AlfalfaGEDB | MS.gene57531

M. sativa cultivar XinJiangDaYe / MS.gene57531

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57531.t1	AET02110.2	77.7	130	25	1	1	126	235	364	1.70E-49	205.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57531.t1	G7LCP3	77.7	130	25	1	1	126	235	364	1.2e-49	205.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene57531	MS.gene40988	PPI
MS.gene57531	MS.gene24173	PPI
MS.gene57531	MS.gene036584	PPI
MS.gene57531	MS.gene036662	PPI
MS.gene58716	MS.gene57531	PPI
MS.gene033444	MS.gene57531	PPI
MS.gene019505	MS.gene57531	PPI
MS.gene50306	MS.gene57531	PPI
MS.gene58785	MS.gene57531	PPI
MS.gene57531	MS.gene035261	PPI
MS.gene57531	MS.gene023999	PPI
MS.gene26949	MS.gene57531	PPI
MS.gene57531	MS.gene69307	PPI
MS.gene036760	MS.gene57531	PPI
MS.gene58311	MS.gene57531	PPI
MS.gene57531	MS.gene036581	PPI
MS.gene57531	MS.gene019507	PPI
MS.gene57527	MS.gene57531	PPI
MS.gene033432	MS.gene57531	PPI
MS.gene57531	MS.gene000036	PPI
MS.gene033426	MS.gene57531	PPI
MS.gene57531	MS.gene50320	PPI
MS.gene59639	MS.gene57531	PPI
MS.gene57531	MS.gene58314	PPI
MS.gene57531	MS.gene87557	PPI
MS.gene57531	MS.gene51199	PPI
MS.gene57531	MS.gene035263	PPI
MS.gene67687	MS.gene57531	PPI
MS.gene57531	MS.gene67501	PPI
MS.gene57531	MS.gene96406	PPI
MS.gene57531	MS.gene27285	PPI
MS.gene57531	MS.gene77858	PPI
MS.gene57531	MS.gene51201	PPI
MS.gene063670	MS.gene57531	PPI
MS.gene57531	MS.gene50336	PPI
MS.gene57531	MS.gene57526	PPI
MS.gene019506	MS.gene57531	PPI
MS.gene57531	MS.gene77704	PPI
MS.gene50326	MS.gene57531	PPI
MS.gene69309	MS.gene57531	PPI
MS.gene57531	MS.gene047279	PPI
MS.gene57531	MS.gene060370	PPI
MS.gene57531	MS.gene50305	PPI
MS.gene57531	MS.gene024002	PPI
MS.gene57531	MS.gene032969	PPI
MS.gene57531	MS.gene68890	PPI
MS.gene034686	MS.gene57531	PPI
MS.gene57531	MS.gene42445	PPI
MS.gene42452	MS.gene57531	PPI
MS.gene57531	MS.gene86273	PPI
MS.gene57531	MS.gene26830	PPI
MS.gene57531	MS.gene40985	PPI
MS.gene063414	MS.gene57531	PPI
MS.gene57531	MS.gene038756	PPI
MS.gene57531	MS.gene51207	PPI
MS.gene57531	MS.gene63657	PPI
MS.gene57531	MS.gene059157	PPI
MS.gene57531	MS.gene023996	PPI
MS.gene87563	MS.gene57531	PPI
MS.gene57531	MS.gene045473	PPI
MS.gene57526	MS.gene57531	PPI
MS.gene57531	MS.gene50301	PPI
MS.gene57531	MS.gene070462	PPI
MS.gene57531	MS.gene54049	PPI
MS.gene57531	MS.gene031590	PPI
MS.gene051820	MS.gene57531	PPI
MS.gene97996	MS.gene57531	PPI
MS.gene81242	MS.gene57531	PPI
MS.gene26101	MS.gene57531	PPI
MS.gene57531	MS.gene066623	PPI
MS.gene27283	MS.gene57531	PPI
MS.gene57531	MS.gene064086	PPI
MS.gene64203	MS.gene57531	PPI
MS.gene57531	MS.gene035234	PPI
MS.gene57531	MS.gene064090	PPI
MS.gene42444	MS.gene57531	PPI
MS.gene51202	MS.gene57531	PPI
