AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058701


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058701.t1 MTR_7g079400 68.621 290 83 2 84 365 48 337 1.03e-135 390
MS.gene058701.t1 MTR_8g102520 57.453 369 106 7 1 365 1 322 3.47e-132 381
MS.gene058701.t1 MTR_2g048580 53.826 379 124 13 1 365 1 342 3.37e-116 341
MS.gene058701.t1 MTR_7g079370 52.187 343 144 5 37 363 16 354 1.04e-102 307
MS.gene058701.t1 MTR_5g070080 44.416 394 176 13 3 365 5 386 2.79e-87 268
MS.gene058701.t1 MTR_5g070088 43.367 392 177 12 3 361 2 381 4.12e-87 268
MS.gene058701.t1 MTR_4g109280 47.043 372 177 10 1 365 1 359 7.27e-87 266
MS.gene058701.t1 MTR_6g060650 44.503 382 184 9 1 364 1 372 1.57e-86 266
MS.gene058701.t1 MTR_3g103020 44.652 374 180 12 6 365 18 378 1.26e-84 261
MS.gene058701.t1 MTR_3g034180 45.078 386 178 13 1 364 115 488 1.70e-83 262
MS.gene058701.t1 MTR_3g034130 44.915 354 172 10 2 338 3 350 7.82e-83 256
MS.gene058701.t1 MTR_4g109270 45.119 379 179 12 1 365 1 364 1.28e-82 256
MS.gene058701.t1 MTR_5g070130 43.272 379 187 12 1 361 4 372 6.72e-82 255
MS.gene058701.t1 MTR_4g094365 42.857 378 189 11 1 365 1 364 9.81e-81 251
MS.gene058701.t1 MTR_4g023080 45.067 375 173 14 1 364 1 353 5.20e-80 249
MS.gene058701.t1 MTR_3g034160 44.241 382 187 12 1 364 1 374 5.58e-80 249
MS.gene058701.t1 MTR_7g079450 83.824 136 22 0 230 365 2 137 6.02e-80 241
MS.gene058701.t1 MTR_4g116330 43.200 375 189 10 3 365 18 380 8.41e-79 246
MS.gene058701.t1 MTR_4g023070 43.377 385 172 15 8 364 3 369 1.24e-78 246
MS.gene058701.t1 MTR_4g117770 43.979 382 182 11 1 365 1 367 3.26e-78 244
MS.gene058701.t1 MTR_4g117810 43.979 382 182 11 1 365 1 367 3.26e-78 244
MS.gene058701.t1 MTR_4g117850 44.865 370 172 17 7 360 22 375 2.89e-77 243
MS.gene058701.t1 MTR_4g023120 41.995 381 185 12 8 365 3 370 1.21e-76 241
MS.gene058701.t1 MTR_4g118380 42.077 366 174 8 1 337 1 357 2.05e-76 240
MS.gene058701.t1 MTR_4g021785 42.287 376 182 11 2 365 3 355 1.43e-75 238
MS.gene058701.t1 MTR_4g117780 43.455 382 184 14 1 365 1 367 2.01e-75 238
MS.gene058701.t1 MTR_1g055135 41.333 375 203 9 2 365 7 375 3.98e-74 234
MS.gene058701.t1 MTR_5g097210 40.217 368 197 11 3 360 4 358 2.54e-72 230
MS.gene058701.t1 MTR_4g117750 43.432 373 182 11 6 364 1 358 1.07e-71 231
MS.gene058701.t1 MTR_4g117750 40.152 132 64 4 241 358 346 476 1.40e-14 75.1
MS.gene058701.t1 MTR_4g117720 40.800 375 163 12 1 361 44 373 1.88e-71 228
MS.gene058701.t1 MTR_8g098830 64.118 170 56 2 174 339 32 200 2.87e-71 222
MS.gene058701.t1 MTR_8g433040 41.161 379 180 15 3 365 13 364 3.79e-70 224
MS.gene058701.t1 MTR_8g032380 41.161 379 180 15 3 365 13 364 3.79e-70 224
MS.gene058701.t1 MTR_4g023090 41.005 378 182 14 7 358 15 377 1.88e-69 223
MS.gene058701.t1 MTR_8g032390 40.541 370 176 12 3 361 35 371 2.23e-69 222
MS.gene058701.t1 MTR_4g023130 41.398 372 150 12 1 364 1 312 8.84e-69 219
MS.gene058701.t1 MTR_4g116330 40.751 373 162 10 3 365 18 341 2.73e-68 218
MS.gene058701.t1 MTR_4g122850 41.828 361 188 15 19 365 12 364 5.75e-68 219
MS.gene058701.t1 MTR_7g079420 48.913 276 87 8 108 365 905 1144 5.27e-66 226
MS.gene058701.t1 MTR_4g023190 42.246 374 182 14 3 363 5 357 2.81e-64 208
MS.gene058701.t1 MTR_4g023440 41.322 363 162 13 7 365 17 332 3.53e-63 205
MS.gene058701.t1 MTR_4g023380 38.974 390 174 13 3 358 11 370 9.99e-62 202
MS.gene058701.t1 MTR_4g023150 40.909 374 188 14 3 363 5 358 1.25e-59 196
MS.gene058701.t1 MTR_8g433030 38.043 368 155 12 3 361 35 338 2.50e-57 190
MS.gene058701.t1 MTR_8g013010 43.116 276 135 9 1 267 47 309 3.90e-57 189
MS.gene058701.t1 MTR_4g023200 41.176 374 187 13 3 363 5 358 6.87e-57 189
MS.gene058701.t1 MTR_1g055165 35.135 370 169 11 7 365 9 318 2.76e-53 179
MS.gene058701.t1 MTR_4g121580 37.166 374 181 14 1 355 1 339 9.19e-52 177
MS.gene058701.t1 MTR_4g117870 39.803 304 130 11 72 365 7 267 1.47e-50 170
MS.gene058701.t1 MTR_1g055195 37.755 294 158 7 83 365 199 478 7.26e-48 169
MS.gene058701.t1 MTR_4g118400 37.457 291 141 10 80 358 32 293 3.89e-43 152
MS.gene058701.t1 MTR_5g069120 48.901 182 76 4 18 186 1 178 4.11e-43 148
MS.gene058701.t1 MTR_4g118370 40.650 246 121 7 121 362 33 257 1.10e-42 149
MS.gene058701.t1 MTR_4g116320 40.845 213 116 7 152 358 43 251 3.32e-37 135
MS.gene058701.t1 MTR_1g055175 40.306 196 111 5 175 365 7 201 4.77e-36 130
MS.gene058701.t1 MTR_4g116340 38.710 248 113 8 1 235 26 247 3.16e-35 129
MS.gene058701.t1 MTR_4g117530 37.500 224 97 6 144 365 71 253 2.48e-34 127
MS.gene058701.t1 MTR_4g107820 29.781 366 225 11 8 357 36 385 7.00e-34 129
MS.gene058701.t1 MTR_4g107780 29.781 366 225 11 8 357 36 385 7.00e-34 129
MS.gene058701.t1 MTR_4g107820 29.781 366 225 11 8 357 36 385 8.14e-34 129
MS.gene058701.t1 MTR_4g107780 29.781 366 225 11 8 357 36 385 1.21e-33 129
MS.gene058701.t1 MTR_2g021150 30.746 335 187 17 7 315 13 328 1.22e-32 125
MS.gene058701.t1 MTR_8g040935 40.201 199 105 7 177 365 14 208 1.49e-32 121
MS.gene058701.t1 MTR_4g108820 31.488 289 153 8 7 293 41 286 9.55e-32 122
MS.gene058701.t1 MTR_5g022420 30.027 373 218 16 7 357 26 377 3.75e-31 122
MS.gene058701.t1 MTR_4g114700 34.733 262 113 7 105 356 5 218 1.13e-30 117
MS.gene058701.t1 MTR_3g013740 29.781 319 191 12 3 299 39 346 1.22e-30 121
MS.gene058701.t1 MTR_4g055060 30.492 305 184 12 8 296 30 322 5.82e-30 119
MS.gene058701.t1 MTR_6g463430 38.974 195 107 6 176 365 15 202 1.53e-29 113
