AlfalfaGEDB | MS.gene68580

M. sativa cultivar XinJiangDaYe / MS.gene68580

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68580.t1	XP_013461772.1	61.5	169	61	3	1	166	210	377	3.40E-50	208

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68580.t1	A0A072V1V7	61.5	169	61	3	1	166	210	377	2.5e-50	208.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene035261	MS.gene68580	PPI
MS.gene063670	MS.gene68580	PPI
MS.gene68580	MS.gene58240	PPI
MS.gene71159	MS.gene68580	PPI
MS.gene019506	MS.gene68580	PPI
MS.gene68580	MS.gene27284	PPI
MS.gene77858	MS.gene68580	PPI
MS.gene058692	MS.gene68580	PPI
MS.gene041392	MS.gene68580	PPI
MS.gene68580	MS.gene063472	PPI
MS.gene68580	MS.gene57717	PPI
MS.gene68580	MS.gene034680	PPI
MS.gene033083	MS.gene68580	PPI
MS.gene68580	MS.gene48221	PPI
MS.gene69309	MS.gene68580	PPI
MS.gene63658	MS.gene68580	PPI
MS.gene024002	MS.gene68580	PPI
MS.gene033081	MS.gene68580	PPI
MS.gene68580	MS.gene066626	PPI
MS.gene68580	MS.gene063474	PPI
MS.gene035262	MS.gene68580	PPI
MS.gene034686	MS.gene68580	PPI
MS.gene68580	MS.gene51190	PPI
MS.gene68580	MS.gene58319	PPI
MS.gene40982	MS.gene68580	PPI
MS.gene68580	MS.gene044426	PPI
MS.gene070461	MS.gene68580	PPI
MS.gene68580	MS.gene034681	PPI
MS.gene51199	MS.gene68580	PPI
MS.gene68580	MS.gene57532	PPI
MS.gene68580	MS.gene033442	PPI
MS.gene87559	MS.gene68580	PPI
MS.gene68580	MS.gene009892	PPI
MS.gene033431	MS.gene68580	PPI
MS.gene24212	MS.gene68580	PPI
MS.gene68580	MS.gene058669	PPI
MS.gene68580	MS.gene066120	PPI
MS.gene041475	MS.gene68580	PPI
MS.gene81242	MS.gene68580	PPI
MS.gene68580	MS.gene041489	PPI
MS.gene64203	MS.gene68580	PPI
MS.gene68580	MS.gene024000	PPI
MS.gene68580	MS.gene034688	PPI
MS.gene060367	MS.gene68580	PPI
MS.gene68580	MS.gene24213	PPI
MS.gene51202	MS.gene68580	PPI
MS.gene059101	MS.gene68580	PPI
MS.gene68580	MS.gene033079	PPI
MS.gene68580	MS.gene034677	PPI
MS.gene68580	MS.gene055694	PPI
MS.gene68580	MS.gene059101	PPI
MS.gene68580	MS.gene035238	PPI
MS.gene064111	MS.gene68580	PPI
MS.gene68580	MS.gene064114	PPI
MS.gene68580	MS.gene87584	PPI
MS.gene26829	MS.gene68580	PPI
MS.gene064104	MS.gene68580	PPI
MS.gene053256	MS.gene68580	PPI
MS.gene68580	MS.gene58315	PPI
MS.gene68580	MS.gene80610	PPI
MS.gene75875	MS.gene68580	PPI
MS.gene54049	MS.gene68580	PPI
MS.gene50337	MS.gene68580	PPI
MS.gene43789	MS.gene68580	PPI
MS.gene68580	MS.gene90743	PPI
MS.gene50326	MS.gene68580	PPI
MS.gene68580	MS.gene85454	PPI
MS.gene072177	MS.gene68580	PPI
MS.gene58722	MS.gene68580	PPI
MS.gene064091	MS.gene68580	PPI
MS.gene68580	MS.gene036556	PPI
MS.gene033079	MS.gene68580	PPI
MS.gene24213	MS.gene68580	PPI
MS.gene43796	MS.gene68580	PPI
MS.gene58312	MS.gene68580	PPI
MS.gene36704	MS.gene68580	PPI
MS.gene68580	MS.gene058701	PPI
MS.gene68580	MS.gene064083	PPI
MS.gene036556	MS.gene68580	PPI
MS.gene58313	MS.gene68580	PPI
MS.gene066622	MS.gene68580	PPI
MS.gene44887	MS.gene68580	PPI
MS.gene68580	MS.gene58783	PPI