MS.gene57531	MS.gene90742	PPI
MS.gene57531	MS.gene24212	PPI
MS.gene57531	MS.gene066639	PPI
MS.gene87562	MS.gene57531	PPI
MS.gene57531	MS.gene50332	PPI
MS.gene57531	MS.gene024979	PPI
MS.gene57531	MS.gene64203	PPI
MS.gene57531	MS.gene24826	PPI
MS.gene87569	MS.gene57531	PPI
MS.gene064104	MS.gene57531	PPI
MS.gene57531	MS.gene43790	PPI
MS.gene57531	MS.gene032970	PPI
MS.gene041491	MS.gene57531	PPI
MS.gene57531	MS.gene40982	PPI
MS.gene059096	MS.gene57531	PPI
MS.gene57528	MS.gene57531	PPI
MS.gene57531	MS.gene59637	PPI
MS.gene006711	MS.gene57531	PPI
MS.gene57531	MS.gene27022	PPI
MS.gene57531	MS.gene88416	PPI
MS.gene57531	MS.gene57530	PPI
MS.gene064091	MS.gene57531	PPI
MS.gene045476	MS.gene57531	PPI
MS.gene57531	MS.gene003076	PPI
MS.gene57531	MS.gene87585	PPI
MS.gene50307	MS.gene57531	PPI
MS.gene43796	MS.gene57531	PPI
MS.gene034690	MS.gene57531	PPI
MS.gene57531	MS.gene024009	PPI
MS.gene57531	MS.gene036599	PPI
MS.gene57531	MS.gene40887	PPI
MS.gene57531	MS.gene42444	PPI
MS.gene57531	MS.gene26101	PPI
MS.gene57531	MS.gene006705	PPI
MS.gene57531	MS.gene061241	PPI
MS.gene77857	MS.gene57531	PPI
MS.gene57531	MS.gene035237	PPI
MS.gene51191	MS.gene57531	PPI
MS.gene57531	MS.gene51188	PPI
MS.gene57531	MS.gene033875	PPI
MS.gene57531	MS.gene38220	PPI
MS.gene57531	MS.gene40986	PPI
MS.gene57531	MS.gene50309	PPI
MS.gene57531	MS.gene041394	PPI
MS.gene50298	MS.gene57531	PPI
MS.gene57531	MS.gene03060	PPI
MS.gene57531	MS.gene033440	PPI
MS.gene57531	MS.gene036664	PPI
MS.gene57531	MS.gene024011	PPI
MS.gene57531	MS.gene053257	PPI
MS.gene036583	MS.gene57531	PPI
MS.gene57531	MS.gene58241	PPI
MS.gene88780	MS.gene57531	PPI
MS.gene57531	MS.gene064109	PPI
MS.gene57531	MS.gene058696	PPI
MS.gene57531	MS.gene009893	PPI
MS.gene57531	MS.gene045475	PPI
MS.gene57531	MS.gene85043	PPI
MS.gene71159	MS.gene57531	PPI
MS.gene96448	MS.gene57531	PPI
MS.gene058692	MS.gene57531	PPI
MS.gene041392	MS.gene57531	PPI
MS.gene57531	MS.gene062698	PPI
MS.gene63658	MS.gene57531	PPI
MS.gene033081	MS.gene57531	PPI
MS.gene57531	MS.gene033083	PPI
MS.gene031591	MS.gene57531	PPI
MS.gene57531	MS.gene40886	PPI
MS.gene070461	MS.gene57531	PPI
MS.gene57531	MS.gene033081	PPI
MS.gene57531	MS.gene036663	PPI
MS.gene57531	MS.gene68580	PPI
MS.gene57531	MS.gene041391	PPI
MS.gene019503	MS.gene57531	PPI
MS.gene57531	MS.gene57525	PPI
MS.gene87559	MS.gene57531	PPI
MS.gene57531	MS.gene030114	PPI
MS.gene57531	MS.gene88774	PPI
MS.gene57531	MS.gene045474	PPI
MS.gene57531	MS.gene036558	PPI
MS.gene041475	MS.gene57531	PPI
MS.gene033441	MS.gene57531	PPI
MS.gene57531	MS.gene87554	PPI
MS.gene57531	MS.gene009891	PPI
MS.gene57531	MS.gene27051	PPI
MS.gene57531	MS.gene40984	PPI
MS.gene57531	MS.gene064108	PPI
MS.gene063826	MS.gene57531	PPI
