MS.gene58240	PPI
MS.gene58240	MS.gene50311	PPI
MS.gene50327	MS.gene58240	PPI
MS.gene066635	MS.gene58240	PPI
MS.gene58240	MS.gene035234	PPI
MS.gene58240	MS.gene058989	PPI
MS.gene58240	MS.gene57538	PPI
MS.gene58240	MS.gene041468	PPI
MS.gene010758	MS.gene58240	PPI
MS.gene96406	MS.gene58240	PPI
MS.gene87586	MS.gene58240	PPI
MS.gene57530	MS.gene58240	PPI
MS.gene50326	MS.gene58240	PPI
MS.gene42451	MS.gene58240	PPI
MS.gene51200	MS.gene58240	PPI
MS.gene50339	MS.gene58240	PPI
MS.gene54541	MS.gene58240	PPI
MS.gene046958	MS.gene58240	PPI
MS.gene58240	MS.gene044425	PPI
MS.gene87564	MS.gene58240	PPI
MS.gene88774	MS.gene58240	PPI
MS.gene42452	MS.gene58240	PPI
MS.gene58240	MS.gene24173	PPI
MS.gene40986	MS.gene58240	PPI
MS.gene063414	MS.gene58240	PPI
MS.gene58240	MS.gene27022	PPI
MS.gene69307	MS.gene58240	PPI
MS.gene009892	MS.gene58240	PPI
MS.gene57526	MS.gene58240	PPI
MS.gene58240	MS.gene023999	PPI
MS.gene021553	MS.gene58240	PPI
MS.gene051820	MS.gene58240	PPI
MS.gene26957	MS.gene58240	PPI
MS.gene033875	MS.gene58240	PPI
MS.gene97996	MS.gene58240	PPI
MS.gene036582	MS.gene58240	PPI
MS.gene27021	MS.gene58240	PPI
MS.gene034680	MS.gene58240	PPI
MS.gene035235	MS.gene58240	PPI
MS.gene58320	MS.gene58240	PPI
MS.gene26101	MS.gene58240	PPI
MS.gene066120	MS.gene58240	PPI
MS.gene63657	MS.gene58240	PPI
MS.gene053299	MS.gene58240	PPI
MS.gene041394	MS.gene58240	PPI
MS.gene58240	MS.gene000036	PPI
MS.gene58781	MS.gene58240	PPI
MS.gene57717	MS.gene58240	PPI
MS.gene57525	MS.gene58240	PPI
MS.gene028390	MS.gene58240	PPI
MS.gene011106	MS.gene58240	PPI
MS.gene033440	MS.gene58240	PPI
MS.gene58240	MS.gene50320	PPI
MS.gene62398	MS.gene58240	PPI
MS.gene60027	MS.gene58240	PPI
MS.gene44886	MS.gene58240	PPI
MS.gene064083	MS.gene58240	PPI
MS.gene066623	MS.gene58240	PPI
MS.gene038756	MS.gene58240	PPI
MS.gene40904	MS.gene58240	PPI
MS.gene24286	MS.gene58240	PPI
MS.gene40984	MS.gene58240	PPI
MS.gene92376	MS.gene58240	PPI
MS.gene033442	MS.gene58240	PPI
MS.gene000035	MS.gene58240	PPI
MS.gene024420	MS.gene58240	PPI
MS.gene87569	MS.gene58240	PPI
MS.gene87573	MS.gene58240	PPI
MS.gene041491	MS.gene58240	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58240.t1	MTR_8g433040	82.308	130	23	0	1	130	235	364	5.52e-70	214
MS.gene58240.t1	MTR_8g032380	82.308	130	23	0	1	130	235	364	5.52e-70	214
MS.gene58240.t1	MTR_8g433030	79.200	125	25	1	1	124	212	336	7.63e-65	200
MS.gene58240.t1	MTR_8g032390	79.200	125	25	1	1	124	245	369	1.72e-64	200
MS.gene58240.t1	MTR_4g094365	64.925	134	43	2	1	130	231	364	6.71e-50	162