MS.gene85043	MS.gene68580	PPI
MS.gene68580	MS.gene024420	PPI
MS.gene39265	MS.gene68580	PPI
MS.gene63655	MS.gene68580	PPI
MS.gene033430	MS.gene68580	PPI
MS.gene44883	MS.gene68580	PPI
MS.gene68580	MS.gene024008	PPI
MS.gene68580	MS.gene50337	PPI
MS.gene68580	MS.gene54541	PPI
MS.gene68580	MS.gene39265	PPI
MS.gene036583	MS.gene68580	PPI
MS.gene88780	MS.gene68580	PPI
MS.gene41046	MS.gene68580	PPI
MS.gene68580	MS.gene053299	PPI
MS.gene87588	MS.gene68580	PPI
MS.gene055694	MS.gene68580	PPI
MS.gene017412	MS.gene68580	PPI
MS.gene68580	MS.gene28758	PPI
MS.gene68580	MS.gene044429	PPI
MS.gene68580	MS.gene42451	PPI
MS.gene96448	MS.gene68580	PPI
MS.gene51192	MS.gene68580	PPI
MS.gene009883	MS.gene68580	PPI
MS.gene58317	MS.gene68580	PPI
MS.gene68580	MS.gene69307	PPI
MS.gene044563	MS.gene68580	PPI
MS.gene069075	MS.gene68580	PPI
MS.gene033427	MS.gene68580	PPI
MS.gene40985	MS.gene68580	PPI
MS.gene031591	MS.gene68580	PPI
MS.gene041474	MS.gene68580	PPI
MS.gene58321	MS.gene68580	PPI
MS.gene041388	MS.gene68580	PPI
MS.gene062698	MS.gene68580	PPI
MS.gene57536	MS.gene68580	PPI
MS.gene96126	MS.gene68580	PPI
MS.gene019503	MS.gene68580	PPI
MS.gene016524	MS.gene68580	PPI
MS.gene50304	MS.gene68580	PPI
MS.gene68580	MS.gene40878	PPI
MS.gene59943	MS.gene68580	PPI
MS.gene68580	MS.gene44428	PPI
MS.gene51204	MS.gene68580	PPI
MS.gene31587	MS.gene68580	PPI
MS.gene036557	MS.gene68580	PPI
MS.gene041393	MS.gene68580	PPI
MS.gene033441	MS.gene68580	PPI
MS.gene68580	MS.gene035235	PPI
MS.gene68580	MS.gene058703	PPI
MS.gene063826	MS.gene68580	PPI
MS.gene68580	MS.gene012215	PPI
MS.gene84698	MS.gene68580	PPI
MS.gene44892	MS.gene68580	PPI
MS.gene009891	MS.gene68580	PPI
MS.gene58239	MS.gene68580	PPI
MS.gene066641	MS.gene68580	PPI
MS.gene68580	MS.gene22715	PPI
MS.gene000038	MS.gene68580	PPI
MS.gene68580	MS.gene58316	PPI
MS.gene57531	MS.gene68580	PPI
MS.gene68580	MS.gene51207	PPI
MS.gene68580	MS.gene58321	PPI
MS.gene39262	MS.gene68580	PPI
MS.gene68580	MS.gene87564	PPI
MS.gene68580	MS.gene36595	PPI
MS.gene57535	MS.gene68580	PPI
MS.gene025887	MS.gene68580	PPI
MS.gene019507	MS.gene68580	PPI
MS.gene041470	MS.gene68580	PPI
MS.gene058694	MS.gene68580	PPI
MS.gene064090	MS.gene68580	PPI
MS.gene68580	MS.gene061240	PPI
MS.gene058701	MS.gene68580	PPI
MS.gene68580	MS.gene041473	PPI
MS.gene015089	MS.gene68580	PPI
MS.gene006710	MS.gene68580	PPI
MS.gene68580	MS.gene50311	PPI
MS.gene90743	MS.gene68580	PPI
MS.gene68580	MS.gene058989	PPI
MS.gene44885	MS.gene68580	PPI
MS.gene011679	MS.gene68580	PPI
MS.gene68580	MS.gene57538	PPI
MS.gene68580	MS.gene041468	PPI
MS.gene060370	MS.gene68580	PPI
MS.gene68580	MS.gene058693	PPI
MS.gene68580	MS.gene27319	PPI
MS.gene64001	MS.gene68580	PPI
MS.gene68580	MS.gene041395	PPI
MS.gene57533	MS.gene68580	PPI
MS.gene68580	MS.gene42447	PPI
MS.gene68580	MS.gene51189	PPI
MS.gene032970	MS.gene68580	PPI
MS.gene77856	MS.gene68580	PPI
MS.gene68580	MS.gene044425	PPI
MS.gene40887	MS.gene68580	PPI
