AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene019506


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene019506.t1 MTR_8g433040 69.972 363 90 4 1 356 9 359 1.84e-171 482
MS.gene019506.t1 MTR_8g032380 69.972 363 90 4 1 356 9 359 1.84e-171 482
MS.gene019506.t1 MTR_8g032390 64.835 364 96 6 1 356 31 370 4.97e-150 428
MS.gene019506.t1 MTR_8g433030 56.044 364 95 7 1 356 31 337 3.49e-119 348
MS.gene019506.t1 MTR_4g122850 55.085 354 135 14 21 356 12 359 1.19e-108 323
MS.gene019506.t1 MTR_3g103020 52.486 362 149 10 10 356 20 373 1.74e-108 322
MS.gene019506.t1 MTR_4g021785 52.113 355 149 9 10 356 9 350 7.06e-107 317
MS.gene019506.t1 MTR_4g023080 51.821 357 146 11 10 356 9 349 6.37e-105 312
MS.gene019506.t1 MTR_4g109270 51.491 369 142 12 9 356 7 359 2.12e-104 311
MS.gene019506.t1 MTR_4g094365 51.240 363 158 9 5 355 3 358 2.08e-103 309
MS.gene019506.t1 MTR_4g023090 49.062 373 157 10 10 357 16 380 6.58e-102 306
MS.gene019506.t1 MTR_4g117850 51.781 365 144 10 9 354 22 373 2.08e-101 304
MS.gene019506.t1 MTR_3g034180 50.802 374 145 14 10 356 123 484 1.85e-100 306
MS.gene019506.t1 MTR_3g034130 52.422 351 127 14 10 333 9 346 2.06e-99 299
MS.gene019506.t1 MTR_4g023070 48.800 375 154 11 9 356 2 365 4.43e-98 296
MS.gene019506.t1 MTR_6g060650 51.491 369 147 12 10 355 8 367 2.21e-97 294
MS.gene019506.t1 MTR_4g117780 48.209 363 163 11 9 356 10 362 1.00e-95 290
MS.gene019506.t1 MTR_3g034160 50.943 371 149 12 10 356 9 370 1.07e-95 290
MS.gene019506.t1 MTR_4g109280 50.549 364 152 12 5 354 3 352 1.76e-95 288
MS.gene019506.t1 MTR_4g116330 49.311 363 158 12 10 356 23 375 6.91e-93 283
MS.gene019506.t1 MTR_4g117770 49.036 363 160 11 9 356 10 362 3.22e-92 280
MS.gene019506.t1 MTR_4g117810 49.036 363 160 11 9 356 10 362 3.22e-92 280
MS.gene019506.t1 MTR_4g118380 50.141 355 140 10 10 334 8 355 4.05e-92 280
MS.gene019506.t1 MTR_4g023120 45.867 375 165 10 9 356 2 365 4.63e-92 280
MS.gene019506.t1 MTR_4g023380 47.230 379 148 10 10 357 16 373 4.81e-92 280
MS.gene019506.t1 MTR_4g023130 47.592 353 126 11 10 356 9 308 4.68e-90 273
MS.gene019506.t1 MTR_5g070130 47.838 370 159 14 10 355 11 370 3.71e-89 273
MS.gene019506.t1 MTR_5g097210 45.526 380 175 12 1 363 1 365 2.60e-87 268
MS.gene019506.t1 MTR_4g023190 48.118 372 159 12 1 356 1 354 3.03e-87 267
MS.gene019506.t1 MTR_1g055135 45.799 369 167 12 10 356 13 370 2.31e-85 263
MS.gene019506.t1 MTR_4g023150 47.849 372 161 13 1 356 1 355 4.73e-85 262
MS.gene019506.t1 MTR_4g117720 45.822 371 142 11 1 355 44 371 2.21e-84 261
MS.gene019506.t1 MTR_5g070080 44.186 387 160 15 10 356 10 380 4.98e-84 260
MS.gene019506.t1 MTR_4g023200 46.418 349 154 12 24 356 24 355 4.74e-82 254
MS.gene019506.t1 MTR_4g121580 45.479 365 152 13 3 350 4 338 2.77e-79 248
MS.gene019506.t1 MTR_5g070088 43.257 393 170 14 4 356 1 380 2.58e-78 245
MS.gene019506.t1 MTR_4g023440 45.404 359 135 11 10 356 18 327 6.65e-76 238
MS.gene019506.t1 MTR_4g117750 47.011 368 156 14 10 355 3 353 3.99e-74 238
MS.gene019506.t1 MTR_4g117750 53.774 106 43 2 257 356 373 478 1.03e-24 105
MS.gene019506.t1 MTR_8g013010 51.471 272 111 9 5 266 49 309 3.38e-72 228
MS.gene019506.t1 MTR_4g116330 43.526 363 140 12 10 356 23 336 1.21e-69 222
MS.gene019506.t1 MTR_1g055165 40.164 366 156 9 1 356 1 313 1.53e-68 218
MS.gene019506.t1 MTR_4g117870 43.729 295 113 8 73 356 10 262 6.16e-64 204
MS.gene019506.t1 MTR_7g079370 41.471 340 171 13 39 355 16 350 1.27e-59 196
MS.gene019506.t1 MTR_1g055195 46.316 285 119 11 87 355 206 472 1.50e-58 197
MS.gene019506.t1 MTR_7g079400 45.788 273 124 9 101 356 67 332 1.03e-55 186
MS.gene019506.t1 MTR_4g118400 44.245 278 103 9 89 355 58 294 5.37e-55 182
MS.gene019506.t1 MTR_4g116340 46.862 239 98 6 3 232 29 247 4.33e-54 179
MS.gene019506.t1 MTR_4g116320 50.467 214 90 5 154 355 43 252 1.80e-53 177
MS.gene019506.t1 MTR_6g463430 53.476 187 78 6 174 356 16 197 1.29e-51 171
MS.gene019506.t1 MTR_8g040935 49.000 200 91 4 166 356 6 203 6.16e-50 166
MS.gene019506.t1 MTR_8g102520 36.364 363 162 13 9 355 7 316 2.12e-49 169
MS.gene019506.t1 MTR_2g048580 36.216 370 173 17 10 356 8 337 3.08e-48 166
MS.gene019506.t1 MTR_1g055175 46.907 194 84 6 174 355 9 195 1.67e-43 149
MS.gene019506.t1 MTR_7g117720 44.976 209 87 5 1 200 1 190 7.92e-43 150
MS.gene019506.t1 MTR_7g117720 45.977 87 37 3 280 356 186 272 2.05e-11 64.3
MS.gene019506.t1 MTR_4g118370 41.732 254 97 8 120 355 34 254 1.13e-42 149
MS.gene019506.t1 MTR_4g117530 40.586 239 99 7 124 356 47 248 1.62e-40 143
MS.gene019506.t1 MTR_4g117430 51.250 160 68 5 107 266 3 152 1.09e-39 138
MS.gene019506.t1 MTR_1g055250 42.925 212 106 7 147 348 47 253 1.39e-38 140
MS.gene019506.t1 MTR_7g079420 38.636 264 118 11 106 355 905 1138 2.50e-33 131
MS.gene019506.t1 MTR_1g097560 30.748 361 210 15 10 353 36 373 8.75e-31 120
MS.gene019506.t1 MTR_4g114700 34.884 258 104 6 107 350 9 216 5.87e-30 115
MS.gene019506.t1 MTR_1g097490 31.856 361 210 16 10 353 49 390 9.73e-30 118
MS.gene019506.t1 MTR_8g098830 42.857 182 83 8 164 334 25 196 1.37e-29 114
MS.gene019506.t1 MTR_4g055060 33.441 311 170 14 10 299 30 324 1.02e-28 115
MS.gene019506.t1 MTR_3g009310 33.119 311 164 15 10 299 42 329 1.29e-28 115
MS.gene019506.t1 MTR_3g013740 32.087 321 174 14 4 296 38 342 1.57e-28 115
