AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44892


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44892.t1 MTR_5g070130 88.402 388 45 0 1 388 1 388 0.0 706
MS.gene44892.t1 MTR_5g070080 65.897 390 105 5 6 376 5 385 8.07e-172 484
MS.gene44892.t1 MTR_5g070088 62.148 391 121 4 6 376 2 385 5.90e-162 460
MS.gene44892.t1 MTR_3g103020 57.221 367 146 4 9 373 18 375 3.16e-129 376
MS.gene44892.t1 MTR_5g097210 55.645 372 144 10 5 371 3 358 6.75e-122 357
MS.gene44892.t1 MTR_4g023080 53.243 370 151 8 5 373 3 351 1.58e-119 351
MS.gene44892.t1 MTR_4g023090 50.508 394 163 9 1 376 6 385 1.82e-117 347
MS.gene44892.t1 MTR_3g034180 53.158 380 153 10 5 371 117 484 1.34e-114 343
MS.gene44892.t1 MTR_3g034160 53.368 386 152 11 5 376 3 374 1.67e-111 331
MS.gene44892.t1 MTR_4g021785 51.070 374 160 9 1 373 1 352 4.76e-109 324
MS.gene44892.t1 MTR_4g109270 50.532 376 165 9 4 373 1 361 1.06e-108 323
MS.gene44892.t1 MTR_3g034130 51.330 376 155 10 1 362 1 362 1.32e-108 323
MS.gene44892.t1 MTR_4g109280 54.865 370 145 12 4 369 1 352 6.60e-108 321
MS.gene44892.t1 MTR_1g055135 51.351 370 161 9 10 371 12 370 7.50e-108 322
MS.gene44892.t1 MTR_4g122850 51.676 358 153 11 23 371 13 359 1.06e-106 319
MS.gene44892.t1 MTR_8g433040 50.928 377 153 10 1 371 9 359 1.91e-106 318
MS.gene44892.t1 MTR_8g032380 50.928 377 153 10 1 371 9 359 1.91e-106 318
MS.gene44892.t1 MTR_4g023380 49.626 401 147 10 2 376 7 378 1.78e-105 316
MS.gene44892.t1 MTR_4g117750 52.561 371 149 9 9 370 1 353 1.42e-104 317
MS.gene44892.t1 MTR_4g117750 54.717 106 48 0 266 371 373 478 2.57e-26 110
MS.gene44892.t1 MTR_4g023130 48.780 369 128 7 5 373 3 310 7.83e-104 309
MS.gene44892.t1 MTR_4g094365 49.077 379 171 10 4 376 1 363 1.47e-101 305
MS.gene44892.t1 MTR_4g116330 51.330 376 161 11 5 373 17 377 8.67e-101 304
MS.gene44892.t1 MTR_8g032390 50.529 378 144 12 1 372 31 371 9.70e-100 301
MS.gene44892.t1 MTR_4g117720 48.691 382 139 10 4 376 44 377 1.49e-99 301
MS.gene44892.t1 MTR_4g117770 50.000 378 167 9 4 373 1 364 7.57e-99 298
MS.gene44892.t1 MTR_4g117810 50.000 378 167 9 4 373 1 364 7.57e-99 298
MS.gene44892.t1 MTR_6g060650 49.740 384 165 11 4 373 1 370 7.77e-99 298
MS.gene44892.t1 MTR_4g023070 47.632 380 167 8 11 373 3 367 9.40e-98 296
MS.gene44892.t1 MTR_4g117850 50.272 368 159 11 10 369 22 373 2.15e-96 292
MS.gene44892.t1 MTR_4g117780 49.046 367 170 7 11 373 11 364 2.32e-96 292
MS.gene44892.t1 MTR_4g023120 48.294 381 163 10 11 373 3 367 2.56e-95 290
MS.gene44892.t1 MTR_4g023440 49.202 376 134 12 2 373 7 329 1.55e-94 286
MS.gene44892.t1 MTR_4g023150 49.465 374 164 11 5 373 4 357 2.72e-94 286
MS.gene44892.t1 MTR_4g023190 48.663 374 166 11 5 373 4 356 4.10e-92 281
MS.gene44892.t1 MTR_4g118380 49.185 368 154 8 4 349 1 357 4.40e-90 276
MS.gene44892.t1 MTR_4g023200 48.128 374 169 11 5 373 4 357 2.60e-87 268
MS.gene44892.t1 MTR_8g433030 46.933 375 129 12 1 372 31 338 6.23e-86 265
MS.gene44892.t1 MTR_4g121580 46.032 378 159 11 1 369 1 342 5.00e-84 261
MS.gene44892.t1 MTR_4g116330 46.809 376 139 11 5 373 17 338 2.00e-83 258
MS.gene44892.t1 MTR_1g055195 49.667 300 119 8 84 374 200 476 1.80e-79 252
MS.gene44892.t1 MTR_8g013010 50.719 278 120 5 2 275 45 309 1.03e-77 243
MS.gene44892.t1 MTR_4g117870 46.230 305 119 6 67 371 3 262 9.65e-76 236
MS.gene44892.t1 MTR_1g055165 41.962 367 150 9 10 373 9 315 1.46e-74 234
MS.gene44892.t1 MTR_7g079370 44.126 349 167 11 40 372 16 352 4.33e-69 222
MS.gene44892.t1 MTR_7g079400 45.098 306 142 11 78 372 43 333 2.18e-64 209
MS.gene44892.t1 MTR_4g118370 48.606 251 98 8 123 371 34 255 2.18e-64 206
MS.gene44892.t1 MTR_8g102520 40.053 377 159 15 4 372 1 318 4.15e-63 205
MS.gene44892.t1 MTR_4g116320 53.846 221 87 7 154 370 43 252 9.05e-60 194
MS.gene44892.t1 MTR_2g048580 37.931 377 187 16 4 372 1 338 8.06e-59 194
MS.gene44892.t1 MTR_1g055250 44.262 244 115 10 149 387 49 276 1.73e-53 180
MS.gene44892.t1 MTR_4g116340 44.130 247 106 5 1 240 26 247 1.74e-52 175
MS.gene44892.t1 MTR_4g118400 39.498 319 145 11 63 370 13 294 2.34e-51 174
MS.gene44892.t1 MTR_1g055175 48.990 198 91 7 178 373 9 198 3.58e-50 167
MS.gene44892.t1 MTR_8g040935 47.393 211 99 6 165 371 1 203 5.13e-47 159
MS.gene44892.t1 MTR_6g463430 44.550 211 103 4 165 373 1 199 3.65e-46 157
MS.gene44892.t1 MTR_2g021150 29.630 378 225 13 10 368 13 368 9.84e-38 140
MS.gene44892.t1 MTR_4g117530 39.111 225 87 6 148 371 73 248 2.54e-37 135
MS.gene44892.t1 MTR_7g079420 39.643 280 109 12 109 372 905 1140 2.98e-37 144
MS.gene44892.t1 MTR_7g117720 44.076 211 82 9 5 204 4 189 9.61e-37 135
MS.gene44892.t1 MTR_7g117720 53.271 107 43 3 272 371 166 272 1.89e-22 96.3
MS.gene44892.t1 MTR_4g114700 38.113 265 102 7 110 367 9 218 1.74e-34 128
MS.gene44892.t1 MTR_4g117430 45.181 166 75 5 110 275 3 152 8.44e-34 123
MS.gene44892.t1 MTR_5g069120 44.809 183 78 8 21 186 1 177 6.53e-32 119
MS.gene44892.t1 MTR_5g023000 61.702 94 36 0 278 371 1 94 1.29e-31 115
MS.gene44892.t1 MTR_4g118360 54.839 124 49 4 250 370 1 120 3.41e-31 115
MS.gene44892.t1 MTR_4g108820 30.233 301 162 11 10 310 41 293 1.29e-29 117
MS.gene44892.t1 MTR_7g079450 47.857 140 63 5 235 372 2 133 4.94e-29 110
MS.gene44892.t1 MTR_2g021190 28.013 307 198 7 11 309 21 312 6.75e-29 116
MS.gene44892.t1 MTR_4g109290 41.667 180 67 5 4 178 1 147 3.46e-28 109
MS.gene44892.t1 MTR_1g097330 27.540 374 241 13 11 373 16 370 8.43e-28 113
MS.gene44892.t1 MTR_8g098830 42.604 169 87 6 178 345 35 194 3.74e-27 108
MS.gene44892.t1 MTR_5g022420 28.889 315 189 12 3 310 19 305 1.05e-25 107