MS.gene058701.t1 MTR_4g133170 30.240 334 183 17 8 315 4 313 3.71e-29 116
MS.gene058701.t1 MTR_3g009310 31.000 300 182 10 8 296 42 327 3.95e-29 116
MS.gene058701.t1 MTR_7g070830 26.575 365 210 11 8 324 21 375 1.31e-28 115
MS.gene058701.t1 MTR_3g014540 31.650 297 176 12 8 291 29 311 1.47e-28 114
MS.gene058701.t1 MTR_8g467140 31.757 296 180 11 6 291 30 313 1.62e-28 113
MS.gene058701.t1 MTR_3g036290 29.195 298 185 10 8 300 22 298 4.17e-28 113
MS.gene058701.t1 MTR_5g057690 27.667 300 196 9 8 303 46 328 5.45e-28 113
MS.gene058701.t1 MTR_1g094210 28.142 366 223 16 8 357 57 398 2.92e-27 111
MS.gene058701.t1 MTR_7g070880 25.714 420 224 12 8 358 21 421 9.28e-27 110
MS.gene058701.t1 MTR_3g007330 28.904 301 184 10 8 297 48 329 1.14e-26 109
MS.gene058701.t1 MTR_3g007360 28.649 370 221 15 11 358 55 403 1.54e-26 109
MS.gene058701.t1 MTR_1g094210 28.446 341 206 15 8 332 57 375 2.30e-26 109
MS.gene058701.t1 MTR_3g013770 28.904 301 183 10 8 291 33 319 3.34e-26 108
MS.gene058701.t1 MTR_3g009240 30.667 300 181 10 8 297 36 318 4.15e-26 108
MS.gene058701.t1 MTR_0267s0050 27.855 359 190 14 5 315 4 341 6.88e-26 107
MS.gene058701.t1 MTR_3g007410 29.276 304 182 12 11 298 55 341 1.00e-25 107
MS.gene058701.t1 MTR_8g101580 30.380 316 158 12 8 293 45 328 1.14e-25 107
MS.gene058701.t1 MTR_2g055970 29.032 372 226 14 5 357 208 560 2.85e-25 107
MS.gene058701.t1 MTR_1g055250 32.365 241 154 7 127 360 27 265 3.76e-25 104
MS.gene058701.t1 MTR_4g061340 29.487 312 186 10 8 301 26 321 7.30e-25 104
MS.gene058701.t1 MTR_3g013950 27.324 355 199 12 5 315 4 343 1.37e-24 103
MS.gene058701.t1 MTR_2g046900 28.662 314 186 13 1 293 21 317 2.78e-24 102
MS.gene058701.t1 MTR_6g065980 29.352 293 172 12 8 291 16 282 3.95e-24 102
MS.gene058701.t1 MTR_4g118360 45.378 119 60 2 245 358 1 119 4.03e-24 96.3
MS.gene058701.t1 MTR_0128s0020 29.538 325 179 14 6 298 16 322 4.67e-24 102
MS.gene058701.t1 MTR_5g057790 27.097 310 195 12 8 303 46 338 5.80e-24 102
MS.gene058701.t1 MTR_7g117720 38.140 215 95 10 1 203 1 189 6.33e-24 100
MS.gene058701.t1 MTR_7g117720 50.000 98 42 4 269 360 176 272 4.03e-16 78.2
MS.gene058701.t1 MTR_3g007430 27.523 327 201 10 11 320 46 353 7.64e-24 101
MS.gene058701.t1 MTR_1g097330 29.180 305 180 8 2 291 10 293 8.12e-24 102
MS.gene058701.t1 MTR_3g014570 29.545 308 188 10 8 300 29 322 1.44e-23 100
MS.gene058701.t1 MTR_4g030830 24.250 400 238 12 8 357 9 393 1.66e-23 100
MS.gene058701.t1 MTR_7g070440 29.305 331 188 13 5 307 4 316 1.96e-23 100
MS.gene058701.t1 MTR_7g055987 27.988 343 179 16 10 313 22 335 2.13e-23 100
MS.gene058701.t1 MTR_3g010970 26.975 367 222 14 11 357 51 391 3.00e-23 100
MS.gene058701.t1 MTR_2g025420 25.445 393 227 16 8 355 6 377 3.28e-23 100
MS.gene058701.t1 MTR_1g097560 29.968 317 153 16 5 293 33 308 3.35e-23 99.8
MS.gene058701.t1 MTR_1g054575 30.795 302 163 12 8 290 52 326 4.25e-23 101
MS.gene058701.t1 MTR_2g046920 27.389 314 182 14 1 293 17 305 5.78e-23 99.0
MS.gene058701.t1 MTR_0115s0020 26.914 405 231 19 8 362 10 399 6.62e-23 99.4
MS.gene058701.t1 MTR_1g097490 27.989 368 227 15 5 357 46 390 8.67e-23 99.0
MS.gene058701.t1 MTR_5g057710 26.797 306 195 12 8 300 46 335 9.38e-23 99.0
MS.gene058701.t1 MTR_3g010590 28.814 295 172 13 8 291 39 306 1.04e-22 98.6
MS.gene058701.t1 MTR_1g050542 26.260 377 221 12 8 357 58 404 1.24e-22 98.6
MS.gene058701.t1 MTR_3g030240 27.211 294 175 10 8 291 40 304 1.28e-22 98.2
MS.gene058701.t1 MTR_7g407070 26.791 321 193 12 8 298 32 340 1.32e-22 98.6
MS.gene058701.t1 MTR_6g053240 24.606 317 206 8 8 305 28 330 1.43e-22 98.2
MS.gene058701.t1 MTR_3g023930 28.772 285 178 10 8 291 34 294 1.45e-22 97.8
MS.gene058701.t1 MTR_4g117430 40.411 146 68 5 109 250 3 133 1.75e-22 92.8
MS.gene058701.t1 MTR_3g436150 27.273 319 188 14 8 298 32 334 1.94e-22 97.8
MS.gene058701.t1 MTR_3g036430 25.668 374 203 13 8 357 20 342 2.94e-22 96.7
MS.gene058701.t1 MTR_6g017280 24.812 399 243 14 4 359 5 389 3.37e-22 97.1
MS.gene058701.t1 MTR_2g046800 28.829 333 179 14 3 293 9 325 4.05e-22 97.1
MS.gene058701.t1 MTR_6g004660 28.479 309 194 11 8 297 16 316 4.08e-22 96.7
MS.gene058701.t1 MTR_5g023000 53.191 94 41 2 274 365 7 99 4.28e-22 90.1
MS.gene058701.t1 MTR_1g054725 25.393 382 229 15 7 357 19 375 4.52e-22 96.7
MS.gene058701.t1 MTR_5g069930 25.434 346 207 11 6 315 4 334 4.53e-22 96.7
MS.gene058701.t1 MTR_3g010920 26.997 363 227 12 8 357 44 381 4.86e-22 96.7
MS.gene058701.t1 MTR_5g057020 25.083 303 195 11 8 303 46 323 5.17e-22 95.9
MS.gene058701.t1 MTR_3g009260 28.378 296 184 12 11 297 44 320 6.32e-22 96.3
MS.gene058701.t1 MTR_3g083010 28.169 355 193 14 8 315 6 345 6.68e-22 96.7
MS.gene058701.t1 MTR_2g043410 28.440 327 183 11 8 298 22 333 7.77e-22 96.3
MS.gene058701.t1 MTR_3g006670 29.966 297 182 12 8 291 49 332 9.60e-22 95.9
MS.gene058701.t1 MTR_1g112930 27.541 305 189 13 8 297 25 312 1.09e-21 95.5
MS.gene058701.t1 MTR_7g028660 27.245 323 191 10 6 298 9 317 1.54e-21 95.1
MS.gene058701.t1 MTR_7g056503 29.524 315 194 12 7 298 20 329 1.54e-21 95.5
MS.gene058701.t1 MTR_2g029990 26.421 299 188 12 9 291 52 334 1.61e-21 95.5
MS.gene058701.t1 MTR_3g083640 27.759 299 178 10 8 291 55 330 1.66e-21 95.1
MS.gene058701.t1 MTR_3g010520 29.758 289 171 13 8 291 25 286 2.06e-21 94.4
MS.gene058701.t1 MTR_7g445890 26.150 413 214 13 1 359 9 384 2.14e-21 94.7
MS.gene058701.t1 MTR_4g019990 25.686 401 233 16 5 356 3 387 2.28e-21 94.7