MS.gene019506.t1 MTR_3g007330 33.003 303 168 12 9 297 47 328 2.17e-28 114
MS.gene019506.t1 MTR_4g107820 30.625 320 157 13 7 296 33 317 4.70e-28 113
MS.gene019506.t1 MTR_4g107780 30.625 320 157 13 7 296 33 317 4.70e-28 113
MS.gene019506.t1 MTR_4g107820 30.625 320 157 13 7 296 33 317 6.36e-28 113
MS.gene019506.t1 MTR_4g107780 30.625 320 157 13 7 296 33 317 6.82e-28 113
MS.gene019506.t1 MTR_8g101580 28.533 375 222 18 5 353 40 394 3.21e-27 111
MS.gene019506.t1 MTR_5g011200 29.260 311 194 10 10 306 17 315 4.57e-27 110
MS.gene019506.t1 MTR_3g014540 30.693 303 178 10 10 296 29 315 1.16e-26 109
MS.gene019506.t1 MTR_7g407070 30.599 317 181 12 10 297 32 338 1.80e-26 109
MS.gene019506.t1 MTR_2g426020 28.792 389 228 16 6 355 2 380 4.35e-26 108
MS.gene019506.t1 MTR_4g108820 30.822 292 152 10 10 296 42 288 5.22e-26 106
MS.gene019506.t1 MTR_5g022420 31.313 297 171 15 10 296 27 300 1.45e-25 106
MS.gene019506.t1 MTR_3g007410 30.233 301 178 11 13 297 55 339 1.63e-25 106
MS.gene019506.t1 MTR_3g007360 29.494 356 217 13 13 351 55 393 1.84e-25 106
MS.gene019506.t1 MTR_3g006570 28.021 389 211 17 10 359 21 379 2.55e-25 105
MS.gene019506.t1 MTR_3g013770 29.582 311 181 9 10 299 33 326 2.59e-25 105
MS.gene019506.t1 MTR_3g014570 31.546 317 159 14 10 297 29 316 2.91e-25 105
MS.gene019506.t1 MTR_3g083640 29.236 301 172 13 9 292 54 330 3.15e-25 105
MS.gene019506.t1 MTR_5g057710 30.844 308 169 12 10 296 46 330 3.69e-25 105
MS.gene019506.t1 MTR_4g133170 29.141 326 180 16 9 309 3 302 1.10e-24 103
MS.gene019506.t1 MTR_3g010390 30.094 319 177 15 10 297 33 336 1.21e-24 103
MS.gene019506.t1 MTR_4g118360 53.333 105 41 3 257 355 18 120 1.52e-24 97.4
MS.gene019506.t1 MTR_4g109290 42.857 161 51 7 9 163 8 133 2.79e-24 98.6
MS.gene019506.t1 MTR_5g057790 30.921 304 174 14 10 296 46 330 3.28e-24 102
MS.gene019506.t1 MTR_3g436150 29.260 311 189 11 9 297 31 332 3.41e-24 102
MS.gene019506.t1 MTR_5g007610 30.094 319 170 13 10 297 41 337 4.26e-24 102
MS.gene019506.t1 MTR_1g054725 27.586 377 221 16 9 353 19 375 5.14e-24 102
MS.gene019506.t1 MTR_1g055070 30.000 260 153 9 10 245 49 303 5.44e-24 102
MS.gene019506.t1 MTR_2g021150 29.126 309 185 15 10 299 14 307 5.74e-24 101
MS.gene019506.t1 MTR_5g069120 39.106 179 93 6 20 183 1 178 7.66e-24 97.1
MS.gene019506.t1 MTR_0044s0300 29.276 304 170 15 9 292 37 315 1.01e-23 101
MS.gene019506.t1 MTR_3g011060 30.745 322 173 13 9 300 27 328 1.57e-23 100
MS.gene019506.t1 MTR_5g023000 60.638 94 29 4 270 356 2 94 2.62e-23 93.2
MS.gene019506.t1 MTR_3g083010 27.475 404 225 20 10 357 6 397 2.64e-23 100
MS.gene019506.t1 MTR_7g079450 46.667 135 63 4 226 355 1 131 2.95e-23 94.4
MS.gene019506.t1 MTR_1g050542 29.236 301 178 10 10 297 58 336 3.55e-23 100
MS.gene019506.t1 MTR_0667s0010 27.930 401 216 18 6 355 2 380 3.76e-23 100
MS.gene019506.t1 MTR_8g467140 27.891 294 197 8 10 296 32 317 3.78e-23 99.0
MS.gene019506.t1 MTR_2g029990 28.075 374 224 16 11 359 52 405 3.95e-23 99.8
MS.gene019506.t1 MTR_3g036290 32.441 299 169 15 10 299 22 296 4.29e-23 99.4
MS.gene019506.t1 MTR_2g425980 28.499 393 219 20 9 355 4 380 4.39e-23 99.8
MS.gene019506.t1 MTR_3g036430 26.490 302 173 12 1 292 7 269 4.59e-23 99.0
MS.gene019506.t1 MTR_3g010870 27.027 370 222 14 10 353 37 384 5.57e-23 99.4
MS.gene019506.t1 MTR_6g065980 29.514 288 179 11 9 292 15 282 9.93e-23 98.2
MS.gene019506.t1 MTR_5g057690 29.470 302 171 10 10 296 46 320 1.01e-22 98.6
MS.gene019506.t1 MTR_2g046920 29.431 299 184 13 10 296 24 307 1.05e-22 98.2
MS.gene019506.t1 MTR_2g021770 27.820 399 227 14 12 356 14 405 1.12e-22 98.6
MS.gene019506.t1 MTR_0760s0010 29.965 287 170 11 17 293 54 319 1.17e-22 98.6
MS.gene019506.t1 MTR_3g006670 29.677 310 179 12 10 299 49 339 1.25e-22 98.6
MS.gene019506.t1 MTR_8g099460 27.990 393 215 20 7 355 2 370 1.33e-22 98.2
MS.gene019506.t1 MTR_4g122860 36.702 188 78 6 179 355 157 314 1.51e-22 97.4
MS.gene019506.t1 MTR_2g028130 26.633 398 229 16 10 355 5 391 1.53e-22 98.2
MS.gene019506.t1 MTR_1g094210 27.419 372 212 16 10 353 57 398 1.94e-22 97.8
MS.gene019506.t1 MTR_6g017280 28.483 323 194 11 2 297 1 313 2.35e-22 97.4
MS.gene019506.t1 MTR_3g030350 28.522 291 189 10 9 292 34 312 3.37e-22 97.1
MS.gene019506.t1 MTR_3g009260 30.450 289 180 11 10 292 41 314 3.78e-22 97.1
MS.gene019506.t1 MTR_2g078900 29.180 305 168 12 9 292 32 309 4.54e-22 96.3
MS.gene019506.t1 MTR_1g094210 27.616 344 192 15 10 326 57 370 4.70e-22 97.1
MS.gene019506.t1 MTR_7g062100 32.039 309 171 15 10 292 24 319 5.73e-22 96.7
MS.gene019506.t1 MTR_6g021880 30.717 293 171 11 21 292 31 312 5.84e-22 96.3
MS.gene019506.t1 MTR_4g030830 28.012 332 172 12 10 297 9 317 6.76e-22 96.3
MS.gene019506.t1 MTR_7g007300 27.797 295 178 8 10 292 103 374 7.70e-22 96.7
MS.gene019506.t1 MTR_5g057020 29.392 296 174 11 10 296 46 315 8.28e-22 95.5
MS.gene019506.t1 MTR_0064s0160 26.776 366 211 15 10 336 42 389 8.94e-22 96.3
MS.gene019506.t1 MTR_2g055970 28.428 299 189 10 10 296 211 496 1.04e-21 96.7
MS.gene019506.t1 MTR_3g007430 26.488 336 207 9 13 327 46 362 1.14e-21 95.5
MS.gene019506.t1 MTR_1g097330 29.153 295 188 9 10 296 16 297 1.14e-21 95.9
MS.gene019506.t1 MTR_3g010970 29.412 306 164 13 13 299 51 323 1.29e-21 95.5
MS.gene019506.t1 MTR_4g061340 31.288 326 153 16 9 297 25 316 1.33e-21 95.1