MS.gene44892.t1 MTR_1g097490 27.989 368 229 12 11 368 49 390 3.46e-25 105
MS.gene44892.t1 MTR_1g094210 29.412 374 216 17 11 368 57 398 3.41e-24 103
MS.gene44892.t1 MTR_4g107820 27.027 370 238 14 11 368 36 385 3.62e-24 103
MS.gene44892.t1 MTR_4g107780 27.027 370 238 14 11 368 36 385 3.62e-24 103
MS.gene44892.t1 MTR_6g021880 29.076 368 221 15 23 368 32 381 3.99e-24 102
MS.gene44892.t1 MTR_4g107820 27.027 370 238 14 11 368 36 385 4.25e-24 103
MS.gene44892.t1 MTR_4g107780 27.297 370 237 15 11 368 36 385 4.46e-24 103
MS.gene44892.t1 MTR_2g021155 29.204 339 205 13 15 339 40 357 4.72e-24 104
MS.gene44892.t1 MTR_6g053260 29.846 325 182 15 11 315 337 635 6.46e-24 104
MS.gene44892.t1 MTR_5g057690 28.205 312 188 13 11 315 46 328 6.93e-24 102
MS.gene44892.t1 MTR_1g094210 29.477 363 207 17 11 357 57 386 7.66e-24 102
MS.gene44892.t1 MTR_3g009310 30.719 306 182 10 11 306 42 327 7.94e-24 102
MS.gene44892.t1 MTR_5g057790 28.660 321 185 11 11 315 46 338 8.95e-24 102
MS.gene44892.t1 MTR_1g050542 27.439 328 198 14 11 324 58 359 1.39e-23 101
MS.gene44892.t1 MTR_2g029990 27.687 307 197 11 12 309 52 342 2.17e-23 101
MS.gene44892.t1 MTR_4g023430 60.870 92 34 2 1 91 32 122 2.90e-23 97.1
MS.gene44892.t1 MTR_4g023430 55.696 79 32 1 298 373 141 219 2.89e-21 91.7
MS.gene44892.t1 MTR_2g426090 28.173 323 178 13 15 305 10 310 3.84e-23 100
MS.gene44892.t1 MTR_4g122860 35.938 192 85 4 183 370 157 314 4.21e-23 99.4
MS.gene44892.t1 MTR_4g122860 49.533 107 45 4 1 106 60 158 1.22e-14 74.7
MS.gene44892.t1 MTR_5g057020 28.387 310 185 13 11 315 46 323 5.42e-23 99.0
MS.gene44892.t1 MTR_2g055970 27.077 325 205 14 2 317 202 503 5.92e-23 100
MS.gene44892.t1 MTR_6g004660 30.841 321 178 12 11 307 16 316 7.72e-23 99.4
MS.gene44892.t1 MTR_2g031640 27.445 317 181 12 11 305 6 295 9.14e-23 99.0
MS.gene44892.t1 MTR_2g046830 28.344 314 178 14 15 310 29 313 1.16e-22 99.0
MS.gene44892.t1 MTR_5g057710 27.500 320 188 11 11 314 46 337 1.18e-22 99.0
MS.gene44892.t1 MTR_6g065980 28.479 309 179 12 2 301 7 282 2.79e-22 97.4
MS.gene44892.t1 MTR_2g021210 27.974 311 194 12 5 309 78 364 2.90e-22 98.2
MS.gene44892.t1 MTR_3g007270 28.527 319 184 13 11 306 47 344 3.49e-22 97.8
MS.gene44892.t1 MTR_8g467140 28.660 321 187 13 2 305 22 317 3.75e-22 96.7
MS.gene44892.t1 MTR_2g031720 26.150 413 243 16 7 387 2 384 3.98e-22 97.4
MS.gene44892.t1 MTR_3g036290 30.619 307 168 15 11 306 22 294 4.73e-22 96.7
MS.gene44892.t1 MTR_1g097560 28.205 351 201 16 11 344 36 352 5.31e-22 96.7
MS.gene44892.t1 MTR_2g104340 27.251 411 231 20 5 371 8 394 6.30e-22 96.7
MS.gene44892.t1 MTR_3g011100 28.571 329 189 15 11 318 235 538 6.64e-22 97.8
MS.gene44892.t1 MTR_3g036335 27.320 388 218 19 11 368 41 394 6.81e-22 96.7
MS.gene44892.t1 MTR_3g006670 29.545 352 192 15 11 340 49 366 6.94e-22 96.7
MS.gene44892.t1 MTR_3g007360 29.560 318 174 14 15 311 56 344 7.12e-22 96.7
MS.gene44892.t1 MTR_0760s0010 28.302 371 215 17 16 368 52 389 7.28e-22 96.7
MS.gene44892.t1 MTR_3g024110 28.664 307 181 14 11 307 101 379 1.29e-21 96.3
MS.gene44892.t1 MTR_1g054725 27.760 317 191 11 10 309 19 314 1.59e-21 95.5
MS.gene44892.t1 MTR_3g007410 29.595 321 170 14 15 311 56 344 1.76e-21 95.5
MS.gene44892.t1 MTR_2g078900 26.645 304 183 9 11 301 33 309 1.80e-21 95.1
MS.gene44892.t1 MTR_7g066100 26.014 419 237 15 1 370 1 395 1.84e-21 95.5
MS.gene44892.t1 MTR_0044s0300 27.653 311 172 12 11 301 38 315 2.39e-21 95.1
MS.gene44892.t1 MTR_3g006570 26.902 368 218 16 11 365 21 350 2.71e-21 94.7
MS.gene44892.t1 MTR_6g090180 26.341 410 245 16 3 369 39 434 2.71e-21 95.5
MS.gene44892.t1 MTR_2g028160 28.650 363 203 16 11 335 5 349 2.86e-21 95.1
MS.gene44892.t1 MTR_2g024100 27.381 336 183 13 14 314 10 319 3.47e-21 94.7
MS.gene44892.t1 MTR_2g024110 27.213 305 189 12 11 301 4 289 3.57e-21 94.4
MS.gene44892.t1 MTR_6g053240 28.571 329 186 14 11 315 28 331 4.29e-21 94.4
MS.gene44892.t1 MTR_7g017130 28.889 405 231 19 4 371 11 395 4.52e-21 94.4
MS.gene44892.t1 MTR_3g030250 29.206 315 162 14 11 305 37 310 5.10e-21 94.0
MS.gene44892.t1 MTR_7g407070 29.080 337 182 18 11 313 32 345 5.20e-21 94.4
MS.gene44892.t1 MTR_4g030830 26.650 394 199 15 11 346 9 370 5.23e-21 94.0
MS.gene44892.t1 MTR_2g046920 28.213 319 182 13 10 310 23 312 5.93e-21 93.6
MS.gene44892.t1 MTR_1g068875 25.806 310 194 13 11 306 4 291 6.66e-21 93.6
MS.gene44892.t1 MTR_2g047832 28.571 343 186 16 2 310 20 337 1.04e-20 93.6
MS.gene44892.t1 MTR_3g436150 28.793 323 191 12 11 311 32 337 1.22e-20 93.2
MS.gene44892.t1 MTR_7g007300 29.245 318 174 14 8 309 100 382 1.37e-20 93.2
MS.gene44892.t1 MTR_0667s0010 27.246 345 173 15 11 313 6 314 1.93e-20 92.4
MS.gene44892.t1 MTR_3g036430 27.551 294 166 12 11 301 20 269 2.18e-20 91.7
MS.gene44892.t1 MTR_1g115160 27.362 307 196 10 9 310 20 304 2.29e-20 92.0
MS.gene44892.t1 MTR_4g117550 26.161 409 216 16 3 371 9 371 2.35e-20 92.0
MS.gene44892.t1 MTR_4g061340 28.165 316 184 10 11 307 26 317 2.59e-20 92.0
MS.gene44892.t1 MTR_2g046900 28.923 325 180 14 10 310 27 324 2.95e-20 91.7
MS.gene44892.t1 MTR_7g017170 28.365 416 231 20 4 371 11 407 3.36e-20 92.0
MS.gene44892.t1 MTR_3g014540 26.632 383 222 15 11 368 29 377 3.51e-20 91.7
MS.gene44892.t1 MTR_3g030330 29.000 300 177 13 11 301 20 292 3.90e-20 91.3
MS.gene44892.t1 MTR_3g023930 30.640 297 164 14 11 301 34 294 4.17e-20 91.3
MS.gene44892.t1 MTR_3g010430 29.677 310 172 14 11 301 36 318 4.61e-20 91.7
MS.gene44892.t1 MTR_2g028130 26.146 371 212 15 11 341 5 353 5.32e-20 91.3
MS.gene44892.t1 MTR_3g010520 30.000 310 169 15 2 301 15 286 5.80e-20 90.5