MS.gene50339	MS.gene68580	PPI
MS.gene034688	MS.gene68580	PPI
MS.gene51188	MS.gene68580	PPI
MS.gene060366	MS.gene68580	PPI
MS.gene68580	MS.gene40988	PPI
MS.gene68580	MS.gene24173	PPI
MS.gene68580	MS.gene036584	PPI
MS.gene68580	MS.gene27022	PPI
MS.gene57529	MS.gene68580	PPI
MS.gene80884	MS.gene68580	PPI
MS.gene68580	MS.gene87585	PPI
MS.gene68580	MS.gene023999	PPI
MS.gene40886	MS.gene68580	PPI
MS.gene40902	MS.gene68580	PPI
MS.gene27051	MS.gene68580	PPI
MS.gene68580	MS.gene036581	PPI
MS.gene68580	MS.gene019507	PPI
MS.gene060368	MS.gene68580	PPI
MS.gene033875	MS.gene68580	PPI
MS.gene27020	MS.gene68580	PPI
MS.gene066620	MS.gene68580	PPI
MS.gene035236	MS.gene68580	PPI
MS.gene68580	MS.gene000036	PPI
MS.gene68580	MS.gene50320	PPI
MS.gene68580	MS.gene58314	PPI
MS.gene68580	MS.gene87557	PPI
MS.gene059157	MS.gene68580	PPI
MS.gene68580	MS.gene035263	PPI
MS.gene51208	MS.gene68580	PPI
MS.gene68580	MS.gene67501	PPI
MS.gene028390	MS.gene68580	PPI
MS.gene011106	MS.gene68580	PPI
MS.gene68580	MS.gene96406	PPI
MS.gene62398	MS.gene68580	PPI
MS.gene68580	MS.gene053257	PPI
MS.gene60027	MS.gene68580	PPI
MS.gene68580	MS.gene51201	PPI
MS.gene045475	MS.gene68580	PPI
MS.gene038756	MS.gene68580	PPI
MS.gene88776	MS.gene68580	PPI
MS.gene68580	MS.gene50336	PPI
MS.gene35068	MS.gene68580	PPI
MS.gene041390	MS.gene68580	PPI
MS.gene90744	MS.gene68580	PPI
MS.gene24286	MS.gene68580	PPI
MS.gene92376	MS.gene68580	PPI
MS.gene000035	MS.gene68580	PPI
MS.gene68580	MS.gene77704	PPI
MS.gene50329	MS.gene68580	PPI
MS.gene070462	MS.gene68580	PPI
MS.gene31637	MS.gene68580	PPI
MS.gene87573	MS.gene68580	PPI
MS.gene68580	MS.gene047279	PPI
MS.gene57537	MS.gene68580	PPI
MS.gene68580	MS.gene50305	PPI
MS.gene019504	MS.gene68580	PPI
MS.gene034762	MS.gene68580	PPI
MS.gene68580	MS.gene032969	PPI
MS.gene059156	MS.gene68580	PPI
MS.gene68580	MS.gene68890	PPI
MS.gene68580	MS.gene42445	PPI
MS.gene68580	MS.gene86273	PPI
MS.gene82082	MS.gene68580	PPI
MS.gene68580	MS.gene26830	PPI
MS.gene033444	MS.gene68580	PPI
MS.gene50306	MS.gene68580	PPI
MS.gene68580	MS.gene63657	PPI
MS.gene68580	MS.gene059157	PPI
MS.gene68580	MS.gene023996	PPI
MS.gene26949	MS.gene68580	PPI
MS.gene68580	MS.gene045473	PPI
MS.gene50309	MS.gene68580	PPI
MS.gene68580	MS.gene50301	PPI
MS.gene68580	MS.gene070462	PPI
MS.gene87200	MS.gene68580	PPI
MS.gene58311	MS.gene68580	PPI
MS.gene68580	MS.gene031590	PPI
MS.gene033432	MS.gene68580	PPI
MS.gene68580	MS.gene066623	PPI
MS.gene68580	MS.gene064086	PPI
MS.gene68580	MS.gene035234	PPI
MS.gene68580	MS.gene064090	PPI
MS.gene59639	MS.gene68580	PPI
MS.gene50327	MS.gene68580	PPI
MS.gene066635	MS.gene68580	PPI
MS.gene68580	MS.gene90742	PPI
MS.gene68580	MS.gene24212	PPI
MS.gene68580	MS.gene50332	PPI
MS.gene68580	MS.gene024979	PPI
MS.gene010758	MS.gene68580	PPI
MS.gene87586	MS.gene68580	PPI
MS.gene57530	MS.gene68580	PPI
MS.gene066626	MS.gene68580	PPI
MS.gene68580	MS.gene24826	PPI
MS.gene51200	MS.gene68580	PPI