MS.gene019506.t1 MTR_1g068835 28.763 299 184 12 9 292 3 287 1.36e-21 95.1
MS.gene019506.t1 MTR_6g034720 48.649 111 47 3 149 253 73 179 1.74e-21 91.7
MS.gene019506.t1 MTR_2g024110 27.090 299 191 12 9 292 3 289 1.83e-21 94.7
MS.gene019506.t1 MTR_4g030090 29.582 311 180 12 11 292 15 315 2.72e-21 94.7
MS.gene019506.t1 MTR_3g009240 29.592 294 179 10 10 292 36 312 3.93e-21 94.0
MS.gene019506.t1 MTR_4g031770 27.815 302 179 10 10 292 4 285 3.99e-21 93.6
MS.gene019506.t1 MTR_7g445890 27.707 314 166 13 10 292 16 299 4.24e-21 94.0
MS.gene019506.t1 MTR_3g024110 28.188 298 176 11 9 292 100 373 5.32e-21 94.4
MS.gene019506.t1 MTR_0115s0020 25.697 323 204 10 9 299 9 327 5.39e-21 93.6
MS.gene019506.t1 MTR_3g023930 26.741 359 207 14 10 357 34 347 8.08e-21 92.8
MS.gene019506.t1 MTR_4g129190 29.730 222 136 8 9 218 5 218 9.76e-21 92.8
MS.gene019506.t1 MTR_1g115160 27.922 308 187 12 4 299 16 300 1.01e-20 92.4
MS.gene019506.t1 MTR_3g036335 29.545 308 176 12 10 297 41 327 1.21e-20 92.8
MS.gene019506.t1 MTR_2g028110 27.467 375 228 16 9 355 3 361 1.28e-20 92.4
MS.gene019506.t1 MTR_2g426070 26.575 365 218 14 11 336 7 360 1.56e-20 92.4
MS.gene019506.t1 MTR_5g046300 28.333 300 174 15 10 292 4 279 1.57e-20 91.7
MS.gene019506.t1 MTR_5g046290 28.333 300 174 15 10 292 4 279 1.57e-20 91.7
MS.gene019506.t1 MTR_2g028160 27.342 395 229 20 10 355 5 390 1.88e-20 92.4
MS.gene019506.t1 MTR_4g013180 30.675 326 180 15 5 297 6 318 2.10e-20 92.4
MS.gene019506.t1 MTR_2g426090 28.435 313 178 15 12 292 8 306 2.73e-20 91.7
MS.gene019506.t1 MTR_3g011100 28.896 308 183 11 10 297 235 526 3.05e-20 92.4
MS.gene019506.t1 MTR_6g090180 28.191 376 211 13 10 335 47 413 3.44e-20 91.7
MS.gene019506.t1 MTR_0097s0030 26.006 323 196 8 2 297 6 312 3.63e-20 91.3
MS.gene019506.t1 MTR_2g047240 26.006 323 196 8 2 297 6 312 3.63e-20 91.3
MS.gene019506.t1 MTR_7g070830 29.290 338 181 14 10 297 21 350 3.67e-20 91.7
MS.gene019506.t1 MTR_3g007270 27.812 320 181 15 10 299 47 346 3.70e-20 91.3
MS.gene019506.t1 MTR_3g024150 30.693 303 159 15 13 292 38 312 3.90e-20 91.3
MS.gene019506.t1 MTR_7g070440 29.375 320 168 14 13 297 10 306 4.76e-20 90.9
MS.gene019506.t1 MTR_2g426060 26.904 394 229 18 6 355 2 380 4.81e-20 90.9
MS.gene019506.t1 MTR_2g021155 31.475 305 158 14 13 292 39 317 5.07e-20 92.0
MS.gene019506.t1 MTR_1g056710 28.239 301 178 10 10 292 34 314 5.08e-20 90.9
MS.gene019506.t1 MTR_0128s0020 29.487 312 187 13 10 297 18 320 5.54e-20 90.9
MS.gene019506.t1 MTR_7g077970 28.319 339 181 13 8 297 2 327 5.93e-20 90.9
MS.gene019506.t1 MTR_2g031720 28.346 381 221 18 10 356 6 368 5.97e-20 90.5
MS.gene019506.t1 MTR_7g056003 27.217 327 175 11 13 297 18 323 5.99e-20 90.9
MS.gene019506.t1 MTR_3g464470 28.000 325 185 11 10 303 7 313 7.80e-20 90.1
MS.gene019506.t1 MTR_2g021252 27.211 294 173 11 13 292 50 316 8.70e-20 90.1
MS.gene019506.t1 MTR_2g026010 27.720 386 217 17 9 355 3 365 9.31e-20 90.1
MS.gene019506.t1 MTR_3g072470 29.762 336 160 18 13 297 22 332 1.08e-19 90.1
MS.gene019506.t1 MTR_3g030240 26.554 354 198 13 10 347 40 347 1.27e-19 89.4
MS.gene019506.t1 MTR_2g024100 29.032 310 175 14 14 292 11 306 1.62e-19 89.4
MS.gene019506.t1 MTR_3g030250 25.278 360 220 13 10 357 37 359 1.73e-19 89.4
MS.gene019506.t1 MTR_1g054575 28.479 309 170 15 10 296 52 331 1.82e-19 90.1
MS.gene019506.t1 MTR_7g078860 29.697 330 172 14 10 297 9 320 1.85e-19 89.4
MS.gene019506.t1 MTR_4g037465 30.745 322 169 15 10 297 21 322 2.03e-19 89.0
MS.gene019506.t1 MTR_1g068875 25.946 370 237 16 9 355 3 358 2.07e-19 89.0
MS.gene019506.t1 MTR_3g010520 26.989 352 196 14 10 347 25 329 2.53e-19 88.6
MS.gene019506.t1 MTR_7g070880 28.650 363 193 16 10 314 21 375 2.67e-19 89.0
MS.gene019506.t1 MTR_4g024890 27.950 322 175 15 11 297 11 310 3.37e-19 88.2
MS.gene019506.t1 MTR_3g010920 26.685 371 212 15 10 353 44 381 3.46e-19 88.2
MS.gene019506.t1 MTR_2g104340 27.390 387 237 17 9 356 13 394 3.94e-19 88.2
MS.gene019506.t1 MTR_4g019990 27.492 331 189 12 4 297 1 317 4.90e-19 87.8
MS.gene019506.t1 MTR_6g027910 25.974 385 228 18 13 359 12 377 4.95e-19 87.8
MS.gene019506.t1 MTR_8g073550 33.178 214 103 11 10 198 30 228 7.28e-19 85.1
MS.gene019506.t1 MTR_0464s0020 27.795 331 181 12 13 297 26 344 8.58e-19 87.4
MS.gene019506.t1 MTR_2g031640 26.801 347 200 17 10 328 6 326 9.61e-19 87.0
MS.gene019506.t1 MTR_7g091630 27.160 324 205 10 2 297 24 344 1.03e-18 87.4
MS.gene019506.t1 MTR_6g004660 29.167 312 185 13 10 297 16 315 1.16e-18 86.7
MS.gene019506.t1 MTR_3g010620 27.187 320 184 13 13 317 39 324 1.62e-18 86.3
MS.gene019506.t1 MTR_0242s0060 30.275 327 177 16 10 296 9 324 1.74e-18 86.7
MS.gene019506.t1 MTR_0242s0040 30.275 327 177 16 10 296 9 324 1.74e-18 86.7
MS.gene019506.t1 MTR_8g062660 27.062 388 219 18 10 359 22 383 2.00e-18 87.0
MS.gene019506.t1 MTR_2g031680 25.260 384 234 17 10 363 6 366 2.43e-18 85.9
MS.gene019506.t1 MTR_3g011020 28.431 306 172 11 10 296 28 305 2.51e-18 85.9
MS.gene019506.t1 MTR_1g068860 27.907 301 186 13 9 292 3 289 2.71e-18 85.5
MS.gene019506.t1 MTR_2g046900 28.383 303 190 12 10 296 28 319 2.77e-18 85.9
MS.gene019506.t1 MTR_4g030790 28.383 303 147 13 10 288 19 275 2.93e-18 85.1
MS.gene019506.t1 MTR_2g021190 28.431 306 174 13 10 292 21 304 3.17e-18 85.5