MS.gene058701.t1 MTR_4g024890 26.708 322 202 15 6 304 8 318 2.59e-21 94.4
MS.gene058701.t1 MTR_2g028140 27.027 333 174 13 8 291 5 317 2.65e-21 94.7
MS.gene058701.t1 MTR_5g011200 26.121 379 228 18 8 356 17 373 3.11e-21 94.4
MS.gene058701.t1 MTR_6g053260 25.163 306 213 7 8 305 337 634 3.13e-21 95.5
MS.gene058701.t1 MTR_3g024110 28.333 300 184 12 8 297 101 379 3.22e-21 94.7
MS.gene058701.t1 MTR_7g057270 29.268 328 183 11 8 298 26 341 3.40e-21 94.7
MS.gene058701.t1 MTR_5g069760 27.586 348 186 14 6 313 4 325 3.58e-21 94.0
MS.gene058701.t1 MTR_3g010390 27.358 318 188 12 8 296 33 336 4.15e-21 94.0
MS.gene058701.t1 MTR_7g013590 29.831 295 172 10 15 291 43 320 4.37e-21 94.0
MS.gene058701.t1 MTR_1g056710 26.923 390 212 20 8 358 34 389 4.61e-21 94.0
MS.gene058701.t1 MTR_7g056390 27.492 331 186 12 8 298 18 334 5.02e-21 94.0
MS.gene058701.t1 MTR_8g073550 29.851 201 129 6 7 199 29 225 1.03e-20 90.1
MS.gene058701.t1 MTR_3g036335 28.155 309 182 14 8 297 41 328 1.10e-20 92.8
MS.gene058701.t1 MTR_6g021880 25.946 370 224 14 19 357 31 381 1.33e-20 92.4
MS.gene058701.t1 MTR_2g021190 26.129 310 177 12 8 291 21 304 1.33e-20 92.4
MS.gene058701.t1 MTR_0044s0300 28.428 299 178 12 8 291 38 315 1.65e-20 92.4
MS.gene058701.t1 MTR_3g006570 26.632 383 221 20 8 357 21 376 1.73e-20 92.0
MS.gene058701.t1 MTR_2g078900 26.710 307 172 12 8 291 33 309 1.82e-20 91.7
MS.gene058701.t1 MTR_2g021155 27.273 330 213 13 11 329 39 352 2.16e-20 93.2
MS.gene058701.t1 MTR_3g072470 29.290 338 170 15 8 298 19 334 2.21e-20 92.0
MS.gene058701.t1 MTR_7g056290 27.596 337 189 13 2 298 17 338 2.37e-20 92.0
MS.gene058701.t1 MTR_3g010430 26.724 348 200 17 8 330 36 353 2.87e-20 91.7
MS.gene058701.t1 MTR_7g062100 28.012 332 169 12 8 298 24 326 2.93e-20 91.7
MS.gene058701.t1 MTR_4g030980 26.685 356 182 11 8 298 15 356 2.99e-20 92.0
MS.gene058701.t1 MTR_7g055870 26.371 383 207 16 1 315 6 381 3.83e-20 91.7
MS.gene058701.t1 MTR_0128s0070 28.834 326 179 14 6 298 20 325 4.38e-20 91.3
MS.gene058701.t1 MTR_7g056003 26.687 326 185 12 10 298 17 325 5.13e-20 90.9
MS.gene058701.t1 MTR_7g062060 26.488 336 202 12 2 298 6 335 5.42e-20 90.9
MS.gene058701.t1 MTR_2g043400 28.571 343 162 15 8 298 23 334 5.55e-20 90.9
MS.gene058701.t1 MTR_4g013180 26.005 373 218 15 7 334 10 369 5.56e-20 91.3
MS.gene058701.t1 MTR_5g007610 26.562 320 183 14 8 297 41 338 5.69e-20 90.9
MS.gene058701.t1 MTR_3g007270 29.206 315 170 16 8 291 47 339 6.34e-20 90.9
MS.gene058701.t1 MTR_5g046300 25.000 300 197 9 8 297 4 285 6.47e-20 90.1
MS.gene058701.t1 MTR_5g046290 25.000 300 197 9 8 297 4 285 6.47e-20 90.1
MS.gene058701.t1 MTR_0064s0160 26.290 407 243 18 1 365 35 426 7.94e-20 90.9
MS.gene058701.t1 MTR_1g055070 29.851 268 150 13 8 249 49 304 8.12e-20 90.1
MS.gene058701.t1 MTR_7g052670 26.764 411 225 16 6 355 19 414 8.61e-20 90.5
MS.gene058701.t1 MTR_3g024150 26.441 295 183 10 11 291 38 312 9.28e-20 90.1
MS.gene058701.t1 MTR_4g109290 38.365 159 61 5 7 161 8 133 9.53e-20 86.3
MS.gene058701.t1 MTR_6g027910 27.184 309 183 12 11 291 12 306 1.14e-19 89.7
MS.gene058701.t1 MTR_3g010870 26.780 295 185 13 8 291 37 311 1.54e-19 89.4
MS.gene058701.t1 MTR_7g007300 27.273 308 190 11 8 304 103 387 1.65e-19 89.7
MS.gene058701.t1 MTR_6g007135 27.200 375 237 13 8 357 26 389 1.75e-19 89.4
MS.gene058701.t1 MTR_7g066000 25.146 342 220 11 5 315 22 358 1.75e-19 89.4
MS.gene058701.t1 MTR_3g030250 26.333 300 175 11 8 291 37 306 1.89e-19 89.0
MS.gene058701.t1 MTR_3g011100 27.362 307 192 13 8 297 235 527 2.02e-19 90.1
MS.gene058701.t1 MTR_7g066030 25.000 408 238 17 1 358 14 403 2.06e-19 89.4
MS.gene058701.t1 MTR_2g046830 25.879 313 188 14 1 293 18 306 2.06e-19 89.4
MS.gene058701.t1 MTR_1g115160 27.027 296 188 13 6 293 20 295 2.79e-19 88.6
MS.gene058701.t1 MTR_4g070550 25.994 327 179 13 8 291 5 311 2.84e-19 89.0
MS.gene058701.t1 MTR_2g028130 25.581 344 211 12 8 315 5 339 2.97e-19 89.0
MS.gene058701.t1 MTR_7g091630 26.923 338 185 14 4 298 28 346 3.04e-19 89.0
MS.gene058701.t1 MTR_4g031770 26.948 308 187 13 8 297 4 291 3.45e-19 88.2
MS.gene058701.t1 MTR_3g011060 26.852 324 166 13 8 291 28 320 3.57e-19 88.2
MS.gene058701.t1 MTR_3g006500 26.316 323 189 14 8 306 17 314 3.72e-19 88.2
MS.gene058701.t1 MTR_7g056760 26.567 335 181 12 6 296 21 334 3.82e-19 88.6
MS.gene058701.t1 MTR_1g068860 25.649 308 187 11 6 291 2 289 4.00e-19 88.2
MS.gene058701.t1 MTR_8g099460 24.227 388 219 13 5 355 2 351 4.70e-19 88.2
MS.gene058701.t1 MTR_1g055375 26.000 300 201 10 11 297 7 298 5.16e-19 87.8
MS.gene058701.t1 MTR_7g055930 25.849 383 209 15 1 315 6 381 6.19e-19 87.8
MS.gene058701.t1 MTR_2g047200 28.144 334 176 15 6 298 18 328 6.86e-19 87.4
MS.gene058701.t1 MTR_7g055977 29.167 336 169 13 6 301 5 311 9.61e-19 87.0
MS.gene058701.t1 MTR_2g426020 25.978 358 209 13 8 329 6 343 9.72e-19 87.0
MS.gene058701.t1 MTR_5g048160 25.564 399 241 17 8 361 4 391 1.14e-18 87.0
MS.gene058701.t1 MTR_7g077070 25.146 342 206 12 1 298 9 344 1.23e-18 87.0
MS.gene058701.t1 MTR_7g077970 27.607 326 188 13 8 293 7 324 1.38e-18 87.0
MS.gene058701.t1 MTR_2g024110 25.455 330 196 13 8 309 4 311 2.05e-18 85.9
MS.gene058701.t1 MTR_3g011120 26.287 369 226 15 5 343 11 363 2.09e-18 85.9
MS.gene058701.t1 MTR_2g047832 26.444 329 186 14 1 293 22 330 2.15e-18 86.3
MS.gene058701.t1 MTR_0464s0020 25.740 338 194 14 6 298 21 346 2.56e-18 86.3