MS.gene68580	MS.gene43790	PPI
MS.gene046958	MS.gene68580	PPI
MS.gene88774	MS.gene68580	PPI
MS.gene68580	MS.gene59637	PPI
MS.gene42452	MS.gene68580	PPI
MS.gene68580	MS.gene88416	PPI
MS.gene063414	MS.gene68580	PPI
MS.gene68580	MS.gene003076	PPI
MS.gene68580	MS.gene024009	PPI
MS.gene68580	MS.gene036599	PPI
MS.gene036662	MS.gene68580	PPI
MS.gene87563	MS.gene68580	PPI
MS.gene57526	MS.gene68580	PPI
MS.gene68580	MS.gene006705	PPI
MS.gene68580	MS.gene061241	PPI
MS.gene021553	MS.gene68580	PPI
MS.gene68580	MS.gene035237	PPI
MS.gene051820	MS.gene68580	PPI
MS.gene26957	MS.gene68580	PPI
MS.gene97996	MS.gene68580	PPI
MS.gene68580	MS.gene51188	PPI
MS.gene036582	MS.gene68580	PPI
MS.gene27021	MS.gene68580	PPI
MS.gene035235	MS.gene68580	PPI
MS.gene58320	MS.gene68580	PPI
MS.gene26101	MS.gene68580	PPI
MS.gene27283	MS.gene68580	PPI
MS.gene68580	MS.gene38220	PPI
MS.gene68580	MS.gene40986	PPI
MS.gene045140	MS.gene68580	PPI
MS.gene68580	MS.gene041394	PPI
MS.gene024004	MS.gene68580	PPI
MS.gene58781	MS.gene68580	PPI
MS.gene42444	MS.gene68580	PPI
MS.gene57717	MS.gene68580	PPI
MS.gene68580	MS.gene03060	PPI
MS.gene68580	MS.gene036664	PPI
MS.gene033440	MS.gene68580	PPI
MS.gene68580	MS.gene024011	PPI
MS.gene68580	MS.gene58241	PPI
MS.gene44886	MS.gene68580	PPI
MS.gene87562	MS.gene68580	PPI
MS.gene066623	MS.gene68580	PPI
MS.gene68580	MS.gene064109	PPI
MS.gene68580	MS.gene058696	PPI
MS.gene68580	MS.gene009893	PPI
MS.gene40904	MS.gene68580	PPI
MS.gene87569	MS.gene68580	PPI
MS.gene041491	MS.gene68580	PPI
MS.gene033443	MS.gene68580	PPI
MS.gene059096	MS.gene68580	PPI
MS.gene57528	MS.gene68580	PPI
MS.gene50297	MS.gene68580	PPI
MS.gene68580	MS.gene40886	PPI
MS.gene006711	MS.gene68580	PPI
MS.gene27285	MS.gene68580	PPI
MS.gene68580	MS.gene036663	PPI
MS.gene58716	MS.gene68580	PPI
MS.gene019505	MS.gene68580	PPI
MS.gene064112	MS.gene68580	PPI
MS.gene68580	MS.gene041391	PPI
MS.gene045476	MS.gene68580	PPI
MS.gene58785	MS.gene68580	PPI
MS.gene24208	MS.gene68580	PPI
MS.gene68580	MS.gene57525	PPI
MS.gene50307	MS.gene68580	PPI
MS.gene034690	MS.gene68580	PPI
MS.gene044429	MS.gene68580	PPI
MS.gene066639	MS.gene68580	PPI
MS.gene68580	MS.gene030114	PPI
MS.gene96407	MS.gene68580	PPI
MS.gene036760	MS.gene68580	PPI
MS.gene68580	MS.gene045474	PPI
MS.gene77857	MS.gene68580	PPI
MS.gene68580	MS.gene036558	PPI
MS.gene57527	MS.gene68580	PPI
MS.gene51191	MS.gene68580	PPI
MS.gene68580	MS.gene87554	PPI
MS.gene68580	MS.gene40984	PPI
MS.gene68580	MS.gene064108	PPI
MS.gene68580	MS.gene048193	PPI
MS.gene033426	MS.gene68580	PPI
MS.gene68580	MS.gene016220	PPI
MS.gene50298	MS.gene68580	PPI
MS.gene67687	MS.gene68580	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68580.t1	MTR_3g103020	61.176	170	62	3	1	167	210	378	5.15e-65	203
MS.gene68580.t1	MTR_3g034180	60.355	169	62	3	1	167	324	489	4.00e-62	199
MS.gene68580.t1	MTR_4g116320	57.576	165	56	4	6	162	95	253	9.93e-58	181