MS.gene019506.t1 MTR_4g129160 28.406 345 181 15 4 297 1 330 3.19e-18 85.1
MS.gene019506.t1 MTR_3g024040 30.584 291 169 15 17 297 38 305 3.20e-18 85.5
MS.gene019506.t1 MTR_2g028140 24.311 399 235 17 10 355 5 389 3.28e-18 85.9
MS.gene019506.t1 MTR_7g055987 27.974 311 176 12 13 297 23 311 3.62e-18 85.1
MS.gene019506.t1 MTR_3g010590 29.097 299 165 15 10 292 39 306 4.32e-18 85.1
MS.gene019506.t1 MTR_5g096710 30.255 314 172 14 10 292 23 320 4.53e-18 85.1
MS.gene019506.t1 MTR_6g048140 29.870 308 170 14 9 292 38 323 5.04e-18 85.1
MS.gene019506.t1 MTR_2g021800 24.812 399 238 13 9 350 15 408 5.46e-18 85.1
MS.gene019506.t1 MTR_5g046260 26.552 290 162 12 10 292 4 249 5.47e-18 83.6
MS.gene019506.t1 MTR_5g069760 27.157 313 197 12 4 297 1 301 5.85e-18 84.7
MS.gene019506.t1 MTR_7g055870 29.377 337 183 14 13 299 16 347 7.17e-18 84.7
MS.gene019506.t1 MTR_3g010430 27.302 315 165 12 10 292 36 318 7.37e-18 84.7
MS.gene019506.t1 MTR_2g078850 28.882 322 178 16 13 310 33 327 7.42e-18 84.3
MS.gene019506.t1 MTR_7g028660 27.987 318 186 9 10 297 11 315 8.17e-18 84.3
MS.gene019506.t1 MTR_5g069390 23.632 402 242 14 9 356 25 415 8.80e-18 84.7
MS.gene019506.t1 MTR_5g009060 30.030 333 176 16 10 298 25 344 9.41e-18 84.3
MS.gene019506.t1 MTR_0128s0070 28.155 309 190 12 9 294 21 320 1.09e-17 84.0
MS.gene019506.t1 MTR_7g056390 28.527 319 187 13 13 297 21 332 1.22e-17 84.0
MS.gene019506.t1 MTR_7g056503 26.101 318 194 12 10 297 21 327 1.30e-17 84.0
MS.gene019506.t1 MTR_6g007135 25.641 351 220 13 10 330 26 365 1.57e-17 83.6
MS.gene019506.t1 MTR_2g043410 28.660 321 179 12 13 297 25 331 1.96e-17 83.6
MS.gene019506.t1 MTR_3g030330 28.041 296 177 11 10 292 20 292 2.02e-17 83.2
MS.gene019506.t1 MTR_4g023430 48.624 109 47 4 1 105 32 135 2.69e-17 80.5
MS.gene019506.t1 MTR_7g056290 27.523 327 180 13 13 297 25 336 3.12e-17 82.8
MS.gene019506.t1 MTR_7g060960 29.126 309 157 15 10 297 32 299 3.16e-17 82.4
MS.gene019506.t1 MTR_7g056760 27.619 315 192 11 10 294 23 331 3.21e-17 82.8
MS.gene019506.t1 MTR_3g007300 29.677 310 157 15 10 305 49 311 3.21e-17 82.4
MS.gene019506.t1 MTR_7g066100 27.089 395 229 18 10 355 11 395 4.68e-17 82.0
MS.gene019506.t1 MTR_4g030110 26.364 330 179 11 1 297 21 319 4.78e-17 82.0
MS.gene019506.t1 MTR_7g013590 30.392 306 163 14 13 292 39 320 4.79e-17 82.0
MS.gene019506.t1 MTR_3g009250 33.023 215 128 8 10 219 41 244 6.18e-17 79.7
MS.gene019506.t1 MTR_7g066030 28.399 331 184 14 7 297 18 335 6.22e-17 82.0
MS.gene019506.t1 MTR_1g058190 27.961 304 168 13 6 292 31 300 6.29e-17 81.6
MS.gene019506.t1 MTR_7g066010 26.689 296 182 10 7 272 18 308 8.54e-17 81.3
MS.gene019506.t1 MTR_3g006500 25.316 316 181 12 10 299 17 303 8.89e-17 81.3
MS.gene019506.t1 MTR_4g030760 25.466 322 193 12 10 308 73 370 9.86e-17 81.3
MS.gene019506.t1 MTR_7g055930 28.783 337 185 14 13 299 16 347 1.04e-16 81.3
MS.gene019506.t1 MTR_1g055375 28.947 304 174 14 13 292 7 292 1.12e-16 80.9
MS.gene019506.t1 MTR_7g035295 26.852 324 166 13 10 299 16 302 1.21e-16 80.9
MS.gene019506.t1 MTR_5g069930 25.641 312 197 13 10 297 6 306 1.26e-16 80.9
MS.gene019506.t1 MTR_7g009265 28.452 239 149 7 81 299 10 246 1.35e-16 80.1
MS.gene019506.t1 MTR_1g055055 24.324 296 179 10 10 292 26 289 1.46e-16 80.1
MS.gene019506.t1 MTR_2g047832 27.848 316 187 15 10 296 29 332 2.05e-16 80.5
MS.gene019506.t1 MTR_2g461450 28.188 298 185 9 10 297 18 296 2.09e-16 80.1
MS.gene019506.t1 MTR_5g037680 25.450 389 232 17 9 353 7 381 2.31e-16 80.5
MS.gene019506.t1 MTR_7g056820 25.888 394 229 16 10 360 7 380 2.34e-16 80.1
MS.gene019506.t1 MTR_1g088120 29.630 324 179 15 13 297 13 326 2.90e-16 80.1
MS.gene019506.t1 MTR_3g011650 31.250 224 136 8 4 219 70 283 3.05e-16 78.6
MS.gene019506.t1 MTR_7g066850 28.165 316 186 13 10 298 23 324 3.05e-16 80.1
MS.gene019506.t1 MTR_0128s0010 27.469 324 183 13 3 292 14 319 4.48e-16 79.3
MS.gene019506.t1 MTR_7g057270 27.640 322 191 10 10 297 26 339 5.56e-16 79.0
MS.gene019506.t1 MTR_5g048160 24.695 328 206 12 9 299 3 326 9.34e-16 78.2
MS.gene019506.t1 MTR_7g060940 27.576 330 170 14 10 297 22 324 1.14e-15 78.2
MS.gene019506.t1 MTR_7g077990 26.524 328 174 13 10 297 17 317 1.19e-15 78.2
MS.gene019506.t1 MTR_7g061060 27.586 319 184 13 10 297 13 315 1.27e-15 77.8
MS.gene019506.t1 MTR_1g061330 26.287 369 232 14 10 354 4 356 1.80e-15 77.4
MS.gene019506.t1 MTR_2g046830 27.852 298 184 13 13 296 28 308 1.84e-15 77.4
MS.gene019506.t1 MTR_5g097680 23.981 417 233 15 13 356 20 425 1.88e-15 77.4
MS.gene019506.t1 MTR_3g437520 26.970 330 188 14 13 297 26 347 1.94e-15 77.8
MS.gene019506.t1 MTR_6g017295 26.050 238 151 7 81 297 20 253 1.95e-15 77.8
MS.gene019506.t1 MTR_2g437110 26.911 327 177 13 10 297 22 325 1.98e-15 77.8
MS.gene019506.t1 MTR_2g021950 25.193 389 230 16 13 354 19 393 1.99e-15 77.4
MS.gene019506.t1 MTR_1g007450 27.134 328 196 12 10 299 12 334 3.38e-15 76.6
MS.gene019506.t1 MTR_7g056200 27.358 318 169 12 10 297 23 308 3.68e-15 76.3
MS.gene019506.t1 MTR_7g055977 28.840 319 189 15 4 297 1 306 3.69e-15 76.3
MS.gene019506.t1 MTR_3g058480 30.418 263 139 13 9 245 38 282 3.77e-15 75.9
MS.gene019506.t1 MTR_1g037540 26.506 332 186 15 10 292 5 327 4.07e-15 76.3
MS.gene019506.t1 MTR_7g066840 26.730 318 190 11 10 297 23 327 4.22e-15 76.3