MS.gene44892.t1 MTR_5g096630 23.798 416 253 14 5 371 12 412 5.80e-20 91.3
MS.gene44892.t1 MTR_3g083640 26.190 378 229 14 11 368 55 402 5.87e-20 91.3
MS.gene44892.t1 MTR_3g030350 26.963 382 229 17 11 368 35 390 6.84e-20 90.9
MS.gene44892.t1 MTR_7g070880 28.297 364 205 15 11 327 21 375 7.70e-20 90.9
MS.gene44892.t1 MTR_1g055070 28.571 273 159 10 5 253 43 303 8.17e-20 90.5
MS.gene44892.t1 MTR_0649s0020 28.822 399 221 17 11 368 11 387 8.21e-20 90.5
MS.gene44892.t1 MTR_2g021770 26.119 402 240 13 15 371 16 405 8.51e-20 90.9
MS.gene44892.t1 MTR_4g133170 26.415 318 179 14 11 305 4 289 1.09e-19 90.1
MS.gene44892.t1 MTR_3g007430 30.844 308 170 17 15 305 47 328 1.16e-19 90.1
MS.gene44892.t1 MTR_4g031770 27.812 320 180 15 11 309 4 293 1.31e-19 89.7
MS.gene44892.t1 MTR_2g026010 27.243 301 180 12 31 312 24 304 1.44e-19 90.1
MS.gene44892.t1 MTR_3g007330 29.697 330 172 16 11 319 48 338 1.63e-19 89.7
MS.gene44892.t1 MTR_0129s0070 26.209 393 231 15 15 369 21 392 1.66e-19 89.7
MS.gene44892.t1 MTR_1g088120 28.035 346 202 13 3 314 2 334 2.29e-19 89.4
MS.gene44892.t1 MTR_5g046300 26.537 309 192 11 11 309 4 287 2.33e-19 89.0
MS.gene44892.t1 MTR_5g046290 26.537 309 192 11 11 309 4 287 2.33e-19 89.0
MS.gene44892.t1 MTR_7g070440 27.219 338 198 15 15 325 11 327 2.38e-19 89.0
MS.gene44892.t1 MTR_1g068860 26.433 314 190 14 11 306 4 294 2.42e-19 89.0
MS.gene44892.t1 MTR_7g078900 27.941 340 192 11 15 314 16 342 2.47e-19 89.4
MS.gene44892.t1 MTR_7g013590 30.408 319 184 13 13 315 38 334 3.18e-19 89.0
MS.gene44892.t1 MTR_5g046260 26.490 302 171 13 11 309 4 257 3.21e-19 87.4
MS.gene44892.t1 MTR_3g013740 27.976 336 180 12 11 313 44 350 3.72e-19 89.0
MS.gene44892.t1 MTR_6g027910 29.299 314 175 15 15 301 13 306 3.89e-19 88.6
MS.gene44892.t1 MTR_7g062100 28.824 340 175 15 11 314 24 332 4.15e-19 88.6
MS.gene44892.t1 MTR_2g028140 27.778 342 184 15 11 308 5 327 4.22e-19 88.6
MS.gene44892.t1 MTR_5g056020 26.097 433 235 20 3 368 6 420 4.29e-19 89.4
MS.gene44892.t1 MTR_7g070830 27.988 343 195 14 11 310 21 354 6.47e-19 88.2
MS.gene44892.t1 MTR_7g066000 27.198 364 232 13 9 346 23 379 6.56e-19 88.2
MS.gene44892.t1 MTR_7g056003 29.429 333 182 15 15 314 19 331 8.04e-19 87.8
MS.gene44892.t1 MTR_4g129190 27.795 331 189 12 11 310 6 317 1.13e-18 87.4
MS.gene44892.t1 MTR_4g070550 28.818 347 178 19 11 313 5 326 1.14e-18 87.4
MS.gene44892.t1 MTR_2g426020 25.485 361 216 14 11 341 6 343 1.15e-18 87.4
MS.gene44892.t1 MTR_0707s0020 25.000 440 234 17 9 370 24 445 1.43e-18 87.4
MS.gene44892.t1 MTR_4g024890 24.619 394 250 11 7 368 6 384 1.76e-18 86.7
MS.gene44892.t1 MTR_6g007135 27.513 378 232 14 15 368 30 389 2.15e-18 86.3
MS.gene44892.t1 MTR_2g021252 23.577 369 228 12 18 369 54 385 2.18e-18 86.3
MS.gene44892.t1 MTR_6g086825 26.329 414 243 17 5 371 60 458 2.21e-18 87.0
MS.gene44892.t1 MTR_7g078860 28.571 343 193 14 6 314 4 328 2.26e-18 86.3
MS.gene44892.t1 MTR_7g056820 26.810 373 213 17 11 347 7 355 2.38e-18 86.3
MS.gene44892.t1 MTR_3g010590 27.508 309 165 15 11 301 39 306 2.47e-18 86.3
MS.gene44892.t1 MTR_1g114700 26.875 320 191 12 11 311 29 324 2.64e-18 86.3
MS.gene44892.t1 MTR_3g009240 30.351 313 172 16 11 307 36 318 3.01e-18 85.9
MS.gene44892.t1 MTR_7g056390 27.246 345 180 13 15 314 22 340 3.55e-18 85.9
MS.gene44892.t1 MTR_2g426070 27.324 355 195 14 12 327 7 337 3.60e-18 85.9
MS.gene44892.t1 MTR_4g055060 28.797 316 182 13 11 306 30 322 3.89e-18 85.5
MS.gene44892.t1 MTR_7g017040 25.441 397 252 14 5 369 10 394 4.37e-18 85.5
MS.gene44892.t1 MTR_8g101580 26.772 381 218 17 14 368 49 394 4.56e-18 85.5
MS.gene44892.t1 MTR_3g010920 27.707 314 172 14 3 301 33 306 4.67e-18 85.5
MS.gene44892.t1 MTR_8g464770 25.505 396 239 17 6 370 7 377 4.79e-18 85.1
MS.gene44892.t1 MTR_7g055870 25.236 424 222 17 15 360 17 423 5.00e-18 85.5
MS.gene44892.t1 MTR_5g021880 26.053 380 191 13 11 320 39 398 5.82e-18 85.9
MS.gene44892.t1 MTR_3g024040 25.753 299 197 10 18 314 38 313 6.14e-18 85.1
MS.gene44892.t1 MTR_5g021880 26.053 380 191 13 11 320 39 398 6.20e-18 85.5
MS.gene44892.t1 MTR_3g009260 30.573 314 167 17 11 307 41 320 6.48e-18 85.1
MS.gene44892.t1 MTR_3g006500 25.879 398 231 18 1 368 6 369 7.60e-18 84.7
MS.gene44892.t1 MTR_5g021880 26.053 380 191 13 11 320 39 398 8.04e-18 85.5
MS.gene44892.t1 MTR_7g077970 28.490 351 174 18 15 314 11 335 8.51e-18 84.7
MS.gene44892.t1 MTR_3g014570 26.074 326 189 13 11 314 29 324 8.83e-18 84.3
MS.gene44892.t1 MTR_1g068835 25.484 310 196 12 11 306 4 292 9.45e-18 84.3
MS.gene44892.t1 MTR_3g030240 25.134 374 210 13 11 370 40 357 1.14e-17 84.3
MS.gene44892.t1 MTR_5g097680 25.799 438 231 21 5 371 11 425 1.14e-17 84.7
MS.gene44892.t1 MTR_7g055930 24.883 426 221 19 15 360 17 423 1.18e-17 84.3
MS.gene44892.t1 MTR_1g054575 27.667 300 182 13 11 300 52 326 1.51e-17 84.7
MS.gene44892.t1 MTR_5g007610 27.679 336 188 14 11 319 41 348 1.82e-17 84.0
MS.gene44892.t1 MTR_3g010970 26.645 304 167 13 15 301 52 316 1.98e-17 83.6
MS.gene44892.t1 MTR_2g078850 27.124 306 174 11 15 301 34 309 2.08e-17 83.2
MS.gene44892.t1 MTR_7g056760 24.304 395 253 12 9 368 21 404 2.23e-17 83.6
MS.gene44892.t1 MTR_1g056710 27.374 358 199 17 11 344 34 354 2.28e-17 83.2
MS.gene44892.t1 MTR_2g028110 27.554 323 177 13 11 305 4 297 2.64e-17 83.2
MS.gene44892.t1 MTR_1g055200 49.398 83 38 2 106 186 5 85 2.68e-17 77.4
MS.gene44892.t1 MTR_0242s0060 25.882 340 201 12 7 310 5 329 3.10e-17 83.2
MS.gene44892.t1 MTR_0242s0040 25.882 340 201 12 7 310 5 329 3.10e-17 83.2
MS.gene44892.t1 MTR_3g011020 26.959 319 188 12 11 315 28 315 3.46e-17 82.8