MS.gene68580.t1	MTR_4g109270	60.248	161	60	3	10	167	205	364	1.02e-57	184
MS.gene68580.t1	MTR_6g060650	57.396	169	66	4	1	166	207	372	7.61e-57	182
MS.gene68580.t1	MTR_4g116330	56.805	169	67	4	4	167	213	380	6.13e-56	180
MS.gene68580.t1	MTR_3g034130	58.333	156	59	4	1	153	210	362	2.62e-54	176
MS.gene68580.t1	MTR_4g117720	56.977	172	62	6	1	163	205	373	2.65e-54	176
MS.gene68580.t1	MTR_4g122840	67.669	133	11	1	35	167	164	264	3.50e-54	172
MS.gene68580.t1	MTR_4g109280	58.025	162	61	4	10	167	201	359	1.62e-53	173
MS.gene68580.t1	MTR_4g023090	51.705	176	67	3	7	166	210	383	3.15e-53	173
MS.gene68580.t1	MTR_4g023130	60.000	160	57	5	10	166	157	312	4.85e-53	171
MS.gene68580.t1	MTR_8g040935	56.970	165	63	5	10	167	45	208	1.12e-52	167
MS.gene68580.t1	MTR_8g433030	56.548	168	65	6	1	163	174	338	2.78e-52	169
MS.gene68580.t1	MTR_3g034160	56.805	169	66	5	1	166	210	374	3.03e-52	171
MS.gene68580.t1	MTR_4g023080	58.750	160	59	5	10	166	198	353	3.27e-52	170
MS.gene68580.t1	MTR_8g032390	56.548	168	65	6	1	163	207	371	6.04e-52	169
MS.gene68580.t1	MTR_4g122850	58.182	165	63	6	7	167	202	364	2.47e-51	168
MS.gene68580.t1	MTR_6g463430	53.846	169	73	3	1	167	37	202	8.47e-51	162
MS.gene68580.t1	MTR_4g023070	54.913	173	59	5	10	166	200	369	1.59e-50	166
MS.gene68580.t1	MTR_4g117850	57.595	158	59	5	10	160	217	373	3.46e-50	165
MS.gene68580.t1	MTR_4g023380	50.802	187	64	5	7	167	195	379	3.18e-49	163
MS.gene68580.t1	MTR_5g097210	55.696	158	65	4	7	162	204	358	6.07e-48	159
MS.gene68580.t1	MTR_5g070080	55.844	154	65	2	12	163	229	381	6.24e-48	159
MS.gene68580.t1	MTR_4g094365	54.938	162	70	3	9	167	203	364	6.83e-48	159
MS.gene68580.t1	MTR_4g023120	54.023	174	61	6	10	167	200	370	1.78e-47	158
MS.gene68580.t1	MTR_5g070130	53.846	156	67	4	12	163	218	372	2.02e-46	155
MS.gene68580.t1	MTR_4g021785	55.625	160	64	5	10	166	199	354	2.08e-46	155
MS.gene68580.t1	MTR_4g023190	53.374	163	66	5	10	165	198	357	1.93e-45	152
MS.gene68580.t1	MTR_4g117780	54.268	164	70	3	9	167	204	367	4.80e-45	152
MS.gene68580.t1	MTR_4g117770	53.939	165	71	3	8	167	203	367	9.19e-45	151
MS.gene68580.t1	MTR_4g117810	53.939	165	71	3	8	167	203	367	9.19e-45	151
MS.gene68580.t1	MTR_4g023150	52.761	163	67	5	10	165	199	358	9.57e-45	150
MS.gene68580.t1	MTR_4g023200	50.920	163	70	5	10	165	199	358	7.76e-44	148
MS.gene68580.t1	MTR_4g118380	56.643	143	49	4	9	140	217	357	2.62e-43	147
MS.gene68580.t1	MTR_8g433040	52.976	168	64	5	2	167	210	364	2.82e-43	147
MS.gene68580.t1	MTR_8g032380	52.976	168	64	5	2	167	210	364	2.82e-43	147
MS.gene68580.t1	MTR_1g055175	49.367	158	73	6	13	166	46	200	1.32e-40	135
MS.gene68580.t1	MTR_1g055135	49.057	159	75	4	13	166	217	374	2.64e-40	139
MS.gene68580.t1	MTR_5g070088	53.595	153	66	5	15	163	230	381	6.15e-40	139
MS.gene68580.t1	MTR_1g055165	49.367	158	73	6	13	166	163	317	4.97e-39	135
MS.gene68580.t1	MTR_1g055195	50.327	153	70	4	12	161	323	472	1.03e-38	137
MS.gene68580.t1	MTR_4g118400	48.780	164	66	4	1	161	146	294	3.30e-38	132