MS.gene019506.t1 MTR_6g016285 26.708 322 185 11 10 292 21 330 5.70e-15 76.3
MS.gene019506.t1 MTR_2g047892 26.168 321 178 12 10 292 22 321 5.85e-15 75.9
MS.gene019506.t1 MTR_4g014370 23.645 406 244 15 9 356 10 407 7.15e-15 75.9
MS.gene019506.t1 MTR_0649s0020 28.660 321 182 14 10 297 11 317 7.32e-15 75.5
MS.gene019506.t1 MTR_4g006270 27.184 309 155 14 9 290 3 268 8.22e-15 75.5
MS.gene019506.t1 MTR_5g008530 61.818 55 20 1 2 56 10 63 8.39e-15 69.3
MS.gene019506.t1 MTR_7g066000 27.187 320 196 15 7 297 22 333 8.94e-15 75.5
MS.gene019506.t1 MTR_5g097820 29.213 267 142 13 2 233 15 269 1.02e-14 73.9
MS.gene019506.t1 MTR_2g078870 31.214 173 101 6 120 292 78 232 1.34e-14 73.9
MS.gene019506.t1 MTR_2g104280 25.570 395 243 16 9 356 13 403 1.99e-14 74.3
MS.gene019506.t1 MTR_4g070550 22.922 397 248 17 10 362 5 387 2.23e-14 74.3
MS.gene019506.t1 MTR_6g055210 26.959 319 185 15 10 291 22 329 2.95e-14 73.9
MS.gene019506.t1 MTR_7g056170 28.161 348 156 14 10 297 75 388 2.98e-14 73.9
MS.gene019506.t1 MTR_3g023940 25.397 378 220 15 10 353 34 383 3.16e-14 73.6
MS.gene019506.t1 MTR_4g055820 25.485 361 212 14 1 313 5 356 3.84e-14 73.2
MS.gene019506.t1 MTR_2g043400 28.182 330 169 16 13 297 26 332 3.97e-14 73.6
MS.gene019506.t1 MTR_1g023400 25.474 369 237 16 8 354 1 353 4.29e-14 73.2
MS.gene019506.t1 MTR_4g011660 24.332 337 184 11 10 292 19 338 4.51e-14 73.6
MS.gene019506.t1 MTR_7g017170 25.000 336 194 13 9 301 17 337 4.69e-14 73.2
MS.gene019506.t1 MTR_6g086825 24.877 406 237 16 6 356 66 458 4.96e-14 73.6
MS.gene019506.t1 MTR_3g010870 29.412 221 123 9 10 216 37 238 5.38e-14 72.4
MS.gene019506.t1 MTR_7g017130 25.000 336 194 13 9 301 17 337 5.42e-14 73.2
MS.gene019506.t1 MTR_6g013270 25.625 320 181 14 10 299 29 321 5.87e-14 72.8
MS.gene019506.t1 MTR_7g056260 27.358 318 180 12 13 297 17 316 6.26e-14 72.0
MS.gene019506.t1 MTR_5g057643 30.275 218 126 11 10 213 46 251 6.27e-14 71.6
MS.gene019506.t1 MTR_7g061090 24.923 325 197 11 10 297 22 336 9.30e-14 72.4
MS.gene019506.t1 MTR_2g022000 24.060 399 240 14 9 350 15 407 9.44e-14 72.4
MS.gene019506.t1 MTR_1g112930 27.575 301 173 14 10 291 25 299 1.23e-13 72.0
MS.gene019506.t1 MTR_3g096250 27.647 340 165 15 9 319 46 333 1.35e-13 71.6
MS.gene019506.t1 MTR_7g078840 27.666 347 180 16 10 297 10 344 1.40e-13 72.0
MS.gene019506.t1 MTR_7g077070 27.679 336 186 17 10 297 16 342 1.43e-13 72.0
MS.gene019506.t1 MTR_1g115185 27.019 322 189 16 10 307 39 338 1.43e-13 71.6
MS.gene019506.t1 MTR_4g028510 25.377 398 241 15 6 356 12 400 1.56e-13 72.0
MS.gene019506.t1 MTR_3g011120 25.749 334 204 13 10 313 14 333 2.09e-13 71.2
MS.gene019506.t1 MTR_8g039500 24.038 312 195 12 9 292 11 308 2.30e-13 70.9
MS.gene019506.t1 MTR_5g022090 27.632 304 166 15 9 292 33 302 2.52e-13 70.9
MS.gene019506.t1 MTR_3g058470 27.362 307 157 11 9 292 36 299 2.83e-13 70.9
MS.gene019506.t1 MTR_3g030320 26.455 189 127 5 105 292 46 223 3.13e-13 70.1
MS.gene019506.t1 MTR_3g096280 28.094 299 154 15 22 299 17 275 3.28e-13 70.5
MS.gene019506.t1 MTR_5g097330 25.000 388 238 12 13 354 19 399 3.52e-13 70.5
MS.gene019506.t1 MTR_4g080200 26.336 262 153 12 10 255 3 240 3.67e-13 70.1
MS.gene019506.t1 MTR_2g010950 26.380 326 205 12 2 297 10 330 3.89e-13 70.5
MS.gene019506.t1 MTR_7g061050 26.415 318 186 13 10 297 13 312 4.34e-13 70.1
MS.gene019506.t1 MTR_2g031700 27.197 239 141 10 10 234 6 225 4.56e-13 69.3
MS.gene019506.t1 MTR_5g068040 27.974 311 179 13 10 297 16 304 5.64e-13 69.7
MS.gene019506.t1 MTR_4g033495 25.705 319 194 11 10 297 27 333 6.65e-13 70.1
MS.gene019506.t1 MTR_7g056797 26.603 312 189 15 10 290 23 325 7.58e-13 69.7
MS.gene019506.t1 MTR_2g047878 23.936 376 235 13 3 353 14 363 1.09e-12 68.9
MS.gene019506.t1 MTR_8g467670 23.481 362 220 10 3 324 8 352 1.19e-12 68.9
MS.gene019506.t1 MTR_3g058440 30.612 245 136 10 10 234 35 265 1.96e-12 67.8
MS.gene019506.t1 MTR_4g013175 27.566 341 176 13 13 297 13 338 2.00e-12 68.6
MS.gene019506.t1 MTR_0054s0090 24.242 396 227 16 18 356 25 404 2.45e-12 68.2
MS.gene019506.t1 MTR_7g052670 26.286 350 183 16 10 297 21 357 2.79e-12 68.2
MS.gene019506.t1 MTR_5g097220 24.490 392 215 16 9 343 12 379 2.83e-12 67.8
MS.gene019506.t1 MTR_7g056737 27.331 311 188 13 10 297 22 317 3.08e-12 67.8
MS.gene019506.t1 MTR_5g096900 26.531 294 163 12 10 266 12 289 5.34e-12 66.6
MS.gene019506.t1 MTR_5g023570 38.835 103 60 2 10 112 37 136 6.06e-12 63.2
MS.gene019506.t1 MTR_5g057040 32.353 170 92 5 10 165 46 206 7.64e-12 67.4
MS.gene019506.t1 MTR_1g055200 45.455 77 35 3 103 178 5 75 8.59e-12 61.6
MS.gene019506.t1 MTR_5g097350 25.067 375 226 15 19 354 25 383 1.08e-11 65.9
MS.gene019506.t1 MTR_7g111700 25.208 361 234 12 13 354 18 361 1.53e-11 65.5
MS.gene019506.t1 MTR_5g043160 25.507 345 178 15 13 296 53 379 2.47e-11 65.1
MS.gene019506.t1 MTR_1g071010 25.723 311 200 14 11 297 16 319 2.84e-11 64.7
MS.gene019506.t1 MTR_2g066200 24.118 340 214 14 9 313 11 341 2.95e-11 64.7
MS.gene019506.t1 MTR_2g021210 26.712 292 188 10 9 292 83 356 4.14e-11 64.3
MS.gene019506.t1 MTR_7g016930 24.214 318 179 11 10 293 16 305 4.32e-11 63.9
MS.gene019506.t1 MTR_7g050520 28.448 232 125 10 6 218 18 227 4.89e-11 63.9
MS.gene019506.t1 MTR_7g022600 24.011 354 194 13 3 297 10 347 5.92e-11 63.9
MS.gene019506.t1 MTR_7g079160 27.945 365 181 18 13 308 11 362 6.53e-11 63.9