MS.gene57531	MS.gene016220	PPI
MS.gene57531	MS.gene24208	PPI
MS.gene57531	MS.gene58317	PPI
MS.gene57531	MS.gene063670	PPI
MS.gene44892	MS.gene57531	PPI
MS.gene58239	MS.gene57531	PPI
MS.gene064111	MS.gene57531	PPI
MS.gene57531	MS.gene58240	PPI
MS.gene57531	MS.gene27284	PPI
MS.gene26829	MS.gene57531	PPI
MS.gene39262	MS.gene57531	PPI
MS.gene57531	MS.gene063472	PPI
MS.gene053256	MS.gene57531	PPI
MS.gene57531	MS.gene57717	PPI
MS.gene57531	MS.gene034680	PPI
MS.gene57531	MS.gene27021	PPI
MS.gene75875	MS.gene57531	PPI
MS.gene57531	MS.gene48221	PPI
MS.gene57531	MS.gene044563	PPI
MS.gene058694	MS.gene57531	PPI
MS.gene57531	MS.gene50327	PPI
MS.gene54049	MS.gene57531	PPI
MS.gene57531	MS.gene066626	PPI
MS.gene43789	MS.gene57531	PPI
MS.gene57531	MS.gene063474	PPI
MS.gene57531	MS.gene51190	PPI
MS.gene006710	MS.gene57531	PPI
MS.gene57531	MS.gene71159	PPI
MS.gene57531	MS.gene044426	PPI
MS.gene072177	MS.gene57531	PPI
MS.gene58722	MS.gene57531	PPI
MS.gene57531	MS.gene034681	PPI
MS.gene57531	MS.gene57532	PPI
MS.gene57531	MS.gene033442	PPI
MS.gene64001	MS.gene57531	PPI
MS.gene57531	MS.gene009892	PPI
MS.gene58312	MS.gene57531	PPI
MS.gene36704	MS.gene57531	PPI
MS.gene032970	MS.gene57531	PPI
MS.gene57531	MS.gene058669	PPI
MS.gene57531	MS.gene066120	PPI
MS.gene77856	MS.gene57531	PPI
MS.gene57531	MS.gene51192	PPI
MS.gene58313	MS.gene57531	PPI
MS.gene57531	MS.gene041489	PPI
MS.gene066622	MS.gene57531	PPI
MS.gene44887	MS.gene57531	PPI
MS.gene63655	MS.gene57531	PPI
MS.gene57531	MS.gene36704	PPI
MS.gene57531	MS.gene024000	PPI
MS.gene44883	MS.gene57531	PPI
MS.gene57531	MS.gene034688	PPI
MS.gene57531	MS.gene24213	PPI
MS.gene57531	MS.gene31637	PPI
MS.gene57531	MS.gene033079	PPI
MS.gene41046	MS.gene57531	PPI
MS.gene57531	MS.gene034677	PPI
MS.gene87588	MS.gene57531	PPI
MS.gene017412	MS.gene57531	PPI
MS.gene57531	MS.gene055694	PPI
MS.gene57531	MS.gene059101	PPI
MS.gene57531	MS.gene035238	PPI
MS.gene80884	MS.gene57531	PPI
MS.gene57531	MS.gene064114	PPI
MS.gene57531	MS.gene87584	PPI
MS.gene009883	MS.gene57531	PPI
MS.gene57531	MS.gene58315	PPI
MS.gene069075	MS.gene57531	PPI
MS.gene57531	MS.gene80610	PPI
MS.gene033427	MS.gene57531	PPI
MS.gene57531	MS.gene90743	PPI
MS.gene041474	MS.gene57531	PPI
MS.gene27020	MS.gene57531	PPI
MS.gene57531	MS.gene85454	PPI
MS.gene57531	MS.gene064112	PPI
MS.gene041388	MS.gene57531	PPI
MS.gene96126	MS.gene57531	PPI
MS.gene51208	MS.gene57531	PPI
MS.gene57531	MS.gene033443	PPI
MS.gene57531	MS.gene060367	PPI
MS.gene016524	MS.gene57531	PPI
MS.gene50304	MS.gene57531	PPI
MS.gene57531	MS.gene57536	PPI
MS.gene045475	MS.gene57531	PPI
MS.gene57531	MS.gene51200	PPI
MS.gene57531	MS.gene021553	PPI
MS.gene88776	MS.gene57531	PPI
MS.gene90744	MS.gene57531	PPI