MS.gene58240.t1	MTR_3g103020	63.433	134	44	3	1	130	246	378	1.79e-49	162
MS.gene58240.t1	MTR_4g109270	60.448	134	48	3	1	130	232	364	3.00e-46	153
MS.gene58240.t1	MTR_4g116320	61.538	130	45	2	1	126	126	254	3.67e-45	147
MS.gene58240.t1	MTR_6g060650	58.647	133	48	4	1	129	243	372	1.38e-43	146
MS.gene58240.t1	MTR_4g122850	62.687	134	45	4	1	130	232	364	2.23e-43	146
MS.gene58240.t1	MTR_5g097210	60.156	128	47	2	2	127	235	360	2.44e-42	143
MS.gene58240.t1	MTR_4g117720	58.647	133	43	4	1	124	242	371	5.01e-42	142
MS.gene58240.t1	MTR_8g040935	56.716	134	53	2	2	130	75	208	8.02e-42	137
MS.gene58240.t1	MTR_4g116330	56.296	135	54	2	1	130	246	380	1.68e-41	141
MS.gene58240.t1	MTR_1g055175	53.030	132	58	2	1	129	70	200	1.41e-40	134
MS.gene58240.t1	MTR_4g109280	58.088	136	47	6	1	130	228	359	1.60e-40	138
MS.gene58240.t1	MTR_4g023130	58.015	131	51	3	1	129	184	312	1.17e-39	135
MS.gene58240.t1	MTR_3g034180	58.647	133	49	4	1	130	360	489	1.91e-39	138
MS.gene58240.t1	MTR_4g117850	56.693	127	49	3	2	123	248	373	1.16e-38	134
MS.gene58240.t1	MTR_1g055165	52.632	133	59	2	1	130	187	318	1.26e-38	132
MS.gene58240.t1	MTR_4g023080	55.725	131	54	3	1	129	225	353	1.33e-38	133
MS.gene58240.t1	MTR_4g021785	54.545	132	56	3	1	130	226	355	4.02e-38	132
MS.gene58240.t1	MTR_4g023380	51.282	156	49	5	1	130	225	379	2.05e-37	130
MS.gene58240.t1	MTR_4g118360	55.469	128	48	5	8	129	1	125	4.96e-37	122
MS.gene58240.t1	MTR_4g118370	53.488	129	55	3	1	127	132	257	9.30e-37	126
MS.gene58240.t1	MTR_4g023090	52.857	140	49	5	1	124	240	378	1.78e-36	128
MS.gene58240.t1	MTR_6g463430	53.383	133	55	4	1	130	74	202	1.95e-36	124
MS.gene58240.t1	MTR_1g055135	51.825	137	57	4	1	130	241	375	5.48e-36	127
MS.gene58240.t1	MTR_4g023070	51.049	143	54	3	2	129	228	369	1.67e-35	125
MS.gene58240.t1	MTR_4g117870	52.344	128	58	2	5	130	141	267	4.51e-35	122
MS.gene58240.t1	MTR_5g070130	54.264	129	53	4	1	124	243	370	6.58e-35	124
MS.gene58240.t1	MTR_5g070080	54.331	127	52	4	2	124	255	379	2.09e-34	122
MS.gene58240.t1	MTR_1g055195	53.788	132	46	5	1	124	348	472	4.76e-34	123
MS.gene58240.t1	MTR_3g034160	56.489	131	53	3	1	129	246	374	1.89e-32	117
MS.gene58240.t1	MTR_4g023120	48.611	144	58	3	2	130	228	370	2.45e-32	117
MS.gene58240.t1	MTR_1g055250	48.872	133	62	3	2	130	140	270	3.59e-32	115
MS.gene58240.t1	MTR_4g118380	57.895	114	34	4	1	103	245	355	7.49e-32	115
MS.gene58240.t1	MTR_3g034130	54.167	120	50	3	1	117	246	363	7.68e-32	115
MS.gene58240.t1	MTR_4g117780	55.357	112	47	2	22	130	256	367	1.01e-31	115