MS.gene019506.t1 MTR_1g114700 25.460 326 173 13 10 299 29 320 6.88e-11 63.5
MS.gene019506.t1 MTR_3g010440 25.751 233 157 7 1 223 17 243 9.84e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene019506.t1 AT3G23880 30.351 313 187 12 3 299 7 304 3.63e-27 110
MS.gene019506.t1 AT3G06240 28.701 331 176 14 10 292 36 354 1.29e-24 104
MS.gene019506.t1 AT3G16210 29.355 310 161 13 10 300 5 275 2.17e-20 91.7
MS.gene019506.t1 AT4G12560 28.435 313 187 14 10 297 4 304 6.74e-19 87.8
MS.gene019506.t1 AT4G12560 28.435 313 187 14 10 297 4 304 6.74e-19 87.8
MS.gene019506.t1 AT4G12560 28.435 313 187 14 10 297 4 304 6.74e-19 87.8
MS.gene019506.t1 AT3G16590 26.710 307 192 11 10 297 5 297 6.04e-14 72.8
MS.gene019506.t1 AT3G08750 28.070 285 162 15 9 280 11 265 1.04e-13 72.0
MS.gene019506.t1 AT3G17710 25.817 306 200 13 6 298 2 293 2.27e-13 70.9
MS.gene019506.t1 AT3G10430 26.829 287 176 12 9 283 4 268 8.06e-13 69.3
MS.gene019506.t1 AT4G22390 23.684 304 197 16 11 292 5 295 8.76e-13 69.3
MS.gene019506.t1 AT4G22390 23.684 304 197 16 11 292 5 295 8.95e-13 69.3
MS.gene019506.t1 AT4G19940 24.022 358 210 13 9 326 34 369 1.96e-12 68.6
MS.gene019506.t1 AT1G50870 24.609 256 166 9 2 245 23 263 5.07e-12 67.0
MS.gene019506.t1 AT1G13200 23.399 406 236 15 9 353 42 433 6.46e-12 67.0
MS.gene019506.t1 AT1G47790 24.662 296 195 12 2 287 17 294 7.58e-12 66.6
MS.gene019506.t1 AT5G49610 26.599 297 176 14 11 288 10 283 1.16e-11 65.9
MS.gene019506.t1 AT5G62510 22.849 337 210 10 9 314 43 360 1.21e-11 65.9
MS.gene019506.t1 AT1G33530 25.000 304 177 15 9 293 96 367 2.42e-11 65.1
MS.gene019506.t1 AT5G62660 26.708 322 173 17 9 296 40 332 2.42e-11 65.1
MS.gene019506.t1 AT1G32420 24.333 300 171 12 5 283 32 296 3.21e-11 63.9
MS.gene019506.t1 AT5G50220 23.856 306 166 14 2 292 25 278 3.52e-11 64.3
MS.gene019506.t1 AT1G11620 27.070 314 182 16 6 296 2 291 7.41e-11 63.5
MS.gene019506.t1 AT2G40910 23.166 259 156 8 7 242 59 297 7.48e-11 63.5
MS.gene019506.t1 AT2G40910 23.166 259 156 8 7 242 66 304 9.33e-11 63.5

Find 76 sgRNAs with CRISPR-Local

Find 86 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTGCCTTTGATTTAA+TGG 0.094561 8.1:-69777426 MS.gene019506:CDS
TATTATGATTTGTGGGTATT+TGG 0.157959 8.1:-69777350 MS.gene019506:CDS
TATTCTTCTTATGAAATTAA+AGG 0.159525 8.1:-69777821 MS.gene019506:CDS
ATAATTGGACAATTGAAATA+TGG 0.213992 8.1:-69777295 MS.gene019506:CDS
TTGGAAAATTTCTCAGTCTA+TGG 0.237424 8.1:-69777331 MS.gene019506:CDS
AAACGCAAAAGATACTTTAC+TGG 0.270840 8.1:+69778043 None:intergenic
CGACGTCAACCATATGGTTT+TGG 0.296265 8.1:-69777677 MS.gene019506:CDS
TGAAACAGAATCATGGTTAA+TGG 0.320662 8.1:+69777874 None:intergenic
TAATCCTGCTTTGGAAGCTT+TGG 0.330098 8.1:+69777508 None:intergenic
TTGCCGCGGAAACATCAATA+TGG 0.331956 8.1:+69777960 None:intergenic
GGTATTCAAATAAGTGAATT+GGG 0.335829 8.1:+69777541 None:intergenic
TGGTATTCAAATAAGTGAAT+TGG 0.351160 8.1:+69777540 None:intergenic
TCTTCAATGGGGCTATTCAT+TGG 0.385937 8.1:-69777484 MS.gene019506:CDS
GAATCTGAATGCTTCTGAAT+TGG 0.391506 8.1:-69777099 MS.gene019506:CDS
ATTGAAGAATAATCCTGCTT+TGG 0.397965 8.1:+69777499 None:intergenic
AAAGCAGGATTATTCTTCAA+TGG 0.398001 8.1:-69777497 MS.gene019506:CDS
TAATTGGACAATTGAAATAT+GGG 0.403350 8.1:-69777294 MS.gene019506:CDS
TAACCATGATTCTGTTTCAC+TGG 0.404123 8.1:-69777870 MS.gene019506:CDS
TTGGTGAAGTTTAATGATAA+AGG 0.404506 8.1:-69777146 MS.gene019506:CDS
CAATGGGGCTATTCATTGGT+TGG 0.407106 8.1:-69777480 MS.gene019506:CDS
AAGCAGGATTATTCTTCAAT+GGG 0.407987 8.1:-69777496 MS.gene019506:CDS
GTCCGAAAAGTAGAAAAGTA+TGG 0.421923 8.1:+69777846 None:intergenic
GTTAAACTTGCACACGGTCC+AGG 0.424041 8.1:+69777047 None:intergenic
ATCTCGGGTATTATGATTTG+TGG 0.429129 8.1:-69777358 MS.gene019506:CDS
TCGATGATATGCAAGTGATT+TGG 0.443824 8.1:+69777697 None:intergenic
TCTCATTGAGAGATAATAAG+TGG 0.452326 8.1:-69777580 MS.gene019506:CDS
CCAAGTAATCATCTCTTGAT+TGG 0.454916 8.1:+69777648 None:intergenic
TCTTTGTGAAATCTAGAAGA+TGG 0.459093 8.1:+69777743 None:intergenic
AGATTGTGGTCAAAATCAAC+TGG 0.461270 8.1:+69777377 None:intergenic
GAGTCTCCGCTTTCACTCCC+TGG 0.464258 8.1:-69777065 MS.gene019506:CDS
AATTGAAATATGGGTGATGA+AGG 0.467515 8.1:-69777285 MS.gene019506:CDS
TTTCCTTTCCATTAAATCAA+AGG 0.478785 8.1:+69777418 None:intergenic
TATGCCAAAGCTTCCAAAGC+AGG 0.478827 8.1:-69777512 MS.gene019506:CDS
TCAAATGCGTTTGTAAGTCA+TGG 0.482109 8.1:-69778021 MS.gene019506:CDS
TCTATAGAGCGAATTCCAAC+AGG 0.487859 8.1:+69777908 None:intergenic
TATCATCGACGTCAACCATA+TGG 0.496619 8.1:-69777683 MS.gene019506:CDS
CCAATCAAGAGATGATTACT+TGG 0.499996 8.1:-69777648 MS.gene019506:CDS
AATACAAACAACATTCGTCT+TGG 0.503398 8.1:-69777262 MS.gene019506:CDS
GAGCGAATTCCAACAGGAGA+TGG 0.505374 8.1:+69777914 None:intergenic
GGAAGCTTTGGCATAATCCA+TGG 0.505733 8.1:+69777520 None:intergenic
AGCGAGAACTTCATCACGGT+TGG 0.511457 8.1:-69777609 MS.gene019506:CDS
TGGTCATAACCAAAACCATA+TGG 0.514260 8.1:+69777668 None:intergenic
AACTGATGGTTGGAGTGGAT+TGG 0.514369 8.1:-69777165 MS.gene019506:CDS
TCTCGGGTATTATGATTTGT+GGG 0.515307 8.1:-69777357 MS.gene019506:CDS
TCAAGAACTCCATCTCCTGT+TGG 0.516376 8.1:-69777923 MS.gene019506:CDS
TGCCGCGGAAACATCAATAT+GGG 0.518527 8.1:+69777961 None:intergenic
AAATTAAAGGTTCATGCAGA+GGG 0.521334 8.1:-69777808 MS.gene019506:CDS