MS.gene68580.t1	MTR_4g117870	55.814	129	53	4	41	167	141	267	5.30e-37	128
MS.gene68580.t1	MTR_7g079400	45.783	166	81	5	9	167	174	337	9.29e-37	129
MS.gene68580.t1	MTR_7g079370	47.205	161	81	3	9	167	198	356	1.04e-36	130
MS.gene68580.t1	MTR_4g117530	44.099	161	53	4	10	167	127	253	1.36e-34	122
MS.gene68580.t1	MTR_4g117750	48.171	164	72	4	12	166	199	358	1.92e-34	126
MS.gene68580.t1	MTR_4g117750	55.660	106	44	2	60	162	373	478	2.17e-27	107
MS.gene68580.t1	MTR_4g118370	46.154	156	59	5	12	164	124	257	3.57e-33	118
MS.gene68580.t1	MTR_4g023440	44.720	161	46	4	10	167	212	332	1.81e-32	118
MS.gene68580.t1	MTR_4g118360	53.636	110	46	3	55	161	13	120	1.11e-31	110
MS.gene68580.t1	MTR_8g102520	42.593	162	88	4	9	167	163	322	1.13e-31	115
MS.gene68580.t1	MTR_5g023000	56.566	99	40	2	72	167	1	99	1.70e-31	109
MS.gene68580.t1	MTR_1g055250	46.565	131	66	4	13	142	116	243	2.87e-31	115
MS.gene68580.t1	MTR_4g116330	41.420	169	54	4	4	167	213	341	8.36e-30	111
MS.gene68580.t1	MTR_7g079420	42.073	164	85	7	9	166	984	1143	4.04e-28	109
MS.gene68580.t1	MTR_4g122860	41.040	173	70	5	1	167	174	320	3.07e-27	104
MS.gene68580.t1	MTR_8g098830	43.077	130	71	2	9	137	68	195	8.17e-27	101
MS.gene68580.t1	MTR_4g121580	43.671	158	57	6	1	157	213	339	6.94e-26	101
MS.gene68580.t1	MTR_7g079450	41.497	147	69	5	28	167	1	137	1.87e-24	92.8
MS.gene68580.t1	MTR_7g117720	59.770	87	28	3	83	162	186	272	6.16e-22	89.4
MS.gene68580.t1	MTR_2g048580	36.196	163	89	5	9	167	191	342	2.42e-21	89.0
MS.gene68580.t1	MTR_4g023430	57.317	82	29	3	92	167	141	222	1.04e-20	85.1
MS.gene68580.t1	MTR_4g114700	50.526	95	41	3	70	158	124	218	2.40e-18	79.3
MS.gene68580.t1	MTR_4g117430	61.905	63	23	1	10	72	94	155	1.23e-17	75.5
MS.gene68580.t1	MTR_8g013010	57.971	69	24	1	1	69	246	309	1.46e-17	78.2
MS.gene68580.t1	MTR_8g013005	68.519	54	16	1	115	167	6	59	1.45e-16	70.1
MS.gene68580.t1	MTR_2g064960	64.286	42	15	0	126	167	18	59	4.55e-11	55.8
MS.gene68580.t1	MTR_4g109290	62.264	53	19	1	116	167	136	188	5.80e-11	58.5
MS.gene68580.t1	MTR_2g046830	27.206	136	90	2	10	137	220	354	9.13e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 35 sgRNAs with CRISPR-Local

Find 43 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATTGTTGCCTTTGATTTAA+CGG	0.272264	8.1:-8266800	MS.gene68580:CDS
TGGAGAATTTCTTAGTTTAT+CGG	0.313818	8.1:-8266701	MS.gene68580:CDS
GAGTCTCTACTTTCACTTCC+TGG	0.326582	8.1:-8266427	MS.gene68580:CDS
TCTTTACCGGGGCTATTCAT+TGG	0.344445	8.1:-8266855	MS.gene68580:CDS
TGAGTGATACAATTGAATTA+TGG	0.355506	8.1:-8266666	MS.gene68580:CDS
GGTGATATCATTGGAACAAA+TGG	0.406561	8.1:-8266544	MS.gene68580:CDS
GGCTTATCATCATGATTTAT+CGG	0.407804	8.1:-8266830	MS.gene68580:CDS
AATTGTGATTTGTGGGTGTC+TGG	0.408395	8.1:-8266721	MS.gene68580:CDS
GTGGTGAAGTACAATTATAA+AGG	0.417869	8.1:-8266514	MS.gene68580:CDS
TACCGGGGCTATTCATTGGT+TGG	0.429346	8.1:-8266851	MS.gene68580:CDS
ACCCACAAATCACAATTTAT+AGG	0.436272	8.1:+8266727	None:intergenic
GCTTCGAGTGATCGCACTCT+AGG	0.437226	8.1:-8266883	MS.gene68580:CDS