MS.gene58240.t1	MTR_4g117750	54.386	114	49	2	18	128	368	481	1.03e-31	117
MS.gene58240.t1	MTR_4g117750	48.624	109	51	3	23	129	253	358	9.42e-24	95.1
MS.gene58240.t1	MTR_4g117770	55.357	112	47	2	22	130	256	367	1.46e-31	115
MS.gene58240.t1	MTR_4g117810	55.357	112	47	2	22	130	256	367	1.46e-31	115
MS.gene58240.t1	MTR_4g023190	52.206	136	54	4	1	128	225	357	1.70e-31	114
MS.gene58240.t1	MTR_5g023000	59.596	99	37	2	35	130	1	99	1.05e-30	105
MS.gene58240.t1	MTR_4g023150	50.000	136	57	4	1	128	226	358	1.66e-29	109
MS.gene58240.t1	MTR_4g023200	49.265	136	58	4	1	128	226	358	6.66e-29	107
MS.gene58240.t1	MTR_4g122860	50.000	128	54	4	10	130	196	320	2.97e-28	105
MS.gene58240.t1	MTR_4g116330	53.097	113	48	2	23	130	229	341	7.72e-28	104
MS.gene58240.t1	MTR_4g121580	50.847	118	49	3	4	120	230	339	3.02e-27	103
MS.gene58240.t1	MTR_4g023440	61.957	92	32	2	41	130	242	332	3.45e-27	102
MS.gene58240.t1	MTR_5g070088	46.667	135	67	4	1	130	252	386	3.74e-27	103
MS.gene58240.t1	MTR_4g117530	49.153	118	56	3	14	130	139	253	4.90e-27	100
MS.gene58240.t1	MTR_7g079400	45.652	138	63	5	2	130	203	337	1.12e-25	99.0
MS.gene58240.t1	MTR_8g102520	44.030	134	67	4	2	130	192	322	5.21e-25	97.1
MS.gene58240.t1	MTR_4g118400	49.219	128	44	6	2	124	183	294	7.19e-24	93.6
MS.gene58240.t1	MTR_7g079450	41.912	136	63	5	2	130	11	137	2.64e-23	88.6
MS.gene58240.t1	MTR_7g079370	45.669	127	62	4	2	124	227	350	3.32e-22	90.1
MS.gene58240.t1	MTR_8g098830	43.200	125	63	5	2	124	97	215	2.53e-21	85.5
MS.gene58240.t1	MTR_4g023430	46.667	105	48	3	33	130	119	222	9.27e-21	84.0
MS.gene58240.t1	MTR_4g122840	41.085	129	39	4	5	130	170	264	1.76e-17	76.3
MS.gene58240.t1	MTR_4g114700	50.000	88	38	3	40	121	131	218	3.57e-17	75.1
MS.gene58240.t1	MTR_7g117720	55.172	87	30	4	46	124	186	271	9.97e-17	74.3
MS.gene58240.t1	MTR_4g023100	48.718	78	37	1	53	130	45	119	2.09e-13	62.4
MS.gene58240.t1	MTR_8g013005	59.649	57	21	1	76	130	3	59	6.24e-13	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 29 sgRNAs with CRISPR-Local

Find 33 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACCATGATCCTAAGTATTA+TGG	0.203715	8.4:-64263239	MS.gene58240:CDS
TATTATGGTTTGTGGGTATT+TGG	0.206725	8.4:-64263224	MS.gene58240:CDS
ATAATCCGGCACTTGAAATA+TGG	0.211797	8.4:-64263169	MS.gene58240:CDS
TTGGAGAATTTCTCAGTCTA+TGG	0.288501	8.4:-64263205	MS.gene58240:CDS
ATGGCCACTTCAAATGCCTT+TGG	0.385262	8.4:+64262960	None:intergenic
CAAGGTATGTCATTGTCAAT+AGG	0.400804	8.4:+64263095	None:intergenic
GGATCATGGTTGAAATCATC+TGG	0.411154	8.4:+64263251	None:intergenic