MS.gene44892.t1 MTR_3g010390 26.769 325 188 14 11 306 33 336 5.59e-17 82.4
MS.gene44892.t1 MTR_8g099460 26.870 361 193 16 11 337 5 328 6.08e-17 82.0
MS.gene44892.t1 MTR_3g011120 26.455 378 234 16 10 363 13 370 6.45e-17 82.0
MS.gene44892.t1 MTR_1g055145 50.000 88 44 0 21 108 43 130 6.78e-17 80.5
MS.gene44892.t1 MTR_1g055145 52.113 71 31 2 219 289 132 199 1.02e-12 68.6
MS.gene44892.t1 MTR_0464s0020 27.988 343 187 15 15 314 27 352 8.40e-17 82.0
MS.gene44892.t1 MTR_5g096710 27.492 331 193 14 11 314 23 333 9.40e-17 81.6
MS.gene44892.t1 MTR_3g024150 27.213 305 173 14 15 301 39 312 9.55e-17 81.6
MS.gene44892.t1 MTR_2g025960 28.889 225 120 10 107 305 5 215 9.81e-17 80.5
MS.gene44892.t1 MTR_2g025420 26.359 368 213 15 11 337 6 356 1.14e-16 81.6
MS.gene44892.t1 MTR_7g056503 25.840 387 250 13 10 368 20 397 1.15e-16 81.3
MS.gene44892.t1 MTR_3g010620 27.575 301 165 13 15 301 40 301 1.16e-16 81.3
MS.gene44892.t1 MTR_7g067680 31.046 306 153 16 11 301 49 311 1.19e-16 81.3
MS.gene44892.t1 MTR_8g046200 24.524 420 239 13 15 373 20 422 1.20e-16 81.6
MS.gene44892.t1 MTR_5g059430 24.408 422 249 16 4 371 19 424 1.27e-16 81.3
MS.gene44892.t1 MTR_6g016285 25.587 426 228 16 7 368 17 417 1.55e-16 81.3
MS.gene44892.t1 MTR_3g013950 26.796 362 228 14 15 346 10 364 1.55e-16 80.9
MS.gene44892.t1 MTR_7g078840 27.520 367 195 14 3 314 2 352 1.68e-16 81.3
MS.gene44892.t1 MTR_0267s0050 26.944 360 228 14 15 346 10 362 1.72e-16 80.9
MS.gene44892.t1 MTR_8g039500 26.994 326 190 14 3 301 4 308 2.18e-16 80.1
MS.gene44892.t1 MTR_4g102410 24.272 412 253 14 3 371 53 448 2.21e-16 80.9
MS.gene44892.t1 MTR_1g007410 26.100 341 194 15 6 305 17 340 2.35e-16 80.5
MS.gene44892.t1 MTR_7g028660 27.273 341 195 12 1 310 1 319 2.60e-16 80.1
MS.gene44892.t1 MTR_4g019990 26.531 343 194 13 10 317 5 324 2.69e-16 80.1
MS.gene44892.t1 MTR_4g013185 27.151 372 198 15 15 327 14 371 3.00e-16 80.1
MS.gene44892.t1 MTR_2g461450 27.273 308 191 11 15 314 22 304 3.20e-16 79.7
MS.gene44892.t1 MTR_2g006360 28.094 299 154 14 15 308 50 292 3.34e-16 79.7
MS.gene44892.t1 MTR_8g046310 24.468 376 250 12 15 373 20 378 3.69e-16 79.7
MS.gene44892.t1 MTR_2g046800 28.161 348 180 16 11 314 14 335 3.73e-16 79.7
MS.gene44892.t1 MTR_2g426060 25.526 333 184 14 11 305 6 312 3.88e-16 79.7
MS.gene44892.t1 MTR_5g096910 23.077 403 256 14 3 371 9 391 3.99e-16 79.7
MS.gene44892.t1 MTR_6g013270 27.687 307 189 12 11 303 29 316 4.29e-16 79.7
MS.gene44892.t1 MTR_3g007300 29.043 303 162 14 11 307 49 304 4.57e-16 79.3
MS.gene44892.t1 MTR_1g055375 26.019 319 196 12 15 314 8 305 4.87e-16 79.3
MS.gene44892.t1 MTR_7g062060 23.558 416 244 15 6 369 7 400 5.95e-16 79.3
MS.gene44892.t1 MTR_6g055210 26.923 338 187 13 2 300 13 329 6.01e-16 79.3
MS.gene44892.t1 MTR_1g058190 26.367 311 184 11 9 309 33 308 6.11e-16 79.0
MS.gene44892.t1 MTR_0054s0090 23.729 413 254 15 3 371 9 404 6.25e-16 79.3
MS.gene44892.t1 MTR_4g122840 39.695 131 44 2 242 372 165 260 6.32e-16 77.4
MS.gene44892.t1 MTR_8g062660 27.273 319 181 15 6 299 17 309 8.24e-16 79.7
MS.gene44892.t1 MTR_4g030760 24.011 379 213 12 5 346 67 407 9.56e-16 79.0
MS.gene44892.t1 MTR_4g037465 25.789 380 218 12 11 350 21 376 9.69e-16 78.6
MS.gene44892.t1 MTR_4g028660 24.355 349 192 16 5 305 10 334 1.17e-15 78.2
MS.gene44892.t1 MTR_4g027450 24.355 349 192 16 5 305 10 334 1.17e-15 78.2
MS.gene44892.t1 MTR_0128s0020 26.593 361 221 16 8 342 15 357 1.20e-15 78.2
MS.gene44892.t1 MTR_2g043400 27.893 337 183 16 15 314 27 340 1.21e-15 78.6
MS.gene44892.t1 MTR_3g013770 26.752 314 188 13 11 305 33 323 1.64e-15 77.8
MS.gene44892.t1 MTR_7g066010 25.505 396 222 16 6 369 16 370 1.69e-15 77.8
MS.gene44892.t1 MTR_5g068040 28.438 320 174 13 15 310 20 308 1.93e-15 77.4
MS.gene44892.t1 MTR_7g061060 26.781 351 188 16 6 316 8 329 2.11e-15 77.4
MS.gene44892.t1 MTR_7g066030 26.161 409 246 17 1 369 11 403 2.27e-15 77.4
MS.gene44892.t1 MTR_2g021800 24.171 422 242 17 6 369 11 412 2.70e-15 77.4
MS.gene44892.t1 MTR_4g013180 26.257 358 203 15 9 325 9 346 2.70e-15 77.8
MS.gene44892.t1 MTR_3g011060 26.300 327 183 14 11 307 28 326 3.72e-15 76.6
MS.gene44892.t1 MTR_6g461660 26.513 347 194 14 3 307 11 338 3.96e-15 76.6
MS.gene44892.t1 MTR_1g112930 26.910 301 183 12 11 300 25 299 4.20e-15 76.6
MS.gene44892.t1 MTR_0054s0100 23.095 420 250 15 3 371 9 406 4.55e-15 76.6
MS.gene44892.t1 MTR_7g077990 25.507 345 196 13 1 310 3 321 5.40e-15 76.3
MS.gene44892.t1 MTR_6g034720 36.923 130 68 3 134 257 54 175 5.94e-15 73.9
MS.gene44892.t1 MTR_2g022000 23.558 416 225 16 3 352 8 396 7.50e-15 76.3
MS.gene44892.t1 MTR_6g086920 23.348 454 238 17 9 370 36 471 7.53e-15 76.3
MS.gene44892.t1 MTR_0129s0120 24.198 405 248 15 3 369 9 392 7.58e-15 75.9
MS.gene44892.t1 MTR_4g033495 25.527 427 237 18 11 388 27 421 9.88e-15 75.9
MS.gene44892.t1 MTR_4g130330 23.358 411 247 19 6 371 2 389 1.01e-14 75.5
MS.gene44892.t1 MTR_0064s0160 24.500 400 247 18 10 372 41 422 1.26e-14 75.5
MS.gene44892.t1 MTR_2g437110 26.619 417 237 18 9 384 20 408 1.47e-14 75.5
MS.gene44892.t1 MTR_6g017280 25.526 333 203 14 9 314 7 321 1.65e-14 74.7
MS.gene44892.t1 MTR_7g060940 26.961 408 226 18 3 367 14 392 1.93e-14 74.7
MS.gene44892.t1 MTR_2g104280 23.866 419 242 16 6 371 9 403 1.97e-14 74.7
MS.gene44892.t1 MTR_6g080680 23.256 387 253 11 10 367 18 389 2.17e-14 74.3
MS.gene44892.t1 MTR_7g091640 26.205 332 198 13 9 310 33 347 2.48e-14 74.3
MS.gene44892.t1 MTR_1g029650 24.169 331 199 11 15 314 12 321 2.63e-14 74.3
MS.gene44892.t1 MTR_0115s0020 23.399 406 250 16 11 372 10 398 2.66e-14 74.3