GAGTGATACAATTGAATTAT+GGG	0.441328	8.1:-8266665	MS.gene68580:CDS
TGGTGAAGTACAATTATAAA+GGG	0.476779	8.1:-8266513	MS.gene68580:CDS
TTTCCTTTCCGTTAAATCAA+AGG	0.478785	8.1:+8266792	None:intergenic
TACCTATAAATTGTGATTTG+TGG	0.478856	8.1:-8266729	MS.gene68580:CDS
ACCTATAAATTGTGATTTGT+GGG	0.488234	8.1:-8266728	MS.gene68580:CDS
ATGACCACTTGGGATCCATC+TGG	0.498070	8.1:+8266457	None:intergenic
AATACAAAGTCAATTCGTCT+TGG	0.507033	8.1:-8266633	MS.gene68580:CDS
ACATGGACAAAATCACCATC+TGG	0.527594	8.1:+8266751	None:intergenic
TAAACTTGCTCAGCGCCACC+AGG	0.536422	8.1:+8266409	None:intergenic
CTTCGAGTGATCGCACTCTA+GGG	0.546915	8.1:-8266882	MS.gene68580:CDS
TTAGAGATGCCTCTTCCAGA+TGG	0.562110	8.1:-8266766	MS.gene68580:CDS
TTGCCTTTGATTTAACGGAA+AGG	0.569675	8.1:-8266795	MS.gene68580:CDS
AGCCAACCAATGAATAGCCC+CGG	0.580401	8.1:+8266849	None:intergenic
ACTCTGTATACATGACCACT+TGG	0.585275	8.1:+8266446	None:intergenic
GATATCATTGGAACAAATGG+AGG	0.586188	8.1:-8266541	MS.gene68580:CDS
ACAAAATCACCATCTGGAAG+AGG	0.587693	8.1:+8266757	None:intergenic
AATCACAATTTATAGGTACA+TGG	0.595399	8.1:+8266734	None:intergenic
TCTTATTCTGATGATCCAGA+TGG	0.622390	8.1:-8266472	MS.gene68580:CDS
CTCTGTATACATGACCACTT+GGG	0.622804	8.1:+8266447	None:intergenic
TTATCATCATGATTTATCGG+TGG	0.672751	8.1:-8266827	MS.gene68580:CDS
TGGAACAAATGGAGGTAATG+TGG	0.673690	8.1:-8266533	MS.gene68580:CDS
TCTCTACTTTCACTTCCTGG+TGG	0.686381	8.1:-8266424	MS.gene68580:CDS
TGATCCAGATGGATCCCAAG+TGG	0.718470	8.1:-8266461	MS.gene68580:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AATCACAATTTATAGGTACA+TGG	+	chr8.1:8266566-8266585	None:intergenic	25.0%
!	GAGTGATACAATTGAATTAT+GGG	-	chr8.1:8266632-8266651	MS.gene68580:CDS	25.0%
!	TACCTATAAATTGTGATTTG+TGG	-	chr8.1:8266568-8266587	MS.gene68580:CDS	25.0%
!	TGAGTGATACAATTGAATTA+TGG	-	chr8.1:8266631-8266650	MS.gene68580:CDS	25.0%
!	TGGAGAATTTCTTAGTTTAT+CGG	-	chr8.1:8266596-8266615	MS.gene68580:CDS	25.0%
!	TGGTGAAGTACAATTATAAA+GGG	-	chr8.1:8266784-8266803	MS.gene68580:CDS	25.0%
!!	ACCTATAAATTGTGATTTGT+GGG	-	chr8.1:8266569-8266588	MS.gene68580:CDS	25.0%
	AATACAAAGTCAATTCGTCT+TGG	-	chr8.1:8266664-8266683	MS.gene68580:CDS	30.0%
	ACCCACAAATCACAATTTAT+AGG	+	chr8.1:8266573-8266592	None:intergenic	30.0%
	CCTATGTACTTTGCAAAAAA+CGG	-	chr8.1:8266732-8266751	MS.gene68580:CDS	30.0%
	GGCTTATCATCATGATTTAT+CGG	-	chr8.1:8266467-8266486	MS.gene68580:CDS	30.0%
	GTGGTGAAGTACAATTATAA+AGG	-	chr8.1:8266783-8266802	MS.gene68580:CDS	30.0%
	TTATCATCATGATTTATCGG+TGG	-	chr8.1:8266470-8266489	MS.gene68580:CDS	30.0%
	TTTCCTTTCCGTTAAATCAA+AGG	+	chr8.1:8266508-8266527	None:intergenic	30.0%
!	CATTGTTGCCTTTGATTTAA+CGG	-	chr8.1:8266497-8266516	MS.gene68580:CDS	30.0%
!!!	CGTTTTTTGCAAAGTACATA+GGG	+	chr8.1:8266734-8266753	None:intergenic	30.0%
!!!	GTTTTTTGCAAAGTACATAG+GGG	+	chr8.1:8266733-8266752	None:intergenic	30.0%
	GATATCATTGGAACAAATGG+AGG	-	chr8.1:8266756-8266775	MS.gene68580:CDS	35.0%