MS.gene058701.t1 MTR_5g046260 24.399 291 180 9 8 297 4 255 2.62e-18 84.7
MS.gene058701.t1 MTR_3g011020 27.609 297 179 14 8 291 28 301 4.24e-18 85.1
MS.gene058701.t1 MTR_4g129190 26.524 328 194 10 4 298 2 315 4.29e-18 85.1
MS.gene058701.t1 MTR_7g056820 23.684 380 207 12 8 335 7 355 6.23e-18 84.7
MS.gene058701.t1 MTR_3g464470 25.069 363 200 15 5 320 4 341 7.58e-18 84.3
MS.gene058701.t1 MTR_1g068835 24.556 338 208 10 8 324 4 315 8.49e-18 84.3
MS.gene058701.t1 MTR_2g066200 26.389 360 212 15 3 324 7 351 9.24e-18 84.3
MS.gene058701.t1 MTR_7g066100 26.126 333 195 11 4 297 7 327 9.80e-18 84.3
MS.gene058701.t1 MTR_1g088120 25.455 330 200 10 6 298 8 328 9.89e-18 84.3
MS.gene058701.t1 MTR_7g066010 25.071 351 191 12 1 315 14 328 1.09e-17 84.0
MS.gene058701.t1 MTR_4g122860 34.450 209 98 9 168 365 140 320 1.49e-17 83.2
MS.gene058701.t1 MTR_4g031020 26.074 349 193 11 8 298 15 356 1.80e-17 83.6
MS.gene058701.t1 MTR_6g013270 26.837 313 177 11 8 293 29 316 1.86e-17 83.6
MS.gene058701.t1 MTR_2g437110 26.768 396 223 18 6 357 20 392 2.17e-17 83.6
MS.gene058701.t1 MTR_4g037465 24.706 340 213 8 8 315 21 349 2.52e-17 83.2
MS.gene058701.t1 MTR_2g066170 25.000 396 233 19 3 356 7 380 2.79e-17 82.8
MS.gene058701.t1 MTR_8g039500 25.770 357 207 15 3 324 7 340 4.24e-17 82.0
MS.gene058701.t1 MTR_0760s0010 29.758 289 173 12 13 292 52 319 4.48e-17 82.4
MS.gene058701.t1 MTR_5g068040 26.220 328 168 12 8 298 16 306 4.52e-17 82.0
MS.gene058701.t1 MTR_1g068875 24.324 333 205 10 8 315 4 314 5.19e-17 82.0
MS.gene058701.t1 MTR_0097s0030 26.994 326 194 12 5 304 11 318 5.82e-17 82.0
MS.gene058701.t1 MTR_2g047240 26.994 326 194 12 5 304 11 318 5.82e-17 82.0
MS.gene058701.t1 MTR_2g021800 25.412 425 227 16 2 358 10 412 6.14e-17 82.0
MS.gene058701.t1 MTR_6g048140 27.864 323 181 16 8 305 39 334 6.64e-17 81.6
MS.gene058701.t1 MTR_2g078850 27.152 302 174 13 11 291 33 309 7.11e-17 81.3
MS.gene058701.t1 MTR_8g062660 25.545 321 167 13 8 289 22 309 7.97e-17 82.4
MS.gene058701.t1 MTR_1g029650 25.305 328 202 11 1 298 1 315 8.94e-17 81.3
MS.gene058701.t1 MTR_3g464500 24.090 357 214 12 5 320 24 364 9.23e-17 81.3
MS.gene058701.t1 MTR_5g043160 27.451 357 197 17 10 311 52 401 1.15e-16 81.3
MS.gene058701.t1 MTR_4g023430 62.712 59 21 1 3 60 36 94 1.53e-16 78.2
MS.gene058701.t1 MTR_2g028160 25.069 363 215 15 8 327 5 353 1.62e-16 80.9
MS.gene058701.t1 MTR_7g061060 24.225 355 209 13 2 315 7 342 1.87e-16 80.5
MS.gene058701.t1 MTR_7g056710 27.193 342 199 12 7 315 17 341 1.91e-16 80.1
MS.gene058701.t1 MTR_7g078860 23.494 332 207 9 2 298 3 322 1.97e-16 80.5
MS.gene058701.t1 MTR_3g011650 30.734 218 128 10 11 222 82 282 2.26e-16 79.0
MS.gene058701.t1 MTR_2g006360 28.247 308 154 14 2 298 41 292 2.81e-16 79.7
MS.gene058701.t1 MTR_3g030330 24.129 373 234 15 8 364 20 359 2.94e-16 79.7
MS.gene058701.t1 MTR_7g061050 24.398 332 192 12 2 298 7 314 3.45e-16 79.7
MS.gene058701.t1 MTR_6g017270 24.490 343 174 11 6 315 7 297 3.61e-16 79.0
MS.gene058701.t1 MTR_2g104340 25.320 391 242 14 7 358 13 392 3.63e-16 79.7
MS.gene058701.t1 MTR_5g027370 22.478 347 223 11 12 328 33 363 3.67e-16 79.7
MS.gene058701.t1 MTR_4g030110 25.197 381 193 16 2 332 24 362 4.08e-16 79.3
MS.gene058701.t1 MTR_3g058480 26.280 293 182 9 8 283 39 314 4.39e-16 78.6
MS.gene058701.t1 MTR_2g028110 26.129 310 183 11 8 291 4 293 4.73e-16 79.0
MS.gene058701.t1 MTR_5g027330 22.767 347 222 11 12 328 44 374 5.11e-16 79.3
MS.gene058701.t1 MTR_2g047892 25.077 323 198 13 6 298 20 328 5.48e-16 79.0
MS.gene058701.t1 MTR_0649s0020 25.954 393 232 16 8 357 11 387 6.58e-16 78.6
MS.gene058701.t1 MTR_0627s0010 24.260 338 185 13 8 292 38 357 6.65e-16 79.0
MS.gene058701.t1 MTR_5g096710 26.625 323 193 10 5 298 20 327 7.32e-16 78.6
MS.gene058701.t1 MTR_5g097350 27.273 385 211 20 17 358 25 383 8.01e-16 78.6
MS.gene058701.t1 MTR_3g023940 24.756 307 184 9 8 291 34 316 1.25e-15 77.8
MS.gene058701.t1 MTR_0242s0060 25.806 341 185 11 6 298 7 327 1.61e-15 77.8
MS.gene058701.t1 MTR_0242s0040 25.806 341 185 11 6 298 7 327 1.61e-15 77.8
MS.gene058701.t1 MTR_7g091640 26.647 334 185 14 5 298 32 345 1.64e-15 77.4
MS.gene058701.t1 MTR_4g030090 25.806 310 196 11 8 291 14 315 1.65e-15 77.8
MS.gene058701.t1 MTR_2g021252 25.321 312 185 12 11 305 50 330 1.79e-15 77.4
MS.gene058701.t1 MTR_3g030350 25.497 302 195 11 8 297 35 318 1.99e-15 77.4
MS.gene058701.t1 MTR_4g033495 25.846 325 191 12 8 298 27 335 2.15e-15 77.4
MS.gene058701.t1 MTR_3g010620 25.086 291 180 11 11 291 39 301 2.16e-15 77.4
MS.gene058701.t1 MTR_6g004210 26.506 332 188 13 19 309 36 352 2.22e-15 77.4
MS.gene058701.t1 MTR_2g021770 25.000 388 236 13 19 358 23 403 2.39e-15 77.0
MS.gene058701.t1 MTR_7g022600 25.749 334 204 8 5 298 20 349 2.84e-15 77.0
MS.gene058701.t1 MTR_3g030310 25.243 309 183 12 8 291 21 306 2.99e-15 76.6
MS.gene058701.t1 MTR_4g129160 27.761 335 189 14 8 298 7 332 3.66e-15 76.3
MS.gene058701.t1 MTR_3g009250 30.594 219 126 11 11 222 44 243 3.71e-15 74.7
MS.gene058701.t1 MTR_5g069390 24.538 379 234 15 1 334 19 390 3.73e-15 77.0
MS.gene058701.t1 MTR_2g024100 26.455 378 217 16 14 355 14 366 4.85e-15 76.3
MS.gene058701.t1 MTR_2g031720 27.632 304 186 11 8 291 6 295 4.96e-15 76.3
MS.gene058701.t1 MTR_1g015730 25.153 326 191 11 7 301 8 311 5.44e-15 75.9
MS.gene058701.t1 MTR_2g461450 24.709 344 196 14 6 315 16 330 5.64e-15 75.9