MS.gene51204	MS.gene57531	PPI
MS.gene57531	MS.gene44887	PPI
MS.gene57531	MS.gene058701	PPI
MS.gene31587	MS.gene57531	PPI
MS.gene036557	MS.gene57531	PPI
MS.gene041393	MS.gene57531	PPI
MS.gene57531	MS.gene064083	PPI
MS.gene57531	MS.gene048193	PPI
MS.gene57531	MS.gene58783	PPI
MS.gene57531	MS.gene024420	PPI
MS.gene57531	MS.gene57533	PPI
MS.gene57531	MS.gene024008	PPI
MS.gene57531	MS.gene50337	PPI
MS.gene059156	MS.gene57531	PPI
MS.gene84698	MS.gene57531	PPI
MS.gene57531	MS.gene54541	PPI
MS.gene57531	MS.gene39265	PPI
MS.gene57531	MS.gene041393	PPI
MS.gene57531	MS.gene060368	PPI
MS.gene57531	MS.gene053299	PPI
MS.gene066641	MS.gene57531	PPI
MS.gene82082	MS.gene57531	PPI
MS.gene57531	MS.gene28758	PPI
MS.gene57531	MS.gene044429	PPI
MS.gene57531	MS.gene42451	PPI
MS.gene000038	MS.gene57531	PPI
MS.gene57531	MS.gene50304	PPI
MS.gene57531	MS.gene019503	PPI
MS.gene57535	MS.gene57531	PPI
MS.gene025887	MS.gene57531	PPI
MS.gene041470	MS.gene57531	PPI
MS.gene87200	MS.gene57531	PPI
MS.gene57531	MS.gene033431	PPI
MS.gene015089	MS.gene57531	PPI
MS.gene57531	MS.gene58319	PPI
MS.gene57531	MS.gene034762	PPI
MS.gene57531	MS.gene59943	PPI
MS.gene44885	MS.gene57531	PPI
MS.gene011679	MS.gene57531	PPI
MS.gene066635	MS.gene57531	PPI
MS.gene57533	MS.gene57531	PPI
MS.gene57531	MS.gene035262	PPI
MS.gene010758	MS.gene57531	PPI
MS.gene57531	MS.gene028390	PPI
MS.gene87586	MS.gene57531	PPI
MS.gene57531	MS.gene40878	PPI
MS.gene57531	MS.gene44428	PPI
MS.gene57531	MS.gene96407	PPI
MS.gene57531	MS.gene035235	PPI
MS.gene57531	MS.gene058703	PPI
MS.gene50339	MS.gene57531	PPI
MS.gene57531	MS.gene57528	PPI
MS.gene57531	MS.gene012215	PPI
MS.gene060366	MS.gene57531	PPI
MS.gene57531	MS.gene50297	PPI
MS.gene57529	MS.gene57531	PPI
MS.gene57531	MS.gene22715	PPI
MS.gene57531	MS.gene58316	PPI
MS.gene57531	MS.gene033430	PPI
MS.gene57531	MS.gene58321	PPI
MS.gene57531	MS.gene87564	PPI
MS.gene57531	MS.gene36595	PPI
MS.gene40902	MS.gene57531	PPI
MS.gene57531	MS.gene024004	PPI
MS.gene57531	MS.gene045140	PPI
MS.gene57531	MS.gene061240	PPI
MS.gene021553	MS.gene57531	PPI
MS.gene26957	MS.gene57531	PPI
MS.gene036582	MS.gene57531	PPI
MS.gene27021	MS.gene57531	PPI
MS.gene57531	MS.gene041473	PPI
MS.gene066620	MS.gene57531	PPI
MS.gene035236	MS.gene57531	PPI
MS.gene58320	MS.gene57531	PPI
MS.gene57531	MS.gene50311	PPI
MS.gene57531	MS.gene058989	PPI
MS.gene57531	MS.gene036556	PPI
MS.gene57531	MS.gene57538	PPI
MS.gene57531	MS.gene041468	PPI
MS.gene58781	MS.gene57531	PPI
MS.gene57531	MS.gene058693	PPI
MS.gene57531	MS.gene27319	PPI
MS.gene011106	MS.gene57531	PPI
MS.gene57531	MS.gene015089	PPI
MS.gene62398	MS.gene57531	PPI
MS.gene60027	MS.gene57531	PPI
MS.gene57531	MS.gene041395	PPI
MS.gene44886	MS.gene57531	PPI