MS.gene44892.t1 MTR_7g077070 25.195 385 223 15 2 337 7 375 3.34e-14 73.9
MS.gene44892.t1 MTR_5g069390 23.729 413 258 14 4 373 19 417 3.96e-14 73.9
MS.gene44892.t1 MTR_2g047200 24.818 411 237 17 2 368 11 393 4.01e-14 73.6
MS.gene44892.t1 MTR_3g437520 28.448 348 182 17 15 314 27 355 4.20e-14 73.9
MS.gene44892.t1 MTR_3g023940 27.273 308 182 11 11 301 34 316 4.91e-14 73.2
MS.gene44892.t1 MTR_7g061050 25.369 339 197 12 6 314 8 320 5.76e-14 73.2
MS.gene44892.t1 MTR_3g058480 30.705 241 120 11 11 226 39 257 6.25e-14 72.4
MS.gene44892.t1 MTR_1g009110 25.143 350 227 14 15 345 18 351 6.59e-14 72.8
MS.gene44892.t1 MTR_5g010660 27.744 328 172 11 11 313 34 321 7.45e-14 73.2
MS.gene44892.t1 MTR_5g069760 24.932 369 212 16 9 341 4 343 7.58e-14 72.8
MS.gene44892.t1 MTR_4g013175 27.171 357 185 18 31 327 30 371 9.60e-14 72.8
MS.gene44892.t1 MTR_0128s0070 26.829 328 196 15 8 310 19 327 9.66e-14 72.4
MS.gene44892.t1 MTR_7g078040 26.496 351 198 13 7 310 5 342 9.91e-14 72.8
MS.gene44892.t1 MTR_7g061090 24.118 340 201 13 9 310 20 340 1.03e-13 72.4
MS.gene44892.t1 MTR_7g056797 23.410 393 259 11 8 368 20 402 1.07e-13 72.4
MS.gene44892.t1 MTR_7g057270 24.852 338 206 13 11 315 26 348 1.18e-13 72.4
MS.gene44892.t1 MTR_8g012090 24.214 318 177 11 15 305 20 300 1.19e-13 71.6
MS.gene44892.t1 MTR_6g004210 28.660 321 174 15 24 307 38 340 1.30e-13 72.4
MS.gene44892.t1 MTR_4g055820 25.575 348 195 16 5 305 8 338 1.49e-13 71.6
MS.gene44892.t1 MTR_3g010870 25.333 300 190 9 11 301 37 311 1.52e-13 72.0
MS.gene44892.t1 MTR_1g015730 25.731 342 182 12 10 314 8 314 1.57e-13 72.0
MS.gene44892.t1 MTR_8g013005 62.745 51 19 0 321 371 4 54 2.10e-13 65.1
MS.gene44892.t1 MTR_7g060960 27.660 329 174 16 9 319 30 312 2.11e-13 71.2
MS.gene44892.t1 MTR_5g057040 28.571 196 115 5 11 192 46 230 2.24e-13 72.4
MS.gene44892.t1 MTR_7g052150 27.654 358 177 18 5 320 16 333 2.32e-13 71.2
MS.gene44892.t1 MTR_8g467670 26.415 318 188 15 10 301 13 310 2.39e-13 71.2
MS.gene44892.t1 MTR_5g008530 63.934 61 20 1 7 67 14 72 2.70e-13 65.1
MS.gene44892.t1 MTR_8g073550 32.487 197 109 7 10 192 29 215 2.79e-13 69.3
MS.gene44892.t1 MTR_5g069930 25.373 335 189 15 9 310 4 310 2.88e-13 70.9
MS.gene44892.t1 MTR_2g031680 24.451 319 185 11 11 305 6 292 3.12e-13 70.9
MS.gene44892.t1 MTR_6g048140 27.301 326 161 15 11 301 39 323 3.96e-13 70.9
MS.gene44892.t1 MTR_3g058470 31.401 207 119 7 11 198 37 239 4.30e-13 70.5
MS.gene44892.t1 MTR_5g097350 22.857 385 236 14 20 369 25 383 4.72e-13 70.5
MS.gene44892.t1 MTR_4g023100 64.000 50 16 1 321 370 66 113 4.86e-13 65.9
MS.gene44892.t1 MTR_7g055830 25.063 395 206 16 15 371 17 359 5.35e-13 70.1
MS.gene44892.t1 MTR_4g014370 22.685 432 254 14 1 374 1 410 5.96e-13 70.1
MS.gene44892.t1 MTR_4g031020 23.624 436 238 16 7 367 11 426 6.06e-13 70.1
MS.gene44892.t1 MTR_0097s0030 25.625 320 189 13 15 308 18 314 6.69e-13 70.1
MS.gene44892.t1 MTR_2g047240 25.625 320 189 13 15 308 18 314 6.69e-13 70.1
MS.gene44892.t1 MTR_5g072060 25.000 372 213 13 10 346 5 345 6.95e-13 70.5
MS.gene44892.t1 MTR_7g016930 26.786 336 168 16 5 302 10 305 7.68e-13 69.3
MS.gene44892.t1 MTR_8g066440 26.119 402 232 16 11 369 23 402 8.12e-13 69.7
MS.gene44892.t1 MTR_3g080370 24.619 394 236 14 25 368 35 417 8.51e-13 69.7
MS.gene44892.t1 MTR_7g091630 24.773 331 208 11 9 310 30 348 1.06e-12 69.3
MS.gene44892.t1 MTR_5g027330 22.910 323 210 10 14 311 43 351 1.09e-12 69.7
MS.gene44892.t1 MTR_5g027370 22.936 327 205 10 14 311 32 340 1.10e-12 69.3
MS.gene44892.t1 MTR_6g478230 23.415 410 248 16 4 371 20 405 1.21e-12 69.3
MS.gene44892.t1 MTR_6g048120 25.240 313 190 12 11 301 36 326 1.57e-12 68.9
MS.gene44892.t1 MTR_3g009250 31.841 201 107 9 11 199 41 223 1.82e-12 67.0
MS.gene44892.t1 MTR_6g034830 35.965 114 60 1 6 119 15 115 2.21e-12 63.9
MS.gene44892.t1 MTR_5g057643 28.767 219 129 6 11 215 46 251 2.21e-12 67.4
MS.gene44892.t1 MTR_4g080200 28.636 220 130 7 15 222 7 211 2.31e-12 68.2
MS.gene44892.t1 MTR_3g030310 25.796 314 182 13 11 301 21 306 2.61e-12 68.2
MS.gene44892.t1 MTR_1g442850 27.607 326 176 14 15 307 9 307 2.67e-12 68.2
MS.gene44892.t1 MTR_3g464500 26.446 363 189 17 10 325 26 357 2.92e-12 68.2
MS.gene44892.t1 MTR_3g006530 24.675 308 192 13 11 301 40 324 2.92e-12 68.2
MS.gene44892.t1 MTR_2g066170 22.922 397 262 13 3 371 4 384 2.94e-12 67.8
MS.gene44892.t1 MTR_7g061010 25.495 404 229 17 4 367 15 386 3.13e-12 67.8
MS.gene44892.t1 MTR_2g047892 23.214 392 250 14 11 368 22 396 3.55e-12 67.8
MS.gene44892.t1 MTR_1g071010 27.077 325 190 16 11 307 15 320 3.80e-12 67.8
MS.gene44892.t1 MTR_1g007450 26.000 350 201 16 5 311 6 340 4.70e-12 67.4
MS.gene44892.t1 MTR_5g023570 40.541 111 51 4 10 115 36 136 5.36e-12 63.5
MS.gene44892.t1 MTR_3g011650 33.831 201 100 10 13 199 81 262 5.66e-12 66.2
MS.gene44892.t1 MTR_5g043160 26.453 344 192 14 15 310 54 384 6.22e-12 67.4
MS.gene44892.t1 MTR_7g055987 26.284 331 178 13 15 314 24 319 6.61e-12 66.6
MS.gene44892.t1 MTR_7g022600 26.048 334 200 13 15 310 27 351 7.99e-12 66.6
MS.gene44892.t1 MTR_2g047878 25.132 378 236 14 7 368 17 363 1.03e-11 66.2
MS.gene44892.t1 MTR_3g096250 33.533 167 96 6 11 167 47 208 1.06e-11 65.9
MS.gene44892.t1 MTR_1g050308 25.795 283 168 11 3 266 26 285 1.18e-11 65.9
MS.gene44892.t1 MTR_3g464470 25.691 362 190 16 10 325 6 334 1.31e-11 65.9
MS.gene44892.t1 MTR_2g010920 24.079 353 197 13 15 314 24 358 1.71e-11 65.9
MS.gene44892.t1 MTR_2g043410 27.515 338 183 14 15 314 26 339 1.92e-11 65.5
MS.gene44892.t1 MTR_7g056200 26.935 323 182 13 7 307 19 309 1.99e-11 65.5