MS.gene058701.t1 MTR_6g048120 25.610 328 198 14 8 311 36 341 6.29e-15 75.9
MS.gene058701.t1 MTR_5g009060 25.938 320 195 12 8 291 25 338 9.58e-15 75.5
MS.gene058701.t1 MTR_7g052150 26.543 324 186 10 6 298 20 322 1.08e-14 75.1
MS.gene058701.t1 MTR_7g078040 25.148 338 204 12 6 298 7 340 1.16e-14 75.1
MS.gene058701.t1 MTR_6g034720 44.762 105 39 3 145 241 71 164 1.23e-14 72.8
MS.gene058701.t1 MTR_6g016285 26.205 332 191 14 6 297 19 336 1.49e-14 75.1
MS.gene058701.t1 MTR_7g060940 26.269 335 187 14 1 298 15 326 1.49e-14 74.7
MS.gene058701.t1 MTR_7g035295 24.619 394 197 14 1 341 9 355 2.29e-14 74.3
MS.gene058701.t1 MTR_7g061090 24.324 333 198 11 6 298 20 338 2.29e-14 74.3
MS.gene058701.t1 MTR_2g021210 23.948 309 202 11 8 305 84 370 2.86e-14 73.9
MS.gene058701.t1 MTR_0128s0010 25.472 318 204 8 5 298 18 326 2.92e-14 73.9
MS.gene058701.t1 MTR_4g011660 25.148 338 201 13 5 298 16 345 3.18e-14 73.9
MS.gene058701.t1 MTR_7g077990 24.224 322 198 9 6 298 15 319 3.26e-14 73.6
MS.gene058701.t1 MTR_5g059430 23.301 412 250 15 1 356 19 420 4.27e-14 73.6
MS.gene058701.t1 MTR_3g058470 24.771 327 191 8 8 315 37 327 4.62e-14 73.2
MS.gene058701.t1 MTR_4g030760 22.985 335 220 11 3 315 68 386 4.62e-14 73.6
MS.gene058701.t1 MTR_2g047878 25.613 367 205 15 5 340 18 347 5.05e-14 72.8
MS.gene058701.t1 MTR_1g037540 25.077 323 197 10 15 295 12 331 5.10e-14 73.2
MS.gene058701.t1 MTR_3g024040 24.932 365 222 15 15 357 38 372 5.85e-14 72.8
MS.gene058701.t1 MTR_4g102410 24.816 407 233 18 7 359 60 447 5.86e-14 73.2
MS.gene058701.t1 MTR_7g056200 25.076 327 172 11 6 297 21 309 6.49e-14 72.8
MS.gene058701.t1 MTR_3g007300 26.645 304 165 14 8 299 49 306 6.66e-14 72.8
MS.gene058701.t1 MTR_5g022090 24.528 318 177 12 8 300 34 313 6.93e-14 72.8
MS.gene058701.t1 MTR_7g078840 26.136 352 198 14 1 298 3 346 6.99e-14 72.8
MS.gene058701.t1 MTR_5g008530 56.140 57 25 0 5 61 15 71 7.99e-14 66.2
MS.gene058701.t1 MTR_3g058440 24.542 273 182 8 8 267 35 296 8.63e-14 71.6
MS.gene058701.t1 MTR_7g056260 24.242 330 184 12 8 297 14 317 8.74e-14 71.6
MS.gene058701.t1 MTR_7g069550 27.493 371 205 17 3 324 9 364 9.66e-14 72.4
MS.gene058701.t1 MTR_4g014370 22.275 422 242 16 3 359 6 406 1.86e-13 71.6
MS.gene058701.t1 MTR_4g028510 26.027 365 223 15 8 332 16 373 2.10e-13 71.6
MS.gene058701.t1 MTR_1g442850 23.926 326 193 11 7 298 4 308 2.20e-13 71.2
MS.gene058701.t1 MTR_6g017305 26.957 230 124 9 122 315 17 238 2.45e-13 70.1
MS.gene058701.t1 MTR_3g010870 28.378 222 130 11 8 220 37 238 2.85e-13 70.1
MS.gene058701.t1 MTR_2g426060 24.390 328 179 12 8 291 6 308 3.15e-13 70.9
MS.gene058701.t1 MTR_8g464770 25.836 329 180 13 3 291 7 311 3.17e-13 70.5
MS.gene058701.t1 MTR_7g056737 25.301 332 175 12 6 297 20 318 4.35e-13 70.5
MS.gene058701.t1 MTR_1g114700 25.890 309 184 11 8 293 29 315 4.42e-13 70.1
MS.gene058701.t1 MTR_6g461660 24.496 347 200 14 3 303 14 344 4.49e-13 70.1
MS.gene058701.t1 MTR_5g057643 26.484 219 139 8 8 217 46 251 4.83e-13 68.9
MS.gene058701.t1 MTR_6g090180 24.265 408 244 16 3 359 42 435 4.93e-13 70.5
MS.gene058701.t1 MTR_7g055850 33.495 206 101 9 8 180 13 215 4.99e-13 69.3
MS.gene058701.t1 MTR_3g009300 25.581 301 171 11 11 301 37 294 6.98e-13 69.3
MS.gene058701.t1 MTR_7g056570 24.242 396 231 16 7 360 17 385 6.98e-13 69.7
MS.gene058701.t1 MTR_4g013185 24.633 341 201 12 6 298 8 340 7.04e-13 69.7
MS.gene058701.t1 MTR_7g078900 24.425 348 201 16 1 298 1 336 7.57e-13 69.7
MS.gene058701.t1 MTR_1g055200 44.086 93 50 2 105 196 5 96 7.72e-13 64.7
MS.gene058701.t1 MTR_3g024130 25.514 243 156 11 68 297 22 252 8.53e-13 68.9
MS.gene058701.t1 MTR_6g086920 24.528 371 182 12 6 297 36 387 8.68e-13 69.7
MS.gene058701.t1 MTR_7g009265 24.510 306 170 13 104 359 31 325 1.20e-12 68.6
MS.gene058701.t1 MTR_1g115185 25.249 301 197 11 7 293 38 324 1.21e-12 68.9
MS.gene058701.t1 MTR_0707s0020 24.528 371 182 12 6 297 24 375 1.33e-12 68.9
MS.gene058701.t1 MTR_7g056797 25.077 323 205 10 5 298 20 334 1.35e-12 68.9
MS.gene058701.t1 MTR_2g025960 24.280 243 143 10 106 315 5 239 1.85e-12 67.8
MS.gene058701.t1 MTR_6g014720 26.014 296 186 13 8 293 26 298 4.14e-12 67.4
MS.gene058701.t1 MTR_1g071010 24.540 326 192 12 8 298 15 321 4.61e-12 67.0
MS.gene058701.t1 MTR_8g066440 24.129 373 223 13 9 330 24 387 4.81e-12 67.0
MS.gene058701.t1 MTR_7g079160 23.691 363 206 12 1 301 1 354 5.65e-12 67.0
MS.gene058701.t1 MTR_7g017130 25.385 390 238 16 8 358 18 393 5.67e-12 67.0
MS.gene058701.t1 MTR_4g028660 23.485 396 234 18 5 348 13 391 5.92e-12 67.0
MS.gene058701.t1 MTR_4g027450 23.485 396 234 18 5 348 13 391 5.92e-12 67.0
MS.gene058701.t1 MTR_7g016930 25.225 333 186 14 3 301 11 314 6.50e-12 66.2
MS.gene058701.t1 MTR_1g055055 25.914 301 177 14 6 293 24 291 6.96e-12 66.2
MS.gene058701.t1 MTR_5g010660 26.174 298 186 11 8 291 34 311 8.30e-12 66.6
MS.gene058701.t1 MTR_2g065840 23.325 403 248 16 3 363 7 390 8.93e-12 66.2
MS.gene058701.t1 MTR_2g065860 24.545 330 197 12 3 294 7 322 1.23e-11 65.9
MS.gene058701.t1 MTR_0054s0090 23.628 419 233 19 2 359 11 403 1.42e-11 65.9
MS.gene058701.t1 MTR_7g050480 24.540 326 183 15 1 291 15 312 1.74e-11 65.5
MS.gene058701.t1 MTR_2g033410 24.742 291 186 11 8 283 9 281 2.14e-11 65.1
MS.gene058701.t1 MTR_1g097370 31.765 170 97 8 148 305 135 297 2.17e-11 65.5
MS.gene058701.t1 MTR_0831s0010 25.592 422 195 19 5 358 47 417 2.20e-11 65.1
MS.gene058701.t1 MTR_6g055210 25.152 330 180 14 7 290 21 329 2.28e-11 65.1