MS.gene57531	MS.gene42447	PPI
MS.gene57531	MS.gene51189	PPI
MS.gene40904	MS.gene57531	PPI
MS.gene35068	MS.gene57531	PPI
MS.gene041390	MS.gene57531	PPI
MS.gene92376	MS.gene57531	PPI
MS.gene57531	MS.gene046958	PPI
MS.gene000035	MS.gene57531	PPI
MS.gene50329	MS.gene57531	PPI
MS.gene57531	MS.gene24286	PPI
MS.gene57531	MS.gene044425	PPI
MS.gene31637	MS.gene57531	PPI
MS.gene87573	MS.gene57531	PPI
MS.gene57537	MS.gene57531	PPI
MS.gene019504	MS.gene57531	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57531.t1	MTR_8g433040	77.692	130	25	1	1	126	235	364	2.24e-64	199
MS.gene57531.t1	MTR_8g032380	77.692	130	25	1	1	126	235	364	2.24e-64	199
MS.gene57531.t1	MTR_8g433030	76.000	125	25	2	1	120	212	336	2.51e-58	183
MS.gene57531.t1	MTR_8g032390	76.000	125	25	2	1	120	245	369	5.18e-58	183
MS.gene57531.t1	MTR_3g103020	63.158	133	42	2	1	126	246	378	2.79e-48	159
MS.gene57531.t1	MTR_4g094365	62.500	136	39	4	1	126	231	364	1.90e-46	153
MS.gene57531.t1	MTR_6g060650	57.576	132	47	3	1	125	243	372	8.13e-44	147
MS.gene57531.t1	MTR_4g116330	57.778	135	48	2	1	126	246	380	9.75e-43	144
MS.gene57531.t1	MTR_4g109270	57.895	133	49	2	1	126	232	364	5.07e-42	142
MS.gene57531.t1	MTR_4g122850	62.500	136	38	6	1	126	232	364	8.16e-42	142
MS.gene57531.t1	MTR_8g040935	56.716	134	49	2	2	126	75	208	3.88e-41	135
MS.gene57531.t1	MTR_4g117720	58.647	133	41	4	1	121	242	372	1.90e-40	138
MS.gene57531.t1	MTR_1g055175	55.303	132	51	3	1	125	70	200	3.41e-40	133
MS.gene57531.t1	MTR_4g023130	57.692	130	49	2	1	125	184	312	4.95e-40	135
MS.gene57531.t1	MTR_6g463430	55.039	129	55	2	1	126	74	202	5.48e-40	132
MS.gene57531.t1	MTR_4g109280	57.778	135	45	5	1	126	228	359	8.38e-40	136
MS.gene57531.t1	MTR_4g023380	52.258	155	45	4	1	126	225	379	2.00e-39	135
MS.gene57531.t1	MTR_5g097210	59.690	129	42	4	2	123	235	360	3.37e-39	135
MS.gene57531.t1	MTR_4g116320	58.462	130	45	3	1	122	126	254	6.40e-39	131
MS.gene57531.t1	MTR_4g023090	53.061	147	48	4	1	126	240	386	1.68e-38	133
MS.gene57531.t1	MTR_3g034180	55.970	134	47	5	1	126	360	489	1.89e-38	135
MS.gene57531.t1	MTR_1g055165	54.887	133	52	3	1	126	187	318	2.08e-38	131
MS.gene57531.t1	MTR_4g023080	55.385	130	52	2	1	125	225	353	5.82e-38	131
MS.gene57531.t1	MTR_4g021785	54.198	131	54	2	1	126	226	355	1.46e-37	130
MS.gene57531.t1	MTR_4g117870	54.688	128	51	3	5	126	141	267	5.04e-36	124
MS.gene57531.t1	MTR_4g117850	54.762	126	49	2	2	119	248	373	1.68e-35	125
MS.gene57531.t1	MTR_4g023070	50.000	142	53	2	2	125	228	369	3.79e-35	124
MS.gene57531.t1	MTR_4g023120	48.951	143	55	2	2	126	228	370	3.40e-34	122
MS.gene57531.t1	MTR_1g055135	53.285	137	51	6	1	126	241	375	3.46e-34	122
MS.gene57531.t1	MTR_5g070130	54.688	128	50	3	1	120	243	370	3.78e-34	122
MS.gene57531.t1	MTR_4g118360	53.543	127	48	4	8	125	1	125	4.48e-34	115