	GCAAAAAACGGTGATATCAT+TGG	-	chr8.1:8266744-8266763	MS.gene68580:CDS	35.0%
	GGTGATATCATTGGAACAAA+TGG	-	chr8.1:8266753-8266772	MS.gene68580:CDS	35.0%
	TCTTATTCTGATGATCCAGA+TGG	-	chr8.1:8266825-8266844	MS.gene68580:CDS	35.0%
!	TTGCCTTTGATTTAACGGAA+AGG	-	chr8.1:8266502-8266521	MS.gene68580:CDS	35.0%
!!!	CCGTTTTTTGCAAAGTACAT+AGG	+	chr8.1:8266735-8266754	None:intergenic	35.0%
	ACAAAATCACCATCTGGAAG+AGG	+	chr8.1:8266543-8266562	None:intergenic	40.0%
	ACATGGACAAAATCACCATC+TGG	+	chr8.1:8266549-8266568	None:intergenic	40.0%
	ACTCTGTATACATGACCACT+TGG	+	chr8.1:8266854-8266873	None:intergenic	40.0%
	CTCTGTATACATGACCACTT+GGG	+	chr8.1:8266853-8266872	None:intergenic	40.0%
	TGGAACAAATGGAGGTAATG+TGG	-	chr8.1:8266764-8266783	MS.gene68580:CDS	40.0%
!	AATTGTGATTTGTGGGTGTC+TGG	-	chr8.1:8266576-8266595	MS.gene68580:CDS	40.0%
!!!	ACTCTAGGGCTTTTCTTTAC+CGG	-	chr8.1:8266429-8266448	MS.gene68580:CDS	40.0%
	GAGTCTCTACTTTCACTTCC+TGG	-	chr8.1:8266870-8266889	MS.gene68580:CDS	45.0%
	TCTCTACTTTCACTTCCTGG+TGG	-	chr8.1:8266873-8266892	MS.gene68580:CDS	45.0%
	TCTTTACCGGGGCTATTCAT+TGG	-	chr8.1:8266442-8266461	MS.gene68580:CDS	45.0%
	TTAGAGATGCCTCTTCCAGA+TGG	-	chr8.1:8266531-8266550	MS.gene68580:CDS	45.0%
!!	TCTAGGGCTTTTCTTTACCG+GGG	-	chr8.1:8266431-8266450	MS.gene68580:CDS	45.0%
!!!	CTCTAGGGCTTTTCTTTACC+GGG	-	chr8.1:8266430-8266449	MS.gene68580:CDS	45.0%
	AGCCAACCAATGAATAGCCC+CGG	+	chr8.1:8266451-8266470	None:intergenic	50.0%
	ATGACCACTTGGGATCCATC+TGG	+	chr8.1:8266843-8266862	None:intergenic	50.0%
	CTTCGAGTGATCGCACTCTA+GGG	-	chr8.1:8266415-8266434	MS.gene68580:CDS	50.0%
	TACCGGGGCTATTCATTGGT+TGG	-	chr8.1:8266446-8266465	MS.gene68580:CDS	50.0%
	TGATCCAGATGGATCCCAAG+TGG	-	chr8.1:8266836-8266855	MS.gene68580:CDS	50.0%
	GCTTCGAGTGATCGCACTCT+AGG	-	chr8.1:8266414-8266433	MS.gene68580:CDS	55.0%
!	TAAACTTGCTCAGCGCCACC+AGG	+	chr8.1:8266891-8266910	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	8266408	8266911	8266408	ID=MS.gene68580
chr8.1	mRNA	8266408	8266911	8266408	ID=MS.gene68580.t1;Parent=MS.gene68580
chr8.1	exon	8266408	8266911	8266408	ID=MS.gene68580.t1.exon1;Parent=MS.gene68580.t1
chr8.1	CDS	8266408	8266911	8266408	ID=cds.MS.gene68580.t1;Parent=MS.gene68580.t1

Gene Sequence

>MS.gene68580

ATGGATGCTTCGAGTGATCGCACTCTAGGGCTTTTCTTTACCGGGGCTATTCATTGGTTGGCTTATCATCATGATTTATCGGTGGATGTCATTGTTGCCTTTGATTTAACGGAAAGGAAACTTTTAGAGATGCCTCTTCCAGATGGTGATTTTGTCCATGTACCTATAAATTGTGATTTGTGGGTGTCTGGAGAATTTCTTAGTTTATCGGCTATTGATTATGTGAGTGATACAATTGAATTATGGGTGATGAAAGAATACAAAGTCAATTCGTCTTGGACTAAAACTCTTGTTATTCACATTGATAATGTCGCTTACTTTTCCCCTATGTACTTTGCAAAAAACGGTGATATCATTGGAACAAATGGAGGTAATGTGGTGAAGTACAATTATAAAGGGCAGTTGTTAGATCATCGCTCTTATTCTGATGATCCAGATGGATCCCAAGTGGTCATGTATACAGAGTCTCTACTTTCACTTCCTGGTGGCGCTGAGCAAGTTTAA

Protein sequence

>MS.gene68580.t1

MDASSDRTLGLFFTGAIHWLAYHHDLSVDVIVAFDLTERKLLEMPLPDGDFVHVPINCDLWVSGEFLSLSAIDYVSDTIELWVMKEYKVNSSWTKTLVIHIDNVAYFSPMYFAKNGDIIGTNGGNVVKYNYKGQLLDHRSYSDDPDGSQVVMYTESLLSLPGGAEQV