MS.gene44892.t1 MTR_7g037670 29.958 237 117 10 11 231 23 226 2.00e-11 65.1
MS.gene44892.t1 MTR_4g006350 24.234 359 227 14 11 337 494 839 2.12e-11 66.2
MS.gene44892.t1 MTR_3g058440 27.660 235 135 9 11 227 35 252 3.48e-11 63.9
MS.gene44892.t1 MTR_6g079810 22.410 415 253 17 7 371 66 461 3.98e-11 64.7
MS.gene44892.t1 MTR_7g055977 23.810 399 244 15 9 369 5 381 4.00e-11 64.3
MS.gene44892.t1 MTR_5g048160 22.829 403 255 17 11 372 4 391 4.08e-11 64.3
MS.gene44892.t1 MTR_2g010950 26.061 330 199 14 15 314 24 338 4.27e-11 64.3
MS.gene44892.t1 MTR_5g096900 28.169 284 146 15 10 257 11 272 4.57e-11 63.9
MS.gene44892.t1 MTR_1g112010 23.677 359 213 12 33 367 2 323 5.03e-11 63.9
MS.gene44892.t1 MTR_7g066080 25.779 353 192 17 4 313 9 334 5.04e-11 64.3
MS.gene44892.t1 MTR_4g129160 25.862 348 198 17 11 314 7 338 7.14e-11 63.5
MS.gene44892.t1 MTR_6g014720 25.333 300 190 12 11 303 26 298 8.07e-11 63.5
MS.gene44892.t1 MTR_4g011660 25.000 344 199 15 11 310 19 347 8.31e-11 63.5
MS.gene44892.t1 MTR_5g022045 24.620 329 193 15 11 302 35 345 9.46e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44892.t1 AT3G06240 26.277 411 241 15 2 368 27 419 2.17e-24 104
MS.gene44892.t1 AT3G23880 30.321 343 200 17 11 339 14 331 1.68e-23 100
MS.gene44892.t1 AT4G12560 26.959 319 192 11 11 306 4 304 6.56e-23 99.8
MS.gene44892.t1 AT4G12560 26.959 319 192 11 11 306 4 304 6.56e-23 99.8
MS.gene44892.t1 AT4G12560 26.959 319 192 11 11 306 4 304 6.56e-23 99.8
MS.gene44892.t1 AT1G12870 23.529 374 228 17 11 352 33 380 8.19e-15 75.9
MS.gene44892.t1 AT3G16210 24.501 351 205 14 10 344 4 310 9.71e-15 75.5
MS.gene44892.t1 AT3G21120 25.660 265 164 11 9 258 1 247 2.60e-13 71.2
MS.gene44892.t1 AT3G10430 26.437 261 150 12 11 256 5 238 3.35e-13 70.9
MS.gene44892.t1 AT2G40925 26.019 319 187 11 11 305 27 320 5.65e-13 70.1
MS.gene44892.t1 AT3G16590 24.590 305 174 14 11 291 5 277 5.50e-12 67.0
MS.gene44892.t1 AT3G07870 24.922 321 187 13 11 301 28 324 5.58e-12 67.4
MS.gene44892.t1 AT3G47150 30.000 170 112 2 7 169 8 177 8.25e-12 66.6
MS.gene44892.t1 AT3G08750 24.585 301 172 14 11 296 12 272 1.14e-11 66.2

Find 77 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTATTGATAACTCCAAATT+TGG 0.106857 5.2:-59368007 MS.gene44892:CDS
ATAGATAGAGATTCCAAATT+TGG 0.178392 5.2:+59367994 None:intergenic
GGGGCTATTCACTTCTTAAA+TGG 0.178554 5.2:-59367556 MS.gene44892:CDS
GCATATCATTTATATGGTTT+TGG 0.189994 5.2:-59367763 MS.gene44892:CDS
TTGCAATCAATAAGAGAATT+TGG 0.215589 5.2:+59367793 None:intergenic
AAAGTAGAGCCGCTCTTAAA+TGG 0.215849 5.2:-59367577 MS.gene44892:CDS
CTTCTTCGTATCATCTTCTT+AGG 0.228771 5.2:+59367067 None:intergenic
GGAGTTATCAATAGAATTCT+AGG 0.261434 5.2:+59368015 None:intergenic
TTAGATGCATATCATTTATA+TGG 0.266019 5.2:-59367769 MS.gene44892:CDS
AAAATGTGAATTTGCGAAAT+TGG 0.266461 5.2:+59368062 None:intergenic
CTAGTAAAGTGTATGATTTA+TGG 0.269260 5.2:-59367417 MS.gene44892:CDS
TCCTTCTGTGGCAGTGAGTA+TGG 0.279382 5.2:-59367151 MS.gene44892:CDS
AATACAACGTGAAATCTTCT+TGG 0.300999 5.2:-59367321 MS.gene44892:CDS
ATAATGGTACGGTTGAAATA+TGG 0.319926 5.2:-59367354 MS.gene44892:CDS
GTGGTTCATGTCTTTGTCTA+TGG 0.320980 5.2:-59367846 MS.gene44892:CDS
TTAGAGGATGTCTCAGTCTA+TGG 0.327181 5.2:-59367390 MS.gene44892:CDS
TATGATTTATGGGTATTTAG+AGG 0.334732 5.2:-59367406 MS.gene44892:CDS
CTGTCCTTTGTCATTATACT+TGG 0.343254 5.2:+59367189 None:intergenic
TAGTAAAGTGTATGATTTAT+GGG 0.344085 5.2:-59367416 MS.gene44892:CDS
AAAACTAATATTCGATGAAT+AGG 0.356667 5.2:+59367936 None:intergenic
ACTTCACAGGTAACATTAGA+AGG 0.356806 5.2:+59368139 None:intergenic
CTCCCTTTGCATTAAATGAT+AGG 0.362061 5.2:+59367480 None:intergenic
GGGCTATTCACTTCTTAAAT+GGG 0.374881 5.2:-59367555 MS.gene44892:CDS
GAATCTCTGCTCTCAATTCC+TGG 0.380489 5.2:-59367106 MS.gene44892:CDS
AGTTAACTTATCATAATCAT+TGG 0.384533 5.2:+59367690 None:intergenic
ATTTAAGAGCGGCTCTACTT+TGG 0.386573 5.2:+59367579 None:intergenic
ATGTCTCAGTCTATGGGATA+TGG 0.395291 5.2:-59367383 MS.gene44892:CDS
TATGATAAGTTAACTCGCTT+AGG 0.402329 5.2:-59367682 MS.gene44892:CDS
AAGTAGAGCCGCTCTTAAAT+GGG 0.411608 5.2:-59367576 MS.gene44892:CDS
AATTCTAGGAGTGTGTGTTT+TGG 0.416497 5.2:+59368029 None:intergenic
TCAAATGCGTTTGTAAGTCT+TGG 0.419056 5.2:-59368104 MS.gene44892:CDS
TGCCTATCATTTAATGCAAA+GGG 0.419648 5.2:-59367482 MS.gene44892:CDS
TGGGATATGGCACATGATAA+TGG 0.428223 5.2:-59367370 MS.gene44892:CDS
TTTCACGGGCCAGGCAATAA+GGG 0.428270 5.2:+59367605 None:intergenic
TCTTAAATGGGGCTATTCAC+TGG 0.428672 5.2:-59367543 MS.gene44892:CDS
ATGATAAGTTAACTCGCTTA+GGG 0.434700 5.2:-59367681 MS.gene44892:CDS
CGAGTCAAGGGATGATTACT+TGG 0.438021 5.2:-59367734 MS.gene44892:CDS
TTGCCAGCTGATATAACATC+TGG 0.451556 5.2:-59367442 MS.gene44892:CDS
TAATTGTTTCCCTTATTGCC+TGG 0.452609 5.2:-59367614 MS.gene44892:CDS
CTCTCAATTCCTGGTGGTGA+CGG 0.454168 5.2:-59367097 MS.gene44892:CDS
GTTAACTTATCATAATCATT+GGG 0.471250 5.2:+59367691 None:intergenic
GAACCAGATGTTATATCAGC+TGG 0.480523 5.2:+59367439 None:intergenic
TTGCCTATCATTTAATGCAA+AGG 0.491924 5.2:-59367483 MS.gene44892:CDS
AAATGGGGCTATTCACTGGT+TGG 0.496742 5.2:-59367539 MS.gene44892:CDS
TAATGGTACGGTTGAAATAT+GGG 0.505080 5.2:-59367353 MS.gene44892:CDS
TAATGCGTGGAACGAAATTG+AGG 0.520856 5.2:-59367641 MS.gene44892:CDS
AATTTGTGAACTCCAGTGGA+TGG 0.538712 5.2:+59367820 None:intergenic
TTTACAGAACTTGATATCAA+AGG 0.542210 5.2:-59367898 MS.gene44892:CDS
AGATGATACGAAGAAGAAGA+AGG 0.542973 5.2:-59367060 MS.gene44892:CDS
GATATCGTTGGAACAGATGC+TGG 0.548194 5.2:-59367223 MS.gene44892:CDS
ATATCAAAGGTTCATGCAGA+GGG 0.552926 5.2:-59367885 MS.gene44892:CDS