MS.gene57531.t1	MTR_4g023190	53.383	133	53	3	1	124	225	357	1.59e-33	120
MS.gene57531.t1	MTR_4g118370	54.264	129	50	4	1	123	132	257	3.49e-33	116
MS.gene57531.t1	MTR_4g118380	58.407	113	31	3	1	99	245	355	3.65e-33	119
MS.gene57531.t1	MTR_5g070080	53.383	133	53	4	2	126	255	386	4.62e-32	116
MS.gene57531.t1	MTR_4g023150	51.128	133	56	3	1	124	226	358	9.00e-32	115
MS.gene57531.t1	MTR_3g034130	56.311	103	38	2	1	98	246	346	2.69e-31	114
MS.gene57531.t1	MTR_5g023000	60.606	99	32	2	35	126	1	99	3.51e-31	107
MS.gene57531.t1	MTR_4g117750	56.881	109	40	2	23	124	373	481	4.39e-31	115
MS.gene57531.t1	MTR_4g117750	50.000	108	47	3	23	125	253	358	2.02e-21	88.6
MS.gene57531.t1	MTR_4g023200	50.376	133	57	3	1	124	226	358	9.44e-31	112
MS.gene57531.t1	MTR_1g055195	51.852	135	44	6	1	122	348	474	1.03e-30	114
MS.gene57531.t1	MTR_3g034160	55.725	131	50	3	1	125	246	374	2.65e-30	111
MS.gene57531.t1	MTR_4g122860	50.000	128	50	3	10	126	196	320	4.66e-30	110
MS.gene57531.t1	MTR_4g117780	54.464	112	44	2	22	126	256	367	4.66e-30	110
MS.gene57531.t1	MTR_4g117770	54.464	112	44	2	22	126	256	367	6.25e-30	110
MS.gene57531.t1	MTR_4g117810	54.464	112	44	2	22	126	256	367	6.25e-30	110
MS.gene57531.t1	MTR_4g116330	54.867	113	42	2	23	126	229	341	4.43e-29	107
MS.gene57531.t1	MTR_1g055250	52.137	117	48	3	2	113	140	253	3.57e-28	105
MS.gene57531.t1	MTR_7g079400	48.905	137	56	4	2	126	203	337	1.63e-27	103
MS.gene57531.t1	MTR_7g079450	46.565	131	60	4	2	126	11	137	6.78e-27	97.4
MS.gene57531.t1	MTR_4g118400	50.000	126	42	3	2	120	183	294	3.06e-26	99.8
MS.gene57531.t1	MTR_4g121580	49.123	114	53	2	4	116	230	339	3.32e-26	100
MS.gene57531.t1	MTR_4g117530	48.305	118	53	3	14	126	139	253	9.32e-26	97.4
MS.gene57531.t1	MTR_4g023440	59.341	91	32	1	41	126	242	332	1.38e-25	98.6
MS.gene57531.t1	MTR_5g070088	45.926	135	64	4	1	126	252	386	2.69e-25	98.6
MS.gene57531.t1	MTR_8g102520	44.361	133	64	4	2	126	192	322	1.31e-24	95.9
MS.gene57531.t1	MTR_7g079370	46.457	127	59	4	2	121	227	351	2.57e-23	92.8
MS.gene57531.t1	MTR_4g023430	46.154	104	46	2	33	126	119	222	8.36e-21	84.0
MS.gene57531.t1	MTR_4g122840	42.400	125	39	4	5	126	170	264	1.64e-20	84.0
MS.gene57531.t1	MTR_7g117720	56.322	87	27	3	46	121	186	272	4.11e-20	83.2
MS.gene57531.t1	MTR_8g098830	41.935	124	62	5	2	120	97	215	5.69e-20	82.0
MS.gene57531.t1	MTR_7g079420	41.791	134	67	6	2	126	1013	1144	1.48e-17	77.8
MS.gene57531.t1	MTR_4g114700	50.575	87	33	3	41	117	132	218	5.57e-16	71.6
MS.gene57531.t1	MTR_4g023100	61.818	55	21	0	72	126	65	119	8.14e-15	65.9
MS.gene57531.t1	MTR_2g048580	36.641	131	69	6	2	126	220	342	1.03e-13	66.2
MS.gene57531.t1	MTR_8g013005	59.649	57	21	1	72	126	3	59	2.52e-13	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 28 sgRNAs with CRISPR-Local