MS.gene058701.t1 MTR_2g064950 23.936 376 211 13 1 324 1 353 2.28e-11 65.1
MS.gene058701.t1 MTR_5g097330 24.060 399 254 12 3 360 11 401 2.82e-11 64.7
MS.gene058701.t1 MTR_3g010440 25.510 294 155 11 8 299 26 257 2.95e-11 64.3
MS.gene058701.t1 MTR_2g034700 24.762 315 191 15 7 294 13 308 3.40e-11 64.3
MS.gene058701.t1 MTR_7g050520 24.233 326 184 15 1 291 15 312 4.18e-11 64.3
MS.gene058701.t1 MTR_7g017170 25.905 359 214 15 8 327 18 363 4.31e-11 64.3
MS.gene058701.t1 MTR_4g080200 26.271 354 189 20 8 333 3 312 4.38e-11 63.9
MS.gene058701.t1 MTR_5g056020 25.970 335 200 13 8 298 17 347 4.74e-11 64.3
MS.gene058701.t1 MTR_7g445750 24.832 298 144 13 5 249 20 290 7.06e-11 63.2
MS.gene058701.t1 MTR_5g057040 27.179 195 121 8 8 191 46 230 7.49e-11 64.3
MS.gene058701.t1 MTR_8g063370 22.835 381 236 16 10 354 26 384 9.37e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058701.t1 AT3G06240 27.224 371 209 14 4 327 32 388 2.25e-25 106
MS.gene058701.t1 AT4G12560 25.079 315 188 12 8 292 4 300 8.08e-20 90.5
MS.gene058701.t1 AT4G12560 25.079 315 188 12 8 292 4 300 8.08e-20 90.5
MS.gene058701.t1 AT4G12560 25.079 315 188 12 8 292 4 300 8.08e-20 90.5
MS.gene058701.t1 AT1G33530 27.778 306 171 14 5 292 94 367 1.17e-19 90.1
MS.gene058701.t1 AT3G23880 25.786 318 172 10 8 293 14 299 7.71e-19 87.0
MS.gene058701.t1 AT5G49610 27.301 326 197 11 3 311 4 306 3.05e-18 85.5
MS.gene058701.t1 AT3G22720 22.531 324 224 12 8 315 5 317 1.62e-15 77.4
MS.gene058701.t1 AT4G22390 24.214 318 179 13 9 291 5 295 1.65e-15 77.8
MS.gene058701.t1 AT4G22390 24.214 318 179 13 9 291 5 295 1.72e-15 77.8
MS.gene058701.t1 AT3G16210 26.384 307 173 14 5 296 2 270 2.74e-14 73.6
MS.gene058701.t1 AT3G07870 26.433 314 184 15 8 291 28 324 7.01e-14 72.8
MS.gene058701.t1 AT3G10240 26.048 334 206 16 8 327 27 333 1.00e-13 72.4
MS.gene058701.t1 AT1G50870 27.152 302 160 15 9 278 32 305 7.28e-13 69.7
MS.gene058701.t1 AT3G49980 25.856 263 172 12 8 261 5 253 9.05e-13 69.3
MS.gene058701.t1 AT3G49980 25.856 263 172 12 8 261 6 254 9.69e-13 69.3
MS.gene058701.t1 AT1G47790 22.337 291 207 6 1 286 18 294 1.11e-12 68.9
MS.gene058701.t1 AT1G47730 22.691 379 238 16 8 363 25 371 5.30e-12 67.0
MS.gene058701.t1 AT4G21240 24.765 319 189 14 8 302 36 327 7.36e-12 66.6
MS.gene058701.t1 AT3G16590 29.831 295 164 18 8 281 5 277 7.46e-12 66.6
MS.gene058701.t1 AT1G11620 25.649 308 187 14 8 294 6 292 1.32e-11 65.9
MS.gene058701.t1 AT3G52320 24.355 349 229 16 8 344 27 352 1.48e-11 65.5
MS.gene058701.t1 AT3G22700 23.913 322 217 13 8 315 5 312 2.31e-11 64.7
MS.gene058701.t1 AT5G07610 26.829 328 191 17 10 309 35 341 2.72e-11 65.1

Find 71 sgRNAs with CRISPR-Local

Find 86 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTGAAATAATTGTTAT+TGG 0.180451 7.4:+26450356 None:intergenic
TATTATTGCCTTTGATTTAA+AGG 0.191385 7.4:-26450076 MS.gene058701:CDS
AAATCTATGGATAGGGTTTC+AGG 0.201692 7.4:+26450558 None:intergenic
TGATGATTACATAGTAGTTT+TGG 0.255044 7.4:-26450304 MS.gene058701:CDS
AATTATGATTTGTTAATATC+TGG 0.278985 7.4:-26450006 MS.gene058701:CDS
ATGTAGAGGGTTCCTATTAT+TGG 0.280996 7.4:-26450448 MS.gene058701:CDS
TTCAAGTTGCTCTTTGGTTT+CGG 0.301503 7.4:-26450342 MS.gene058701:CDS
GAGCGATATATTAAAATCTA+TGG 0.304256 7.4:+26450545 None:intergenic
TCTTGAATGGTTCTATTCAT+TGG 0.308230 7.4:-26450131 MS.gene058701:CDS
GAAATAATTGTTATTGGAAT+TGG 0.308506 7.4:+26450362 None:intergenic
AATTATTTCAAGTTGCTCTT+TGG 0.312261 7.4:-26450348 MS.gene058701:CDS
TCTTCCCGAAGAAGTGATTA+AGG 0.343243 7.4:-26450748 MS.gene058701:CDS
GATTTCCTTAATCACTTCTT+CGG 0.344429 7.4:+26450743 None:intergenic
ATTACTGTAACTGTATTTGT+AGG 0.359987 7.4:+26450278 None:intergenic
GTAACATATGCCTCTACCTT+TGG 0.368132 7.4:-26450422 MS.gene058701:CDS
CTTCCAAATGATTGTTCTCC+TGG 0.373367 7.4:-26450030 MS.gene058701:CDS
GGATCTTATCCTACAATTAG+AGG 0.375283 7.4:-26450474 MS.gene058701:CDS
GGAAATCCTGCTCAGGTTGC+CGG 0.377114 7.4:-26450727 MS.gene058701:CDS
GAATGGTTCTATTCATTGGC+TGG 0.382596 7.4:-26450127 MS.gene058701:CDS
TTCTGTATACACCGCCGTTT+GGG 0.383534 7.4:+26449732 None:intergenic
ATTTCCTTAATCACTTCTTC+GGG 0.388312 7.4:+26450744 None:intergenic
ACAAATTGTGGTGATATAGT+TGG 0.389150 7.4:-26449844 MS.gene058701:CDS
TTTCCAGGAGAACAATCATT+TGG 0.391753 7.4:+26450027 None:intergenic
CTACATGAACCTCTAATTGT+AGG 0.392008 7.4:+26450465 None:intergenic
ATATGTTACAGTCCAATAAT+AGG 0.393919 7.4:+26450436 None:intergenic
AGATGTCTACAATTAAGATA+TGG 0.409901 7.4:-26449957 MS.gene058701:CDS
ATTCTGTATACACCGCCGTT+TGG 0.420055 7.4:+26449731 None:intergenic
TTTCATTGAAAGCTAATAAG+TGG 0.422305 7.4:-26450230 MS.gene058701:CDS
ATTAACAAATCATAATTTCC+AGG 0.447534 7.4:+26450012 None:intergenic
TTAAGCTTGCTCAGTGCCAT+TGG 0.457191 7.4:+26449693 None:intergenic
AAAGTTGGGTCGTTCTTGAA+TGG 0.457479 7.4:-26450144 MS.gene058701:CDS
TAATACTAATTCAATTAACT+TGG 0.461142 7.4:-26450259 MS.gene058701:CDS
TGTTGCTTCCTTTAAATCAA+AGG 0.470328 7.4:+26450068 None:intergenic
CTGGCGGAATTATCAGTGTA+TGG 0.477771 7.4:-26449987 MS.gene058701:CDS
AATATGCAGTGCATTCATCT+TGG 0.489224 7.4:-26449924 MS.gene058701:CDS
GCAAATGCGTCTGTAAGTTA+TGG 0.492449 7.4:-26450686 MS.gene058701:CDS
CCAATGTGCTTTACAAATTG+TGG 0.493611 7.4:-26449856 MS.gene058701:CDS
TAATAAGTGGAAACAAGTTA+AGG 0.498830 7.4:-26450217 MS.gene058701:CDS
ACTTCACCGGCAACCTGAGC+AGG 0.499391 7.4:+26450721 None:intergenic