AACAGATGCTGGTAATGTAT+TGG 0.556500 5.2:-59367212 MS.gene44892:CDS
TAGAGGATGTCTCAGTCTAT+GGG 0.565351 5.2:-59367389 MS.gene44892:CDS
TACGGTTGAAATATGGGTGA+TGG 0.567614 5.2:-59367347 MS.gene44892:CDS
TCCATACTCACTGCCACAGA+AGG 0.570558 5.2:+59367150 None:intergenic
CTAGAGCATCACTCCTTCTG+TGG 0.572771 5.2:-59367163 MS.gene44892:CDS
TGTCTATGGAATCCATCCAC+TGG 0.573997 5.2:-59367832 MS.gene44892:CDS
GGTTGACCACCGTCACCACC+AGG 0.576896 5.2:+59367088 None:intergenic
TATAAATTTGTGAACTCCAG+TGG 0.583992 5.2:+59367816 None:intergenic
TCAATTCCTGGTGGTGACGG+TGG 0.598082 5.2:-59367094 MS.gene44892:CDS
AATGCGTGGAACGAAATTGA+GGG 0.598090 5.2:-59367640 MS.gene44892:CDS
GATATCAAAGGTTCATGCAG+AGG 0.602085 5.2:-59367886 MS.gene44892:CDS
AAGCAAATAAGAGACTTCAC+AGG 0.607636 5.2:+59368126 None:intergenic
GGCTATTCACTTCTTAAATG+GGG 0.613922 5.2:-59367554 MS.gene44892:CDS
GATGTTATATCAGCTGGCAA+AGG 0.615939 5.2:+59367445 None:intergenic
TCAAGTTCTGTAAAAGACTG+TGG 0.621450 5.2:+59367907 None:intergenic
ATCATTGGGATCATATGACA+TGG 0.622977 5.2:+59367705 None:intergenic
ATTCTGTATACATAACCACT+AGG 0.630116 5.2:+59367125 None:intergenic
TATGGCACATGATAATGGTA+CGG 0.635656 5.2:-59367365 MS.gene44892:CDS
TCTCATTGAGAGCTAATGCG+TGG 0.638588 5.2:-59367654 MS.gene44892:CDS
TTCTGTATACATAACCACTA+GGG 0.647948 5.2:+59367126 None:intergenic
TTGGCCAAGTATAATGACAA+AGG 0.653383 5.2:-59367193 MS.gene44892:CDS
AGTAGAGCCGCTCTTAAATG+GGG 0.658045 5.2:-59367575 MS.gene44892:CDS
TGATACGAAGAAGAAGAAGG+AGG 0.671930 5.2:-59367057 MS.gene44892:CDS
CAGTGAGTATGGATCCCTAG+TGG 0.694145 5.2:-59367140 MS.gene44892:CDS
TGAATAGCCCCATTTAAGAG+CGG 0.694398 5.2:+59367568 None:intergenic
TCTCTGCTCTCAATTCCTGG+TGG 0.720941 5.2:-59367103 MS.gene44892:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACTAATATTCGATGAAT+AGG + chr5.2:59367313-59367332 None:intergenic 20.0%
!! AGTTAACTTATCATAATCAT+TGG + chr5.2:59367559-59367578 None:intergenic 20.0%
!! ATTTGAAAAATTAACACAAG+AGG + chr5.2:59367087-59367106 None:intergenic 20.0%
!! GTTAACTTATCATAATCATT+GGG + chr5.2:59367558-59367577 None:intergenic 20.0%
!! TAGTAAAGTGTATGATTTAT+GGG - chr5.2:59367830-59367849 MS.gene44892:CDS 20.0%
!! TTAGATGCATATCATTTATA+TGG - chr5.2:59367477-59367496 MS.gene44892:CDS 20.0%
!!! CATATCATTTATATGGTTTT+GGG - chr5.2:59367484-59367503 MS.gene44892:CDS 20.0%
! AAAATGTGAATTTGCGAAAT+TGG + chr5.2:59367187-59367206 None:intergenic 25.0%
! ATAGATAGAGATTCCAAATT+TGG + chr5.2:59367255-59367274 None:intergenic 25.0%
! CTAGTAAAGTGTATGATTTA+TGG - chr5.2:59367829-59367848 MS.gene44892:CDS 25.0%
! TATGATTTATGGGTATTTAG+AGG - chr5.2:59367840-59367859 MS.gene44892:CDS 25.0%
! TTGCAATCAATAAGAGAATT+TGG + chr5.2:59367456-59367475 None:intergenic 25.0%
! TTTACAGAACTTGATATCAA+AGG - chr5.2:59367348-59367367 MS.gene44892:CDS 25.0%
!! GCATATCATTTATATGGTTT+TGG - chr5.2:59367483-59367502 MS.gene44892:CDS 25.0%
!! TCTATTGATAACTCCAAATT+TGG - chr5.2:59367239-59367258 MS.gene44892:CDS 25.0%
!!! ACTCTTGTTTTATCTTTTGA+TGG - chr5.2:59367954-59367973 MS.gene44892:CDS 25.0%
AATACAACGTGAAATCTTCT+TGG - chr5.2:59367925-59367944 MS.gene44892:CDS 30.0%
ATAATGGTACGGTTGAAATA+TGG - chr5.2:59367892-59367911 MS.gene44892:CDS 30.0%
ATGATAAGTTAACTCGCTTA+GGG - chr5.2:59367565-59367584 MS.gene44892:CDS 30.0%
ATTCTGTATACATAACCACT+AGG + chr5.2:59368124-59368143 None:intergenic 30.0%
GGAGTTATCAATAGAATTCT+AGG + chr5.2:59367234-59367253 None:intergenic 30.0%
TAATGGTACGGTTGAAATAT+GGG - chr5.2:59367893-59367912 MS.gene44892:CDS 30.0%
TATAAATTTGTGAACTCCAG+TGG + chr5.2:59367433-59367452 None:intergenic 30.0%
TATGATAAGTTAACTCGCTT+AGG - chr5.2:59367564-59367583 MS.gene44892:CDS 30.0%
TGCCTATCATTTAATGCAAA+GGG - chr5.2:59367764-59367783 MS.gene44892:CDS 30.0%
TTCTGTATACATAACCACTA+GGG + chr5.2:59368123-59368142 None:intergenic 30.0%
TTGCCTATCATTTAATGCAA+AGG - chr5.2:59367763-59367782 MS.gene44892:CDS 30.0%
AAGCAAATAAGAGACTTCAC+AGG + chr5.2:59367123-59367142 None:intergenic 35.0%
ACAAAAAGTGGTGATATCGT+TGG - chr5.2:59368011-59368030 MS.gene44892:CDS 35.0%
ACTTCACAGGTAACATTAGA+AGG + chr5.2:59367110-59367129 None:intergenic 35.0%
AGATGATACGAAGAAGAAGA+AGG - chr5.2:59368186-59368205 MS.gene44892:CDS 35.0%
ATATCAAAGGTTCATGCAGA+GGG - chr5.2:59367361-59367380 MS.gene44892:CDS 35.0%
ATCATTGGGATCATATGACA+TGG + chr5.2:59367544-59367563 None:intergenic 35.0%
CTCCCTTTGCATTAAATGAT+AGG + chr5.2:59367769-59367788 None:intergenic 35.0%
CTGTCCTTTGTCATTATACT+TGG + chr5.2:59368060-59368079 None:intergenic 35.0%
CTTCTTCGTATCATCTTCTT+AGG + chr5.2:59368182-59368201 None:intergenic 35.0%
GGCTATTCACTTCTTAAATG+GGG - chr5.2:59367692-59367711 MS.gene44892:CDS 35.0%
GGGCTATTCACTTCTTAAAT+GGG - chr5.2:59367691-59367710 MS.gene44892:CDS 35.0%
TAATTGTTTCCCTTATTGCC+TGG - chr5.2:59367632-59367651 MS.gene44892:CDS 35.0%
TCAAATGCGTTTGTAAGTCT+TGG - chr5.2:59367142-59367161 MS.gene44892:CDS 35.0%
TCAAGTTCTGTAAAAGACTG+TGG + chr5.2:59367342-59367361 None:intergenic 35.0%
TTGGCCAAGTATAATGACAA+AGG - chr5.2:59368053-59368072 MS.gene44892:CDS 35.0%
! AACAGATGCTGGTAATGTAT+TGG - chr5.2:59368034-59368053 MS.gene44892:CDS 35.0%
!! AATTCTAGGAGTGTGTGTTT+TGG + chr5.2:59367220-59367239 None:intergenic 35.0%
!! TATGGCACATGATAATGGTA+CGG - chr5.2:59367881-59367900 MS.gene44892:CDS 35.0%
!!! CTCTACTTTGGAATTTTCAC+GGG + chr5.2:59367658-59367677 None:intergenic 35.0%
!!! GCTCTACTTTGGAATTTTCA+CGG + chr5.2:59367659-59367678 None:intergenic 35.0%
AAAGTAGAGCCGCTCTTAAA+TGG - chr5.2:59367669-59367688 MS.gene44892:CDS 40.0%
AAGTAGAGCCGCTCTTAAAT+GGG - chr5.2:59367670-59367689 MS.gene44892:CDS 40.0%