Find 33 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATTATGGTTTGTGGGTATT+TGG	0.222701	8.3:-62060398	MS.gene57531:CDS
ATAATTGGGCAGTTGAAATA+TGG	0.222963	8.3:-62060343	MS.gene57531:CDS
AACCATGATCCTGTGCATTA+TGG	0.250864	8.3:-62060413	MS.gene57531:CDS
TTGGAGAATTTCTTAGTCTA+TGG	0.272823	8.3:-62060379	MS.gene57531:CDS
ATGGCCACTTCAAATGCATT+TGG	0.358614	8.3:+62060146	None:intergenic
AGTATATAGGGGAAAAGTTA+AGG	0.407366	8.3:+62060264	None:intergenic
ATCCTGTGCATTATGGTTTG+TGG	0.434302	8.3:-62060406	MS.gene57531:CDS
TTGGTGAAGTATAATATTAA+AGG	0.434508	8.3:-62060197	MS.gene57531:CDS
ACTGTTAGAGATACCTCTTC+CGG	0.452548	8.3:-62060444	MS.gene57531:CDS
TAATTGGGCAGTTGAAATAT+GGG	0.461070	8.3:-62060342	MS.gene57531:CDS
TCCTGTGCATTATGGTTTGT+GGG	0.467589	8.3:-62060405	MS.gene57531:CDS
TAAACTTGCTCACGGTCACT+AGG	0.478802	8.3:+62060098	None:intergenic
GGATCATGGTTAAAATCATC+CGG	0.492599	8.3:+62060425	None:intergenic
AATACAAACAACATTCGTCT+TGG	0.503398	8.3:-62060310	MS.gene57531:CDS
TTGTCTTTGATTTAATGGAA+AGG	0.526787	8.3:-62060469	None:intergenic
AACTGATGGTGGTCGTGGAT+TGG	0.526792	8.3:-62060216	MS.gene57531:CDS
AGTTGAAATATGGGTGATGA+AGG	0.529420	8.3:-62060333	MS.gene57531:CDS
GTTGGAACTGATGGTGGTCG+TGG	0.543560	8.3:-62060221	MS.gene57531:CDS
AACCATAATGCACAGGATCA+TGG	0.559016	8.3:+62060411	None:intergenic
ATAGGGGAAAAGTTAAGGCT+AGG	0.562080	8.3:+62060269	None:intergenic
GAATCCAAATGCATTTGAAG+TGG	0.564657	8.3:-62060150	MS.gene57531:CDS
AAGCAGAGACTCTGTATACA+TGG	0.569558	8.3:+62060127	None:intergenic
TGGTTAAAATCATCCGGAAG+AGG	0.573708	8.3:+62060431	None:intergenic
ACCCACAAACCATAATGCAC+AGG	0.579215	8.3:+62060404	None:intergenic
GGTGATATTGTTGGAACTGA+TGG	0.579963	8.3:-62060230	MS.gene57531:CDS
AAACTTGCTCACGGTCACTA+GGG	0.598587	8.3:+62060099	None:intergenic
TATCTTGTTAAACTTGCTCA+CGG	0.621078	8.3:+62060090	None:intergenic
GATATTGTTGGAACTGATGG+TGG	0.641384	8.3:-62060227	MS.gene57531:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GAATTTGAATTTTCATAATT+GGG	-	chr8.3:62060195-62060214	MS.gene57531:CDS	15.0%
!!	TTGGTGAAGTATAATATTAA+AGG	-	chr8.3:62060355-62060374	MS.gene57531:CDS	20.0%
!!!	GGAATTTGAATTTTCATAAT+TGG	-	chr8.3:62060194-62060213	MS.gene57531:CDS	20.0%
!!	ACTTTTTGTAGAGTATATAG+GGG	+	chr8.3:62060302-62060321	None:intergenic	25.0%
!!!	CACTTTTTGTAGAGTATATA+GGG	+	chr8.3:62060303-62060322	None:intergenic	25.0%
	AATACAAACAACATTCGTCT+TGG	-	chr8.3:62060242-62060261	MS.gene57531:CDS	30.0%
	ACAAAAAGTGGTGATATTGT+TGG	-	chr8.3:62060313-62060332	MS.gene57531:CDS	30.0%
	AGTATATAGGGGAAAAGTTA+AGG	+	chr8.3:62060291-62060310	None:intergenic	30.0%
	ATAATTGGGCAGTTGAAATA+TGG	-	chr8.3:62060209-62060228	MS.gene57531:CDS	30.0%
	CCTATATACTCTACAAAAAG+TGG	-	chr8.3:62060301-62060320	MS.gene57531:CDS	30.0%