TATATTAAAATCTATGGATA+GGG 0.504086 7.4:+26450551 None:intergenic
ATATATTAAAATCTATGGAT+AGG 0.508742 7.4:+26450550 None:intergenic
GATGTCTACAATTAAGATAT+GGG 0.511105 7.4:-26449956 MS.gene058701:CDS
TAGTTGGACCAACTGATGAT+GGG 0.513499 7.4:-26449828 MS.gene058701:CDS
CAGCGTAGCACAGACTTCAC+CGG 0.521754 7.4:+26450708 None:intergenic
CACAAGTCTATGTGTGGGTG+AGG 0.525203 7.4:+26450611 None:intergenic
CTACAAGAGTATCATTCCTA+TGG 0.529665 7.4:-26449775 MS.gene058701:CDS
TACCTTTGGAATCCATCCAC+TGG 0.538863 7.4:-26450408 MS.gene058701:CDS
CAATTAGAGGTTCATGTAGA+GGG 0.544432 7.4:-26450461 MS.gene058701:CDS
CTATGTAATCATCACTTGGC+AGG 0.547297 7.4:+26450313 None:intergenic
TGATTAAGGAAATCCTGCTC+AGG 0.556718 7.4:-26450734 MS.gene058701:CDS
ATAGTTGGACCAACTGATGA+TGG 0.559249 7.4:-26449829 MS.gene058701:CDS
TTACTTTATGAGTTCCCAAA+CGG 0.562024 7.4:-26449746 MS.gene058701:CDS
ACAATTAGAGGTTCATGTAG+AGG 0.574936 7.4:-26450462 MS.gene058701:CDS
CCACAATTTGTAAAGCACAT+TGG 0.576723 7.4:+26449856 None:intergenic
TGGATGGATTCCAAAGGTAG+AGG 0.582971 7.4:+26450412 None:intergenic
TATGATTTGTTAATATCTGG+CGG 0.598102 7.4:-26450003 MS.gene058701:CDS
CATAAAGTAACGGTCACCAT+AGG 0.601789 7.4:+26449759 None:intergenic
AGTTGGACCAACTGATGATG+GGG 0.609339 7.4:-26449827 MS.gene058701:CDS
TCTCTGCTTTCACTCTCCAA+TGG 0.611595 7.4:-26449709 MS.gene058701:CDS
TATTTGTTTGTTGACACCAG+TGG 0.613843 7.4:+26450392 None:intergenic
AATTATCAGTGTATGGAATG+TGG 0.621348 7.4:-26449980 MS.gene058701:CDS
ACTACTATGTAATCATCACT+TGG 0.623891 7.4:+26450309 None:intergenic
TGTTTGTTGACACCAGTGGA+TGG 0.624812 7.4:+26450396 None:intergenic
CTTTATGAGTTCCCAAACGG+CGG 0.649017 7.4:-26449743 MS.gene058701:CDS
GAAGATCACAAGTCTATGTG+TGG 0.651611 7.4:+26450605 None:intergenic
TTTGGGAACTCATAAAGTAA+CGG 0.658638 7.4:+26449749 None:intergenic
TTAGTGAAGATTAATGACAA+AGG 0.669184 7.4:-26449802 MS.gene058701:CDS
CACCAGTGGATGGATTCCAA+AGG 0.677344 7.4:+26450406 None:intergenic
GTTGGACCAACTGATGATGG+GGG 0.704782 7.4:-26449826 MS.gene058701:CDS
AAGATCACAAGTCTATGTGT+GGG 0.713503 7.4:+26450606 None:intergenic
ATTGTAGGATAAGATCCGTG+AGG 0.760013 7.4:+26450480 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTAAAATCTATGGAT+AGG + chr7.4:26449914-26449933 None:intergenic 15.0%
!! TAATACTAATTCAATTAACT+TGG - chr7.4:26450202-26450221 MS.gene058701:CDS 15.0%
!! TATATTAAAATCTATGGATA+GGG + chr7.4:26449913-26449932 None:intergenic 15.0%
!!! AATTATGATTTGTTAATATC+TGG - chr7.4:26450455-26450474 MS.gene058701:CDS 15.0%
!! ATTAACAAATCATAATTTCC+AGG + chr7.4:26450452-26450471 None:intergenic 20.0%
!! CAACTTGAAATAATTGTTAT+TGG + chr7.4:26450108-26450127 None:intergenic 20.0%
!!! GAAATAATTGTTATTGGAAT+TGG + chr7.4:26450102-26450121 None:intergenic 20.0%
!!! TATTATTGCCTTTGATTTAA+AGG - chr7.4:26450385-26450404 MS.gene058701:CDS 20.0%
! AAATGTGAAGTTGAAAAATG+AGG + chr7.4:26449819-26449838 None:intergenic 25.0%
! AGATGTCTACAATTAAGATA+TGG - chr7.4:26450504-26450523 MS.gene058701:CDS 25.0%
! ATATGTTACAGTCCAATAAT+AGG + chr7.4:26450028-26450047 None:intergenic 25.0%
! ATTACTGTAACTGTATTTGT+AGG + chr7.4:26450186-26450205 None:intergenic 25.0%
! GAGCGATATATTAAAATCTA+TGG + chr7.4:26449919-26449938 None:intergenic 25.0%
! GATGTCTACAATTAAGATAT+GGG - chr7.4:26450505-26450524 MS.gene058701:CDS 25.0%
! TAATAAGTGGAAACAAGTTA+AGG - chr7.4:26450244-26450263 MS.gene058701:CDS 25.0%
! TTAGTGAAGATTAATGACAA+AGG - chr7.4:26450659-26450678 MS.gene058701:CDS 25.0%
! TTTCATTGAAAGCTAATAAG+TGG - chr7.4:26450231-26450250 MS.gene058701:CDS 25.0%
!! GATGATTACATAGTAGTTTT+GGG - chr7.4:26450158-26450177 MS.gene058701:CDS 25.0%
!! TGATGATTACATAGTAGTTT+TGG - chr7.4:26450157-26450176 MS.gene058701:CDS 25.0%
!! TGGTTTATAATTTTGTGACT+GGG - chr7.4:26450354-26450373 MS.gene058701:CDS 25.0%
!!! AATTATTTCAAGTTGCTCTT+TGG - chr7.4:26450113-26450132 MS.gene058701:CDS 25.0%
!!! ATGATTACATAGTAGTTTTG+GGG - chr7.4:26450159-26450178 MS.gene058701:CDS 25.0%
!!! CTGAATTTTGTTTCAAAGTT+GGG - chr7.4:26450303-26450322 MS.gene058701:CDS 25.0%
!!! TATGATTTGTTAATATCTGG+CGG - chr7.4:26450458-26450477 MS.gene058701:CDS 25.0%
!!! TCTGAATTTTGTTTCAAAGT+TGG - chr7.4:26450302-26450321 MS.gene058701:CDS 25.0%
!!! TTGTTTCTGATTTTCCTTAT+AGG - chr7.4:26450267-26450286 MS.gene058701:CDS 25.0%
AATTATCAGTGTATGGAATG+TGG - chr7.4:26450481-26450500 MS.gene058701:CDS 30.0%
ACAAATTGTGGTGATATAGT+TGG - chr7.4:26450617-26450636 MS.gene058701:CDS 30.0%
ACTACTATGTAATCATCACT+TGG + chr7.4:26450155-26450174 None:intergenic 30.0%
ATTTCCTTAATCACTTCTTC+GGG + chr7.4:26449720-26449739 None:intergenic 30.0%
GATTTCCTTAATCACTTCTT+CGG + chr7.4:26449721-26449740 None:intergenic 30.0%
TTACTTTATGAGTTCCCAAA+CGG - chr7.4:26450715-26450734 MS.gene058701:CDS 30.0%
TTTGGGAACTCATAAAGTAA+CGG + chr7.4:26450715-26450734 None:intergenic 30.0%
! CTGGTTTATAATTTTGTGAC+TGG - chr7.4:26450353-26450372 MS.gene058701:CDS 30.0%
! TCTTGAATGGTTCTATTCAT+TGG - chr7.4:26450330-26450349 MS.gene058701:CDS 30.0%
! TGTTGCTTCCTTTAAATCAA+AGG + chr7.4:26450396-26450415 None:intergenic 30.0%
! TTATAATTTTGTGACTGGGA+AGG - chr7.4:26450358-26450377 MS.gene058701:CDS 30.0%
AAATCTATGGATAGGGTTTC+AGG + chr7.4:26449906-26449925 None:intergenic 35.0%
AAGATCACAAGTCTATGTGT+GGG + chr7.4:26449858-26449877 None:intergenic 35.0%
AATATGCAGTGCATTCATCT+TGG - chr7.4:26450537-26450556 MS.gene058701:CDS 35.0%
ACAATTAGAGGTTCATGTAG+AGG - chr7.4:26449999-26450018 MS.gene058701:CDS 35.0%