TGGTCAAAATCAACTGGAAG+AGG 0.526874 8.1:+69777383 None:intergenic
ATCAAGAGATGATTACTTGG+TGG 0.531322 8.1:-69777645 MS.gene019506:CDS
TTGCCTTTGATTTAATGGAA+AGG 0.533360 8.1:-69777421 MS.gene019506:CDS
GTTCAACAAACCTCTGCGTA+TGG 0.541703 8.1:-69777769 MS.gene019506:CDS
ATTCACTTATTTGAATACCA+TGG 0.544429 8.1:-69777537 MS.gene019506:CDS
ATATAAGGGAAGAGCACAGA+AGG 0.545080 8.1:+69777216 None:intergenic
GGTGATATTGTTGGAACTGA+TGG 0.549980 8.1:-69777179 MS.gene019506:CDS
ACTTTACTGGAAACCTCAGC+AGG 0.551254 8.1:+69778056 None:intergenic
TTAAACTTGCACACGGTCCA+GGG 0.552307 8.1:+69777048 None:intergenic
TACTCATTCAAATCCTGCTG+AGG 0.558793 8.1:-69778069 MS.gene019506:CDS
CACGGTCCAGGGAGTGAAAG+CGG 0.561772 8.1:+69777059 None:intergenic
GAAATTAAAGGTTCATGCAG+AGG 0.568478 8.1:-69777809 MS.gene019506:CDS
GTTGGAACTGATGGTTGGAG+TGG 0.575710 8.1:-69777170 MS.gene019506:CDS
ATATTGTTGGAACTGATGGT+TGG 0.578132 8.1:-69777175 MS.gene019506:CDS
AATCATAATACCCGAGATTG+TGG 0.582608 8.1:+69777363 None:intergenic
GGTCCAGTGAAACAGAATCA+TGG 0.595041 8.1:+69777867 None:intergenic
CCGTGATGAAGTTCTCGCTA+AGG 0.599812 8.1:+69777613 None:intergenic
TATTAACACAATTCTTGCCG+CGG 0.620540 8.1:+69777946 None:intergenic
ATTTGAATGAGTAATTCCGC+AGG 0.621486 8.1:+69778079 None:intergenic
TTCCCATATTGATGTTTCCG+CGG 0.625415 8.1:-69777963 MS.gene019506:CDS
ATATGGGAATTCGCAAAGTG+AGG 0.629347 8.1:+69777977 None:intergenic
CATCTTGTTAAACTTGCACA+CGG 0.639243 8.1:+69777041 None:intergenic
CCTTAGCGAGAACTTCATCA+CGG 0.641225 8.1:-69777613 MS.gene019506:CDS
GTATTCAAATAAGTGAATTG+GGG 0.643134 8.1:+69777542 None:intergenic
AAGCGGAGACTCTGTATACA+CGG 0.652046 8.1:+69777076 None:intergenic
AGCAGGATTATTCTTCAATG+GGG 0.673360 8.1:-69777495 MS.gene019506:CDS
TTGGCAGCAAAAGAAGACAA+AGG 0.678501 8.1:+69777716 None:intergenic
TGCGACGTTCAATCTTCCTG+CGG 0.680389 8.1:-69778095 MS.gene019506:CDS
AAGATGGATTCCATACGCAG+AGG 0.688276 8.1:+69777759 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTCTTCTTATGAAATTAA+AGG - chr8.1:69777328-69777347 MS.gene019506:CDS 15.0%
!! ATAATTGGACAATTGAAATA+TGG - chr8.1:69777854-69777873 MS.gene019506:CDS 20.0%
!! TAATTGGACAATTGAAATAT+GGG - chr8.1:69777855-69777874 MS.gene019506:CDS 20.0%
!!! GGAAAAGAAATTTTCATAAT+TGG - chr8.1:69777839-69777858 MS.gene019506:CDS 20.0%
! ATTCACTTATTTGAATACCA+TGG - chr8.1:69777612-69777631 MS.gene019506:CDS 25.0%
! GGTATTCAAATAAGTGAATT+GGG + chr8.1:69777611-69777630 None:intergenic 25.0%
! GTATTCAAATAAGTGAATTG+GGG + chr8.1:69777610-69777629 None:intergenic 25.0%
! TGGTATTCAAATAAGTGAAT+TGG + chr8.1:69777612-69777631 None:intergenic 25.0%
! TTGGTGAAGTTTAATGATAA+AGG - chr8.1:69778003-69778022 MS.gene019506:CDS 25.0%
! TTTCCTTTCCATTAAATCAA+AGG + chr8.1:69777734-69777753 None:intergenic 25.0%
!! ACTTTTTGTGGAGTATATAA+GGG + chr8.1:69777950-69777969 None:intergenic 25.0%
!! TATTATGATTTGTGGGTATT+TGG - chr8.1:69777799-69777818 MS.gene019506:CDS 25.0%
!! TATTGTTGCCTTTGATTTAA+TGG - chr8.1:69777723-69777742 MS.gene019506:CDS 25.0%
AAACGCAAAAGATACTTTAC+TGG + chr8.1:69777109-69777128 None:intergenic 30.0%
AAAGCAGGATTATTCTTCAA+TGG - chr8.1:69777652-69777671 MS.gene019506:CDS 30.0%
AAATTAAAGGTTCATGCAGA+GGG - chr8.1:69777341-69777360 MS.gene019506:CDS 30.0%
AAGCAGGATTATTCTTCAAT+GGG - chr8.1:69777653-69777672 MS.gene019506:CDS 30.0%
AATACAAACAACATTCGTCT+TGG - chr8.1:69777887-69777906 MS.gene019506:CDS 30.0%
AATTGAAATATGGGTGATGA+AGG - chr8.1:69777864-69777883 MS.gene019506:CDS 30.0%
ACAAAAAGTGGTGATATTGT+TGG - chr8.1:69777961-69777980 MS.gene019506:CDS 30.0%
ATTGAAGAATAATCCTGCTT+TGG + chr8.1:69777653-69777672 None:intergenic 30.0%
CTTATATACTCCACAAAAAG+TGG - chr8.1:69777949-69777968 MS.gene019506:CDS 30.0%
TCTCATTGAGAGATAATAAG+TGG - chr8.1:69777569-69777588 MS.gene019506:CDS 30.0%
TCTTTGTGAAATCTAGAAGA+TGG + chr8.1:69777409-69777428 None:intergenic 30.0%
TGAAACAGAATCATGGTTAA+TGG + chr8.1:69777278-69777297 None:intergenic 30.0%
TTGGAAAATTTCTCAGTCTA+TGG - chr8.1:69777818-69777837 MS.gene019506:CDS 30.0%
! ATGCAGAGGGTTTATATTTT+TGG - chr8.1:69777354-69777373 MS.gene019506:CDS 30.0%
! TTGCCTTTGATTTAATGGAA+AGG - chr8.1:69777728-69777747 MS.gene019506:CDS 30.0%
!! CACTTTTTGTGGAGTATATA+AGG + chr8.1:69777951-69777970 None:intergenic 30.0%
!! GACCATACTTTTCTACTTTT+CGG - chr8.1:69777301-69777320 MS.gene019506:CDS 30.0%
!!! AACAATATCACCACTTTTTG+TGG + chr8.1:69777962-69777981 None:intergenic 30.0%
AATCATAATACCCGAGATTG+TGG + chr8.1:69777789-69777808 None:intergenic 35.0%
AGATTGTGGTCAAAATCAAC+TGG + chr8.1:69777775-69777794 None:intergenic 35.0%
AGCAGGATTATTCTTCAATG+GGG - chr8.1:69777654-69777673 MS.gene019506:CDS 35.0%
ATATTGTTGGAACTGATGGT+TGG - chr8.1:69777974-69777993 MS.gene019506:CDS 35.0%
ATCAAGAGATGATTACTTGG+TGG - chr8.1:69777504-69777523 MS.gene019506:CDS 35.0%
ATCTCGGGTATTATGATTTG+TGG - chr8.1:69777791-69777810 MS.gene019506:CDS 35.0%
ATTTGAATGAGTAATTCCGC+AGG + chr8.1:69777073-69777092 None:intergenic 35.0%
CATCTTGTTAAACTTGCACA+CGG + chr8.1:69778111-69778130 None:intergenic 35.0%
CCAAGTAATCATCTCTTGAT+TGG + chr8.1:69777504-69777523 None:intergenic 35.0%
CCAATCAAGAGATGATTACT+TGG - chr8.1:69777501-69777520 MS.gene019506:CDS 35.0%
GAAATTAAAGGTTCATGCAG+AGG - chr8.1:69777340-69777359 MS.gene019506:CDS 35.0%