AATGCGTGGAACGAAATTGA+GGG - chr5.2:59367606-59367625 MS.gene44892:CDS 40.0%
AATTTGTGAACTCCAGTGGA+TGG + chr5.2:59367429-59367448 None:intergenic 40.0%
ATGTCTCAGTCTATGGGATA+TGG - chr5.2:59367863-59367882 MS.gene44892:CDS 40.0%
ATTTAAGAGCGGCTCTACTT+TGG + chr5.2:59367670-59367689 None:intergenic 40.0%
GAACCAGATGTTATATCAGC+TGG + chr5.2:59367810-59367829 None:intergenic 40.0%
GATATCAAAGGTTCATGCAG+AGG - chr5.2:59367360-59367379 MS.gene44892:CDS 40.0%
GATGTTATATCAGCTGGCAA+AGG + chr5.2:59367804-59367823 None:intergenic 40.0%
GGGGCTATTCACTTCTTAAA+TGG - chr5.2:59367690-59367709 MS.gene44892:CDS 40.0%
GTGGTTCATGTCTTTGTCTA+TGG - chr5.2:59367400-59367419 MS.gene44892:CDS 40.0%
TAATGCGTGGAACGAAATTG+AGG - chr5.2:59367605-59367624 MS.gene44892:CDS 40.0%
TACGGTTGAAATATGGGTGA+TGG - chr5.2:59367899-59367918 MS.gene44892:CDS 40.0%
TAGAGGATGTCTCAGTCTAT+GGG - chr5.2:59367857-59367876 MS.gene44892:CDS 40.0%
TCTTAAATGGGGCTATTCAC+TGG - chr5.2:59367682-59367701 MS.gene44892:CDS 40.0%
TGAATAGCCCCATTTAAGAG+CGG + chr5.2:59367681-59367700 None:intergenic 40.0%
TGATACGAAGAAGAAGAAGG+AGG - chr5.2:59368189-59368208 MS.gene44892:CDS 40.0%
TGGGATATGGCACATGATAA+TGG - chr5.2:59367876-59367895 MS.gene44892:CDS 40.0%
TTAGAGGATGTCTCAGTCTA+TGG - chr5.2:59367856-59367875 MS.gene44892:CDS 40.0%
TTGCCAGCTGATATAACATC+TGG - chr5.2:59367804-59367823 MS.gene44892:CDS 40.0%
! GGGTTTATACTTTTGAGCTG+TGG - chr5.2:59367381-59367400 MS.gene44892:CDS 40.0%
!! CACTTTTTGTACCGTATGTC+GGG + chr5.2:59368001-59368020 None:intergenic 40.0%
!! TTTTGGGTATGACGAGTCAA+GGG - chr5.2:59367500-59367519 MS.gene44892:CDS 40.0%
!!! CACTATTTTTGCCCGACATA+CGG - chr5.2:59367987-59368006 MS.gene44892:CDS 40.0%
!!! CCACTTTTTGTACCGTATGT+CGG + chr5.2:59368002-59368021 None:intergenic 40.0%
AAATGGGGCTATTCACTGGT+TGG - chr5.2:59367707-59367726 MS.gene44892:CDS 45.0%
AGTAGAGCCGCTCTTAAATG+GGG - chr5.2:59367671-59367690 MS.gene44892:CDS 45.0%
CCGACATACGGTACAAAAAG+TGG - chr5.2:59367999-59368018 MS.gene44892:CDS 45.0%
CGAGTCAAGGGATGATTACT+TGG - chr5.2:59367512-59367531 MS.gene44892:CDS 45.0%
GAATCTCTGCTCTCAATTCC+TGG - chr5.2:59368140-59368159 MS.gene44892:CDS 45.0%
GATATCGTTGGAACAGATGC+TGG - chr5.2:59368023-59368042 MS.gene44892:CDS 45.0%
GTCGGGCAAAAATAGTGAGT+GGG + chr5.2:59367984-59368003 None:intergenic 45.0%
TCTCATTGAGAGCTAATGCG+TGG - chr5.2:59367592-59367611 MS.gene44892:CDS 45.0%
TGTCGGGCAAAAATAGTGAG+TGG + chr5.2:59367985-59368004 None:intergenic 45.0%
TGTCTATGGAATCCATCCAC+TGG - chr5.2:59367414-59367433 MS.gene44892:CDS 45.0%
!! GTTTTGGGTATGACGAGTCA+AGG - chr5.2:59367499-59367518 MS.gene44892:CDS 45.0%
!! TCTAGGAGTGTGTGTTTTGG+CGG + chr5.2:59367217-59367236 None:intergenic 45.0%
CAGTGAGTATGGATCCCTAG+TGG - chr5.2:59368106-59368125 MS.gene44892:CDS 50.0%
TCCATACTCACTGCCACAGA+AGG + chr5.2:59368099-59368118 None:intergenic 50.0%
TCCTTCTGTGGCAGTGAGTA+TGG - chr5.2:59368095-59368114 MS.gene44892:CDS 50.0%
TCTCTGCTCTCAATTCCTGG+TGG - chr5.2:59368143-59368162 MS.gene44892:CDS 50.0%
TTTCACGGGCCAGGCAATAA+GGG + chr5.2:59367644-59367663 None:intergenic 50.0%
! CTAGAGCATCACTCCTTCTG+TGG - chr5.2:59368083-59368102 MS.gene44892:CDS 50.0%
! CTCTCAATTCCTGGTGGTGA+CGG - chr5.2:59368149-59368168 MS.gene44892:CDS 50.0%
! TTTTCACGGGCCAGGCAATA+AGG + chr5.2:59367645-59367664 None:intergenic 50.0%
!!! CTTTGGAATTTTCACGGGCC+AGG + chr5.2:59367653-59367672 None:intergenic 50.0%
!! TCAATTCCTGGTGGTGACGG+TGG - chr5.2:59368152-59368171 MS.gene44892:CDS 55.0%
GGTTGACCACCGTCACCACC+AGG + chr5.2:59368161-59368180 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 59367051 59368217 59367051 ID=MS.gene44892
chr5.2 mRNA 59367051 59368217 59367051 ID=MS.gene44892.t1;Parent=MS.gene44892
chr5.2 exon 59367051 59368217 59367051 ID=MS.gene44892.t1.exon1;Parent=MS.gene44892.t1
chr5.2 CDS 59367051 59368217 59367051 ID=cds.MS.gene44892.t1;Parent=MS.gene44892.t1
Gene Sequence

>MS.gene44892

ATGGAGACGATGAAGAAAACAGAGCTATATCTTCCTCTTGTGTTAATTTTTCAAATCCTTCTAATGTTACCTGTGAAGTCTCTTATTTGCTTCAAATGCGTTTGTAAGTCTTGGTTTTCTATTATATCTGATACCAATTTCGCAAATTCACATTTTCAACTTACCGCCAAAACACACACTCCTAGAATTCTATTGATAACTCCAAATTTGGAATCTCTATCTATTGATTTTGAAACATCACTTTACGATGATAGTGCTTCCTATTCATCGAATATTAGTTTTTTGCTTCCACAGTCTTTTACAGAACTTGATATCAAAGGTTCATGCAGAGGGTTTATACTTTTGAGCTGTGGTTCATGTCTTTGTCTATGGAATCCATCCACTGGAGTTCACAAATTTATACCAAATTCTCTTATTGATTGCAATTTAGATGCATATCATTTATATGGTTTTGGGTATGACGAGTCAAGGGATGATTACTTGGTGCTTTCCATGTCATATGATCCCAATGATTATGATAAGTTAACTCGCTTAGGGCTTTTCTCATTGAGAGCTAATGCGTGGAACGAAATTGAGGGTGATAATTGTTTCCCTTATTGCCTGGCCCGTGAAAATTCCAAAGTAGAGCCGCTCTTAAATGGGGCTATTCACTTCTTAAATGGGGCTATTCACTGGTTGGCTCTTTCTTATGATATATTAACGAATGTTATTCTTGCCTATCATTTAATGCAAAGGGAGCTTCTAGAGTTGCCTTTGCCAGCTGATATAACATCTGGTTCTAGTAAAGTGTATGATTTATGGGTATTTAGAGGATGTCTCAGTCTATGGGATATGGCACATGATAATGGTACGGTTGAAATATGGGTGATGGAAAAATACAACGTGAAATCTTCTTGGACTAAGACTCTTGTTTTATCTTTTGATGGAATTCCCACTCACTATTTTTGCCCGACATACGGTACAAAAAGTGGTGATATCGTTGGAACAGATGCTGGTAATGTATTGGCCAAGTATAATGACAAAGGACAGCTGCTAGAGCATCACTCCTTCTGTGGCAGTGAGTATGGATCCCTAGTGGTTATGTATACAGAATCTCTGCTCTCAATTCCTGGTGGTGACGGTGGTCAACCTAAGAAGATGATACGAAGAAGAAGAAGGAGGTCTTGA

Protein sequence

>MS.gene44892.t1

METMKKTELYLPLVLIFQILLMLPVKSLICFKCVCKSWFSIISDTNFANSHFQLTAKTHTPRILLITPNLESLSIDFETSLYDDSASYSSNISFLLPQSFTELDIKGSCRGFILLSCGSCLCLWNPSTGVHKFIPNSLIDCNLDAYHLYGFGYDESRDDYLVLSMSYDPNDYDKLTRLGLFSLRANAWNEIEGDNCFPYCLARENSKVEPLLNGAIHFLNGAIHWLALSYDILTNVILAYHLMQRELLELPLPADITSGSSKVYDLWVFRGCLSLWDMAHDNGTVEIWVMEKYNVKSSWTKTLVLSFDGIPTHYFCPTYGTKSGDIVGTDAGNVLAKYNDKGQLLEHHSFCGSEYGSLVVMYTESLLSIPGGDGGQPKKMIRRRRRRS