ATGTAGAGGGTTCCTATTAT+TGG - chr7.4:26450013-26450032 MS.gene058701:CDS 35.0%
CAATTAGAGGTTCATGTAGA+GGG - chr7.4:26450000-26450019 MS.gene058701:CDS 35.0%
CCAATGTGCTTTACAAATTG+TGG - chr7.4:26450605-26450624 MS.gene058701:CDS 35.0%
CCACAATTTGTAAAGCACAT+TGG + chr7.4:26450608-26450627 None:intergenic 35.0%
CTACATGAACCTCTAATTGT+AGG + chr7.4:26449999-26450018 None:intergenic 35.0%
GGATCTTATCCTACAATTAG+AGG - chr7.4:26449987-26450006 MS.gene058701:CDS 35.0%
TTTCCAGGAGAACAATCATT+TGG + chr7.4:26450437-26450456 None:intergenic 35.0%
! TATTTGTTTGTTGACACCAG+TGG + chr7.4:26450072-26450091 None:intergenic 35.0%
! TTTTTCTTTTCATCCTGCTC+TGG - chr7.4:26450574-26450593 MS.gene058701:CDS 35.0%
!! CTACAAGAGTATCATTCCTA+TGG - chr7.4:26450686-26450705 MS.gene058701:CDS 35.0%
!! TTCAAGTTGCTCTTTGGTTT+CGG - chr7.4:26450119-26450138 MS.gene058701:CDS 35.0%
AAAGTTGGGTCGTTCTTGAA+TGG - chr7.4:26450317-26450336 MS.gene058701:CDS 40.0%
ATAGTTGGACCAACTGATGA+TGG - chr7.4:26450632-26450651 MS.gene058701:CDS 40.0%
ATTGGAGAAAAATCCAGAGC+AGG + chr7.4:26450590-26450609 None:intergenic 40.0%
ATTGTAGGATAAGATCCGTG+AGG + chr7.4:26449984-26450003 None:intergenic 40.0%
CATAAAGTAACGGTCACCAT+AGG + chr7.4:26450705-26450724 None:intergenic 40.0%
CTATGTAATCATCACTTGGC+AGG + chr7.4:26450151-26450170 None:intergenic 40.0%
CTTCCAAATGATTGTTCTCC+TGG - chr7.4:26450431-26450450 MS.gene058701:CDS 40.0%
GAAGATCACAAGTCTATGTG+TGG + chr7.4:26449859-26449878 None:intergenic 40.0%
GCAAATGCGTCTGTAAGTTA+TGG - chr7.4:26449775-26449794 MS.gene058701:CDS 40.0%
GTAACATATGCCTCTACCTT+TGG - chr7.4:26450039-26450058 MS.gene058701:CDS 40.0%
TAGTTGGACCAACTGATGAT+GGG - chr7.4:26450633-26450652 MS.gene058701:CDS 40.0%
TCTTCCCGAAGAAGTGATTA+AGG - chr7.4:26449713-26449732 MS.gene058701:CDS 40.0%
TGATTAAGGAAATCCTGCTC+AGG - chr7.4:26449727-26449746 MS.gene058701:CDS 40.0%
! GAATGGTTCTATTCATTGGC+TGG - chr7.4:26450334-26450353 MS.gene058701:CDS 40.0%
! GAGCTTTTAGCACTCCTATA+AGG + chr7.4:26450284-26450303 None:intergenic 40.0%
ACTAATCCCCCATCATCAGT+TGG + chr7.4:26450644-26450663 None:intergenic 45.0%
ATCCGTGAGGCAAAAACTCA+AGG + chr7.4:26449971-26449990 None:intergenic 45.0%
ATTCTGTATACACCGCCGTT+TGG + chr7.4:26450733-26450752 None:intergenic 45.0%
CTGGCGGAATTATCAGTGTA+TGG - chr7.4:26450474-26450493 MS.gene058701:CDS 45.0%
CTTTATGAGTTCCCAAACGG+CGG - chr7.4:26450718-26450737 MS.gene058701:CDS 45.0%
TCTCTGCTTTCACTCTCCAA+TGG - chr7.4:26450752-26450771 MS.gene058701:CDS 45.0%
TTCTGTATACACCGCCGTTT+GGG + chr7.4:26450732-26450751 None:intergenic 45.0%
! AGCCTTGAGTTTTTGCCTCA+CGG - chr7.4:26449966-26449985 MS.gene058701:CDS 45.0%
! AGTTGGACCAACTGATGATG+GGG - chr7.4:26450634-26450653 MS.gene058701:CDS 45.0%
! TGGATGGATTCCAAAGGTAG+AGG + chr7.4:26450052-26450071 None:intergenic 45.0%
! TGTTTGTTGACACCAGTGGA+TGG + chr7.4:26450068-26450087 None:intergenic 45.0%
! TTAAGCTTGCTCAGTGCCAT+TGG + chr7.4:26450771-26450790 None:intergenic 45.0%
!! TACCTTTGGAATCCATCCAC+TGG - chr7.4:26450053-26450072 MS.gene058701:CDS 45.0%
CACAAGTCTATGTGTGGGTG+AGG + chr7.4:26449853-26449872 None:intergenic 50.0%
! CACCAGTGGATGGATTCCAA+AGG + chr7.4:26450058-26450077 None:intergenic 50.0%
!! GTTGGACCAACTGATGATGG+GGG - chr7.4:26450635-26450654 MS.gene058701:CDS 50.0%
CAGCGTAGCACAGACTTCAC+CGG + chr7.4:26449756-26449775 None:intergenic 55.0%
! GGAAATCCTGCTCAGGTTGC+CGG - chr7.4:26449734-26449753 MS.gene058701:CDS 55.0%
ACTTCACCGGCAACCTGAGC+AGG + chr7.4:26449743-26449762 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 26449693 26450790 26449693 ID=MS.gene058701
chr7.4 mRNA 26449693 26450790 26449693 ID=MS.gene058701.t1;Parent=MS.gene058701
chr7.4 exon 26449693 26450790 26449693 ID=MS.gene058701.t1.exon1;Parent=MS.gene058701.t1
chr7.4 CDS 26449693 26450790 26449693 ID=cds.MS.gene058701.t1;Parent=MS.gene058701.t1
Gene Sequence

>MS.gene058701

ATGGCGAAAAAGAGCGTGTATCTTCCCGAAGAAGTGATTAAGGAAATCCTGCTCAGGTTGCCGGTGAAGTCTGTGCTACGCTGCAAATGCGTCTGTAAGTTATGGCTTTCTATCATCTCTCATCCTCATTTTTCAACTTCACATTTTCAACTTGCTGCCTCACCCACACATAGACTTGTGATCTTCAAAGATTTTCATTCTAATCACGATCCTGAAACCCTATCCATAGATTTTAATATATCGCTCTATGATGATTCTGCTGATCATTCACTAAGCCTTGAGTTTTTGCCTCACGGATCTTATCCTACAATTAGAGGTTCATGTAGAGGGTTCCTATTATTGGACTGTAACATATGCCTCTACCTTTGGAATCCATCCACTGGTGTCAACAAACAAATACTTGTGTCCAATTCCAATAACAATTATTTCAAGTTGCTCTTTGGTTTCGGATACGACCTGCCAAGTGATGATTACATAGTAGTTTTGGGGTCCTACAAATACAGTTACAGTAATACTAATTCAATTAACTTGGAGATTTTTTCATTGAAAGCTAATAAGTGGAAACAAGTTAAGGTTGTTTCTGATTTTCCTTATAGGAGTGCTAAAAGCTCTGAATTTTGTTTCAAAGTTGGGTCGTTCTTGAATGGTTCTATTCATTGGCTGGTTTATAATTTTGTGACTGGGAAGGATGTTATTATTGCCTTTGATTTAAAGGAAGCAACAATGTCAGAGATAGCTCTTCCAAATGATTGTTCTCCTGGAAATTATGATTTGTTAATATCTGGCGGAATTATCAGTGTATGGAATGTGGAGATGTCTACAATTAAGATATGGGTGATGCAAGAATATGCAGTGCATTCATCTTGGACTAAGACTCTTGATTTTTCTTTTCATCCTGCTCTGGATTTTTCTCCAATGTGCTTTACAAATTGTGGTGATATAGTTGGACCAACTGATGATGGGGGATTAGTGAAGATTAATGACAAAGGACAACTACAAGAGTATCATTCCTATGGTGACCGTTACTTTATGAGTTCCCAAACGGCGGTGTATACAGAATCTCTGCTTTCACTCTCCAATGGCACTGAGCAAGCTTAA

Protein sequence

>MS.gene058701.t1

MAKKSVYLPEEVIKEILLRLPVKSVLRCKCVCKLWLSIISHPHFSTSHFQLAASPTHRLVIFKDFHSNHDPETLSIDFNISLYDDSADHSLSLEFLPHGSYPTIRGSCRGFLLLDCNICLYLWNPSTGVNKQILVSNSNNNYFKLLFGFGYDLPSDDYIVVLGSYKYSYSNTNSINLEIFSLKANKWKQVKVVSDFPYRSAKSSEFCFKVGSFLNGSIHWLVYNFVTGKDVIIAFDLKEATMSEIALPNDCSPGNYDLLISGGIISVWNVEMSTIKIWVMQEYAVHSSWTKTLDFSFHPALDFSPMCFTNCGDIVGPTDDGGLVKINDKGQLQEYHSYGDRYFMSSQTAVYTESLLSLSNGTEQA