ATCCTAAGTATTATGGTTTG+TGG	0.419854	8.4:-64263232	MS.gene58240:CDS
TAATCCGGCACTTGAAATAT+GGG	0.448185	8.4:-64263168	MS.gene58240:CDS
ATTGGAACTGGTGGTCATCA+TGG	0.466146	8.4:-64263035	MS.gene58240:CDS
AATACAAACTGAAATCATCT+TGG	0.466347	8.4:-64263136	MS.gene58240:CDS
ATCACCCATATTTCAAGTGC+CGG	0.473975	8.4:+64263164	None:intergenic
AGTGGTGATATTATTGGAAC+TGG	0.479168	8.4:-64263047	MS.gene58240:CDS
TCCTAAGTATTATGGTTTGT+GGG	0.484785	8.4:-64263231	MS.gene58240:CDS
AACCATAATACTTAGGATCA+TGG	0.502897	8.4:+64263237	None:intergenic
CTATTGACAATGACATACCT+TGG	0.516935	8.4:-64263094	MS.gene58240:CDS
TTGTCTTTGATTTAATGGAA+AGG	0.526787	8.4:-64263295	None:intergenic
ACCCACAAACCATAATACTT+AGG	0.570029	8.4:+64263230	None:intergenic
TGGTTGAAATCATCTGGAAG+AGG	0.588065	8.4:+64263257	None:intergenic
AACTGGTGGTCATCATGGAT+TGG	0.588954	8.4:-64263030	MS.gene58240:CDS
CATCTTGTTAAACTTGCTCA+CGG	0.601761	8.4:+64262904	None:intergenic
AAGCAGAGACTCTTTATACA+TGG	0.605588	8.4:+64262941	None:intergenic
GAATCCAAAGGCATTTGAAG+TGG	0.606386	8.4:-64262964	MS.gene58240:CDS
GCATCTCAAAATGAATCCAA+AGG	0.611920	8.4:-64262976	MS.gene58240:CDS
TAAACTTGCTCACGGTCACG+AGG	0.626552	8.4:+64262912	None:intergenic
TTGGTGAAGTATAATAACAA+AGG	0.635362	8.4:-64263011	MS.gene58240:CDS
GGTGATATTATTGGAACTGG+TGG	0.654879	8.4:-64263044	MS.gene58240:CDS
AAACTTGCTCACGGTCACGA+GGG	0.700858	8.4:+64262913	None:intergenic
GAGTATATAGGGGAAAACCA+AGG	0.732405	8.4:+64263077	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GAATATGAATTTTCATAATC+CGG	-	chr8.4:64263009-64263028	MS.gene58240:CDS	20.0%
!	AATACAAACTGAAATCATCT+TGG	-	chr8.4:64263056-64263075	MS.gene58240:CDS	25.0%
!	ACAAAAAGTGGTGATATTAT+TGG	-	chr8.4:64263139-64263158	MS.gene58240:CDS	25.0%
!	TTGGTGAAGTATAATAACAA+AGG	-	chr8.4:64263181-64263200	MS.gene58240:CDS	25.0%
!!	ACTTTTTGTAGAGTATATAG+GGG	+	chr8.4:64263128-64263147	None:intergenic	25.0%
!!!	CACTTTTTGTAGAGTATATA+GGG	+	chr8.4:64263129-64263148	None:intergenic	25.0%
	AACCATAATACTTAGGATCA+TGG	+	chr8.4:64262958-64262977	None:intergenic	30.0%
	AACCATGATCCTAAGTATTA+TGG	-	chr8.4:64262953-64262972	MS.gene58240:CDS	30.0%
	ATCCTAAGTATTATGGTTTG+TGG	-	chr8.4:64262960-64262979	MS.gene58240:CDS	30.0%
	CCTATATACTCTACAAAAAG+TGG	-	chr8.4:64263127-64263146	MS.gene58240:CDS	30.0%
!	TATTATGGTTTGTGGGTATT+TGG	-	chr8.4:64262968-64262987	MS.gene58240:CDS	30.0%
!	TCCTAAGTATTATGGTTTGT+GGG	-	chr8.4:64262961-64262980	MS.gene58240:CDS	30.0%
!!!	CCACTTTTTGTAGAGTATAT+AGG	+	chr8.4:64263130-64263149	None:intergenic	30.0%