GAATCTGAATGCTTCTGAAT+TGG - chr8.1:69778050-69778069 MS.gene019506:CDS 35.0%
GTCCGAAAAGTAGAAAAGTA+TGG + chr8.1:69777306-69777325 None:intergenic 35.0%
TAACCATGATTCTGTTTCAC+TGG - chr8.1:69777279-69777298 MS.gene019506:CDS 35.0%
TATTAACACAATTCTTGCCG+CGG + chr8.1:69777206-69777225 None:intergenic 35.0%
TCAAATGCGTTTGTAAGTCA+TGG - chr8.1:69777128-69777147 MS.gene019506:CDS 35.0%
TCGATGATATGCAAGTGATT+TGG + chr8.1:69777455-69777474 None:intergenic 35.0%
TGGTCATAACCAAAACCATA+TGG + chr8.1:69777484-69777503 None:intergenic 35.0%
! TCTCGGGTATTATGATTTGT+GGG - chr8.1:69777792-69777811 MS.gene019506:CDS 35.0%
!! GTTGATTTTGACCACAATCT+CGG - chr8.1:69777775-69777794 MS.gene019506:CDS 35.0%
!! TTGATTTTGACCACAATCTC+GGG - chr8.1:69777776-69777795 MS.gene019506:CDS 35.0%
ATATGGGAATTCGCAAAGTG+AGG + chr8.1:69777175-69777194 None:intergenic 40.0%
GGTGATATTGTTGGAACTGA+TGG - chr8.1:69777970-69777989 MS.gene019506:CDS 40.0%
TACTCATTCAAATCCTGCTG+AGG - chr8.1:69777080-69777099 MS.gene019506:CDS 40.0%
TATCATCGACGTCAACCATA+TGG - chr8.1:69777466-69777485 MS.gene019506:CDS 40.0%
TCTATAGAGCGAATTCCAAC+AGG + chr8.1:69777244-69777263 None:intergenic 40.0%
TCTTCAATGGGGCTATTCAT+TGG - chr8.1:69777665-69777684 MS.gene019506:CDS 40.0%
TGGTCAAAATCAACTGGAAG+AGG + chr8.1:69777769-69777788 None:intergenic 40.0%
TTCCCATATTGATGTTTCCG+CGG - chr8.1:69777186-69777205 MS.gene019506:CDS 40.0%
TTGGCAGCAAAAGAAGACAA+AGG + chr8.1:69777436-69777455 None:intergenic 40.0%
! ATATAAGGGAAGAGCACAGA+AGG + chr8.1:69777936-69777955 None:intergenic 40.0%
!! TAATCCTGCTTTGGAAGCTT+TGG + chr8.1:69777644-69777663 None:intergenic 40.0%
AACTGATGGTTGGAGTGGAT+TGG - chr8.1:69777984-69778003 MS.gene019506:CDS 45.0%
AAGCGGAGACTCTGTATACA+CGG + chr8.1:69778076-69778095 None:intergenic 45.0%
ACTTTACTGGAAACCTCAGC+AGG + chr8.1:69777096-69777115 None:intergenic 45.0%
CAATGGGGCTATTCATTGGT+TGG - chr8.1:69777669-69777688 MS.gene019506:CDS 45.0%
CCTTAGCGAGAACTTCATCA+CGG - chr8.1:69777536-69777555 MS.gene019506:CDS 45.0%
GGTCCAGTGAAACAGAATCA+TGG + chr8.1:69777285-69777304 None:intergenic 45.0%
GTTCAACAAACCTCTGCGTA+TGG - chr8.1:69777380-69777399 MS.gene019506:CDS 45.0%
TATGCCAAAGCTTCCAAAGC+AGG - chr8.1:69777637-69777656 MS.gene019506:CDS 45.0%
TCAAGAACTCCATCTCCTGT+TGG - chr8.1:69777226-69777245 MS.gene019506:CDS 45.0%
TGCCGCGGAAACATCAATAT+GGG + chr8.1:69777191-69777210 None:intergenic 45.0%
TTAAACTTGCACACGGTCCA+GGG + chr8.1:69778104-69778123 None:intergenic 45.0%
TTGCCGCGGAAACATCAATA+TGG + chr8.1:69777192-69777211 None:intergenic 45.0%
! AAGATGGATTCCATACGCAG+AGG + chr8.1:69777393-69777412 None:intergenic 45.0%
! CGACGTCAACCATATGGTTT+TGG - chr8.1:69777472-69777491 MS.gene019506:CDS 45.0%
! GGAAGCTTTGGCATAATCCA+TGG + chr8.1:69777632-69777651 None:intergenic 45.0%
AGCGAGAACTTCATCACGGT+TGG - chr8.1:69777540-69777559 MS.gene019506:CDS 50.0%
CCGTGATGAAGTTCTCGCTA+AGG + chr8.1:69777539-69777558 None:intergenic 50.0%
GAGCGAATTCCAACAGGAGA+TGG + chr8.1:69777238-69777257 None:intergenic 50.0%
GTTAAACTTGCACACGGTCC+AGG + chr8.1:69778105-69778124 None:intergenic 50.0%
GTTGGAACTGATGGTTGGAG+TGG - chr8.1:69777979-69777998 MS.gene019506:CDS 50.0%
TGCGACGTTCAATCTTCCTG+CGG - chr8.1:69777054-69777073 MS.gene019506:CDS 50.0%
CACGGTCCAGGGAGTGAAAG+CGG + chr8.1:69778093-69778112 None:intergenic 60.0%
GAGTCTCCGCTTTCACTCCC+TGG - chr8.1:69778084-69778103 MS.gene019506:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 69777040 69778131 69777040 ID=MS.gene019506
chr8.1 mRNA 69777040 69778131 69777040 ID=MS.gene019506.t1;Parent=MS.gene019506
chr8.1 exon 69777040 69778131 69777040 ID=MS.gene019506.t1.exon1;Parent=MS.gene019506.t1
chr8.1 CDS 69777040 69778131 69777040 ID=cds.MS.gene019506.t1;Parent=MS.gene019506.t1
Gene Sequence

>MS.gene019506

ATGGTGAAGATGAATGCGACGTTCAATCTTCCTGCGGAATTACTCATTCAAATCCTGCTGAGGTTTCCAGTAAAGTATCTTTTGCGTTTCAAATGCGTTTGTAAGTCATGGTTTTCTCTTATCTCTTTCGATCCTCACTTTGCGAATTCCCATATTGATGTTTCCGCGGCAAGAATTGTGTTAATATCAAGAACTCCATCTCCTGTTGGAATTCGCTCTATAGATTTTGAAACATCCATTAACCATGATTCTGTTTCACTGGACCATACTTTTCTACTTTTCGGACGTTATTCTTCTTATGAAATTAAAGGTTCATGCAGAGGGTTTATATTTTTGGACTGTTCAACAAACCTCTGCGTATGGAATCCATCTTCTAGATTTCACAAAGAAATACCTTTGTCTTCTTTTGCTGCCAAATCACTTGCATATCATCGACGTCAACCATATGGTTTTGGTTATGACCAATCAAGAGATGATTACTTGGTGGTTTTATTGTCCTTAGCGAGAACTTCATCACGGTTGGAGTTTTTCTCATTGAGAGATAATAAGTGGAATGAAATTGAATGTCCCCAATTCACTTATTTGAATACCATGGATTATGCCAAAGCTTCCAAAGCAGGATTATTCTTCAATGGGGCTATTCATTGGTTGGCTTCTCATTATCATGATATGCGAGTGAAAGTTATTGTTGCCTTTGATTTAATGGAAAGGAAACTGTTACAGATACCTCTTCCAGTTGATTTTGACCACAATCTCGGGTATTATGATTTGTGGGTATTTGGAAAATTTCTCAGTCTATGGAAAAGAAATTTTCATAATTGGACAATTGAAATATGGGTGATGAAGGAATACAAACAACATTCGTCTTGGACTAAGTCTCTTGTAATTTCTAGCCTTCTGTGCTCTTCCCTTATATACTCCACAAAAAGTGGTGATATTGTTGGAACTGATGGTTGGAGTGGATTGGTGAAGTTTAATGATAAAGGACAGCAGATAGAGTATCTCGAAATGAATCTGAATGCTTCTGAATTGGCCGTGTATACAGAGTCTCCGCTTTCACTCCCTGGACCGTGTGCAAGTTTAACAAGATGA

Protein sequence

>MS.gene019506.t1

MVKMNATFNLPAELLIQILLRFPVKYLLRFKCVCKSWFSLISFDPHFANSHIDVSAARIVLISRTPSPVGIRSIDFETSINHDSVSLDHTFLLFGRYSSYEIKGSCRGFIFLDCSTNLCVWNPSSRFHKEIPLSSFAAKSLAYHRRQPYGFGYDQSRDDYLVVLLSLARTSSRLEFFSLRDNKWNEIECPQFTYLNTMDYAKASKAGLFFNGAIHWLASHYHDMRVKVIVAFDLMERKLLQIPLPVDFDHNLGYYDLWVFGKFLSLWKRNFHNWTIEIWVMKEYKQHSSWTKSLVISSLLCSSLIYSTKSGDIVGTDGWSGLVKFNDKGQQIEYLEMNLNASELAVYTESPLSLPGPCASLTR