	TAATTGGGCAGTTGAAATAT+GGG	-	chr8.3:62060210-62060229	MS.gene57531:CDS	30.0%
	TTGGAGAATTTCTTAGTCTA+TGG	-	chr8.3:62060173-62060192	MS.gene57531:CDS	30.0%
!!!	CCACTTTTTGTAGAGTATAT+AGG	+	chr8.3:62060304-62060323	None:intergenic	30.0%
	AGTTGAAATATGGGTGATGA+AGG	-	chr8.3:62060219-62060238	MS.gene57531:CDS	35.0%
	GAATCCAAATGCATTTGAAG+TGG	-	chr8.3:62060402-62060421	MS.gene57531:CDS	35.0%
	GGATCATGGTTAAAATCATC+CGG	+	chr8.3:62060130-62060149	None:intergenic	35.0%
!	CATTATGGTTTGTGGGTATT+TGG	-	chr8.3:62060154-62060173	MS.gene57531:CDS	35.0%
	AACCATAATGCACAGGATCA+TGG	+	chr8.3:62060144-62060163	None:intergenic	40.0%
	AACCATGATCCTGTGCATTA+TGG	-	chr8.3:62060139-62060158	MS.gene57531:CDS	40.0%
	AAGCAGAGACTCTGTATACA+TGG	+	chr8.3:62060428-62060447	None:intergenic	40.0%
	ACTGTTAGAGATACCTCTTC+CGG	-	chr8.3:62060108-62060127	MS.gene57531:CDS	40.0%
	ATAGGGGAAAAGTTAAGGCT+AGG	+	chr8.3:62060286-62060305	None:intergenic	40.0%
	ATCCTGTGCATTATGGTTTG+TGG	-	chr8.3:62060146-62060165	MS.gene57531:CDS	40.0%
	ATGGCCACTTCAAATGCATT+TGG	+	chr8.3:62060409-62060428	None:intergenic	40.0%
	GATATTGTTGGAACTGATGG+TGG	-	chr8.3:62060325-62060344	MS.gene57531:CDS	40.0%
	GGTGATATTGTTGGAACTGA+TGG	-	chr8.3:62060322-62060341	MS.gene57531:CDS	40.0%
	TGGTTAAAATCATCCGGAAG+AGG	+	chr8.3:62060124-62060143	None:intergenic	40.0%
!	TCCTGTGCATTATGGTTTGT+GGG	-	chr8.3:62060147-62060166	MS.gene57531:CDS	40.0%
	ACCCACAAACCATAATGCAC+AGG	+	chr8.3:62060151-62060170	None:intergenic	45.0%
!	AAACTTGCTCACGGTCACTA+GGG	+	chr8.3:62060456-62060475	None:intergenic	45.0%
!	TAAACTTGCTCACGGTCACT+AGG	+	chr8.3:62060457-62060476	None:intergenic	45.0%
!!	AACTGATGGTGGTCGTGGAT+TGG	-	chr8.3:62060336-62060355	MS.gene57531:CDS	50.0%
!!	GTTGGAACTGATGGTGGTCG+TGG	-	chr8.3:62060331-62060350	MS.gene57531:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	62060097	62060477	62060097	ID=MS.gene57531
chr8.3	mRNA	62060097	62060477	62060097	ID=MS.gene57531.t1;Parent=MS.gene57531
chr8.3	exon	62060097	62060477	62060097	ID=MS.gene57531.t1.exon1;Parent=MS.gene57531.t1
chr8.3	CDS	62060097	62060477	62060097	ID=cds.MS.gene57531.t1;Parent=MS.gene57531.t1

Gene Sequence

>MS.gene57531

ATGGAAAGGAAACTGTTAGAGATACCTCTTCCGGATGATTTTAACCATGATCCTGTGCATTATGGTTTGTGGGTATTTGGAGAATTTCTTAGTCTATGGAATTTGAATTTTCATAATTGGGCAGTTGAAATATGGGTGATGAAGGAATACAAACAACATTCGTCTTGGACTAAGTCTCTTGTAATTCCTAGCCTTAACTTTTCCCCTATATACTCTACAAAAAGTGGTGATATTGTTGGAACTGATGGTGGTCGTGGATTGGTGAAGTATAATATTAAAGGACAGCTGTTAGAGTATCTTGAAATGAATCCAAATGCATTTGAAGTGGCCATGTATACAGAGTCTCTGCTTTCACTCCCTAGTGACCGTGAGCAAGTTTAA

Protein sequence

>MS.gene57531.t1

MERKLLEIPLPDDFNHDPVHYGLWVFGEFLSLWNLNFHNWAVEIWVMKEYKQHSSWTKSLVIPSLNFSPIYSTKSGDIVGTDGGRGLVKYNIKGQLLEYLEMNPNAFEVAMYTESLLSLPSDREQV