	AAGCAGAGACTCTTTATACA+TGG	+	chr8.4:64263254-64263273	None:intergenic	35.0%
	ACCCACAAACCATAATACTT+AGG	+	chr8.4:64262965-64262984	None:intergenic	35.0%
	AGTGGTGATATTATTGGAAC+TGG	-	chr8.4:64263145-64263164	MS.gene58240:CDS	35.0%
	ATAATCCGGCACTTGAAATA+TGG	-	chr8.4:64263023-64263042	MS.gene58240:CDS	35.0%
	CAAGGTATGTCATTGTCAAT+AGG	+	chr8.4:64263100-64263119	None:intergenic	35.0%
	CTATTGACAATGACATACCT+TGG	-	chr8.4:64263098-64263117	MS.gene58240:CDS	35.0%
	GCATCTCAAAATGAATCCAA+AGG	-	chr8.4:64263216-64263235	MS.gene58240:CDS	35.0%
	TAATCCGGCACTTGAAATAT+GGG	-	chr8.4:64263024-64263043	MS.gene58240:CDS	35.0%
	TTGGAGAATTTCTCAGTCTA+TGG	-	chr8.4:64262987-64263006	MS.gene58240:CDS	35.0%
	GAGTATATAGGGGAAAACCA+AGG	+	chr8.4:64263118-64263137	None:intergenic	40.0%
	GGATCATGGTTGAAATCATC+TGG	+	chr8.4:64262944-64262963	None:intergenic	40.0%
	GGTGATATTATTGGAACTGG+TGG	-	chr8.4:64263148-64263167	MS.gene58240:CDS	40.0%
	TGGTTGAAATCATCTGGAAG+AGG	+	chr8.4:64262938-64262957	None:intergenic	40.0%
!	ATCACCCATATTTCAAGTGC+CGG	+	chr8.4:64263031-64263050	None:intergenic	40.0%
!!	GAATCCAAAGGCATTTGAAG+TGG	-	chr8.4:64263228-64263247	MS.gene58240:CDS	40.0%
	AACTGGTGGTCATCATGGAT+TGG	-	chr8.4:64263162-64263181	MS.gene58240:CDS	45.0%
	ATGGCCACTTCAAATGCCTT+TGG	+	chr8.4:64263235-64263254	None:intergenic	45.0%
	ATTGGAACTGGTGGTCATCA+TGG	-	chr8.4:64263157-64263176	MS.gene58240:CDS	45.0%
!	AAACTTGCTCACGGTCACGA+GGG	+	chr8.4:64263282-64263301	None:intergenic	50.0%
!	TAAACTTGCTCACGGTCACG+AGG	+	chr8.4:64263283-64263302	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	64262911	64263303	64262911	ID=MS.gene58240
chr8.4	mRNA	64262911	64263303	64262911	ID=MS.gene58240.t1;Parent=MS.gene58240
chr8.4	exon	64262911	64263303	64262911	ID=MS.gene58240.t1.exon1;Parent=MS.gene58240.t1
chr8.4	CDS	64262911	64263303	64262911	ID=cds.MS.gene58240.t1;Parent=MS.gene58240.t1

Gene Sequence

>MS.gene58240

ATGGAAAGGAAACTGTTAGAGATACCTCTTCCAGATGATTTCAACCATGATCCTAAGTATTATGGTTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGAATATGAATTTTCATAATCCGGCACTTGAAATATGGGTGATGAAAGAATACAAACTGAAATCATCTTGGACTAAGACTCTTGTAATTCCTATTGACAATGACATACCTTGGTTTTCCCCTATATACTCTACAAAAAGTGGTGATATTATTGGAACTGGTGGTCATCATGGATTGGTGAAGTATAATAACAAAGGACAACTTTTAGAGCATCTCAAAATGAATCCAAAGGCATTTGAAGTGGCCATGTATAAAGAGTCTCTGCTTTCACTCCCTCGTGACCGTGAGCAAGTTTAA

Protein sequence

>MS.gene58240.t1

MERKLLEIPLPDDFNHDPKYYGLWVFGEFLSLWNMNFHNPALEIWVMKEYKLKSSWTKTLVIPIDNDIPWFSPIYSTKSGDIIGTGGHHGLVKYNNKGQLLEHLKMNPKAFEVAMYKESLLSLPRDREQV